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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017537 ID=TCONS_00017537|Name=TCONS_00017537|organism=Clytia hemisphaerica|type=transcript|length=762bp
aatagaccttatcggagtttttgatttttctaaaaaagcgatgcattgtg
ggattattttgagtgtattacaatagaattccctcgaggaattcctaaga
gatttctattgtaacacactcgaaacaatcccacgatgcatcgctttttt
agaaaaatcaaaaactccgataaggtctattgccaTTGTCCCAGAATAAA
TCGGAATTGTTTCGATTGATTTAATCCTAGTTTTAATGTCTAttctattt
tgttgtttttcagaCATCAGAAACAAGCAAAACGGACGTTTCCGGCCTTT
CACAAGCGACCGGTGGTGGTGGAACAGCGGAACCCTCTCTAGACGGTGTG
CCGGTCGACGAAAGTTTGTTCCAGGACCTTGACCTTGACGATCTTGATAT
TGATGACGAGTGAAAGATTTTTTGTCCATCGGTAGATAAGGCGTCCAGAA
AATGAAGAGGGAGTTGAGTTGTACCAGATATTTGTTATTGGGGAGTTATG
AATAAACTCTTACCACAATAATTTCGTAAGATTACAGtttattttataaa
actttTTGTAACTCACGTCAACTGTCTTCGTACtatactgaaaatgaaaa
tacacaACCTTATATGACGACAAAAAATCGACTGAATTACTGCTCTACAA
TAAAAAGATAAACAACTAGATCGCGTCTTTTGACCCTTTCAGGTCGATTG
GACCACCGTGTTGCCGGGTGACCTTAGTATTTCCATCGATGGTATTTCCA
AGAGACTTAAAG Run BLAST on NCBI transcript from alignment at sc0000269:59766..60902- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017537 ID=TCONS_00017537|Name=TCONS_00017537|organism=Clytia hemisphaerica|type=transcript|length=1137bp|location=Sequence derived from alignment at sc0000269:59766..60902- (Clytia hemisphaerica)
AATAGACCTTATCGGAGTTTTTGATTTTTCTAAAAAAGCGATGCATTGTG
GGATTATTTTGAGTGTATTACAATAGAATTCCCTCGAGGAATTCCTAAGA
GATTTCTATTGTAACACACTCGAAACAATCCCACGATGCATCGCTTTTTT
AGAAAAATCAAAAACTCCGATAAGGTCTATTGCCATTGTCCCAGAATAAA
TCGGAATTGTTTCGATTGATTTAATCCTAGTTTTAATGTCTATTCTATTT
TGTTGTTTTTCAGACATCAGAAACAAGCAAAACGGACGTTTCCGGCCTTT
CACAAGCGACCGGTGGTGGTGGAACAGCGGAACCCTCTCTAGACGGTGTG
CCGGTCGACGAAAGTTTGTTCCAGGACCTTGACCTTGACGATCTTGATAT
TGATGACGAGTGAAAGATTTTTTGTCCATCGGTAGATAAGGTCTTATTTT
TACTTTCGGTTTTTCTATAAATAAATTTTATTATTTTTGAAATTAAAATT
AACGTCCTTTTTTCAATGAGGGGTTGGAAAGGAAAAAGGAATAGAGACGA
AAAAAGTTCGAATTACAGTTGCATATCGGTTAAAAAAATGGGTGTGAGGG
CGAGCAATATTTTGAATTAATGTTTATTATGGATTCACGATTTGAAGAGA
AACTTTTTTCAAAAAATAAAATATTGAAATTTTTAGGCGTCCAGAAAATG
AAGAGGGAGTTGAGTTGTTATTGGGGAGTTATGAATAAACTCTTACCACA
ATAATTTCGTAAGATTACAGTTTATTTTATAAAACTTTTTGTAACTCACG
TCAACTNATTTTTAGGCGTCCAGAAAATGAAGAGGGAGTTGAGTTGTACC
AGATATTTGTTATTGGGGAGTTATGAATAAACTCTTACCACAATAATTTC
GTAAGATTACAGTTTATTTTATAAAACTTTTTGTAACTCACGTCAACTGT
CTTCGTACTATACTGAAAATGAAAATACACAACCTTATATGACGACAAAA
AATCGACTGAATTACTGCTCTACAATAAAAAGATAAACAACTAGATCGCG
TCTTTTGACCCTTTCAGGTCGATTGGACCACCGTGTTGCCGGGTGACCTT
AGTATTTCCATCGATGGTATTTCCAAGAGACTTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017537-exon-sc0000269-1575043694:60463..60902 | TCONS_00017537-exon-sc0000269-1575043694:60463..60902 | Clytia hemisphaerica | exon |
| TCONS_00017537-exon-sc0000269-1575043694:59766..60087 | TCONS_00017537-exon-sc0000269-1575043694:59766..60087 | Clytia hemisphaerica | exon |
| TCONS_00017537-exon-sc0000269-1510915933:60463..60902 | TCONS_00017537-exon-sc0000269-1510915933:60463..60902 | Clytia hemisphaerica | exon |
| TCONS_00017537-exon-sc0000269-1510915933:59766..60087 | TCONS_00017537-exon-sc0000269-1510915933:59766..60087 | Clytia hemisphaerica | exon |
| TCONS_00017537-exon-sc0000269-1491911889:60463..60902 | TCONS_00017537-exon-sc0000269-1491911889:60463..60902 | Clytia hemisphaerica | exon |
| TCONS_00017537-exon-sc0000269-1491911889:59766..60087 | TCONS_00017537-exon-sc0000269-1491911889:59766..60087 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000269 | supercontig | sc0000269:59766..60902 - |
Blast
The following BLAST results are available for this feature:
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