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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017397 ID=TCONS_00017397|Name=TCONS_00017397|organism=Clytia hemisphaerica|type=transcript|length=927bp
cacattttgtaaaaaagagACAGAATGATGTCAATTAATTGTTGATTATA
CATATTGAATACATCAATATAGCTGACATTATGTAACACGTTTTTATAAG
TGATGTGATAAAGCATATGATCTTCAATTTCTCTGTCAAAAGATAAGTAT
GGAAGCATGAATTGTGTAATTACTGAGTACTTTAAAATTATATCAAACCT
ATGTTTCAAGTCCAAAAAGTTGTCAtggaaaaatcatgaaaaaatgaATG
TTAAACAAAAAGTACCAGTCACAATGAATTGTGGCTGTTGCAGAGGAAGG
GGTACATTAAGTCAAGCAAGTTCTACTTGCGTACCTGGATACCACGCACC
AGTAAGGGACCTAGGAGTAGTGTAACAGATACACTGTTTTGATAGCACCC
ATAGAGTCAAATAATCTAGAGCATAGACTCTCCAATTCAAATTGTCGTTA
AAATTTCCTCAGAATGACCCATCAATCAATTTCTGAATTATTTTATACCT
TTTGATCGTATTCCAGGTGTTGTAGAAACAATTTATTAAGTGGAGAGTAT
CTAAGAAGCCAGTTTCTATTTATACTTATCTTTCAAGAGCTTGTCATTGT
ACTGCAACAATCCCAATAGCAGACCTACTCGAGGATATCAATCTTACaat
tgaaaaatttgtcaaagaaaccaGCACATTTTCATCAGCTTCATCTTCAC
CCAAAATAActgatatgaaaaaaattatatgtttacaaacattcctttTC
CAAGTTGAATGATAAATTATTGCAAGGtttctcgaaacaaaacatctact
ttaatcgtagaaattttagcgagactaattttagcgttttagcgtgtttt
ccctattttcgctaaaataaatctcgctaaaacacgccgaatcgacagat
cgctaaaatttatccgcgcgaaatttc Run BLAST on NCBI transcript from alignment at sc0000266:280205..281131 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017397 ID=TCONS_00017397|Name=TCONS_00017397|organism=Clytia hemisphaerica|type=transcript|length=927bp|location=Sequence derived from alignment at sc0000266:280205..281131 (Clytia hemisphaerica)
gaaatttcgcgcggataaattttagcgatctgtcgattcggcgtgtttta
gcgagatttattttagcgaaaatagggaaaacacgctaaaacgctaaaat
tagtctcgctaaaatttctacgattaaagtagatgttttgtttcgagaaa
CCTTGCAATAATTTATCATTCAACTTGGAaaaggaatgtttgtaaacata
taatttttttcatatcagTTATTTTGGGTGAAGATGAAGCTGATGAAAAT
GTGCtggtttctttgacaaatttttcaattGTAAGATTGATATCCTCGAG
TAGGTCTGCTATTGGGATTGTTGCAGTACAATGACAAGCTCTTGAAAGAT
AAGTATAAATAGAAACTGGCTTCTTAGATACTCTCCACTTAATAAATTGT
TTCTACAACACCTGGAATACGATCAAAAGGTATAAAATAATTCAGAAATT
GATTGATGGGTCATTCTGAGGAAATTTTAACGACAATTTGAATTGGAGAG
TCTATGCTCTAGATTATTTGACTCTATGGGTGCTATCAAAACAGTGTATC
TGTTACACTACTCCTAGGTCCCTTACTGGTGCGTGGTATCCAGGTACGCA
AGTAGAACTTGCTTGACTTAATGTACCCCTTCCTCTGCAACAGCCACAAT
TCATTGTGACTGGTACTTTTTGTTTAACATtcattttttcatgatttttc
caTGACAACTTTTTGGACTTGAAACATAGGTTTGATATAATTTTAAAGTA
CTCAGTAATTACACAATTCATGCTTCCATACTTATCTTTTGACAGAGAAA
TTGAAGATCATATGCTTTATCACATCACTTATAAAAACGTGTTACATAAT
GTCAGCTATATTGATGTATTCAATATGTATAATCAACAATTAATTGACAT
CATTCTGTctcttttttacaaaatgtg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017397-exon-sc0000266-1491911889:280205..281131 | TCONS_00017397-exon-sc0000266-1491911889:280205..281131 | Clytia hemisphaerica | exon |
| TCONS_00017397-exon-sc0000266-1510915933:280205..281131 | TCONS_00017397-exon-sc0000266-1510915933:280205..281131 | Clytia hemisphaerica | exon |
| TCONS_00017397-exon-sc0000266-1575043694:280205..281131 | TCONS_00017397-exon-sc0000266-1575043694:280205..281131 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000266 | supercontig | sc0000266:280205..281131 . |
Blast
The following BLAST results are available for this feature:
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