TCONS_00017384 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017384
Unique NameTCONS_00017384
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length179

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017384 ID=TCONS_00017384|Name=TCONS_00017384|organism=Clytia hemisphaerica|type=transcript|length=179bp
GTACAACTCTGGGAGTTCGAGAATACCATAATCTCAGGGCTTTACATGAT
CAAATTAAGAAGAGAACACATCGACTAAATAGCATGACATTTAAACTTGC
AGCTCAGtgGCTGACGAATACATTTTTGAAAGGTGGGAAAACAGAGGCAC
TTTCCACACCTGGCTTGCTAAAGAGGANN
Run BLAST on NCBI

transcript from alignment at sc0000266:148372..149144-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017384 ID=TCONS_00017384|Name=TCONS_00017384|organism=Clytia hemisphaerica|type=transcript|length=773bp|location=Sequence derived from alignment at sc0000266:148372..149144- (Clytia hemisphaerica)
GTACAACTCTGGGAGTTCGAGAATACCATAATCTCAGGGCTTTACATGAT CAAATTAAGAAGAGAACACATCGACTAAATAGCATGACATTTAAACTTGC AGCTCAGGTAACTTCCATTAACTCAAAAATTTTGCTTATGTTACTAAGCA TACAATTATACAACAGTTATCATTTTTTATATTTTTCCTTCTTATTTTTG ACCATGCTAGGTGAAGTCTGAGAATTAGGTCTGTTTGAAATAAAATGGCT TTTTATGACAATAAAAATCCTGGCTTTTTATGACAATAAAAATCCCATGA TATGATGTATTCAGTTGTTGTCCATGACATTGAAATAATTTAGTCTATAG CTACAAGTCTGCTTGTTCTTAGTCTGATTTTAGTTTGATGACTAGCTTGA TATAAACAGAAATTTTAAATAATTTTTCTAGACAGTACATTTAAAAACAA AAGACAAACGTTTCATCATTTTTATCCTATATTCTTCGATGGGATTAGTT TTTGTAGGTATTCTCACCACCTGCTAGTTCCCTTTAAGGGGAGGGTTAGG TGTTACTATTATCCAGATAATTCTACTCCATATTATACAATATGTGAAAT GAAATCTCATGATTTTAAAGGAGCATTTTTTATTTGATAAGAGATAATAT TGACAGTTTACTTGTGTGTGGTGACCAAATTATAACTTTTTATCATTTTA GTGGCTGACGAATACATTTTTGAAAGGTGGGAAAACAGAGGCACTTTCCA CACCTGGCTTGCTAAAGAGGANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009732XLOC_009732Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017384-exon-sc0000266-1575043694:149038..149144TCONS_00017384-exon-sc0000266-1575043694:149038..149144Clytia hemisphaericaexon
TCONS_00017384-exon-sc0000266-1575043694:148372..148443TCONS_00017384-exon-sc0000266-1575043694:148372..148443Clytia hemisphaericaexon
TCONS_00017384-exon-sc0000266-1510915933:149038..149144TCONS_00017384-exon-sc0000266-1510915933:149038..149144Clytia hemisphaericaexon
TCONS_00017384-exon-sc0000266-1510915933:148372..148443TCONS_00017384-exon-sc0000266-1510915933:148372..148443Clytia hemisphaericaexon
TCONS_00017384-exon-sc0000266-1491911889:149038..149144TCONS_00017384-exon-sc0000266-1491911889:149038..149144Clytia hemisphaericaexon
TCONS_00017384-exon-sc0000266-1491911889:148372..148443TCONS_00017384-exon-sc0000266-1491911889:148372..148443Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000266supercontigsc0000266:148372..149144 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017384 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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