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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017351 ID=TCONS_00017351|Name=TCONS_00017351|organism=Clytia hemisphaerica|type=transcript|length=891bp
CTAAGCGCGCGTTTTGTGAAAATCGAAAAGTTTCGAAGCATTCAGTTCAG
GCACTCAGCACTCAGGACTTCAGAAATTTGCCAACCTGCCAGACAACCAT
AAACCTGACAACCACAAGAAGACAGAGCAGTCTGAAGACCTCATCCACAA
TCACAAGAGAAAGATACTGAACCTTGGATATGGCTGAGCATACAATCTTA
CTGGTGCAACCCATGAATAAATTAGAAACACGTACATATTCTGACTTTGA
AACCATCAACGAATGTATGGAAGGTGTCTGTAAGATATACGAAGAGCATC
TAAAGAGGACGTACCCTAACAGTCCATCCATTACATACGATATCAGTCAA
CTATTTGATTTCATCGATGGTCTGACCGATTTGAGTTGCCTAGTTTTCGA
CAAGAACAAGCAAATGTACGCTCCGAAAGGGAAAGATTTCATCAAAGATA
GAATCTATAAAATGTTGAGAAACCAAGCCGGTAAATGATATTTACAATGT
CTCCATAATGGTCTTGCTTTCCGACAATGTGGATCCTTGCATCCATGGTG
ATCGCTAGATGTTAGCTACCgcgttatttttattttactacaatttgtaa
atatttttcaagtaataTCATGCATaaagataaaaatagaaagggTCAAG
AAAGTAATGATTTTAACTTAGTGCTTTAAAGCTAATAACTTAAAACTTAG
AAATGTACTATAGGGAAACGAGCAACAAATATACTAATGTATGAGCTTTT
GACCTTGCGTTACTTTCAATttccaaaaaccaaaaagtttGTAAGGGCAT
CTACGTGATTGTGATCTTTAATTAAGAAGATGTATACACAGGCTTGTCCC
TCATCGTCCCAAATAGAATAAATGATGGGAAAAGTCGTAAG Run BLAST on NCBI protein sequence of TCONS_00017351-protein >TCONS_00017351-protein ID=TCONS_00017351-protein|Name=TCONS_00017351-protein|organism=Clytia hemisphaerica|type=polypeptide|length=102bp
MAEHTILLVQPMNKLETRTYSDFETINECMEGVCKIYEEHLKRTYPNSPS
ITYDISQLFDFIDGLTDLSCLVFDKNKQMYAPKGKDFIKDRIYKMLRNQA
GK Run BLAST on NCBI transcript from alignment at sc0000266:22886..39933+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017351 ID=TCONS_00017351|Name=TCONS_00017351|organism=Clytia hemisphaerica|type=transcript|length=17048bp|location=Sequence derived from alignment at sc0000266:22886..39933+ (Clytia hemisphaerica)
CTAAGCGCGCGTTTTGTGAAAATCGAAAAGTTTCGAAGCATTCAGTTCAG
GCACTCAGCACTCAGGACTTCAGAAATTTGCCAACCTGCCAGACAACCAT
AAACCTGACAACCACAAGAAGACAGAGCAGTCTGAAGACCTCATCCACAA
TCACAAGAGAAAGATACTGAACCTTGGATATGGTAAATATTTTATCGTTC
CTTAAATAGTCATGGTTTTAATGAGCAAACAAAACACTCTAGATCTTTAG
ACAGTTAGAGCTATCTAATGTTAAATTCCAGACGATACGAATCAATAAAT
ATATGATTAATTGAAGTAATCGATAATGCTAATGATCAATTAACAATTTA
ATTTATAgtaccaaaattttcaaaaacttgtgagtattcaatcattttct
taAAACAATTCGAAGACTTGATTATTCTGAATAATTCCTGATTATTATGC
CAGTGTGGCGTGGAAATGATGCAAAGTCTACGCTTAATTGTTATTTGTTT
GAACTGAGGTCTACGCCAAAAAAAGGTCCGCCTGTAGGGGGTTTGGGATA
CTGTAGCTTCCCCCAATGAGTCCAGAGCCCTGATGGTGGGGGTTCAGGGG
CGAAgctcagttaggaacatttggcgagttcctgtacgcggccgcaatca
aaaaaatcataaccacactcataaaaaaattgtgtttgtgtcttttttta
ccgttttttgcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNgaaaatggtaagaaacttaagtttacgagtgtcattcagtttttg
ctggctgatagaatggcaggatcctggatggtttccctaactgaagcTTA
cttcagtgtagacctaaagctctaaaacagcatctaataacatgaaaacc
agaatatgattcttcaatgggaatcaaaactataaagtacTCTTGTAATT
TCAAGTAATCTTGACATTATTATAGTCATTTTATTagacagtgcgtcaca
aacagccatataaacaaaactcaacattctcacaataagttgtctttttg
atttcccaaacattcgtctcaagcgttctcttccacaataatttatgtat
aaattgcaattgcggtcagtccacagtcggcttcaacatatacacgtgtt
tttatttacgtgaccgaagtgcctactaaaacaatccgggggtaaatagN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATTGC
AGcatttgggtaaacgagacaaaactctaaaaaagctggtgttttgacgc
gcttccgtgctctcgaaatatcgcggtttgagacgcactgttagatgttt
tgtttcaagagtttttgcaatagtttattgttcataATTGAAAATAACTT
GGTTAGGTATTCGGAATTAGGGATTAGGGATTCGCAattaggggccgtcg
acaaacgactttccttttttttaacggcctgaggccgttaaggttcagac
cccctccccccctacGTCTTAGCGGCCAAAAAAANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCGCCATGTTCTTTCGATTCA
TAATcctcaaagttcttcttttcgcaCGGAATAAACATGTGGCTTTGAGc
cgtgacctttcaattttgaaactccaaGCCCCGCAGCAAGTCAGGGCGGG
ATGGTTGGAGCAAGGAGTCAACTAAGGCGGAGGGAAAAATTGCCGACTTT
CGTCATGTGACCAGTCATTTTTCTCGTCGAAGCATTTAATTGGTGATCGG
AATAAGGTGAATGTTGTGTGGTTGCTTTGGTCTTAGCCTTTCTTCACAAG
TTTCTACTTTTTggactgatgaaatttgtaagtgagactttccctttttt
taaaacttttttaacggcattgcagtgaccccctcccaccccttacggcc
agaagccgttaaaaaaaaggaaaatcgtttgtcgacggccccttagGGAT
TAGGGATTCAaactttgattgaattttttaaaagacataattaacttacg
actttcaaataaaaggaaTATGGTAGAAAACATTCCCAAGtttcatttcc
accaaaaatggtcgctctccattgcactgttcgagctgtaaaaatggCAG
AATGACGAATTAGGGATTCGCGAAATCgtcaccgagtgaacaactcggcc
tTGTATGGAGAagagcagacttctgttgaacttttaaatattggaatacg
gttaggattattctaaggtctcatttccaccaaaaatggttgcTCTCCAT
TgcagtgttcgagctgtaaaaatggCAGACTGACGAATTAGGGATTTGCA
AAACCgtcaccgagtgaacaactcggcctTGTGTGGAGAAGAGCAGcctt
ctgttgaacttttaaatattggaatacggttaggaTTGTTCtaaggtctc
atttccaccaaaaatgattgctctccatcgcagtgATCGAGCTGTAAAAA
TGGCAGACTGACGAATTAGGGATTCGTGAAATCGgcaccgagtgaacaac
tcggccttgtgtggaggagagcagacttctgttgaacttttaaatattgg
aatacggttaggaTTGTTCtaaggtctcatttccaccaaaaatgattgct
ctccatcgcagtgATCGAGCTGTAAAAATGGCAGACTGACGAATTAGGGA
TTCGCGAAATCGgcaccgagtgaacaactcgaccttgtgtggaggagagc
agacttctgttgaacttttaaatattggaatatgttTAGAACTattataa
ggtctcatttcTACCAAAAGTAGttgctctccatcgcagtgttcgagctg
taaaaatcgcagactgacGAATTAGGGATTCGCGATATCGTCACCGAGTT
AACAACTCGGACTTgtgtggaggagagcagacttctgttgaacttttaaa
tattggaatatgttTAGAACTattataaggtctcatttcTACCAAAAGTA
GttgctctccatcgcagtgttcgagctgtaaaaatcgcagactgacGAAT
TAGGGATTCGCGATATCGTCACCGAGTTAACAACTCGGACTTgtgtggag
gagagcagacttctgttgaacttttaaatattggaatacggttaggaCTA
TTAAAACATCTCTTTAAAACCAAAAACAGTCGCTCTCCATCACAGTGTTT
GAGCTCtaaaaatcgcagactgacGTATTAGGGATTCGCGATATCGTATT
CGCGATATCAATGTATTAGGGAAAAGAAAGGGCGTAGTTATTTTGttatt
tagggaaattccctatttagaTATTCAGCAATTTTTCAACAGTGGAACTT
TGAAATGCTCTCCAGGCTTGGGAAATTGCTCAAAGGAGTCCAAACCAAAA
ACTGATGCAAGCTGACATGAATATAAACAAGTTgtgaacggaaggaaaag
tcacaTAAGACCTAGCCttgggtccacttaaagctttttttatagactgg
atggcgcgattaagtggcccggtagcaTATGGTAATATGTTTTTGCTTAg
gcgccagattttagttgtttttggactGTAAAAATAGtataaagcaatgt
ttttatttgagaataagggatttcaaatctgttattgatgtttgtttctc
atttatGATTATATCTGttaactccaagtagttttattgttatttggatt
ttcaacattttttctcaaaatggcgacctcgccaaatgctcctagtctac
ttcactggactctgtgtcataaaaaattatcaaaaagcaaagttcagcca
aaagtagactctggTCTACGTAAGACCCacttaatcaacaaaaattctac
ataatgtcggggaaattcccaaacAGTCAGTGAAAATACCTCCATTTAAA
ACATGTTaaaagttcacaataacgactttctttttacTACAGAAACCAAA
CGAATGAGAGCAagtcattaaaactaaaagtcagtgCTCCGTGGTTGTGA
CGTAAGTTTTGTAATCGATAAACATCTTCCTCGTAAAAAGTGTCATATTG
AAATACCTTTGAGAATACTAAAGTCCACTAAGTGCAATATcttcttttta
caaaaaaaatgaagtgagTGCAATCTTAAACGAATAAGTAGCGAAAAGGG
TTNATGCAATATcttctttttacaaaaaaaatgaagtgagTGCAATCTTA
AACGAATAAGTAGCGAAAAGGCGTTTTTCAAGGACAGGCACTATCCCGTT
GTTACACGCCTGCAGCACCTCAGCTAACATAAACGTAAACGTCCACAACG
TTCATGTAACGTTCGATTGTAAAGTTAGATATACGGTGAAAAAGCGTTAC
TTCTTAGTTGCGATATATTGTGGGGAAATAAAACCGGGTTCAGATGAGtt
gatttcaaagattttgattaattttagcgagaattaattttggcctAAAA
TTTAGCCGAATTGAATTTTCTTCAGGGTTGAATTTGGACTTTGGGATTTT
GGGAAACCTCGATCTTTTTCTAActaattatttttcctttttttttcctt
ttttccttaCGAATCGATCGATAATAAAACGGCTAGAGACCGGAGTGAAC
AAAGAAACTAGCCGTGTTTGTTCACTCCGGTCTCTAGCCGTTTTATTATC
GATCGATTCGTTAGGACATATACTCAGCATCGTTCCGGCCTGTTTAGCCG
TATCGCCTCCGCTCCGATTCAAATCCGATCAACATCCCCAATGTCATCCC
ATGATGACTTTAATACGAATACGACAGCAAGAGGCCGGGTGAACGCGGGC
ATAGGCAGTGACGGCTAGAGGCTGGAATGACGAGGCAAAGTATCAATAAG
CGAACGAAAATGACCTAGTAGTactatttttggttgaaatgagaccttat
aatAGTCCTAaacgtattccaatatttaaaagttcaagagaagtctgctc
tcctacacacaAGGTCGAGTTGTTCACTAGGTGGCGATTTCACGAATCCC
TAATTCgtcagtctgcgatttttacagctcgaacactgcgatggagagca
aTCATTTTTGGTAGAAATGAGACCTTAGAACAAtcctaaccgtattccaa
tattcaaaagttcaacagaagtctgctctcctccacacAAGGCCGGGTTG
TTCACTCGGTGACGATTTCGCGAATCCCTAATTCGTCAGTCTGccatttt
tacagctcgaacatTGCGATGGAGAGCAACCATTTTTAGTGGAAATGAGA
CCTTGGAATAATCCTAAccatattccaatatttaaaagttcaacagaagt
ccGCTCTCTTCCACACAaggccgagttgttcactcggtgacgattttgcg
aatccctaattcgtcagtctgccatttttacagctcgaacatTGCGATGG
AGAGCAACCATTTTTGGTCGAAATGAGACCTTAGAATAAtcctaaccgta
ttccaatatttaaaagttcaacagaagtctgctctcctccacacaaggcc
gagttgttcactcggtgacGATTTTGCGAATCCCTAATTCGTCAGTCTGC
CATTTTTAAAGCTCGAACACTGCGATTGAGAGCATCcaattttggtggaa
atgagaccttaGAATAATCCTAaacgtattccaatatttaaaagttcaac
agaaatctgctctcctccacacaaggccgagttgttcactcggtgacgat
tttgtgaatccctaattcgtcagtctgccctttttacagctcgaacactg
cAATGGAGAgcaaccatttttggtggaaatgagaccttagaataatccta
accgtattccaatatttaaaagttcaacagaagtctgctctTCTCCATAC
AaggccgagttgttcactcggtgacGATTTCGCGAATCCCTAATTCGTCA
TTCTGccatttttacagctcgaacagtgcaatggagagcgaccatttttg
gtggaaatgaaaCTTGGGAATGTTTTCTACCATAttccttttatttgaaa
gtcgtaagttaattatgtcttttaaaaaattcaatcaaagttTGAATCCC
TAATCCCTAATTGCGAATCCCTAATCCCTAATTCCGAATACCTAACCAAG
TTATTTTTAATTATTGTTCAACTTgtagagggaatgtttgtaaacataga
attttttttcatagcagttatttaggggtcggatttaggcagggctgtcg
gatttaggacgaCTTGCGGTATATAATAGGAAATCTAATATGCGGATCGT
TAAGATATACTGCCCGGAATGAATAACTTTCCTAGTTAGGAAAATTCAAA
GCGTTTAAAAGCCCTggatacattttgaaattttgtttccgTATCATGTA
GAAAGGGTCTTATCAAGTTAGTGCCTTTTCAAAAGCCATATCTCAAGCCT
CCGccagtatagaccttttttcaaagaggccaccctgttgaataattatg
tagtccagccataaaaacaatgataaagccatgcataattactgcatcat
gcatattgtaataattatgcatggttttatcattgtttttctgctggact
acataattattcaacagggtggcctctttgaaaaaaggtctatagaccta
actcttcatacaaagaTTATGGGAAACGCATAGGACTTTGTACACTATCA
GTCCGTCACAAagtgccatataaacaaaactcaacatccttacaaaagtt
gtctttttgatttcccaaacattcgtctcaagcgttcacttccacaataa
tttatgtataGTAATTGCAATTTCTGTCAGTCCACAGTCAGGTTCAACAT
ATACGCGTGTTTTTATTCACGTGAtagaagtgcctactaaaacaatccag
gggtaagtggcgaagcaacatagcggattattcgtaaagtaaagaaatat
cttttggcattgaaaatcaaatataatatattacatttatatttccttaa
ttcaaaaatcacaaattcaTTTTGCAAtcgcgaaaaaataaaaaaataaa
ttaatattacataataaagcgcccccgtcttttactctcgtcTAATTTCT
GATCTCAGGACGTGCAAAACACCCGTCCGCctgtccgcccaatatccacc
caatcatctCAAATTCACTTTAATTATGCTTTGACTTTcgaaaatattat
ttaaaaactatgaatttataataattacaaaaaaagaaaagttcgaTACT
TCATCACTGAAATATtctgaaatattcaataaatttctagtttcaatttt
caatgggcGTTTTCTGTTTTCTAGCGCTTCGTTGAACTTGCAATCTTTGC
CTCACACCAACTTTCACGGCcactcgtaataattatgcattgccaaattt
ggttcttcattgtcaagtcaggatcgatggtgacgtcagcTAAGCATAAA
AATAGAATACCTTCTTTtgctcgcgggattgatggctGTTGATGgcaact
tttcatcttcgttatttttaaaatgaagcacaaccgaaaaaaaacgaagc
ttcaaaaagttgcgtatttccagtgagtaaacgattctgacaattaacga
aattgatgatgatgattttttttcggtcaggcaaatgtctcgtattgagg
attctagtcttgacccctaagcctacgtgagattgaagcgtttgggtaaa
cgagacaaaacttgaaaaaagctggtgttttgaagcacTTTCGTGTGATA
GAAATATTGCTCTTTGTGACAGACTGattatgctgcacgcaagcacttaa
aaGTCAAAGTCCTGCAAAAGCAAGACAAAttaatcagttttttgaagttt
gcaaaaaacgcaacatagaagatctttcaaattcagtatgtgaatagagc
agtaaaaaatacaactttcctatttttccttttttttaggaagttctagg
aatgaaaataaagggataatgataattgaatactatccattgatgatccg
cgcggcactatcgtaaagctagaatttcgcgtactctttgcttgagaaaa
tgattgacagattgaagtttttcacctgtGCAGGAGCTTGCGGGCGTTCT
GCAAGCGTTTTTGGCTCAATCCTTGGactgcgctaaaaatggtagactga
gctgtgatagatcatttcgatggaagttgttggaatgtttacaaggctct
tgacagaaaaatggtttgttttattgtcaatgatgacagtgcggttacta
attttgattttagaacTTTAGAGTTAGCCTGTCCGTTTGATATacaagtt
gaaaatttcaatttctctGGAGGAGATTAGTATCTATCAAATTGTGCTGT
TGGAAACATGcgactttttgtattttttgcaaaatttatgaaaatagttT
CACTTTCCTAATTTGGAAAGTTTTCCTTTCCTAattactgtaagttggtc
taatgtcgacatcccttcttctaatttcgacatccttctttagagatagg
aaggtcggaatcactgatggacTCCTCAACTGATTGCTAAGAAgggaaaa
ttagtttcaatcagcaatttcgagggatgtcaacattaaaCCGACTTACA
GTAGGAAGGCCTCTCCTAATTAGGAAGCTCAGGGAAATTGTTAAATACTT
TCCTAATTAGGCAAAAACTCCTGACTGACCATTGATTACTTTAATAACAA
ATTGGTTACTTTGGTGGTTCCCAGGCCTCTAAGcttagctgtcaactctc
ccgcatgTCAACGTTTTCTCCCGCAGAAAAAAATAAGCCAAAACTCCcgc
attttcaatattttctcccACATCTCCCGcatttcagaaaaatttcaaat
ttcctgagaaaaaaattcatattttgaaaaaacgcaatggcaaaatttcc
tgattttggaaaatttcccaaaaaaatttccgatAAAATCAGataaataa
ttccgcacatgtaaatgggtcagtgtttgaggtccggcaaaatttcacGG
AAATAGCCTATCAGGCAGTGCGCAGAtataggtgggttccgtctcctcgt
agatctttttcttgggaagttgatcttcaaattagttttcaaggttggtt
GGGCTCAAATCTTTTCagctatggctcaaattttaagcaatttcccatag
tttttgaaaatgttaatttcattaaaaagcgccgggttattttttcatga
atccatttagaagttttgcggcgcatttgtTTACTTgcaagtcaagtaaa
cgatatagcgctttcgcagcattaatctttggtACACATTTCAGCGTGAT
GCTAGTTTTACTTACTgaacggtttgtgtaatttacgatgcgcgatccaa
cgattcacgatgcacgatgcacgatccatgcatgatttatgttgatttat
gttaattattctaattgtACGAATAAGTTTTTATAATGCTAGCTACAAAC
ATTATATAACAACAACGAAAAAGANGTACGAATAAGTTATCACAATCCTA
GCTACAAACAtcatataacaataacgaaaaagaaattaaaaaaagaagct
gaaataatttatcataatcagaatgattagtgtagaaaaaccaaaaattg
ataaCGAGAGAAAGAAAATGATCCCAACATGCCTCACtcgaaagaaaaag
ccttgacgtcatagaaaagttttggcgccaaaaatttattaaaacaaaag
ctcatttttgtacgtttattatttttttaagaacagtgaataaggtaaat
aaggaatcattggctacattacttttggcatgttcttataaaagcctttc
acCAACAGAATGGCAACTGGTGCTTTTATtcatttgatctttttctttgt
ttgatgatcaagtCAATTAATTTGattcatttgatctttctcaCTTCCCT
ACTTTATCACAACATTGtaagtttttgtttataaccctgtctcaatccaa
tgcattaggttggtttaatcggagaaacgttttttttttaaagaaagaaa
gcaaaaaggttacaagatattcaattcaaagcatgggcaaaaaagtttat
gttttgatttgatttgattactTCACTTTGATTTTccaggaatacaaaag
aaggaattaaaatatgtgattactaaaacctgtaaatgcataattagaat
aattaacataatatatgcatggatcgtgcatcgcgcatcgtgaatcgttg
gatcgcgcatcgtaaattacacaaaccgctaACTGAAAGGCAGAAACAGA
GCACAGAAAAAGGCACACAAAGTCCCGTGGGATAGACGCTAGACAAAGGG
AAACACATGAAGGAGAGCAAGCCTAAGGGAATACGTATCACATAATTAAC
AAATAAATAGACAATAAACATACACTCATGTTAACATAAAGATATACAAA
AACAACTGCTATTCGGCAGTTACACTGACCAAACATAGTGTATATTTCTA
TGTCCATaacttcttaaaaaaatattccCTTCATCTCCTGACATCACTGG
ACTTTCCTCTACtatatatctttaagaaaaacttaaaaaacattgaacca
aagcacaaaaaaaGCACCAGCCATAAGATTGAACCCAGCAATTTTGCTGC
ATTTTGTGTGCATTCGCCCTGGGTTTCCTTAAGTAACTCGTATCACGCAT
TCTAATTGGTCGGAGAATAAGGAAAGTGGTTTTCATAATCTTTAATTACT
TGGAATACTTGGAAGTAGTTCGACGCTTGATGGCATCCATGGCATCCAGT
GCCATGTGTGAAATACTGTTCGTCTCAGCTATCCTCGAGTTTGTGTAGCC
TGAAACAAGAGGTTCATCTGAGTACGCAAGTAACAATTAGTTCAATGAAG
TTATGGAGTACAGGTCATgtaatgaaaataaatgaaataaattatgACAT
AAAAAAGATGCTTTCTTCTAATTTTTGAAcctttaaacaaaaataaacgt
AAATCCTGTTACGCTGGCCCATAATCCACCACTGCCCAAGATAATAATAT
TGATTTGAATTAGCATTGAATGTCATATTCTCAACTtaagttgagctaca
atctgacaatgtctgtctgtcacaaaaactttagggcagcctggagactt
caaaaatgcttgcatttggctgaaatttggcacacttgttccttctggtt
ccttgggtgaatatctgggggagtttttttcattttttgaaaatttagat
ttttgggggctggggacgagttttcgccaaaacgaggctaaaacattggg
gcagcctggagacttcaaaaatggtcggatttggctgaaattttgcacac
ttgttcctcgGGTGAATATcttggggtctacaattgggccattgaataat
ttgaagccactgaagttgagcccagtgcgttgcgcacgttcgacaaTTTT
GGTTGGTGAACAAGTTGGTAAAGGatggaaattttattgaaatcaaTGTT
GTTTGTGTAATTTTGGATGCAAAGTAAAAGGAAAAGGTCATCTCCTTATC
ACACTGAGTAGGAAAGGGTAAAAAGATTAACACTGTTATTCAtgatacgt
cacttgcaaccaatcagctatttgGTCTGTGATGTGTTTAGCACAATGGC
TCCTTTGGATGATTTTCTTGACAAGAGGCtatagttttgaatttttgcta
GTACAATTGAGTTTTCGAATGTTGAAAGTTGGTAGGAATATTATCCTAGT
GTCCTTTATCGAATTCTTCCTTTTTCAGGCTGAGCATACAATCTTACTGG
TGCAACCCATGAATAAATTAGAAACACGTACATATTCTGACTTTGAAACC
ATCAACGAATGTATGGAAGGTAAGGAAGGCTTCTCcattattttaataat
tttttttgtaaacctGTCAACGAAATCATTTCTTCGGGCCACTTTTCATA
GAGTTCACATAACGTGTCAAAGTTAACCCACTGTTATTGCTATTGGTGTA
ATGGTCAGCGTTATTTACATACTAGCATTTATCTTAACATGTGCAGAGAC
TAAAGTTTTAGCAAATTTATTGGATTATCTGTTTATATGAGCTACCTTGT
TGCTCTAACAGCTTGGAGGATGTTTGTTTATCTGTGTTTTCcaaaatgaa
tattttgaagCCATCTTGAAAGAGGGAAAAATCTTGTTGAAACGCTGATT
CTGTGGGTTTCAGAATAGCGATTTCAGCATTTCCACTTCATGTCATTAGA
TATTCGATTTTGTAGGAGTTTAGTAGCTTCCAGGCTAAGGTCCTTGTTCc
catttttctcaaatctttCGAGTTTTAATAGCATTGCAACAAAACCTACG
TGTTTACGTGTGTGTCACCCCCAAAATCATTAATATTACAGAAATGACAA
AACAAATAGGAAGTGATACCATTGGCTAAAATGTTTAAGAAACTATGTAT
CTACATGAATTATCGCCAtttcttttccaatttttctatTCAGGTGTCTG
TAAGATATACGAAGAGCATCTAAAGAGGACGTACCCTAACAGTCCATCCA
TTACATACGATATCAGTCAACTATTTGATTTCATCGATGGTCTGACCGAT
TTGAGTTGCCTAGTGTAAGTATTGCAATATTTTAAAAGCTTTGTAAACAT
AATAAATATCTcctcttaacatgtttttaatACGTTTATGAGGACTGAAA
AATGTGTTTCCCTTAGATTAGATATGAGGCTCTGAAGATTCTGCTGAAAA
ATTAACCTTtctccgttcgttcgttcgttattagctttcctcgtgattgg
tacattagttttttttttgcacaaagatgtgtaactataaaccctcgaat
gtgacggagcccgattttcaaaaaaaaattgggggggggcaaatttgggc
caaaaacggctaaaaaacgggttttttggactttgggaaaaattggatca
ttaactttttctgatttttttcataaaagtagggtaccctcataggtaaa
agatggctgaagcagattttttcaaaaaaattttcttggctcaaaaaacg
catgtttatctataagaatcactattaataaacatacatcaatgttctta
gttaaattactcaatttttttatgagatggatgttttttttgctcatgag
ggcttacttttgaagaatgtgtttgtttagacatgaaatttaggttgctt
ggcgtgtttttataaaaaaactggccaaattcgatatttatttataagca
cattaccaattacttaggtattagcttttctcgagattcgctctttgatt
ctttatgattttttgcacaaacatgcataactatacaccctcgaatgtga
cggagcccgactttttaaaaaaaattggagggcaaatttgggccaaaaaa
cggccaaaaaacggtttttttggactttgtgaaaaattggatcattaact
ttttctgattttttgcatgaaagtagggtaccatcataggtaaaagatgg
ctcaagtagattttttcaaaaaaatcttgctgGCTCAAAaagcgcatgtt
tatctataagaatcactattaataagcatacatcaatgttcttagccagg
ttactaaattttttgatgagatagacgTTTTTTTGATCACAaaatcttga
atatgaaagaatatttcaagagcatgaaattttggtttctgaacgttttt
tttataagaaacaaacgactaattttaatagatcgccactatttgtgttc
tgaatgattgtttaatggtcactcTCACGTAGATATGAATTATACCAGGT
AgttccataaaagtatcacttgttaaacTTCATGGAGCTTTATTCATACT
GGGGGGGGCTTTTTCTGTTCGGTGGTGAAACTTATGCTAATagcttttga
catgaaattttctgtaactAAGTTTTcccaacttttatttagcttcaggC
CCGTAGGAAGCAATTTATTATTGAGGGGGCATAAAGTTGAAGTCAAACAA
AAACACAGCGTTTTTTATTTAAGCTGGGGGTTTTGGGGGCGGTAGCCCCC
AACGGATCCAGGGCTGGCCGTGGTGGGGGTACAGGGGGCGAAGCCCCCGC
TAACTGGCgaattttctagaatttttagataaaaagacCCTATTTTTGAA
CTATTTTCCAACAACAGATTGAAACAATTTGTGCAAATCCAATTCGACAG
CTTAGCTATGGCAGAATCTCGCTAACTTTTTAACCATATACAACCTGGAA
AAAACAACTATCTTTCGGTGGTCGGGCAGACACGTTcgattattttatca
aaacaaaacaatgaaaaaaattatttttgaaaaattattgggggggggca
aCTGCCCCTGCTGCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNc
cccccccccccccccccccggttgcTACGGGCCTGagcttcaaaatgaaa
taatttgtgTGACCTAAAAGTTTTCACATGAGAATGATGAATTtatgaca
gtaaggtgtcatatttaggataaaataagtattttttaaaTAGCTTTTCT
CTAAAActttttgttagaatacaatagatATTTAGATAGAAGAACTAAGG
AAATAATAGATTTTTGCTCCTTTTGGGCATGATGcatgatgtcatcaaaa
atttcttttatcaaaagataCATTATATGACAAGAATCCTGTGTaccaaa
ttttatttaaaaaaacctactagatcaaaagttaaggggtggtacaggaa
aagacccccccccccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccccccccct
agttctgaatcGCCCCTAAAAGCCTTAGTTCGATTAGAGTTAACCTCTAA
ACTAATTGGTTTGTGCATTAGATAACTGTCAAAATGATATTGCTCTATCC
TGGGTATTAAATCGTTTAAGATTACCATTGTTATCTTAATATTTATTTCA
GTTTCGACAAGAACAAGCAAATGTACGCTCCGAAAGGGAAAGATTTCATC
AAAGATAGAATCTATAAAATGTTGAGAAACCAAGCCGGTAAATGATATTT
ACAATGTCTCCATAATGGTCTTGCTTTCCGACAATGTGGATCCTTGCATC
CATGGTGATCGCTAGATGTTAGCTACCgcgttatttttattttactacaa
tttgtaaatatttttcaagtaataTCATGCATaaagataaaaatagaaag
ggTCAAGAAAGTAATGATTTTAACTTAGTGCTTTAAAGCTAATAACTTAA
AACTTAGAAATGTACTATAGGGAAACGAGCAACAAATATACTAATGTATG
AGCTTTTGACCTTGCGTTACTTTCAATttccaaaaaccaaaaagtttGTA
AGGGCATCTACGTGATTGTGATCTTTAATTAAGAAGATGTATACACAGGC
TTGTCCCTCATCGTCCCAAATAGAATAAATGATGGGAAAAGTCGTAAG Coding sequence (CDS) from alignment at sc0000266:22886..39933+ >TCONS_00017351 ID=TCONS_00017351|Name=TCONS_00017351|organism=Clytia hemisphaerica|type=CDS|length=1236bp|location=Sequence derived from alignment at sc0000266:22886..39933+ (Clytia hemisphaerica)
ATGGCTGAGCATACAATCTTACTGGTGCAACCCATGAATAAATTAGAAAC
ACGTACATATTCTGACTTTGAAACCATCAACGAATGTATGGAAGGTGTCT
GTAAGATATACGAAGAGCATCTAAAGAGGACGTACCCTAACAGTCCATCC
ATTACATACGATATCAGTCAACTATTTGATTTCATCGATGGTCTGACCGA
TTTGAGTTGCCTAGTTTTCGACAAGAACAAGCAAATGTACGCTCCGAAAG
GGAAAGATTTCATCAAAGATAGAATCTATAAAATGTTGAGAAACCAAGCC
GGTAAATGAATGGCTGAGCATACAATCTTACTGGTGCAACCCATGAATAA
ATTAGAAACACGTACATATTCTGACTTTGAAACCATCAACGAATGTATGG
AAGGTGTCTGTAAGATATACGAAGAGCATCTAAAGAGGACGTACCCTAAC
AGTCCATCCATTACATACGATATCAGTCAACTATTTGATTTCATCGATGG
TCTGACCGATTTGAGTTGCCTAGTTTTCGACAAGAACAAGCAAATGTACG
CTCCGAAAGGGAAAGATTTCATCAAAGATAGAATCTATAAAATGTTGAGA
AACCAAGCCGGTAAATGAATGGCTGAGCATACAATCTTACTGGTGCAACC
CATGAATAAATTAGAAACACGTACATATTCTGACTTTGAAACCATCAACG
AATGTATGGAAGGTGTCTGTAAGATATACGAAGAGCATCTAAAGAGGACG
TACCCTAACAGTCCATCCATTACATACGATATCAGTCAACTATTTGATTT
CATCGATGGTCTGACCGATTTGAGTTGCCTAGTTTTCGACAAGAACAAGC
AAATGTACGCTCCGAAAGGGAAAGATTTCATCAAAGATAGAATCTATAAA
ATGTTGAGAAACCAAGCCGGTAAATGAATGGCTGAGCATACAATCTTACT
GGTGCAACCCATGAATAAATTAGAAACACGTACATATTCTGACTTTGAAA
CCATCAACGAATGTATGGAAGGTGTCTGTAAGATATACGAAGAGCATCTA
AAGAGGACGTACCCTAACAGTCCATCCATTACATACGATATCAGTCAACT
ATTTGATTTCATCGATGGTCTGACCGATTTGAGTTGCCTAGTTTTCGACA
AGAACAAGCAAATGTACGCTCCGAAAGGGAAAGATTTCATCAAAGATAGA
ATCTATAAAATGTTGAGAAACCAAGCCGGTAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017351-exon-sc0000266-1491911889:22886..23067 | TCONS_00017351-exon-sc0000266-1491911889:22886..23067 | Clytia hemisphaerica | exon |
| TCONS_00017351-exon-sc0000266-1510915933:22886..23067 | TCONS_00017351-exon-sc0000266-1510915933:22886..23067 | Clytia hemisphaerica | exon |
| TCONS_00017351-exon-sc0000266-1575043694:22886..23067 | TCONS_00017351-exon-sc0000266-1575043694:22886..23067 | Clytia hemisphaerica | exon |
| TCONS_00017351-exon-sc0000266-1491911889:35814..35904 | TCONS_00017351-exon-sc0000266-1491911889:35814..35904 | Clytia hemisphaerica | exon |
| TCONS_00017351-exon-sc0000266-1510915933:35814..35904 | TCONS_00017351-exon-sc0000266-1510915933:35814..35904 | Clytia hemisphaerica | exon |
| TCONS_00017351-exon-sc0000266-1575043694:35814..35904 | TCONS_00017351-exon-sc0000266-1575043694:35814..35904 | Clytia hemisphaerica | exon |
| TCONS_00017351-exon-sc0000266-1491911889:36529..36649 | TCONS_00017351-exon-sc0000266-1491911889:36529..36649 | Clytia hemisphaerica | exon |
| TCONS_00017351-exon-sc0000266-1510915933:36529..36649 | TCONS_00017351-exon-sc0000266-1510915933:36529..36649 | Clytia hemisphaerica | exon |
| TCONS_00017351-exon-sc0000266-1575043694:36529..36649 | TCONS_00017351-exon-sc0000266-1575043694:36529..36649 | Clytia hemisphaerica | exon |
| TCONS_00017351-exon-sc0000266-1491911889:39437..39933 | TCONS_00017351-exon-sc0000266-1491911889:39437..39933 | Clytia hemisphaerica | exon |
| TCONS_00017351-exon-sc0000266-1510915933:39437..39933 | TCONS_00017351-exon-sc0000266-1510915933:39437..39933 | Clytia hemisphaerica | exon |
| TCONS_00017351-exon-sc0000266-1575043694:39437..39933 | TCONS_00017351-exon-sc0000266-1575043694:39437..39933 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000266 | supercontig | sc0000266:22886..39933 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000781 | Enh_rudimentary |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007049 | cell cycle |
| GO:0045747 | positive regulation of Notch signaling pathway |
| GO:0006221 | pyrimidine nucleotide biosynthetic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007049 |
cell cycle |
| biological_process |
GO:0045747 |
positive regulation of Notch signaling pathway |
| biological_process |
GO:0006221 |
pyrimidine nucleotide biosynthetic process |
Blast
BLAST of TCONS_00017351 vs. Swiss-Prot (Human)
Match: ERH (Enhancer of rudimentary homolog OS=Homo sapiens GN=ERH PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.023e-44 Identity = 68/97 (70.10%), Postives = 80/97 (82.47%), Query Frame = 3
Query: 189 HTILLVQPMNKLETRTYSDFETINECMEGVCKIYEEHLKRTYPNSPSITYDISQLFDFIDGLTDLSCLVFDKNKQMYAPKGKDFIKDRIYKMLRNQA 479
HTILLVQP + E RTY+D+E++NECMEGVCK+YEEHLKR PNSPSITYDISQLFDFID L DLSCLV+ + Q Y P KD+IK++IY +LR QA
Sbjct: 3 HTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFIDDLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQA 99
The following BLAST results are available for this feature:
|
