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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017332 ID=TCONS_00017332|Name=TCONS_00017332|organism=Clytia hemisphaerica|type=transcript|length=1441bp
ctctaacttgggacgattggtcgaaacatgggactgttgatattctggcc
tgtattttcatttactgttaaatctctttgacaactaatttgttttgata
actccaccaagtttatcattatcaatcatacttcttcgttcctcttagag
tgcacagacactccCGTGTGTCcaatacagatttttttcatattttgatt
taaaagcctactcactcggtgtgaaagagaaatcgtgtattttttaatat
gcagttcattaactcaaatcaaatgactttggaggtttgaagaaatggtg
gccgaattgccgtcccatgttttgtcagatagtcccaatttagagcagtt
gacggtaccttggactgactacccaattcccctcacaaaGTCCCTNTgaa
ttgccatcccatgttttgtcagatagtcccaattTAGAGCAGCTGACGgt
accttggactgactacccaattacCCTCACAAAGTCCCTCGCGCATGGCA
TGGATGGGTTCATAGTTATTATAACTAtgatgggttgacccgggcgaagg
taaaTTCACTTGCCAAGTTATAGGGCGGTCGGAAGTCGCGTATTTTTCAG
CGGTACAAAATACGCGGCAATGGAAAATGTATAATTAAATAAGATTCAGA
ATTTAATATCTACTGTAAATGATAAAGTAACAtatctacatgtttttttt
cttcttagtaGAAAAGAATTTATTTACCTTTGCATTGCAAAAGAAACAGA
AGTCTTTAACGTTCTTCGTTCATTCGCAATCTTTGATTTTCAGAGCTAGG
GTAGCCCTGATTGTTGTGAACAAGATCACGGCAccctaattttgaaaaac
aatggtTACTTCTGTTAAGATTACAATGGAGCAAATCGGTCCCATAACAA
ACGGTTTTTTGAGCTTGAAAGATGGTAGATCAAGGCTTCCTTTTTAAATC
TTGCGATCAGGGGGGTTCCCGCGTTGTCTTTGAGCAAATTTGAATTAAAG
AATtaaatccaaaaattttcaagtaaTCCGTTGACTTTTTATGTGGTGTA
AGGTAACAGCAAAGAGCAAAGAGCTTAGACCTTCCTCTTTCATACTGTgc
aattattttttgtgtatcTATAGCTGCTCCATTGTAAGGGAAGTTAATGT
TATAGTGACCCCCGTCTCTATGGCTCGCACTACCTACGGAAAAACACTCT
TGCCCCAAACTTCCTGTGCATGcatattttttgtaaaacacTTTCGATTT
AATTTTCAGTGCCGTGGAATGTTACAAGATGGCAAGAGGTTTTTGtacag
aaatcttcaaaaaaatggaaCATCAAAATGGAATGTCTGAAAAACTACTA
AAGGTTGGAAGATAAGTGACCCCTTATTTTTTTCTAGGAAGCTTttcatt
aaacattttgaaaatgattttggaATTTCGTCTGACCCCCC Run BLAST on NCBI transcript from alignment at sc0000264:213574..215014 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017332 ID=TCONS_00017332|Name=TCONS_00017332|organism=Clytia hemisphaerica|type=transcript|length=1441bp|location=Sequence derived from alignment at sc0000264:213574..215014 (Clytia hemisphaerica)
GGGGGGTCAGACGAAATtccaaaatcattttcaaaatgtttaatgaaAAG
CTTCCTAGAAAAAAATAAGGGGTCACTTATCTTCCAACCTTTAGTAGTTT
TTCAGACATTCCATTTTGATGttccatttttttgaagatttctgtaCAAA
AACCTCTTGCCATCTTGTAACATTCCACGGCACTGAAAATTAAATCGAAA
gtgttttacaaaaaatatgCATGCACAGGAAGTTTGGGGCAAGAGTGTTT
TTCCGTAGGTAGTGCGAGCCATAGAGACGGGGGTCACTATAACATTAACT
TCCCTTACAATGGAGCAGCTATAgatacacaaaaaataattgcACAGTAT
GAAAGAGGAAGGTCTAAGCTCTTTGCTCTTTGCTGTTACCTTACACCACA
TAAAAAGTCAACGGAttacttgaaaatttttggatttaATTCTTTAATTC
AAATTTGCTCAAAGACAACGCGGGAACCCCCCTGATCGCAAGATTTAAAA
AGGAAGCCTTGATCTACCATCTTTCAAGCTCAAAAAACCGTTTGTTATGG
GACCGATTTGCTCCATTGTAATCTTAACAGAAGTAaccattgtttttcaa
aattagggTGCCGTGATCTTGTTCACAACAATCAGGGCTACCCTAGCTCT
GAAAATCAAAGATTGCGAATGAACGAAGAACGTTAAAGACTTCTGTTTCT
TTTGCAATGCAAAGGTAAATAAATTCTTTTCtactaagaagaaaaaaaac
atgtagataTGTTACTTTATCATTTACAGTAGATATTAAATTCTGAATCT
TATTTAATTATACATTTTCCATTGCCGCGTATTTTGTACCGCTGAAAAAT
ACGCGACTTCCGACCGCCCTATAACTTGGCAAGTGAAtttaccttcgccc
gggtcaacccatcaTAGTTATAATAACTATGAACCCATCCATGCCATGCG
CGAGGGACTTTGTGAGGgtaattgggtagtcagtccaaggtacCGTCAGC
TGCTCTAaattgggactatctgacaaaacatgggatggcaattcANAGGG
ACtttgtgaggggaattgggtagtcagtccaaggtaccgtcaactgctct
aaattgggactatctgacaaaacatgggacggcaattcggccaccatttc
ttcaaacctccaaagtcatttgatttgagttaatgaactgcatattaaaa
aatacacgatttctctttcacaccgagtgagtaggcttttaaatcaaaat
atgaaaaaaatctgtattgGACACACGggagtgtctgtgcactctaagag
gaacgaagaagtatgattgataatgataaacttggtggagttatcaaaac
aaattagttgtcaaagagatttaacagtaaatgaaaatacaggccagaat
atcaacagtcccatgtttcgaccaatcgtcccaagttagag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017332-exon-sc0000264-1491911889:213574..215014 | TCONS_00017332-exon-sc0000264-1491911889:213574..215014 | Clytia hemisphaerica | exon |
| TCONS_00017332-exon-sc0000264-1510915933:213574..215014 | TCONS_00017332-exon-sc0000264-1510915933:213574..215014 | Clytia hemisphaerica | exon |
| TCONS_00017332-exon-sc0000264-1575043694:213574..215014 | TCONS_00017332-exon-sc0000264-1575043694:213574..215014 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000264 | supercontig | sc0000264:213574..215014 . |
Blast
The following BLAST results are available for this feature:
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