TCONS_00017301 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017301
Unique NameTCONS_00017301
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1879

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017301 ID=TCONS_00017301|Name=TCONS_00017301|organism=Clytia hemisphaerica|type=transcript|length=1879bp
GAAAATTCCTAGAAAAATTTCCCTAAAAAGTCTATTTACATTGTCAATAA
AGTCATTGAAATAATTTTGGCGGGCAATTTATCAATGCCAAGAGTGTCAA
ATAACGAGTGTCATGGTCGAACGTTCCAATTGAATAATAGTCCTTTTGAA
TGCTTAGCGAGCGAGACCACTACTTAGAAAGTCATGGAATGATATGACTT
TTTATGATGCCAAAACCTTCTATGATGCTtgacaacaacattttgcaaaA
AGAGAGCAGAAATCAAGTACACGAACAAAGTATATAACTCTTCGAAAATa
aaatcagaTCCATGAAATGGTTTGTCAATGCAGATTCTGCGACGAAAGGT
TTAACAGCCGACAACTCCGCGATAAACATATCAAAGACTACCTGTTTTAC
CCATGCTTGACATGTGCTCAAAAATGCAATTCATTGACTGACCTTGAGCA
ACATTGTAAAGATTCAATTCACAGACCTCCCCCATTGGCTCCGGAAACAC
TAGACGAACAGTTGCAACTATACCTCCAAGGTGCGTACTACCTAGAGAAA
GTCATTGTTACTCGTACCGATCGTCGAAGAGCAAGAATTTTTGTAcaaga
ttttctcaaaaagatCATGAGGAACGTTATAAGACAACCCAATGGTAGAA
TGTACTCACAAATAATCGAACCAGCCGGAAGTACGTCAACCCAAACCAAA
ATCATAGTTGCTGATGAATTTGACTTCAATATTGTCCTAAAGGAAACGTT
TCAACAATTTATTCACAGTGGTCGGACTGTCGTATTTGATATGGAGCATT
ATGACTTTGAACCGTTACATCAACGCATTGGATTGAGAGACCTCTTTCCA
AATGAGAAAGTGGTTGTTCCGAATGGATATGTTGCACCGTTACACAGAAA
CAATGCACCACCTAATATTACCAGGCTGTCGTACTACCAACAATTTATAC
CTAGATGGGTCCAAGAAGAtttgtatgtaaaaattaaaaacgcCCTGGAT
GAAATTGATATCGGCGACCTAGAGGTTAGATTGAAATGTTATCCAAATGG
ACCAGCAATCACGATGTTTATCAAGCACATCCCTGGAATCGATCACGAAA
TCAGTATCGACCTTTCTGCATCAATCAAAACTAACATCCCTGTTAACATC
TACGGATGGCCTAGAAAAGAAACAAAGGACGTCTTATCTGATCttcaaat
tgcaaaaattaagcaAGCAGGCATCATTTTAGTACCAAAACACCAACGAT
TTTGGTATATATCTTTCTCAAAAGCTATTACATCTCTGATGCAATTCATT
GATGGAGCTAATGAGTGCCGACGAACTTGTCACAAGGTTCTGAAACGTGA
TTTCAAGACGTGGCAATCGGAACCATACGCCGGAGGCTTGAAAGGAATTT
CCACCTATTTGTTTAAGCATCACTTGTTTTGGATAAATGAAGAAAAGTTC
GACGAGAAGGAAAATTATTGGGCTAATCAAAACATCGGCCAATGCTACAT
GGATATGCTGGAATCACTGGCAGAGAAATGTCGAGCAAAACATCTTCCAA
ACTATTTCAATATCCAAGAAAATATATTGGAGAATAAGCAAACCAGAGTT
TTAAACAAGCTGGCAAAGTTTTGTGAAGAACGAAGATTGGAATTACTTCA
CATCCATATGAGGTGAACGCACTGAATGCGAATATTAAATTGCAACCTTT
TTATGGTCAAGACCCTATAACACGAATATTTCTGTAATATTTTACATTAT
GattgagttttgaaaaagtGTCTGTCACAAAAAATTGTAGTGATTGCCTA
AGGTTTGTCAGGTggctttttcgaaaaattataaacaaaaaaatgtttct
ttctgaaaaagaaaacagttTACACATAG
Run BLAST on NCBI

protein sequence of TCONS_00017301-protein

>TCONS_00017301-protein ID=TCONS_00017301-protein|Name=TCONS_00017301-protein|organism=Clytia hemisphaerica|type=polypeptide|length=449bp
MVCQCRFCDERFNSRQLRDKHIKDYLFYPCLTCAQKCNSLTDLEQHCKDS
IHRPPPLAPETLDEQLQLYLQGAYYLEKVIVTRTDRRRARIFVQDFLKKI
MRNVIRQPNGRMYSQIIEPAGSTSTQTKIIVADEFDFNIVLKETFQQFIH
SGRTVVFDMEHYDFEPLHQRIGLRDLFPNEKVVVPNGYVAPLHRNNAPPN
ITRLSYYQQFIPRWVQEDLYVKIKNALDEIDIGDLEVRLKCYPNGPAITM
FIKHIPGIDHEISIDLSASIKTNIPVNIYGWPRKETKDVLSDLQIAKIKQ
AGIILVPKHQRFWYISFSKAITSLMQFIDGANECRRTCHKVLKRDFKTWQ
SEPYAGGLKGISTYLFKHHLFWINEEKFDEKENYWANQNIGQCYMDMLES
LAEKCRAKHLPNYFNIQENILENKQTRVLNKLAKFCEERRLELLHIHMR
Run BLAST on NCBI

transcript from alignment at sc0000264:94456..99645-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017301 ID=TCONS_00017301|Name=TCONS_00017301|organism=Clytia hemisphaerica|type=transcript|length=5190bp|location=Sequence derived from alignment at sc0000264:94456..99645- (Clytia hemisphaerica)
GAAAATTCCTAGAAAAATTTCCCTAAAAAGTCTATTTACATTGTCAATAA
AGTCATTGAAATAATTTTGGCGGGCAATTTATCAATGCCAAGAGTGTCAA
ATAACGAGTGTCATGGTCGAACGTTCCAATTGAATAATAGTCCTTTTGAA
TGCTTAGCGAGCGAGACCACTACTTAGAAAGTCATGGAATGATATGACTT
TTTATGATGCCAAAACCTTCTATGATGCTTGACAACAACATTTTGCAAAA
AGAGAGCAGAAATCAAGTACACGAACAAAGTATATAACTCTTCGAAAATG
TAAGTGTATAATTTAAGTTTTTCTTTAAATTTATTTCAAACGTTTATTCT
TTCAACGCAATTCTTTTTGTCCCACGCATATTCTTGGATGGTCCTCGAAT
CTTAAAATTTCAACGTAATTACTCTAGATATTTTTTACGAACATCAGATA
AAAAGGGTATTGCTGAGCTTCAAGCAGAGATGCATCAAGTACCATTTTCA
ACTAAGTACGAAATCTTTGGTATGACCCGACCGGGGGTTGAATCCAAGAC
CTTATTGCGCCGTAGCTAAATGCCCTAACTTTATACTACATACGGTTCAG
TAGCGTAGACAGGAGGGGCGCAAAATTTGTGTAGGAGAGCAGATTTTTAT
GAGACTCTAATTATCTTTTTACATAATGAATAGATAATTACAGTATCATA
AAAATCTGCTCTCCTACACAAATTCTGCGCCCCTCCTGCTGTCTACGCTG
CTCCAGTCAGCTGATAATATATTCCTTATTTGATTTTAGAAAATCAGATC
CATGAAATGGTTTGTCAATGCAGATTCTGCGACGAAAGGTTTAACAGCCG
ACAACTCCGCGATAAACATATCAAAGACTACCTGTTTTACCCATGCTTGA
CATGTGCTCAAAAATGCAATTCATTGACTGACCTTGAGCAACATTGTAAA
GATTCAATTCACAGACCTCCCCCATTGGCTCCGGAAACACTAGACGAACA
GTTGCAACTATACCTCCAAGGTAAAATTGTTTCTGATTTGATTATAATTG
GTTCAATTTATCATAGCTTGAAAAGTTTCATTCTTTTTATTCTTACGCCA
ATAATATAATGACAATTTTTCAATTTTCATTACTATGATAAAACCATGCG
GTCACCTTCTTTGTTTAACCTTCTTTATGACTATGAGTGTGGCCGCTAGT
CTTGCTTTTTAACCTTTTAAGACCAAATGTATCATTCCTTTTCACTTACT
TACTTATCTAGGTGCGTACTACCTAGAGAAAGTCATTGTTACTCGTACCG
ATCGTCGAAGAGCAAGAATTTTTGTACAAGATTTTCTCAAAAAGATCATG
AGGAACGTTATAAGACAACCCAATGGTAGAATGTACTCACAAATAATCGA
ACCAGCCGGAAGTACGTCAACCCAAACCAAAATCATAGTTGCTGATGAAT
TTGACTTCAATATTGTCCTAAAGGAAACGTTTCAACAATTTATTCACAGT
GGTCGGACTGTCGTATTTGATATGGAGCATGTATGTTTTTTCATTCTTAT
GAATCATGGGTAATCAGGACTGATTGTGCTTTAATAACATCTTCCTGTTT
GTCAGACGTAAACACCCCTGTCTCACAGCCCTATTGGAACTTTTTAGAAA
TTCCTATTGAAATCCCAATGGGGATAGAAATTCTATTGTTCAAAGGTTAA
AAAATCCAGAGTGCAATTTTTAAACATTTAATTTCGAGTGGGGATGAAAT
ATAAGTCAATTTCCCAGTGGGGCTAAAATTCCAGGGTATCATCCTACTGG
GACGAAATTTTTGCCAGATTTTCCAGTGGGGCTGGGTCCCAGCGGGTCTG
TGACACAGGAGTGTACATAACAATCTTCTAGATTTCGGCTAGCAGGAGAA
CCGTTATTTTTGCGAAGTCCTGAAGTACTCATTACACATGGGGGCCCCGT
AAAATGTGGGTATGGGCTTTCCTCTTGAACTAAAAGTGCGACAAGCGCAC
TTAGTGCAAAGATTGACCCAAGCTAAGGCACATTTTTGGCTTTATCTGTA
TTCTCTATTTATAACATATGGAATATGATTATGTACTAATTTTTCCCGAG
ATTTTTCGGTCCGTTCTGATTAAAGGAATTAGCAAGTTTATGTATCTGTG
TTTATCAGCGACGGAGATGATTGGCTTCCGATTTGTCTAGATCCTAATTA
GCTGAGACACTTTACCATCCTCGACTTTTCGGGTCAGAACTGGGGGTTTT
TCCAAATTGCTTCTGTCACTCCGCCAGTACAAATACATAAAGTTGCCATT
TCACCATAGTATGACTTTGAACCGTTACATCAACGCATTGGATTGAGAGA
CCTCTTTCCAAATGAGAAAGTGGTTGTTCCGAATGGATATGTTGCACCGT
TACACAGAAACAATGCACCACCTAATATTACCAGGCTGTCGTACTACCAA
CAATTTATACCTAGATGGGTCCAAGAAGATTTGTATGTAAAAATTAAAAA
CGCCCTGGATGAAATTGATATCGGCGACCTAGGTACGTTCCGTTCATTGT
TTTAAATTCATTTTGGGGAACGAACAGTATGACGTCTTAAATTTAGGGGA
AGAGAACGCTATTGTTTGGCCTAATGTGTTTAGTGTGCAAAACATTTTAT
GGTGTCAAACCATTGTTTGTTTTCCCCTTCAAATAATTAGATCTTATTGG
TTGAAAGGTTTATCACGTGACTTTACGTCCCGGGGGGGGGGGGGGCAGCT
GGGCAAAATGACCGACGGGTACCTTTTCCAAGATGTTTAAAATGCACTGT
AAGGGTCGGAAAAACTAAAGATGCACTAAGGGTATTCAGAAAATTCATGA
AAAATCTAGATATTTTGACCAAAAATGCTAGAGTTTTGATCATTTTTTAA
AACGAAAAGGATTGAAAATTTGGGGGAAAACGCAGTCTAAGGGTATGATT
TTCACCGATTTTTGCTGCACTGTAAGAGTGCAATTTTAAAAGCAAATTTT
TGGCCCGCACATACCGTCAGTCCGCAAACCCAGTGCCCCCCGGGCTTTGC
GTTACGAATAATGCCTTTATATCAATGCTTCCAGATAAATTTTCATTTGT
GTACCTCTAAATACATGGGTTTAATTTTCACAATATTTTTCTTCGTTGGA
TTTACTAGAGGTTAGATTGAAATGTTATCCAAATGGACCAGCAATCACGA
TGTTTATCAAGCACATCCCTGGAATCGATCACGAAATCAGTATCGACCTT
TCTGCATCAATCAAAACTAACATCCCTGTTAACATCTACGGATGGCCTAG
AAAAGAAACAAAGGACGTCTTATCTGATCTTCAAATTGCAAAAATTAAGC
AAGCAGGCATCATTTTAGTACCAAAACACCAACGATTTTGGTATATATCT
TTCTCAAAAGCTATTACATCTCTGATGCAATTCATTGATGGAGCTAATGA
GTGCCGACGAACTTGTCACAAGGTTCTGAAACGTGATTTCAAGACGTGGC
AATCGGAACCATACGCCGGAGGCTTGAAAGGAATTTCCACCTATTTGTTT
AAGGTAATGCAAATTTTTTCACTTTTTCTTATACTTTTATTGTGAAATTG
GTCTAATGCTTCAGCATCACGAACTAAGGTTGAATCAACATTACCTGCAT
TGTGACTGTTTAGTTATCCTGGGATGGGTGAAGGTATTAGGATTTAGGGA
GGCTGAGTATGTGCGTGCCAGATTAGATGACCTCTTAATGTGACCCTTAG
AGATCAGATATTTTTTACAAAAACTCCTTTGGAAATTCCTTTCAAGCCTC
CGGCGTATGGTTCCGATTGCCACGTCTTGAAATCACGTTTCAGAATCTTG
TGACAAGTTCGTCGGCACTCATTAGCTCCATCAATGAATTGCATCAGAGA
TGTGACAGCTTTTGAGAAATATTTTCTCCATTTAAAAAAAAATTCCAACT
ATTTTGAATTTCTGTCATTTTTTGGTCTGCTAATGTGAAAAACCTAAGAT
CATTAGGAAACACTTCTTGACTTCTTGTTCTTTTTACACCAACTCGGATG
GAGCACCCATTTTTGCTTAAATTCCCTCGGGTACGTCTGTTTGAATTAAA
GATTGTTGTGCTTTTCATGTTAACCCTTAAGTGTTAATATCGTATATATC
AGACATGGGTTACATGGGCTGTAATGCCCAGTTTGAGTTAGAAATTGTCA
TTTTTGGTCTAACTCGTAGGAATTAGATTGGGCTTCATGGTCAAGCAAAA
AAATCAAAAGTGAGTCTTTCCAGCGAGATTTTAAGCCAAAAATGCAAAAA
AATGCAAAAATTTGACAAAAATCCTCTTTTTTAAGATTTTGACCGTTTTT
TGAAAATCTTTGGTCAACAATTGATCCAAGAACCTCCAAATTTGGCCCTG
TTTTACTTGATTCTGTCCTCCAGCGAATTAAATTGAAGTTTTATCATTGC
ATTGGGCATCCTTCCATCATTCAGGCAGGTACTTTAATTTCCATTACCTA
CCCCCCCCTCTTAACTGCCGCCCACCCCACCCTTCCTAAATCGGAAAGAG
AAGACTCTAAGCTATCCAACGAGCTATGAACGAACTTCTAACTCCTTCTA
GTTCTCGAGATATAAGCCTTTAAAGTTTGAACTAGCAATTTTCTTTTAAA
AAAATGACCGTGGCACTTAAAGTGTTAAATATCATCAACTATAGATCAAT
CCCACGTTAATATGTATCCACCTTTAAGCATCACTTGTTTTGGATAAATG
AAGAAAAGTTCGACGAGAAGGAAAATTATTGGGCTAATCAAAACATCGGC
CAATGCTACATGGATATGCTGGAATCACTGGCAGAGAAATGTCGAGCAAA
ACATCTTCCAAACTATTTCAATATCCAAGAAAATATATTGGAGAATAAGC
AAACCAGAGTTTTAAACAAGCTGGCAAAGTTTTGTGAAGAACGAAGATTG
GAATTACTTCACATCCATATGAGGTGAACGCACTGAATGCGAATATTAAA
TTGCAACCTTTTTATGGTCAAGACCCTATAACACGAATATTTCTGTAATA
TTTTACATTATGATTGAGTTTTGAAAAAGTGTCTGTCACAAAAAATTGTA
GTGATTGCCTAAGGTTTGTCAGGTGGCTTTTTCGAAAAATTATAAACAAA
AAAATGTTTCTTTCTGAAAAAGAAAACAGTTTACACATAG

Coding sequence (CDS) from alignment at sc0000264:94456..99645-

>TCONS_00017301 ID=TCONS_00017301|Name=TCONS_00017301|organism=Clytia hemisphaerica|type=CDS|length=6750bp|location=Sequence derived from alignment at sc0000264:94456..99645- (Clytia hemisphaerica)
CATCACTTGTTTTGGATAAATGAAGAAAAGTTCGACGAGAAGGAAAATTA
TTGGGCTAATCAAAACATCGGCCAATGCTACATGGATATGCTGGAATCAC
TGGCAGAGAAATGTCGAGCAAAACATCTTCCAAACTATTTCAATATCCAA
GAAAATATATTGGAGAATAAGCAAACCAGAGTTTTAAACAAGCTGGCAAA
GTTTTGTGAAGAACGAAGATTGGAATTACTTCACATCCATATGAGGTGAA
GGTTAGATTGAAATGTTATCCAAATGGACCAGCAATCACGATGTTTATCA
AGCACATCCCTGGAATCGATCACGAAATCAGTATCGACCTTTCTGCATCA
ATCAAAACTAACATCCCTGTTAACATCTACGGATGGCCTAGAAAAGAAAC
AAAGGACGTCTTATCTGATCTTCAAATTGCAAAAATTAAGCAAGCAGGCA
TCATTTTAGTACCAAAACACCAACGATTTTGGTATATATCTTTCTCAAAA
GCTATTACATCTCTGATGCAATTCATTGATGGAGCTAATGAGTGCCGACG
AACTTGTCACAAGGTTCTGAAACGTGATTTCAAGACGTGGCAATCGGAAC
CATACGCCGGAGGCTTGAAAGGAATTTCCACCTATTTGTTTAAGTATGAC
TTTGAACCGTTACATCAACGCATTGGATTGAGAGACCTCTTTCCAAATGA
GAAAGTGGTTGTTCCGAATGGATATGTTGCACCGTTACACAGAAACAATG
CACCACCTAATATTACCAGGCTGTCGTACTACCAACAATTTATACCTAGA
TGGGTCCAAGAAGATTTGTATGTAAAAATTAAAAACGCCCTGGATGAAAT
TGATATCGGCGACCTAGGTGCGTACTACCTAGAGAAAGTCATTGTTACTC
GTACCGATCGTCGAAGAGCAAGAATTTTTGTACAAGATTTTCTCAAAAAG
ATCATGAGGAACGTTATAAGACAACCCAATGGTAGAATGTACTCACAAAT
AATCGAACCAGCCGGAAGTACGTCAACCCAAACCAAAATCATAGTTGCTG
ATGAATTTGACTTCAATATTGTCCTAAAGGAAACGTTTCAACAATTTATT
CACAGTGGTCGGACTGTCGTATTTGATATGGAGCATATGGTTTGTCAATG
CAGATTCTGCGACGAAAGGTTTAACAGCCGACAACTCCGCGATAAACATA
TCAAAGACTACCTGTTTTACCCATGCTTGACATGTGCTCAAAAATGCAAT
TCATTGACTGACCTTGAGCAACATTGTAAAGATTCAATTCACAGACCTCC
CCCATTGGCTCCGGAAACACTAGACGAACAGTTGCAACTATACCTCCAAG
CATCACTTGTTTTGGATAAATGAAGAAAAGTTCGACGAGAAGGAAAATTA
TTGGGCTAATCAAAACATCGGCCAATGCTACATGGATATGCTGGAATCAC
TGGCAGAGAAATGTCGAGCAAAACATCTTCCAAACTATTTCAATATCCAA
GAAAATATATTGGAGAATAAGCAAACCAGAGTTTTAAACAAGCTGGCAAA
GTTTTGTGAAGAACGAAGATTGGAATTACTTCACATCCATATGAGGTGAA
GGTTAGATTGAAATGTTATCCAAATGGACCAGCAATCACGATGTTTATCA
AGCACATCCCTGGAATCGATCACGAAATCAGTATCGACCTTTCTGCATCA
ATCAAAACTAACATCCCTGTTAACATCTACGGATGGCCTAGAAAAGAAAC
AAAGGACGTCTTATCTGATCTTCAAATTGCAAAAATTAAGCAAGCAGGCA
TCATTTTAGTACCAAAACACCAACGATTTTGGTATATATCTTTCTCAAAA
GCTATTACATCTCTGATGCAATTCATTGATGGAGCTAATGAGTGCCGACG
AACTTGTCACAAGGTTCTGAAACGTGATTTCAAGACGTGGCAATCGGAAC
CATACGCCGGAGGCTTGAAAGGAATTTCCACCTATTTGTTTAAGTATGAC
TTTGAACCGTTACATCAACGCATTGGATTGAGAGACCTCTTTCCAAATGA
GAAAGTGGTTGTTCCGAATGGATATGTTGCACCGTTACACAGAAACAATG
CACCACCTAATATTACCAGGCTGTCGTACTACCAACAATTTATACCTAGA
TGGGTCCAAGAAGATTTGTATGTAAAAATTAAAAACGCCCTGGATGAAAT
TGATATCGGCGACCTAGGTGCGTACTACCTAGAGAAAGTCATTGTTACTC
GTACCGATCGTCGAAGAGCAAGAATTTTTGTACAAGATTTTCTCAAAAAG
ATCATGAGGAACGTTATAAGACAACCCAATGGTAGAATGTACTCACAAAT
AATCGAACCAGCCGGAAGTACGTCAACCCAAACCAAAATCATAGTTGCTG
ATGAATTTGACTTCAATATTGTCCTAAAGGAAACGTTTCAACAATTTATT
CACAGTGGTCGGACTGTCGTATTTGATATGGAGCATATGGTTTGTCAATG
CAGATTCTGCGACGAAAGGTTTAACAGCCGACAACTCCGCGATAAACATA
TCAAAGACTACCTGTTTTACCCATGCTTGACATGTGCTCAAAAATGCAAT
TCATTGACTGACCTTGAGCAACATTGTAAAGATTCAATTCACAGACCTCC
CCCATTGGCTCCGGAAACACTAGACGAACAGTTGCAACTATACCTCCAAG
CATCACTTGTTTTGGATAAATGAAGAAAAGTTCGACGAGAAGGAAAATTA
TTGGGCTAATCAAAACATCGGCCAATGCTACATGGATATGCTGGAATCAC
TGGCAGAGAAATGTCGAGCAAAACATCTTCCAAACTATTTCAATATCCAA
GAAAATATATTGGAGAATAAGCAAACCAGAGTTTTAAACAAGCTGGCAAA
GTTTTGTGAAGAACGAAGATTGGAATTACTTCACATCCATATGAGGTGAA
GGTTAGATTGAAATGTTATCCAAATGGACCAGCAATCACGATGTTTATCA
AGCACATCCCTGGAATCGATCACGAAATCAGTATCGACCTTTCTGCATCA
ATCAAAACTAACATCCCTGTTAACATCTACGGATGGCCTAGAAAAGAAAC
AAAGGACGTCTTATCTGATCTTCAAATTGCAAAAATTAAGCAAGCAGGCA
TCATTTTAGTACCAAAACACCAACGATTTTGGTATATATCTTTCTCAAAA
GCTATTACATCTCTGATGCAATTCATTGATGGAGCTAATGAGTGCCGACG
AACTTGTCACAAGGTTCTGAAACGTGATTTCAAGACGTGGCAATCGGAAC
CATACGCCGGAGGCTTGAAAGGAATTTCCACCTATTTGTTTAAGTATGAC
TTTGAACCGTTACATCAACGCATTGGATTGAGAGACCTCTTTCCAAATGA
GAAAGTGGTTGTTCCGAATGGATATGTTGCACCGTTACACAGAAACAATG
CACCACCTAATATTACCAGGCTGTCGTACTACCAACAATTTATACCTAGA
TGGGTCCAAGAAGATTTGTATGTAAAAATTAAAAACGCCCTGGATGAAAT
TGATATCGGCGACCTAGGTGCGTACTACCTAGAGAAAGTCATTGTTACTC
GTACCGATCGTCGAAGAGCAAGAATTTTTGTACAAGATTTTCTCAAAAAG
ATCATGAGGAACGTTATAAGACAACCCAATGGTAGAATGTACTCACAAAT
AATCGAACCAGCCGGAAGTACGTCAACCCAAACCAAAATCATAGTTGCTG
ATGAATTTGACTTCAATATTGTCCTAAAGGAAACGTTTCAACAATTTATT
CACAGTGGTCGGACTGTCGTATTTGATATGGAGCATATGGTTTGTCAATG
CAGATTCTGCGACGAAAGGTTTAACAGCCGACAACTCCGCGATAAACATA
TCAAAGACTACCTGTTTTACCCATGCTTGACATGTGCTCAAAAATGCAAT
TCATTGACTGACCTTGAGCAACATTGTAAAGATTCAATTCACAGACCTCC
CCCATTGGCTCCGGAAACACTAGACGAACAGTTGCAACTATACCTCCAAG
CATCACTTGTTTTGGATAAATGAAGAAAAGTTCGACGAGAAGGAAAATTA
TTGGGCTAATCAAAACATCGGCCAATGCTACATGGATATGCTGGAATCAC
TGGCAGAGAAATGTCGAGCAAAACATCTTCCAAACTATTTCAATATCCAA
GAAAATATATTGGAGAATAAGCAAACCAGAGTTTTAAACAAGCTGGCAAA
GTTTTGTGAAGAACGAAGATTGGAATTACTTCACATCCATATGAGGTGAA
GGTTAGATTGAAATGTTATCCAAATGGACCAGCAATCACGATGTTTATCA
AGCACATCCCTGGAATCGATCACGAAATCAGTATCGACCTTTCTGCATCA
ATCAAAACTAACATCCCTGTTAACATCTACGGATGGCCTAGAAAAGAAAC
AAAGGACGTCTTATCTGATCTTCAAATTGCAAAAATTAAGCAAGCAGGCA
TCATTTTAGTACCAAAACACCAACGATTTTGGTATATATCTTTCTCAAAA
GCTATTACATCTCTGATGCAATTCATTGATGGAGCTAATGAGTGCCGACG
AACTTGTCACAAGGTTCTGAAACGTGATTTCAAGACGTGGCAATCGGAAC
CATACGCCGGAGGCTTGAAAGGAATTTCCACCTATTTGTTTAAGTATGAC
TTTGAACCGTTACATCAACGCATTGGATTGAGAGACCTCTTTCCAAATGA
GAAAGTGGTTGTTCCGAATGGATATGTTGCACCGTTACACAGAAACAATG
CACCACCTAATATTACCAGGCTGTCGTACTACCAACAATTTATACCTAGA
TGGGTCCAAGAAGATTTGTATGTAAAAATTAAAAACGCCCTGGATGAAAT
TGATATCGGCGACCTAGGTGCGTACTACCTAGAGAAAGTCATTGTTACTC
GTACCGATCGTCGAAGAGCAAGAATTTTTGTACAAGATTTTCTCAAAAAG
ATCATGAGGAACGTTATAAGACAACCCAATGGTAGAATGTACTCACAAAT
AATCGAACCAGCCGGAAGTACGTCAACCCAAACCAAAATCATAGTTGCTG
ATGAATTTGACTTCAATATTGTCCTAAAGGAAACGTTTCAACAATTTATT
CACAGTGGTCGGACTGTCGTATTTGATATGGAGCATATGGTTTGTCAATG
CAGATTCTGCGACGAAAGGTTTAACAGCCGACAACTCCGCGATAAACATA
TCAAAGACTACCTGTTTTACCCATGCTTGACATGTGCTCAAAAATGCAAT
TCATTGACTGACCTTGAGCAACATTGTAAAGATTCAATTCACAGACCTCC
CCCATTGGCTCCGGAAACACTAGACGAACAGTTGCAACTATACCTCCAAG
CATCACTTGTTTTGGATAAATGAAGAAAAGTTCGACGAGAAGGAAAATTA
TTGGGCTAATCAAAACATCGGCCAATGCTACATGGATATGCTGGAATCAC
TGGCAGAGAAATGTCGAGCAAAACATCTTCCAAACTATTTCAATATCCAA
GAAAATATATTGGAGAATAAGCAAACCAGAGTTTTAAACAAGCTGGCAAA
GTTTTGTGAAGAACGAAGATTGGAATTACTTCACATCCATATGAGGTGAA
GGTTAGATTGAAATGTTATCCAAATGGACCAGCAATCACGATGTTTATCA
AGCACATCCCTGGAATCGATCACGAAATCAGTATCGACCTTTCTGCATCA
ATCAAAACTAACATCCCTGTTAACATCTACGGATGGCCTAGAAAAGAAAC
AAAGGACGTCTTATCTGATCTTCAAATTGCAAAAATTAAGCAAGCAGGCA
TCATTTTAGTACCAAAACACCAACGATTTTGGTATATATCTTTCTCAAAA
GCTATTACATCTCTGATGCAATTCATTGATGGAGCTAATGAGTGCCGACG
AACTTGTCACAAGGTTCTGAAACGTGATTTCAAGACGTGGCAATCGGAAC
CATACGCCGGAGGCTTGAAAGGAATTTCCACCTATTTGTTTAAGTATGAC
TTTGAACCGTTACATCAACGCATTGGATTGAGAGACCTCTTTCCAAATGA
GAAAGTGGTTGTTCCGAATGGATATGTTGCACCGTTACACAGAAACAATG
CACCACCTAATATTACCAGGCTGTCGTACTACCAACAATTTATACCTAGA
TGGGTCCAAGAAGATTTGTATGTAAAAATTAAAAACGCCCTGGATGAAAT
TGATATCGGCGACCTAGGTGCGTACTACCTAGAGAAAGTCATTGTTACTC
GTACCGATCGTCGAAGAGCAAGAATTTTTGTACAAGATTTTCTCAAAAAG
ATCATGAGGAACGTTATAAGACAACCCAATGGTAGAATGTACTCACAAAT
AATCGAACCAGCCGGAAGTACGTCAACCCAAACCAAAATCATAGTTGCTG
ATGAATTTGACTTCAATATTGTCCTAAAGGAAACGTTTCAACAATTTATT
CACAGTGGTCGGACTGTCGTATTTGATATGGAGCATATGGTTTGTCAATG
CAGATTCTGCGACGAAAGGTTTAACAGCCGACAACTCCGCGATAAACATA
TCAAAGACTACCTGTTTTACCCATGCTTGACATGTGCTCAAAAATGCAAT
TCATTGACTGACCTTGAGCAACATTGTAAAGATTCAATTCACAGACCTCC
CCCATTGGCTCCGGAAACACTAGACGAACAGTTGCAACTATACCTCCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009679XLOC_009679Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017301-exon-sc0000264-1575043694:99347..99645TCONS_00017301-exon-sc0000264-1575043694:99347..99645Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1575043694:98626..98856TCONS_00017301-exon-sc0000264-1575043694:98626..98856Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1575043694:98116..98384TCONS_00017301-exon-sc0000264-1575043694:98116..98384Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1575043694:97114..97336TCONS_00017301-exon-sc0000264-1575043694:97114..97336Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1575043694:96093..96487TCONS_00017301-exon-sc0000264-1575043694:96093..96487Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1575043694:94456..94917TCONS_00017301-exon-sc0000264-1575043694:94456..94917Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1510915933:99347..99645TCONS_00017301-exon-sc0000264-1510915933:99347..99645Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1510915933:98626..98856TCONS_00017301-exon-sc0000264-1510915933:98626..98856Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1510915933:98116..98384TCONS_00017301-exon-sc0000264-1510915933:98116..98384Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1510915933:97114..97336TCONS_00017301-exon-sc0000264-1510915933:97114..97336Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1510915933:96093..96487TCONS_00017301-exon-sc0000264-1510915933:96093..96487Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1510915933:94456..94917TCONS_00017301-exon-sc0000264-1510915933:94456..94917Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1491911889:99347..99645TCONS_00017301-exon-sc0000264-1491911889:99347..99645Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1491911889:98626..98856TCONS_00017301-exon-sc0000264-1491911889:98626..98856Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1491911889:98116..98384TCONS_00017301-exon-sc0000264-1491911889:98116..98384Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1491911889:97114..97336TCONS_00017301-exon-sc0000264-1491911889:97114..97336Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1491911889:96093..96487TCONS_00017301-exon-sc0000264-1491911889:96093..96487Clytia hemisphaericaexon
TCONS_00017301-exon-sc0000264-1491911889:94456..94917TCONS_00017301-exon-sc0000264-1491911889:94456..94917Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017301-proteinTCONS_00017301-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000264supercontigsc0000264:94456..99645 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0240537	0	0.0286489	0	0	0.133861	0.187438	1.16086	0.753311	0.962896	9.9854	7.84453	22.9241	22.1613	12.5979	13.6918	19.6253	14.4745	6.02165	5.9792	2.29531	3.47796	3.85993	2.77077	0.23304	0.488252	0.987524	1.38343
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR024810Mab-21_dom
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017301 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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