TCONS_00017170 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017170
Unique NameTCONS_00017170
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1237

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017170 ID=TCONS_00017170|Name=TCONS_00017170|organism=Clytia hemisphaerica|type=transcript|length=1237bp
AAAGATGGTGTAACGAGCTCGAAAGATGGTGTAACGAGTTCGAAAGATAA
TGTAACGAGCTCCAAAGAAGATTTAGAAGACCAAACCAAGGTTACTTTAa
ataaagaggaaaagaagaatTCTGGAAGCGACGAAGTTGCTGATGTCGAC
AAAGCTGATTTCGAGGAAGTGGAAAATGGTGAGAATAAGAAATACGGAGA
AgtgaagaatgaaaaagaacaaaaggacgagaaaaagaagaacgaaCAAA
ATGACGAAGAAGCGATTTTGAAACTCGGAGATGAAGAAAAAGACAAGGAA
ATGGAGAAGGAGGTTGCCCAACAGgaaattgacaaaataaaaacagccCA
AAAAGAAACTGCCCGAAAAGAAACGGAGCGAAAAGAAAGTGCCGAAAAGA
AAATTGATCAACTTGCAGTCCAACAAGCAGCTGCCCaaatggaaattgaa
aaaattaaaacggCCCAAAAAGAGGCTGCCCGAATTGAAATTGAGAAAAT
CAAAGCTGCCCAAAAAGAAGCAATACAAAATGTAGCTGCCCAAAGAGAAG
CTGCCcgaaaagaaatagaaaaaataaaatcggCCCAACATGAAGCAGCc
ctaaaagaaattgaaaacattaaaaaaacccGAAACAAAGCAGCCCAAAA
GGGAATTAACCAAAAAGAAACTGGTAGCACTGAGTTGACAGATGATATCA
AGAAAAATCAACAGGAACAAAAACTGAAGTGTAAAAACAAGACTATCAAC
GCTGTTTTTGATGACTGCACTGTAGAATTTGATCTTGATTTCGAAGATTT
GATGAAACTCAACAGAGAATACTCGATAACATATCCTCCAAATACTTTTC
AAATACCTTGTGATCATGAACCATGTGATTGGGATCTTCGACCAATCAAA
GCCTTGTATCATACTGAAGAACCAATCAGCTTCCAGCATCATCTTAATGA
ACCAATAAGAATGCTGCATTATCATCAACGCAAAGGGAAACACGTGTCAC
ATGATATTCACGTATTTGATGGCCGTAATCATAAACaacattttgTTTCG
CACGAGTCACCGTGCATGAACCGTGGTATCGCTTTACCGACGAAACACGA
TTATCAATGTATCTGTAGAAAGGGATTTTACGGAGCTGTTTGTTCTGGAA
TTGATCATTGTGCGAGAAGGCCCTGTTTACACGGTGGGCATTGTCACGTG
AATGACGTCACGCCTGGTTACACGTGTTCGTGCCCAC
Run BLAST on NCBI

protein sequence of TCONS_00017170-protein

>TCONS_00017170-protein ID=TCONS_00017170-protein|Name=TCONS_00017170-protein|organism=Clytia hemisphaerica|type=polypeptide|length=412bp
KDGVTSSKDGVTSSKDNVTSSKEDLEDQTKVTLNKEEKKNSGSDEVADVD
KADFEEVENGENKKYGEVKNEKEQKDEKKKNEQNDEEAILKLGDEEKDKE
MEKEVAQQEIDKIKTAQKETARKETERKESAEKKIDQLAVQQAAAQMEIE
KIKTAQKEAARIEIEKIKAAQKEAIQNVAAQREAARKEIEKIKSAQHEAA
LKEIENIKKTRNKAAQKGINQKETGSTELTDDIKKNQQEQKLKCKNKTIN
AVFDDCTVEFDLDFEDLMKLNREYSITYPPNTFQIPCDHEPCDWDLRPIK
ALYHTEEPISFQHHLNEPIRMLHYHQRKGKHVSHDIHVFDGRNHKQHFVS
HESPCMNRGIALPTKHDYQCICRKGFYGAVCSGIDHCARRPCLHGGHCHV
NDVTPGYTCSCP
Run BLAST on NCBI

transcript from alignment at sc0000260:80814..84147-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017170 ID=TCONS_00017170|Name=TCONS_00017170|organism=Clytia hemisphaerica|type=transcript|length=3334bp|location=Sequence derived from alignment at sc0000260:80814..84147- (Clytia hemisphaerica)
AAAGATGGTGTAACGAGCTCGAAAGATGGTGTAACGAGTTCGAAAGATAA
TGTAACGAGCTCCAAAGAAGATTTAGAAGACCAAACCAAGGTTACTTTAA
ATAAAGAGGAAAAGAAGAATTCTGGAAGCGACGAAGTTGCTGATGTCGAC
AAAGCTGATTTCGAGGAAGTGGAAAATGGTGAGAATAAGAAATACGGAGA
AGTGAAGAATGAAAAAGAACAAAAGGACGAGAAAAAGAAGAACGAACAAA
ATGACGAAGAAGCGATTTTGAAACTCGGAGATGAAGAAAAAGACAAGGAA
ATGGAGAAGGAGGTTGCCCAACAGGAAATTGACAAAATAAAAACAGCCCA
AAAAGAAACTGCCCGAAAAGAAACGGAGCGAAAAGAAAGTGCCGAAAAGA
AAATTGATCAACTTGCAGTCCAACAAGCAGCTGCCCAAATGGAAATTGAA
AAAATTAAAACGGCCCAAAAAGAGGCTGCCCGAATTGAAATTGAGAAAAT
CAAAGCTGCCCAAAAAGAAGCAATACAAAATGTAGCTGCCCAAAGAGAAG
CTGCCCGAAAAGAAATAGAAAAAATAAAATCGGCCCAACATGAAGCAGCC
CTAAAAGAAATTGAAAACATTAAAAAAACCCGAAACAAAGCAGCCCAAAA
GGGAATTAACCAAAAAGAAACTGGTAGCACTGAGTTGACAGATGATATCA
AGAAAAATCAACAGGAACAAAAACTGAAGTGTAAAAACAAGACTATCAAC
GGTATGTAATTTCAATAGTTTGCAGAATTTGAAAGTTTAAAAGTTTTTTT
GCTCAAACATAGACCAAATGGAACACATGAAATAACTATATAAGGTTAAA
CAATTTATTGCCACGCAATAGGTCCAAAATATACTTTTGCCAGATCGATT
CTCAATATTCCAGGAATATAGGGGGATAATAAAATAGCTGTGGCTCAATC
CGTATATTGTGGTCTGCAAACTTTCCCTTATTATTCGTCAATATATCGTG
TAGCCTAAGTATTAGGATGTATCAGCATCATAGAAAGGACGTTGTTTTAA
TGTTAGCTCTGACAGCTGGATACCACTTAGGTTCTTTGAAACATAATTAC
CATTTTTTTACAGCTGTTTTTGATGACTGCACTGTAGAATTTGATCTTGA
TTTCGAAGATTTGATGAAACTCAACAGAGAATACTCGATAACATATCCTC
CAAATACTTTTCAAATACCTTGTGATCATGAACCATGTGATTGGGATCTT
CGACCAATCAAAGCCTTGTATCATACTGAAGAACCAATCAGCTTCCAGCA
TCATCTTAATGAACCAATAAGAATGCTGCATTATCATCAACGCAAAGGGA
AACACGTGTCACATGATATTCACGTATTTGATGGCCGTAATCATAAACAA
CATTTTGGTAAAATCATATTATATATAATCATATAATATTATATCATATT
TCAGCCCCCTCTCATAATATCCAGTAGTCTCCTGCTCGGGCTCCTGCTAC
CACCATACACGCTTTTTTATAAGAATGGTGTAAATCCATTTCATCATGGA
TATTCTTAACTTTTTTTTGGGAAAATCATCCTAAAATTTTCTTACAGTAT
TCTTAGGTTAGGACCATAGATTTATAAAGCCCGAAGGGCTAGATGTCGTG
CTTTAAGCCATTGCAGGCAAAAACAAGTGAATATCGGAAAGAATATTGTT
GCTATTGTTTTTAAAAACCCGCGAAGCTTCTGATTGGTCAAGCGCTGAAA
TTCTATTGTAATGTCACGTGATTTAGGTAGGATTTCCTACCTAACCACGG
CACACTTTTCAGCAAAAGTACGCCATCTAGCCCTTCGGGCTTTATAAATA
TATGGTTAGGATCCTTATTTGGACTAGATTTAACATTTGGTACATACGTC
TCAAGTATAAAATGGCATTTTTGTGAAAGGAGTGAGCCTTACTTGGGGAT
AATTGACAATTTATAATTGAAAATGCTCTAAAAATGGCATTCTTAGCTTC
AGTAGCCAAATTCCATGATGGTGATATTCTTAGCATTATTCTTAATTTTT
TGGCCATTTTCTTCATGGACATTCTTATAAAGTGTATTCTTATGAAAAAA
AGTGTGTACTCATAATTTATGGTTGGATTGGTCATTACCACAAGAGGGGA
ATTTCCCATAGAATCGTACCACGGAATGAAGAAATTAGTCCACTAAAAGT
TCTTTTATTTATCATTGTATCTCCAGAATGAACCTGTCTTTTCAATGGAG
TTCTCGTCGTCACACTCATCTTTTTGAGGATGGTACACGTTTTTTCTATA
AGAACATCCAAAAATTTTGAAGTCTTCGGATGTTCTTAACTTTTTGATTT
AACATGTTCTTATTATTATTATCTTAGTTTTTTTGTCCATTTTCCTATGA
AACTCGATGTTCTAGAGTCTACAAAGCTTTAAAAAATTCTTAACTCGTTC
TTAATATTTTGGCCATCGAAACCTTATGTTCTTATATAGTTTGTTCTCAT
TAAAAAAACGTGTAATTTGAAAATGGGCTAAAAAAACAGGGGATTGTTAA
GGCAGGGTCTTTACTTTATTCGTTTTCTCATTTTCAGTTTCGCACGAGTC
ACCGTGCATGAACCGTGGTATCGCTTTACCGACGAAACACGATTATCAAT
GTATCTGTAGAAAGGGATTTTACGGAGCTGTTTGTTCTGGTTAGTATAAA
GTTTTTGGGTAATATGGTGGTCGCCCCGCCTTAACCTCGTTCCCTGATAC
ACAAATATGAAGTTAAGGTGGCTTTCCTGACCAGAGAGATTATTATTCTC
AACGTGCTGTTAATCCGATAGTTCAACTGTCCCAAGATGGACTGATTTAT
TTTTATTTTCCTGTTTTTAACAACCCAACCAGGAACCCTTTGGGATGAAA
AAGGAACCCCGTCCAGCAGGGAATTTGTTAAGTCATTTATAATCTGTGTA
ATAAATGGATGTTATATGATGATAGTCACGGGGTAATATTATTTTGTATA
TTAAACTATTAAAATTGGACCCTTGCAATATTTTGCAATGTCTGAATTAA
TCATCCAGCATGCTAGACCAAGGCATTCCTGGTTCCAACCCCGGTCCCAT
TTACAAAAATTGAGCGATTATTCACCGGAGAAAAACGGTTTTTCGATTTA
AATTTGGATAATAAGTACTTTTTTATTTCTAGGAATTGATCATTGTGCGA
GAAGGCCCTGTTTACATGGTGGACATTGTCACGTGACNTTCTAGGAATTG
ATCATTGTGCGAGAAGGCCCTGTTTACACGGTGGGCATTGTCACGTGAAT
GACGTCACGCCTGGTTACACGTGTTCGTGCCCAC

Coding sequence (CDS) from alignment at sc0000260:80814..84147-

>TCONS_00017170 ID=TCONS_00017170|Name=TCONS_00017170|organism=Clytia hemisphaerica|type=CDS|length=6180bp|location=Sequence derived from alignment at sc0000260:80814..84147- (Clytia hemisphaerica)
ACGGTGGGCATTGTCACGTGAATGACGTCACGCCTGGTTACACGTGTTCG
TGCCCAGAATTGATCATTGTGCGAGAAGGCCCTGTTTACTTTCGCACGAG
TCACCGTGCATGAACCGTGGTATCGCTTTACCGACGAAACACGATTATCA
ATGTATCTGTAGAAAGGGATTTTACGGAGCTGTTTGTTCTGCTGTTTTTG
ATGACTGCACTGTAGAATTTGATCTTGATTTCGAAGATTTGATGAAACTC
AACAGAGAATACTCGATAACATATCCTCCAAATACTTTTCAAATACCTTG
TGATCATGAACCATGTGATTGGGATCTTCGACCAATCAAAGCCTTGTATC
ATACTGAAGAACCAATCAGCTTCCAGCATCATCTTAATGAACCAATAAGA
ATGCTGCATTATCATCAACGCAAAGGGAAACACGTGTCACATGATATTCA
CGTATTTGATGGCCGTAATCATAAACAACATTTTGAAAGATGGTGTAACG
AGCTCGAAAGATGGTGTAACGAGTTCGAAAGATAATGTAACGAGCTCCAA
AGAAGATTTAGAAGACCAAACCAAGGTTACTTTAAATAAAGAGGAAAAGA
AGAATTCTGGAAGCGACGAAGTTGCTGATGTCGACAAAGCTGATTTCGAG
GAAGTGGAAAATGGTGAGAATAAGAAATACGGAGAAGTGAAGAATGAAAA
AGAACAAAAGGACGAGAAAAAGAAGAACGAACAAAATGACGAAGAAGCGA
TTTTGAAACTCGGAGATGAAGAAAAAGACAAGGAAATGGAGAAGGAGGTT
GCCCAACAGGAAATTGACAAAATAAAAACAGCCCAAAAAGAAACTGCCCG
AAAAGAAACGGAGCGAAAAGAAAGTGCCGAAAAGAAAATTGATCAACTTG
CAGTCCAACAAGCAGCTGCCCAAATGGAAATTGAAAAAATTAAAACGGCC
CAAAAAGAGGCTGCCCGAATTGAAATTGAGAAAATCAAAGCTGCCCAAAA
AGAAGCAATACAAAATGTAGCTGCCCAAAGAGAAGCTGCCCGAAAAGAAA
TAGAAAAAATAAAATCGGCCCAACATGAAGCAGCCCTAAAAGAAATTGAA
AACATTAAAAAAACCCGAAACAAAGCAGCCCAAAAGGGAATTAACCAAAA
AGAAACTGGTAGCACTGAGTTGACAGATGATATCAAGAAAAATCAACAGG
AACAAAAACTGAAGTGTAAAAACAAGACTATCAACGACGGTGGGCATTGT
CACGTGAATGACGTCACGCCTGGTTACACGTGTTCGTGCCCAGAATTGAT
CATTGTGCGAGAAGGCCCTGTTTACTTTCGCACGAGTCACCGTGCATGAA
CCGTGGTATCGCTTTACCGACGAAACACGATTATCAATGTATCTGTAGAA
AGGGATTTTACGGAGCTGTTTGTTCTGCTGTTTTTGATGACTGCACTGTA
GAATTTGATCTTGATTTCGAAGATTTGATGAAACTCAACAGAGAATACTC
GATAACATATCCTCCAAATACTTTTCAAATACCTTGTGATCATGAACCAT
GTGATTGGGATCTTCGACCAATCAAAGCCTTGTATCATACTGAAGAACCA
ATCAGCTTCCAGCATCATCTTAATGAACCAATAAGAATGCTGCATTATCA
TCAACGCAAAGGGAAACACGTGTCACATGATATTCACGTATTTGATGGCC
GTAATCATAAACAACATTTTGAAAGATGGTGTAACGAGCTCGAAAGATGG
TGTAACGAGTTCGAAAGATAATGTAACGAGCTCCAAAGAAGATTTAGAAG
ACCAAACCAAGGTTACTTTAAATAAAGAGGAAAAGAAGAATTCTGGAAGC
GACGAAGTTGCTGATGTCGACAAAGCTGATTTCGAGGAAGTGGAAAATGG
TGAGAATAAGAAATACGGAGAAGTGAAGAATGAAAAAGAACAAAAGGACG
AGAAAAAGAAGAACGAACAAAATGACGAAGAAGCGATTTTGAAACTCGGA
GATGAAGAAAAAGACAAGGAAATGGAGAAGGAGGTTGCCCAACAGGAAAT
TGACAAAATAAAAACAGCCCAAAAAGAAACTGCCCGAAAAGAAACGGAGC
GAAAAGAAAGTGCCGAAAAGAAAATTGATCAACTTGCAGTCCAACAAGCA
GCTGCCCAAATGGAAATTGAAAAAATTAAAACGGCCCAAAAAGAGGCTGC
CCGAATTGAAATTGAGAAAATCAAAGCTGCCCAAAAAGAAGCAATACAAA
ATGTAGCTGCCCAAAGAGAAGCTGCCCGAAAAGAAATAGAAAAAATAAAA
TCGGCCCAACATGAAGCAGCCCTAAAAGAAATTGAAAACATTAAAAAAAC
CCGAAACAAAGCAGCCCAAAAGGGAATTAACCAAAAAGAAACTGGTAGCA
CTGAGTTGACAGATGATATCAAGAAAAATCAACAGGAACAAAAACTGAAG
TGTAAAAACAAGACTATCAACGACGGTGGGCATTGTCACGTGAATGACGT
CACGCCTGGTTACACGTGTTCGTGCCCAGAATTGATCATTGTGCGAGAAG
GCCCTGTTTACTTTCGCACGAGTCACCGTGCATGAACCGTGGTATCGCTT
TACCGACGAAACACGATTATCAATGTATCTGTAGAAAGGGATTTTACGGA
GCTGTTTGTTCTGCTGTTTTTGATGACTGCACTGTAGAATTTGATCTTGA
TTTCGAAGATTTGATGAAACTCAACAGAGAATACTCGATAACATATCCTC
CAAATACTTTTCAAATACCTTGTGATCATGAACCATGTGATTGGGATCTT
CGACCAATCAAAGCCTTGTATCATACTGAAGAACCAATCAGCTTCCAGCA
TCATCTTAATGAACCAATAAGAATGCTGCATTATCATCAACGCAAAGGGA
AACACGTGTCACATGATATTCACGTATTTGATGGCCGTAATCATAAACAA
CATTTTGAAAGATGGTGTAACGAGCTCGAAAGATGGTGTAACGAGTTCGA
AAGATAATGTAACGAGCTCCAAAGAAGATTTAGAAGACCAAACCAAGGTT
ACTTTAAATAAAGAGGAAAAGAAGAATTCTGGAAGCGACGAAGTTGCTGA
TGTCGACAAAGCTGATTTCGAGGAAGTGGAAAATGGTGAGAATAAGAAAT
ACGGAGAAGTGAAGAATGAAAAAGAACAAAAGGACGAGAAAAAGAAGAAC
GAACAAAATGACGAAGAAGCGATTTTGAAACTCGGAGATGAAGAAAAAGA
CAAGGAAATGGAGAAGGAGGTTGCCCAACAGGAAATTGACAAAATAAAAA
CAGCCCAAAAAGAAACTGCCCGAAAAGAAACGGAGCGAAAAGAAAGTGCC
GAAAAGAAAATTGATCAACTTGCAGTCCAACAAGCAGCTGCCCAAATGGA
AATTGAAAAAATTAAAACGGCCCAAAAAGAGGCTGCCCGAATTGAAATTG
AGAAAATCAAAGCTGCCCAAAAAGAAGCAATACAAAATGTAGCTGCCCAA
AGAGAAGCTGCCCGAAAAGAAATAGAAAAAATAAAATCGGCCCAACATGA
AGCAGCCCTAAAAGAAATTGAAAACATTAAAAAAACCCGAAACAAAGCAG
CCCAAAAGGGAATTAACCAAAAAGAAACTGGTAGCACTGAGTTGACAGAT
GATATCAAGAAAAATCAACAGGAACAAAAACTGAAGTGTAAAAACAAGAC
TATCAACGACGGTGGGCATTGTCACGTGAATGACGTCACGCCTGGTTACA
CGTGTTCGTGCCCAGAATTGATCATTGTGCGAGAAGGCCCTGTTTACTTT
CGCACGAGTCACCGTGCATGAACCGTGGTATCGCTTTACCGACGAAACAC
GATTATCAATGTATCTGTAGAAAGGGATTTTACGGAGCTGTTTGTTCTGC
TGTTTTTGATGACTGCACTGTAGAATTTGATCTTGATTTCGAAGATTTGA
TGAAACTCAACAGAGAATACTCGATAACATATCCTCCAAATACTTTTCAA
ATACCTTGTGATCATGAACCATGTGATTGGGATCTTCGACCAATCAAAGC
CTTGTATCATACTGAAGAACCAATCAGCTTCCAGCATCATCTTAATGAAC
CAATAAGAATGCTGCATTATCATCAACGCAAAGGGAAACACGTGTCACAT
GATATTCACGTATTTGATGGCCGTAATCATAAACAACATTTTGAAAGATG
GTGTAACGAGCTCGAAAGATGGTGTAACGAGTTCGAAAGATAATGTAACG
AGCTCCAAAGAAGATTTAGAAGACCAAACCAAGGTTACTTTAAATAAAGA
GGAAAAGAAGAATTCTGGAAGCGACGAAGTTGCTGATGTCGACAAAGCTG
ATTTCGAGGAAGTGGAAAATGGTGAGAATAAGAAATACGGAGAAGTGAAG
AATGAAAAAGAACAAAAGGACGAGAAAAAGAAGAACGAACAAAATGACGA
AGAAGCGATTTTGAAACTCGGAGATGAAGAAAAAGACAAGGAAATGGAGA
AGGAGGTTGCCCAACAGGAAATTGACAAAATAAAAACAGCCCAAAAAGAA
ACTGCCCGAAAAGAAACGGAGCGAAAAGAAAGTGCCGAAAAGAAAATTGA
TCAACTTGCAGTCCAACAAGCAGCTGCCCAAATGGAAATTGAAAAAATTA
AAACGGCCCAAAAAGAGGCTGCCCGAATTGAAATTGAGAAAATCAAAGCT
GCCCAAAAAGAAGCAATACAAAATGTAGCTGCCCAAAGAGAAGCTGCCCG
AAAAGAAATAGAAAAAATAAAATCGGCCCAACATGAAGCAGCCCTAAAAG
AAATTGAAAACATTAAAAAAACCCGAAACAAAGCAGCCCAAAAGGGAATT
AACCAAAAAGAAACTGGTAGCACTGAGTTGACAGATGATATCAAGAAAAA
TCAACAGGAACAAAAACTGAAGTGTAAAAACAAGACTATCAACGACGGTG
GGCATTGTCACGTGAATGACGTCACGCCTGGTTACACGTGTTCGTGCCCA
GAATTGATCATTGTGCGAGAAGGCCCTGTTTACTTTCGCACGAGTCACCG
TGCATGAACCGTGGTATCGCTTTACCGACGAAACACGATTATCAATGTAT
CTGTAGAAAGGGATTTTACGGAGCTGTTTGTTCTGCTGTTTTTGATGACT
GCACTGTAGAATTTGATCTTGATTTCGAAGATTTGATGAAACTCAACAGA
GAATACTCGATAACATATCCTCCAAATACTTTTCAAATACCTTGTGATCA
TGAACCATGTGATTGGGATCTTCGACCAATCAAAGCCTTGTATCATACTG
AAGAACCAATCAGCTTCCAGCATCATCTTAATGAACCAATAAGAATGCTG
CATTATCATCAACGCAAAGGGAAACACGTGTCACATGATATTCACGTATT
TGATGGCCGTAATCATAAACAACATTTTGAAAGATGGTGTAACGAGCTCG
AAAGATGGTGTAACGAGTTCGAAAGATAATGTAACGAGCTCCAAAGAAGA
TTTAGAAGACCAAACCAAGGTTACTTTAAATAAAGAGGAAAAGAAGAATT
CTGGAAGCGACGAAGTTGCTGATGTCGACAAAGCTGATTTCGAGGAAGTG
GAAAATGGTGAGAATAAGAAATACGGAGAAGTGAAGAATGAAAAAGAACA
AAAGGACGAGAAAAAGAAGAACGAACAAAATGACGAAGAAGCGATTTTGA
AACTCGGAGATGAAGAAAAAGACAAGGAAATGGAGAAGGAGGTTGCCCAA
CAGGAAATTGACAAAATAAAAACAGCCCAAAAAGAAACTGCCCGAAAAGA
AACGGAGCGAAAAGAAAGTGCCGAAAAGAAAATTGATCAACTTGCAGTCC
AACAAGCAGCTGCCCAAATGGAAATTGAAAAAATTAAAACGGCCCAAAAA
GAGGCTGCCCGAATTGAAATTGAGAAAATCAAAGCTGCCCAAAAAGAAGC
AATACAAAATGTAGCTGCCCAAAGAGAAGCTGCCCGAAAAGAAATAGAAA
AAATAAAATCGGCCCAACATGAAGCAGCCCTAAAAGAAATTGAAAACATT
AAAAAAACCCGAAACAAAGCAGCCCAAAAGGGAATTAACCAAAAAGAAAC
TGGTAGCACTGAGTTGACAGATGATATCAAGAAAAATCAACAGGAACAAA
AACTGAAGTGTAAAAACAAGACTATCAACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009605XLOC_009605Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017170-proteinTCONS_00017170-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017170-exon-sc0000260-1575043694:83397..84147TCONS_00017170-exon-sc0000260-1575043694:83397..84147Clytia hemisphaericaexon
TCONS_00017170-exon-sc0000260-1575043694:82741..83034TCONS_00017170-exon-sc0000260-1575043694:82741..83034Clytia hemisphaericaexon
TCONS_00017170-exon-sc0000260-1575043694:81459..81560TCONS_00017170-exon-sc0000260-1575043694:81459..81560Clytia hemisphaericaexon
TCONS_00017170-exon-sc0000260-1575043694:80933..80965TCONS_00017170-exon-sc0000260-1575043694:80933..80965Clytia hemisphaericaexon
TCONS_00017170-exon-sc0000260-1575043694:80814..80870TCONS_00017170-exon-sc0000260-1575043694:80814..80870Clytia hemisphaericaexon
TCONS_00017170-exon-sc0000260-1510915933:83397..84147TCONS_00017170-exon-sc0000260-1510915933:83397..84147Clytia hemisphaericaexon
TCONS_00017170-exon-sc0000260-1510915933:82741..83034TCONS_00017170-exon-sc0000260-1510915933:82741..83034Clytia hemisphaericaexon
TCONS_00017170-exon-sc0000260-1510915933:81459..81560TCONS_00017170-exon-sc0000260-1510915933:81459..81560Clytia hemisphaericaexon
TCONS_00017170-exon-sc0000260-1510915933:80933..80965TCONS_00017170-exon-sc0000260-1510915933:80933..80965Clytia hemisphaericaexon
TCONS_00017170-exon-sc0000260-1510915933:80814..80870TCONS_00017170-exon-sc0000260-1510915933:80814..80870Clytia hemisphaericaexon
TCONS_00017170-exon-sc0000260-1491911889:83397..84147TCONS_00017170-exon-sc0000260-1491911889:83397..84147Clytia hemisphaericaexon
TCONS_00017170-exon-sc0000260-1491911889:82741..83034TCONS_00017170-exon-sc0000260-1491911889:82741..83034Clytia hemisphaericaexon
TCONS_00017170-exon-sc0000260-1491911889:81459..81560TCONS_00017170-exon-sc0000260-1491911889:81459..81560Clytia hemisphaericaexon
TCONS_00017170-exon-sc0000260-1491911889:80933..80965TCONS_00017170-exon-sc0000260-1491911889:80933..80965Clytia hemisphaericaexon
TCONS_00017170-exon-sc0000260-1491911889:80814..80870TCONS_00017170-exon-sc0000260-1491911889:80814..80870Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000260supercontigsc0000260:80814..84147 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0690228	0.016827	0.0781512	0.0382294	0	0.0183885	1.75261	1.84847	0.0872463	0.342217	0.506988	0.183875	0.18362	0.119182	0.215564	0.241848	0.414522	0.677138	0.330178	0.230338	0.250257	0.43944	0.494626	0.683525	3.48302	2.59594	0.118305	0.0252517	0.134067	0.11708
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013032EGF-like_CS
IPR000742EGF-like_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017170 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top