TCONS_00017094 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017094
Unique NameTCONS_00017094
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3388

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017094 ID=TCONS_00017094|Name=TCONS_00017094|organism=Clytia hemisphaerica|type=transcript|length=3388bp
ATGTCTTGCACCTTATACGTGATTTAGCGGAAGAAGGTGCTTGTTGATGT
AACACTGTCAACAAAGAGGACGATTATAAGATTCAAGATTCAAGATTCAA
GAAATCTTggcttttggccaaaatttggcaCAAAGTTTTATCTCTAAAAT
CCCACATTTTCTACTATTCAGATACCATTACAGGtaaaaaaagaagaaaa
aatatggATAGTAGAGAATTGAGAATTGTTAATGATGGAAGCGTACCTGG
TGCTGCTCCTGAATATGCACAAGGAAATCCAAATGCACCATTGCCGCTTG
CAAATAAATCATTGCTTCTGCAAGGTGAAATCGACCACATGAAGATGTTA
TCTTCTCAATTCAAATCTTTGTTACACACTGAAGACTTTTCTGATGTCAC
ATTTTTGGTAGAAGGACGCAAATTTTATTGCCACAAAGTCATCTTATCAG
CTCGATGTGAATATTTTCGTGCTCTACTTTTTGGTGGCATGAAAGAATCA
AATACGAATGAGGGAATTCCATTGCTAGAGACTTCAGCAGCATCTTTTGC
GGTGCttcttgaatatctttacacTGGGATTATTTGCTTAAAAgacttaa
aagaagaaaatgtgaTTGATTTACTTGGGCTTGCTAATAAATATGGTCTC
TTAGATCTTCAAAATTCGATTGGTAGCTATCTTGAATCAAGAATTAACAT
TAAGAATGTCTCACTAGTTTATGATGTATCTTGTTTATACTCATTGCATG
ATTTACGTGATAACTGTCTAAAATTCATGGACCATAACGCAGTGGATATC
CTTGAAACAGAAGGATTCACAAATTTATCAGAGCTGGCAGTTACAACTAT
TATATCTAGAGATTCATTTTGTGCACCTGaagtcaaaatttttaaagctg
tCGCCAAATGGATTGGAGTAAACATAGAGGAAGGTGCGGGCTACAAACAT
ATCTTAAAGATCATACGGTTACCATTGATCAGTCTCCACGACTTATTTCA
CGGTGTTCGAGAATCTAGTCTTTACCCATCAGATGTCATCCTAGATGCTA
TTCAAATGAAAACAGAATACAAGGTCAATGATATGCCTTTCAGAGGTCAC
CTAGAGGAAGAAACAAACTTAGCTCAAGAATCAAATGGTGCTGAGGTGCT
GACTGGAGAATTTAAGGAAACACTATTCAATGGTGAATTCAGTCTTTATG
ATCTTGAACGTGGATTCACAAGACACTTAATTGGTGATGAAGAAAAAGAT
GGCATTGTTATAGCCCTTGGTCGACCAAGTATCATTAACACTATTAGAAT
GCTATTATGGGACAAAGACCAGCGTTCTTATTCTTATGTTATTGAATGTT
CGCTTGATAATCAAAATTGGACGCAGTTGGTAGATTATTCACACTATCCT
TGTCGATCTTGGCAGAAAATACAATTCCACCCTAAAGTTGTTCGaTATAT
TCGTGTACTTGGAAAGAGCAATACTGTCAATAGATATTTCCATTTAGTCA
ATTTTCAATGCTTATTTTCCAACACTATATGTGAAGTTCAGAATGGAATT
ATTGTTCCCACAAACAATGTGTCTTACATTCTTGCAAGTGCTTTGTTGAT
TGAAGGTGTCAGTCGTAACAGAAATGCATTGATTGATGGTAACACTGAAA
ATTATGATTGGGAATCTGGATACACTTGTCATCAAATTGGATCTGGTTGT
ATTACTATACAGCTTGCACAACCATATTTCATTGGTTCAATGAGAATGTT
GCTTTGGGATTGTGATAATAGAGAGTACAGTTATTACATTGAAGTGTCAA
CAAACCAACGAGATTGGGTTATGGTAGTCGATAAACGAAAAGAAAACTGC
AAACGGTGGCAGAATATGACATTTGAGCCAAGAATTGTAtcattcatcaa
aattgttGGTACAAGGAACACCGCGAATGagGTGTTCCATGTAGTTCATT
TCGAATGCCCGTCATCAGAACCCATAGAAAGAGTAGTAACACAAGAAGAA
ATACAACCACAACCACCACAACCCCTTCTTCCTGTGGTAGCAGTTTCATC
CTCGCCTTCACCTCAACTTCAATCAACAAGCAGAAGTTCTTCATCTGCAA
CTGAAGTCGATTCTGATGGTGGCGTTGGTGGTGCTCGAAGCTCCTAAAGT
GATACACTGTCTGCAACCAGATTCGCCATTGGATTTCTTAAATCTTAATG
CTTGGAGCTCCTAAATCATGAAGTGCCTTGGATTTGAATGGTCAAAATAC
CTGGAAAAAAGGatgtttttgaccaaaaatgctggATTTTTCATCTGAAA
TAAGCGTGGCCACCCTGTTGATGAAGTGCCTGAATggattttttggtttt
tgtgaATTGAATCTTTAAGCAAGATTTACATTCGAAACTGCTCACCCAAG
TGACCATGACCTTGTACTTGAAACACAGAATGAAATTTTGTTAGTTATTC
GAGGCTACCCGCTCCCATTAAGGATTGCTTTAGCGCTCGATCCTTCTACA
ATTGAAGTGCCTTTGAATGAATTTCTGAAGTTATTGGACATCTTCTCGAA
ATTCGGGAAGAGCTGTCTTCAAGTGCCCGAATATGACAAGTGTTTTCAAt
ggaattgttttgttttcatgaaATGGATTGCTTAAGATTTCATAGAGTAA
ATTTTGAAGTAGAAAGTTACTCCTGGTACTGGCTTGGGAGTCATTGCTGA
TACTACATACTGGAAGAAGTCATGCCCTCATCGAGTTCCTGTATTCGGGC
CTGTGAAAAATCTATTACTTAAAAGAcctaataaaaataattctgcTTCA
GAATATCTACCCACTTAAAGTAAGAAAAATCAAGAATAGTATTTCTAATT
TACCTGTATGTTAATTTCTGGAAgagacaaaaataaaattcattgttCAC
GAAAAGTTGAATTAGTATTCAAAATTGCGTTAAAAATTACAgtttatcaa
aattaaattttgttcaCTTTGTTTAGTTAATTTTATGATGGAATTATAAC
TGTTGGACTTTATTCGGTCTATCGCTGGGACTATCAAGAGAATTATCACC
CAATTGTCTTTTTAAGGAATGTGATCTTTGAACATTAAGGTAGAATGATT
TTTAAAACTCCATTATTATGGATTGGACTACCATGGCGGACGCCTTGAAT
TTATTTACATGTAAAATTTAGTATCTATTTGGAAATGTTTTAGGGAAATT
TCAGTTTTTCAGCTTTCCTTTTTTGTTTCGTTCCAGTACACTGTATTATA
TAAAGAATTGTATATATAGTCGAAAATCTTTGGTTGtgaatataaagttt
tttttaagatttcattATTTTGTTACTTGATAAACTatgattaaattttt
agttaatTTCtgtaataccttaagggaagaaatttttg
Run BLAST on NCBI

transcript from alignment at sc0000259:116563..137948+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017094 ID=TCONS_00017094|Name=TCONS_00017094|organism=Clytia hemisphaerica|type=transcript|length=21386bp|location=Sequence derived from alignment at sc0000259:116563..137948+ (Clytia hemisphaerica)
ATGTCTTGCACCTTATACGTGATTTAGCGGAAGAAGGTGCTTGTTGATGT
AACACTGTCAACAAAGAGGACGATTATAAGATTCAAGATTCAAGATTCAA
GAAATCTTggcttttggccaaaatttggcaCAAAGTTTTATCTCTAAAAT
CCCACATTTTCTACTATTCAGATACCATTACAGGGTaagtttttttgtct
tttttattaaGGTATAAAATCAACAGCCTTCATCCAAAAAATCTTGGGAA
ATGTACAAACTTAAGGAGGTATATACTTATAATtaaattgaataattttt
aaatttttcataaaatctgCTGCCTTGCCTTGCACTTAGCCTTGTGACTA
AAATTAGCTGGTAGATGATTGGTCGCTTGTGATTTGACTGTTTTTAATCC
ATCATCAGTTAGGTATCGTcaacaaattttcaaacaattagGCAACTGAA
TGGTCTGTAAAattatgaaatgtttttaaaaagtctGTTCATCAAATTTC
ACTTTTACTTACACATGACAATAATGGGCTGTTCGCCCGTGTAAGAAGCA
CAACTGACGTCACGTACAGTAGGCCACGTGATCATGGATCTCGCATCTCG
GATCTCGCGGATCTCGGATCTTCTTGGATCTCAGATCTTGGATCTCAGAT
CTCAGATCTTGGATCTCGCGGATCTCGGATCTTGGATCTCGGATCTCAGA
TCTTGGATCTCAGATCTTGGATCTCGCGGATCTTGGATCTTGGATCTCGG
ATCTCGGATCTTGGATCTCGGATCTTGGATCTCGGATCTTGGATCTCGGA
TCTTGGATCTTGGATCTTGGATCTCGGATCTTGGATCTCGGATTTTGCGG
ATCTCGGATCTTGGATCTTGGATCTTGGATCTCGGATCTCGGATCTTCGA
TCTCGGATCTTGCGGATCTCGGATCTCGGATCTCGGATCTCGGATCTTGG
ATCATTGGATCTAAGATCGTTAGATCATTAGATCATTggggatcgttgga
tcattggatcattggatcattggatcattggatcattggatcattggatc
gttggatcgttggatcattggatcattggatctaAGATCGTTAGATCATT
AGATCATTggggatcgttggatcattggatcattggatcattggatcgtt
ggatcattggatcgttggatcgttggatcgttggatcattggatcaatgg
atcgttggatcacattggatcgttggatcgttggatcattggatcgtcGG
ATCGTTGGATTGTTGGATCGTCGGATCATTGCATCATTGGATtacattgg
atcgttggatcattggatcgttggatctttggatcaatggatcgttggat
cgttggatcgttggatcactGGATcacattggatcgttggatcacattgg
atcgttggatcacattggatcgttggatcacattggatcgttggatcaca
ttggatcgttggatcgttggatcattggatcgttggattaTATTGGATTG
TTGGATCatattggatcgttggatcattggatcattagatcgttggatca
ttggatcattggatctctggatcgttggatcgttggatcattggatcatt
ggatctctggatcattggatcgttggatcattgaatcgttggatcgctgA
ATCATTTGATCATTGGATGTTTTGATCGCTGGATCATTGGATCACATTGG
ATCAttggagtctgctaaattgcgtgggttgcgtgggtgcgtggatGCGT
Tggtcaatattttttgcgtgggtcaaattttttgcgtgggtcatattttt
tgcgttgGTTATTATTTTTTGCATGGGTCATATATTTTgcatgggtcatt
attttttgcgtgagtCATATTCTTTGTGTgagtcattattttttgcgtgg
gtcaaagttTTTTCGTGGATCACTATTTTTTCGGTGATTTTTTAGCTCAc
tcgatttttttaccaaattaaaactttcgaTTTAGCTAActcgttttttt
tgtcaaatgaaaattagttatcttatacaaaaatgtgttgtgtatctacg
aaaactaaacaaaagcacaCTGTTTTTATCGGTTTTTATGTAATGCGTTG
TGGTTTATTTTGCATAGCTGCACATatttaccctgagtatcagaggttaa
gttttcaaagaatatattaacctctgaagacgaATAATAGAAATCTTATC
Gctcatgtgtcaatctaatcactgtagaaaaaatcaaagatgaagagcaa
atattaccttattgtaatgtctagcagattttatcagtatgcagtttact
atttacgaaatccccagaaacctccaagtatAATTGAAGtaagtttcttt
cgaaagaaatcttttacatgatccccaaatttataacagtaattactaaa
ctattgattatggaaatgtcacttttaattgaatcgaaataatagacaga
ctttatgttgtGATTTTCTATCGCTGACTCTTGTTAAAAAACATTGTTGA
TATTTCTAAGTTGTGTTTTTAACGACGGGAATaaagatatcaactttgaa
cttcatccaagatcttggatggtcgttaTGGTTACTTTTgccttcgttga
ttgcgcgctgaatagaatctggattggtcggcacagcgtcgatatatgat
ttcgacctgtgcttttcacggtatgtAGTATTGTATTTACTATAATATTA
TATATAGAATCAACGCACACCCGTCTCATTTTTGAAGACACACTTCAGGa
tcacacttttgaattttagcgTGTTATATTTCAGGATTCTAGTGTCATGG
AAATAAACACTAtaactttaagcaaaaaaatatgacaTGGCCGAGATATG
AGATATGGCCGTTTATTGCTTCTTTCCTTTCTATTGAATTTTTTCCTCCC
TTTTTCTcttgctttaaaaaaaaagtacaGCGTCTTTATTTTGTCCAATT
TTCTAAATTGACCTTTAATGTacttaaatcaaagaaattacaagtgGGTG
GATGAAATAATTGTCAACAATTAAATTGTTTGGTAATCGGTGGCCTAATG
AATAtaacttttgtagaaaaatatTCAGATTTTGTCGCCATTTGCTTTGT
TCTTAACAACACTCAAAGGCACCCAAAAGATTAAAGCGTGCTTTAAGAAG
CTATGTTCAGTCAGcggaattaaaaaatataaagccaCTTGATTGTGTAC
ATTTTTTGGCCATTCTATCTCAAGGTATATACAAAACGTAACTACAGtat
taattttgaaagaaatctcccAAAAGGGAAAAGTCCACTAATAAAATAAC
TCTCCCCTGTTGGAGACATTCTTTCCGACCTCGTTTATTGGAACAAATTC
ACCATGTTCAGTACGGAACTGTACAGCtgtgcaaaataaacaaaataatt
caaaacGTGTTATGTAAAGTAAaacgaattacagagagaattttgacccg
cgcaaaaattttgacccacgcaaaaaatatgaccaacgcaaaaaatatga
cccacgcaaaataaatttgacccacgcaaaaaatattttgacccacacac
ccacgcaaaaaaataacccacgcaaaaatattgacccattcacccacgca
atttagcagactctatacgtttttttttgttgtttttttatacgTTCTTA
CGTTCTGCAATTTTAGCCTAGTCGAAGTTTAAAgtgaccaaaaaaaaaat
caatttgccAGGACAGGTAAAGACAAAAATTGGTGATATTTGTCTCTTTT
ATGCTGTATTTGTTGTGTTTTAAACATATAATTCATAATGCATAGATATA
ATGGCATTGTGAACTGCAATCAAAGTGTAATCAAAGTAATCGAAGATCAA
TCGAGTCTAatcagtacagtcaagtatcaatatttgaggtattacgaaaa
tgGCTACTTTTTaccgtaatcgctttcgtttttaacacaaggtcttagca
acaggtaCCCCCTNGCTACTTTTTGccgctttcgtttttaatataaggtc
ttagcaacgggtaccccgggcatagttacggggcattgagaaaaaaacct
gacatagaatttcaaaaagattcacgctatcatattctacattacaaaat
acacctgttctatgttgggtttttgtttttaggcttaattatcgtcatgC
AAAGTTAATAAAACCCTGGAattctttaggttttgataagcaaaatactt
acatactattgtttacttttcaggtattcatccaatcagaattcacactc
agaaactttcaaccaatcaaaattcaaccgtgacgcgggaaatgatccaa
tcagaatcccgaagctaaagacttacagccaatcagaatttgttagcaag
cggtattcatccaattggaatcgcataacacgaaagtgaaagtaaaggcg
gaaatatattcttttttcgacgtgatttgcatatattattagaacagaaa
gaaacgccaatttgtcaaagatttgtttaaaaccaccttattttttgttg
agtatcgcctaaatttatcgGAAAAATAcgcttttcaacattaatcttaa
aatctcttttattgttaagtatccccAGGCGAGGGGTaaattcaaatagt
atttatttgacatattttgtgttttgtttggaaatatttcgcggatgagg
cccttccaaatttccattgggacttaatttcgcggattttcgcagATGAC
accaaaatccgcgaaatccgagaaatttaatccccgcaaaagtttatccc
attaaaggaCATACAGAACAAGTATTTTGAAATGTCTTTATGGACAAATT
GAATCGTTTAATCGCAATCCAACGATTCAATGACCCAATGATCCAGAGAT
CCAACAATCCAATATGATACAACGATCTAATGATCCAACGATCTAATGAT
CCAACGATCTAATGATCCAACGATCTAATGATCCAACGATCTAATGATCC
AATGATTCAAcaatccaacgatccaatgattCAAcaatccaacgatccaa
tgatccccaatgatccaatgatccaaccaATGATCAAaccaatgatccaa
cgatccaatgatccaatgatccccaatgatccattgatccaacgatccaa
tgatccaatgatccaatgatccaatgatccaatgatccaacgatccaatg
atccCCAGTGATCcattgatccaacgatccaatatgatccaatgatccat
tgatccaatgatccaatgtgatccaatgatccaatgtgatccaatgatcc
aacgatccaatgatccccaatgatccattgatccaacgatccaatgatcc
aatgtGATCCAATGATTCAACGATGCAttatgatccaacgatccaacgat
ccaacgattcaataatccaatgatccaacgatccaatgatccaatgatcc
aatgatccaatgatccaatgtGATCAAACGATCCAATGATCCCCAATGAT
Ccattgatccaacgatccaatgatccaatgatccaatgatccaacgatcc
attgatccaatgatccaatgatccaacgatccattgACCCAaagatccaa
tgatccaatgtgatctaatgatccaacgatccattgatccaatgtgatcc
aatgatccaacgatccattgatccaatgtgatccaatgatccaacgatcc
attgATCCAATGTGATCCAATGATTCAACGATGCATTGATCCAATGTGAT
CCGATGATctaatgatccaacgatccaacgatccaatgatccTCAATGAT
CTAATGATCtaatgatccaatgatccaacgatccaacgatccaacgatcc
aatgatccaatgatctaatgatccaatgatccaacgatccccAATGATCT
AATGATCTAATGATCTTAGATCCAATGATCCAAGATCCGAGATCCGCAAG
ATCCGAGATCCAAGATCCGAGATCTAAGATCCGAGATCCAAGATCCGAGA
TCCAAGATCCGAGATCCAAGATCCGAGATCCAAGATCCGAGATCCAAGAT
CCGAGATCCGCAAAATCCGAGATCCAAGATCCGCGAGATCCGAGATCCAA
GATCCGAGATCCGCGAGATCCAAGATCTGAGATCCGCGAACCGAGATCCG
AGATCCAAGATCCGCGAGATCCAAGATCACGTGACCTAATGTACGTGACG
TCAGTTGTGCTTCTTACACGGGCGATCAGCCCAATAATGGTGtcaatcga
aataaaaaatgcacagcaaaacttttaaagagatttatgaaaaaataacc
tgtcactttttaataaaaataacattttcaaaaactatgagaaattgcct
aaaatttgagccattaaatgaaaaaacttgagccaagccaaccttgaaaa
ctaatatTTGAAAGTCaaattcccaagaaaaagatctacgggtgATACGG
ATcccacctagatccgcacaCTGCTGGATAGGCTATCtatcagtcgggtg
tttaagataaaaactgcaattattgctcttttcggaaattattgccgaaa
acggcaatttttttaacgatgaaatgctgaatcagcagaaaaataaagaa
gtaaataaatgaaaattgccgttttcggcaattattgctgtTTTTcgcaa
ataaaagttgattttattatcgaacacgtggtatttgacaccctcgcgat
aagtaggcccactgtgcctcgtttagttttgttNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNgtttcggcatcgatgcaggatcttttaacttattatttt
agaacttttcatgttattgagcaacgaaaaattgaaaaaatcacttttaa
aaatccgaaaaagcttTTTCTCGGTgcaattttacttttttcaaacacct
ctgacatctttgcccttaaaaggacaacacattttgctgattcagcattt
catcgttaaaaaaattgccgttttcggcaataatttctgaaaagagcaat
aattgcagtttttatcttaaacacccgactgtctatgattaagttcgaca
aagttcaaTTGGATTTTTGTGAATTCCAGACGACATTTCTGACAGACAGA
CGTAAGTAGCCCACCCATGCCAAAGAAGTGACCCTCCCATCTGGAAGAGG
GGAGGTTAAAGTACTCAAAATTAATTCTATACATCCTTACcatcaaattc
aaaaatttttaacatgAACAGACAACTGACACCACGTGCATATTACACCG
CCATATGTGCAAAGTCGAAGAAAACCATGTAAACAAATCAGAATTTAAAA
CACTGACCTgtaacttttaaaagattttttaatactttctctttatcatt
tttaataaaactaAATTGTAACGTTtatattaaaataaatatttccaaTT
AGTTATTTTCTTCAGATAAATTAAATACTCAATATTTAATtactcaaact
gaaaatttacagTCAGTAAAATACCGTTTTAGTATGAAACTCTAGCGGGA
CCGCATCGGCGGGGCCGGTGTGTTAGGTCANNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCATATTTACACAGAG
AAACTATTATCTGCAGCTAAAAATGTCCTCTATTCATTGTGTGTGAAAGC
CAACAGTTTCAAGGTTGCTTCAAGTCAAAATCATAGGGCAAAAAATGTCC
TCCACTGATGTCTTtctaaaatcttaatttttggtCTAACCAAATAACAA
TCACATTGGACTTGTCTGGCCAATTTAAAATGCATTCAGACATGTCGGAC
CCAAATTGACTTACGTCCGACATCATGTCCCACAATATTAAAATATTGTC
ATTTCAGGCCCTGCAAATTCTTTTTATGTTTCTCTTACTAgggtgagtta
gggcgtgtctagatttttaaTCCCGAATCGGCGATCAATAGAACCCATTC
TCATAGACTCACTCATTGATTTTTAGTTGATCTATACTTTAAATTTTCAG
GATCCGGTTGTGACCTAATTTAACaataacctaaaaattaattatgaaGG
AAAAtgtgaattatgacgtcattaaattATGATACATGGTTTATTAAAAC
TCCCACAACTAAAGTTGCTAAACCCAAACTTGTTGATACATAGTTTTTTT
AAACTCTCATACCTAAAGTTGTTAAACCCAAACTTGTTATTTTGTTCATT
GACCTGCAACTACAAGATTagattgtatatatttttcagtaaaaaaagaa
gaaaaaatatggATAGTAGAGAATTGAGAATTGTTAATGATGGAAGCGTA
CCTGGTGCTGCTCCTGAATATGCACAAGGAAATCCAAATGCACCATTGCC
GCTTGCAAATAAATCATTGCTTCTGCAAGGTGAAATCGACCACATGAAGA
TGTTATCTTCTCAATTCAAATCTTTGTTACACACTGAAGACTTTTCTGAT
GTCACATTTTTGGTAGAAGGACGCAAATTTTATTGCCACAAAGTCATCTT
ATCAGCTCGATGTGAATATTTTCGTGCTCTACTTTTTGGTGGCATGAAAG
AATCAAATACGAATGAGGGAATTCCATTGCTAGAGACTTCAGCAGCATCT
TTTGCGGTGCttcttgaatatctttacacTGGGATTATTTGCTTAAAAga
cttaaaagaagaaaatgtgaTTGATTTACTTGGGCTTGCTAATAAATATG
GTCTCTTAGATCTTCAAAATTCGATTGGTAGCTATCTTGAATCAAGAATT
AACATTAAGAATGTCTCACTAGTTTATGATGTATCTTGTTTATACTCATT
GCATGATTTACGTGATAACTGTCTAAAATTCATGGACCATAACGCAGTGG
ATATCCTTGAAACAGAAGGATTCACAAATTTATCAGAGCTGGCAGTTACA
ACTATTATATCTAGAGATTCATTTTGTGCACCTGaagtcaaaatttttaa
agctgtCGCCAAATGGATTGGAGTAAACATAGAGGAAGGTGCGGGCTACA
AACATATCTTAAAGATCATACGGTTACCATTGATCAGTCTCCACGACTTA
TTTCACGGTGTTCGAGAATCTAGTCTTTACCCATCAGATGTCATCCTAGA
TGCTATTCAAATGAAAACAGAATACAAGGTCAATGATATGCCTTTCAGAG
GTCACCTAGGTAAGGGATCTTAGATTGAATTTTAGCACTGCTGTgtagtt
ttttttcttgttgGTCTTTGTTTTCAAACCAATATACAATGCAATAAACA
ATACATTGCTTTATTTTCTATCATCATCAAAATATTCAGGTCTTTTGAAA
TGCAACTCTCTAACTTCAATTTTTCTGGCATTTTTTGTTACAAAATGCAT
CAATCAAATAGGTTTTGACATTGTGGACAGGTTaagaaatttgtactttt
gcCCCAGACTCAATTTTAATATCAATAGGATAATATTTTTTACTAACAGA
GGAAGAAACAAACTTAGCTCAAGAATCAAATGGTGCTGAGGTGCTGACTG
GAGAATTTAAGGAAACACTATTCAATGGTGAATTCAGTCTTTATGATCTT
GAACGTGGATTCACAAGACACTTAATTGGTGATGAAGAAAAAGATGGCAT
TGTTATAGCCCTTGGTCGACCAAGTATCATTAACACTATTAGAATGCTAT
TATGGGACAAAGACCAGCGTTCTTATTCTTATGTTATTGAATGTTCGCTT
GATAATCAAAATTGGACGCAGTTGGTAGATTATTCACACTATCCTTGTCG
ATCTTGGCAGAAAATACAATTCCACCCTAAAGTTGTTCGGTTAGTTTCTC
CATCTTGTAATTACTGACAATCTTTAATTCCATGAAGTAAATTCATTGTC
TTGAGTATCATGGTGAAACTTTTCGCAATGGAGATAAAAAATACTAATCA
AGATGGTTTTGGAATCCAATTCCACTCCCATAAATTGCGGATAAATTATA
GGAAAGAAATTGCCCAGTAGGGTTGAAATTTAGAGGTATCTTTTTACCAA
GTAAAATTCTGCTAATTTCTCCACGGTACAGGGGCTCTACTGGATCTGTT
ATACCGGTGAAATTTGCAAGCCTATGCCTTAGCTTTGGTAAGTTTCGGTC
TGTCTATCTTTCTTTCTATCATTTAGAATACTTTTGATTTTGTGCTAtcg
tttttgtttattttaatttcagaTATATTCGTGTACTTGGAAAGAGCAAT
ACTGTCAATAGATATTTCCATTTAGTCAATTTTCAATGCTTATTTTCCAA
CACTATATGTGAAGTTCAGAATGGAATTATTGGTAAGCTGTCATAATGAT
GAAAATACTGTAaaagttttttgcttgaaatcttTAAGTCAAACAATATA
AGAAAGGAGCGCATCGTTTTGAATGCTAAGTCCAAAAAttacaacaaaag
aaaaatattctgGAATTACCATCTGcaacagaataaagtaaaacagggcc
aaatttggaggttcttggatcactcgttgataaaaaatggtcaaaaaacg
gtcaaacggtcagatttttgtctttttttgacTTATTGGCTTTTAatatc
tcgctggaaagactcacttttgaattaaaTGACTGTTAACGAATTTACAA
GGACTATTTGTTCTCAGTGTACTATATTGACGTTAGGTTATCGCTTACAA
TGTAATGGGTGTCTTACATTGTCTTACTCCTACACTTGTGTTTTTTATAC
CTTCGTCGAGAAGAATTCTACTTGTATTTTCTTTACCAGTTCCCTCAAAA
GCGCTAAGGGTTGATAGTTGTATTCCTGAAAGTATTATAATAGAGAATTT
AAATGCAGATAAAAAACAACCCCTTTCTTCTTTTTAGTTCCCACAAACAA
TGTGTCTTACATTCTTGCAAGTGCTTTGTTGATTGAAGGTGTCAGTCGTA
ACAGAAATGCATTGATTGATGGTAACACTGAAAATTATGATTGGGAATCT
GGATACACTTGTCATCAAATTGGATCTGGTTGTATTACTATACAGCTTGC
ACAACCATATTTCATTGGTTCAATGAGGTAtttagtattcatgatatgca
ccatttcaatgtcttccacggacccaacagctgattggttgtaagtgacg
tatcgactgattttacgtcacttggaaccaatcagctattgggtccgtga
tgtaatgtcagaagacattgcaatggtgcatatcataaataataataaat
atacACCCCTGAAATCTCTTTCAAAATAGTCGATTAGTTGCAAATGAACG
ACTGAAAACAGACAATTGACCAGTCAATGCATATCATGGATACACATTTT
TATCACCACAGTGCTGTTAGGATCTGGAATTGATTTTGCTAAGGTGTACA
TCAACTGCTTGATGTTCATTGACATGCTCATGGATATAGATATATTTGCC
TCCAGGATTCTTCCTGGCAAATTGAAATAGAATCCCTTTGTGACATTAGC
TTTGATAGGTGTATTGTTCAATCGTATTTATTCTCATAATACTTAGATTT
ATTTGGCTATTGTAGTCAGGCGTAGACTCTAACAGCAATTTTATTATGAA
TCCCTTTTAAAATCAATTATGGTTGTTTTAACGAATTTAAATACCATCAC
TTTGTGATTTCAAAGCGCACCCCACGGGGGGACTGGGAGAGCATGGGTCA
CCATGGCCCTCCTAGGTACAGACATACGGGTACAGGACTGAAAGAATTGA
ACGATCTTAATTATGACTTAATGGGATATTTATTGTTTCCAAATGGTAAA
AACACTTTTCTCATTATTTTCAGAATGTTGCTTTGGGATTGTGATAATAG
AGAGTACAGTTATTACATTGAAGTGTCAACAAACCAACGAGATTGGGTTA
TGGTAGTCGATAAACGAAAAGAAAACTGCAAGTAAGAGAATTAATATTGA
AAACTAAAATTCCATTATCTGTCAAACCAGGTTTGGAAAATCTTCTTATT
TCTTAATATAGAGACTTTTCATCTAACGTTTTTCcagatcatctaaaaag
aacgaaaaataaCTATTAGAAAGCGACAGAAAGAACGACAAAGCCTAACC
CTAGCTATCAAtgaacgacatatttcgccgttCCAAACCCTGACCTTGGT
CAGTGACTACCACCCCTACACATTAATCtactttttgtacttttacgcCA
TTTAACAACTAGTGGTTAAAGAACGATAAATTGCGCATGCGTATAACTCT
CTATTTGAGTTAGCTGGAAATATTAGATGAACTAACTCTATAGGAAAAAC
TGATATCAGTTGGCCAAGATCACTGTCTCTGAAAGGAGTGTATTATGAGA
AACATTTTAAAGAATAAAAGCTTTAAGCTCAAGAATTAGGGAATCCACAA
GGGTCTTATAATTTTCTTCGAAATAGACGGAGTTGACTGTGATATCATAT
AAATACACCATTCAGACAGTTGatgcttatttatatttttcatcaGACAT
TAAGGTTCTTTCAAGTTTCAGAGACGTTGGTTTATTAGACTATCAGTTAG
ATTATAAACAGTTATATATGTTCCAATTCAGTGGTATTACACATTCTTCC
TCTACCTTCTAGACGGTGGCAGAATATGACATTTGAGCCAAGAATTGTAt
cattcatcaaaattgttGGTACAAGGAACACCGCGAATGaggtttaaatt
ttctttaaaattcatgatatcacactgcaatgacttcatgaaattatgca
acttttctgtgtttttttttacccaatacgtcacttttttctattgttta
agtgacgtattgggtggaaaatttaaagagttctcagaagactctccagt
agtgcatatcatgaatagggaAAAAACCCAGTCAGCTTTTTAAAGTGTTA
ACAAAATATGTCCACTTTTGCCTTCTGAAACAGTTACAGTAAATCTTACT
AAATCGAACTCGAGCgaaaaatcttatttgttcgaataaccTGATAATTA
tagagaatattttaagaatgtTTCTCCCTGACGGGAACTAAGAATAAGTT
CAAATAACAAAAAGATTCAattaatagaagttcgaataattGAGAGCCGA
CTATATAttagacaggagaaccgtcgtgtgtttttttataatttgatgta
cacaagacgggttcgagctgtgagtccaatattggactcacattttttac
attaggaaattcgaatttagcgctgtcctcactttatactaaaataaaaa
ccaaatttcgaaagttgcgctttctctaagaaagtgtgaccagtaaaaga
ataacaaaatttgattggctatgttttcaaccgttattaggatctgagaa
attcaaactctcagcccataccatgctatacatttccccatcagtttatc
aaagaagaaatcatagcatggattcccaggctaactaTATATTTGATTTT
TATCACTCTTATAAAACATGTTTTGAGAATGTCTCTTGATGCTCCCTTCA
TAATACTGTAATACCGTTTATATTGGGTATAAGTATTCATCTTTCTTAAA
TATTACTTACCAGAATATCAACAAATTggtcgaaatttgaaaaatccata
tctatgttttctttgaaaaatctttgtaGGTGTTCCATGTAGTTCATTTC
GAATGCCCGTCATCAGAACCCATAGAAAGAGTAGTAACACAAGAAGAAAT
ACAACCACAACCACCACAACCCCTTCTTCCTGTGGTAGCAGTTTCATCCT
CGCCTTCACCTCAACTTCAATCAACAAGCAGAAGTTCTTCATCTGCAACT
GAAGTCGATTCTGATGGTGGCGTTGGTGGTGCTCGAAGCTCCTAAAGTGA
TACACTGTCTGCAACCAGATTCGCCATTGGATTTCTTAAATCTTAATGCT
TGGAGCTCCTAAATCATGAAGTGCCTTGGATTTGAATGGTCAAAATACCT
GGAAAAAAGGatgtttttgaccaaaaatgctggATTTTTCATCTGAAATA
AGCGTGGCCACCCTGTTGATGAAGTGCCTGAATggattttttggtttttg
tgaATTGAATCTTTAAGCAAGATTTACATTCGAAACTGCTCACCCAAGTG
ACCATGACCTTGTACTTGAAACACAGAATGAAATTTTGTTAGTTATTCGA
GGCTACCCGCTCCCATTAAGGATTGCTTTAGCGCTCGATCCTTCTACAAT
TGAAGTGCCTTTGAATGAATTTCTGAAGTTATTGGACATCTTCTCGAAAT
TCGGGAAGAGCTGTCTTCAAGTGCCCGAATATGACAAGTGTTTTCAAtgg
aattgttttgttttcatgaaATGGATTGCTTAAGATTTCATAGAGTAAAT
TTTGAAGTAGAAAGTTACTCCTGGTACTGGCTTGGGAGTCATTGCTGATA
CTACATACTGGAAGAAGTCATGCCCTCATCGAGTTCCTGTATTCGGGCCT
GTGAAAAATCTATTACTTAAAAGAcctaataaaaataattctgcTTCAGA
ATATCTACCCACTTAAAGTAAGAAAAATCAAGAATAGTATTTCTAATTTA
CCTGTATGTTAATTTCTGGAAgagacaaaaataaaattcattgttCACGA
AAAGTTGAATTAGTATTCAAAATTGCGTTAAAAATTACAgtttatcaaaa
ttaaattttgttcaCTTTGTTTAGTTAATTTTATGATGGAATTATAACTG
TTGGACTTTATTCGGTCTATCGCTGGGACTATCAAGAGAATTATCACCCA
ATTGTCTTTTTAAGGAATGTGATCTTTGAACATTAAGGTAGAATGATTTT
TAAAACTCCATTATTATGGATTGGACTACCATGGCGGACGCCTTGAATTT
ATTTACATGTAAAATTTAGTATCTATTTGGAAATGTTTTAGGGAAATTTC
AGTTTTTCAGCTTTCCTTTTTTGTTTCGTTCCAGTACACTGTATTATATA
AAGAATTGTATATATAGTCGAAAATCTTTGGTTGtgaatataaagttttt
tttaagatttcattATTTTGTTACTTGATAAACTatgattaaatttttag
ttaatTTCtgtaataccttaagggaagaaatttttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009559XLOC_009559Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017094-exon-sc0000259-1491911889:116563..116746TCONS_00017094-exon-sc0000259-1491911889:116563..116746Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1510915933:116563..116746TCONS_00017094-exon-sc0000259-1510915933:116563..116746Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1575043694:116563..116746TCONS_00017094-exon-sc0000259-1575043694:116563..116746Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1491911889:131152..132071TCONS_00017094-exon-sc0000259-1491911889:131152..132071Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1510915933:131152..132071TCONS_00017094-exon-sc0000259-1510915933:131152..132071Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1575043694:131152..132071TCONS_00017094-exon-sc0000259-1575043694:131152..132071Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1491911889:132362..132701TCONS_00017094-exon-sc0000259-1491911889:132362..132701Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1510915933:132362..132701TCONS_00017094-exon-sc0000259-1510915933:132362..132701Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1575043694:132362..132701TCONS_00017094-exon-sc0000259-1575043694:132362..132701Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1491911889:133085..133194TCONS_00017094-exon-sc0000259-1491911889:133085..133194Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1510915933:133085..133194TCONS_00017094-exon-sc0000259-1510915933:133085..133194Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1575043694:133085..133194TCONS_00017094-exon-sc0000259-1575043694:133085..133194Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1491911889:133750..133939TCONS_00017094-exon-sc0000259-1491911889:133750..133939Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1510915933:133750..133939TCONS_00017094-exon-sc0000259-1510915933:133750..133939Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1575043694:133750..133939TCONS_00017094-exon-sc0000259-1575043694:133750..133939Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1491911889:134686..134793TCONS_00017094-exon-sc0000259-1491911889:134686..134793Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1510915933:134686..134793TCONS_00017094-exon-sc0000259-1510915933:134686..134793Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1575043694:134686..134793TCONS_00017094-exon-sc0000259-1575043694:134686..134793Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1491911889:135475..135553TCONS_00017094-exon-sc0000259-1491911889:135475..135553Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1510915933:135475..135553TCONS_00017094-exon-sc0000259-1510915933:135475..135553Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1575043694:135475..135553TCONS_00017094-exon-sc0000259-1575043694:135475..135553Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1491911889:136492..137948TCONS_00017094-exon-sc0000259-1491911889:136492..137948Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1510915933:136492..137948TCONS_00017094-exon-sc0000259-1510915933:136492..137948Clytia hemisphaericaexon
TCONS_00017094-exon-sc0000259-1575043694:136492..137948TCONS_00017094-exon-sc0000259-1575043694:136492..137948Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000259supercontigsc0000259:116563..137948 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.53789	6.22449	11.3961	12.6642	2.76729	0.000145537	0.747742	0	3.64757	8.02992	7.52794	4.60186	4.35721	6.82926	5.09216	8.49616	5.90863	9.22023	5.4903	4.53948	9.30106	5.75787	5.87308	8.7916	1.22728e-10	0.871978	6.01549	5.8679	4.41352	5.1176
Blast
[Close]
BLAST of TCONS_00017094 vs. Swiss-Prot (Human)
Match: BTBD9 (BTB/POZ domain-containing protein 9 OS=Homo sapiens GN=BTBD9 PE=1 SV=2)

HSP 1 Score: 624.78 bits (1610), Expect = 0.000e+0
Identity = 295/559 (52.77%), Postives = 403/559 (72.09%), Query Frame = 3 
Query:  324 GEIDHMKMLSSQFKSLLHTEDFSDVTFLVEGRKFYCHKVILSARCEYFRALLFGGMKESNTNEGIPLLETSAASFAVLLEYLYTGIICLKDLKEENVIDLLGLANKYGLLDLQNSIGSYLESRINIKNVSLVYDVSCLYSLHDLRDNCLKFMDHNAVDILETEGFTNLSELAVTTIISRDSFCAPEVKIFKAVAKWIGVNIEEGAGYKHILKIIRLPLISLHDLFHGVRESSLYPSDVILDAIQMKTEYKVNDMPFRGHLEEETNLAQESNGAEVLTGEFKETLFNGEFSLYDLERGFTRHLIGDEEKDGIVIALGRPSIINTIRMLLWDKDQRSYSYVIECSLDNQNWTQLVDYSHYPCRSWQKIQFHPKVVRYIRVLGKSNTVNRYFHLVNFQCLFSNTICEVQNGIIVPTNNVSYILASALLIEGVSRNRNALIDGNTENYDWESGYTCHQIGSGCITIQLAQPYFIGSMRMLLWDCDNREYSYYIEVSTNQRDWVMVVDKRKENCKRWQNMTFEPRIVSFIKIVGTRNTANEVFHVVHFECPSSEPIERVVTQEE 2000
            GEIDH+ +LS    +LL  E++ DVTF+VE ++F  H+VIL+ARC+YFRALL+GGM+ES     IPL +T+A +F +LL+Y+YTG   L D KEE ++D L LA+KYG  +L++S   YL + +NI+NV + +DV+ LYSL  L   C  FMD NA ++L +EGF +LS+ A+  I+ RDSF APE  IF A+  W   N +E   +  I++ +RLPL+SL +L + VR S L   D ILDAI++++E +  D+ +RG L  E N+A    GA+V+ GE K  L +G+   YDL+ GF+RH I D+ + GI I LG+PSIIN IR+LLWD+D RSYSY IE S+D  +W +++D+S Y CRSWQK+ F  +V RYIR++G  NTVN+ FH+V F+C+F+N    ++ G+IVP  NV+ I   A +IEGVSR+RNAL++G+T+NYDW+SGYTCHQ+GSG I +QLAQPY IGS+R+LLWDCD+R YSYY+EVSTNQ+ W MV D+ K +CK WQ++TFE +  SFI+IVGT NTANEVFH VHFECP  +  ++    EE
Sbjct:   14 GEIDHVHILSEHIGALLIGEEYGDVTFVVEKKRFPAHRVILAARCQYFRALLYGGMRESQPEAEIPLQDTTAEAFTMLLKYIYTGRATLTDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTFDVASLYSLPKLTCMCCMFMDRNAQEVLSSEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLNWCKHNSKEN--HAEIMQAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSESRDMDLNYRGMLIPEENIATMKYGAQVVKGELKSALLDGDTQNYDLDHGFSRHPIDDDCRSGIEIKLGQPSIINHIRILLWDRDSRSYSYFIEVSMDELDWVRVIDHSQYLCRSWQKLYFPARVCRYIRIVGTHNTVNKIFHIVAFECMFTNKTFTLEKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQLGSGAIVVQLAQPYMIGSIRLLLWDCDDRSYSYYVEVSTNQQQWTMVADRTKVSCKSWQSVTFERQPASFIRIVGTHNTANEVFHCVHFECPEQQSSQKEENSEE 570
The following BLAST results are available for this feature:
BLAST of TCONS_00017094 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BTBD90.000e+052.77BTB/POZ domain-containing protein 9 OS=Homo sapien... [more]
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