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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017081 ID=TCONS_00017081|Name=TCONS_00017081|organism=Clytia hemisphaerica|type=transcript|length=1150bp
tgaaactcaatgtttatcaagaaactttttcttttccttgacgcgtataa
gaagcgtaaaagtcgacaaaaaaacaaacaaaaaagggCTAGGAAtaaat
tttctctgcgtacgtacattttcctttgacccctcccctcccccggTACG
CAAAcgtacgcttttgagaagaccccctctcccccctcttagtgcgtacg
tactatgtggataGCCCCTTATATTAGTCTCTTACAAAAAAACGTCTAGT
GTTGTAATTTAGTTTAAAACGAGGGAGGATCTCAAACAGAAATCAAGCGA
AAGAAACATGTCTAACCAAAATGGTGTGAAATCTTTTGATTGTCTGGTTG
AGAGTATAAACTGTCACTAAACGAATGTTCGCTTTCTATACTTCTGCATA
TTTTACTAATTTGTTTgtgttaaaaatcaaaacaacagaTCTTCGCCAAA
TTGTAagcaaataaataaattttccgTAATGTCTGTTTCAATGTTACGCT
CGCTTGGATTTCACCGCAAACACCGGCGGCTGAAACGCATTTTCGCATAA
AGTTTTCACTTTGATTCTtgatgaagaaattttttcttacttttttgtat
aattaaatcaaagtatttttttgatttcagtCCTAAGTGTATTTGTTAGT
GTTGAGATTGGATTTTGGGTTTTGGATTCTTTGACGTTGACGTTTGGATT
CTTTAATGTTGTTGTTTTCTCGCTTTGTTCGATATGGATTAAACCTTTCC
TATGCacacgtgtttttataaaaacataggGCTTTGATAGCCAACATATT
ACGAACAAGCtaagaacgttttaaggctCTGGAACTCTAAATCACCCgta
ttttaaggaaaattctCCAGGGAGGCAATCTACCAAAATAATTACGCTAC
TGGCTTTCTTCTTCTAGTAAAGTaagttcatttttcaattaGCCTTGTTT
GACTCAAATCTACACAcgcaaaaaattataaaaaattataaaattcgCCC
TGGTTGCTTTACGCATGCAACCATTGAGCACTCTTGTGGTGAATTGATTT
ATACATACCTTGTAAAAATCGCGATACAAAAATAATcagtttcaaaatgt
ttttcttgtgACAATGGGCTTTTGTCGTTACGTGAATGCTTAAAAAAGGG Run BLAST on NCBI transcript from alignment at sc0000257:128290..129439 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017081 ID=TCONS_00017081|Name=TCONS_00017081|organism=Clytia hemisphaerica|type=transcript|length=1150bp|location=Sequence derived from alignment at sc0000257:128290..129439 (Clytia hemisphaerica)
CCCTTTTTTAAGCATTCACGTAACGACAAAAGCCCATTGTcacaagaaaa
acattttgaaactgATTATTTTTGTATCGCGATTTTTACAAGGTATGTAT
AAATCAATTCACCACAAGAGTGCTCAATGGTTGCATGCGTAAAGCAACCA
GGGcgaattttataattttttataattttttgcgTGTGTAGATTTGAGTC
AAACAAGGCtaattgaaaaatgaacttACTTTACTAGAAGAAGAAAGCCA
GTAGCGTAATTATTTTGGTAGATTGCCTCCCTGGagaattttccttaaaa
tacGGGTGATTTAGAGTTCCAGagccttaaaacgttcttaGCTTGTTCGT
AATATGTTGGCTATCAAAGCcctatgtttttataaaaacacgtgtGCATA
GGAAAGGTTTAATCCATATCGAACAAAGCGAGAAAACAACAACATTAAAG
AATCCAAACGTCAACGTCAAAGAATCCAAAACCCAAAATCCAATCTCAAC
ACTAACAAATACACTTAGGactgaaatcaaaaaaatactttgatttaatt
atacaaaaaagtaagaaaaaatttcttcatcaAGAATCAAAGTGAAAACT
TTATGCGAAAATGCGTTTCAGCCGCCGGTGTTTGCGGTGAAATCCAAGCG
AGCGTAACATTGAAACAGACATTAcggaaaatttatttatttgctTACAA
TTTGGCGAAGAtctgttgttttgatttttaacacAAACAAATTAGTAAAA
TATGCAGAAGTATAGAAAGCGAACATTCGTTTAGTGACAGTTTATACTCT
CAACCAGACAATCAAAAGATTTCACACCATTTTGGTTAGACATGTTTCTT
TCGCTTGATTTCTGTTTGAGATCCTCCCTCGTTTTAAACTAAATTACAAC
ACTAGACGTTTTTTTGTAAGAGACTAATATAAGGGGCtatccacatagta
cgtacgcactaagaggggggagagggggtcttctcaaaagcgtacgTTTG
CGTAccgggggaggggaggggtcaaaggaaaatgtacgtacgcagagaaa
atttaTTCCTAGcccttttttgtttgtttttttgtcgacttttacgcttc
ttatacgcgtcaaggaaaagaaaaagtttcttgataaacattgagtttca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017081-exon-sc0000257-1491911889:128290..129439 | TCONS_00017081-exon-sc0000257-1491911889:128290..129439 | Clytia hemisphaerica | exon |
| TCONS_00017081-exon-sc0000257-1510915933:128290..129439 | TCONS_00017081-exon-sc0000257-1510915933:128290..129439 | Clytia hemisphaerica | exon |
| TCONS_00017081-exon-sc0000257-1575043694:128290..129439 | TCONS_00017081-exon-sc0000257-1575043694:128290..129439 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000257 | supercontig | sc0000257:128290..129439 . |
Blast
The following BLAST results are available for this feature:
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