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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017079 ID=TCONS_00017079|Name=TCONS_00017079|organism=Clytia hemisphaerica|type=transcript|length=1006bp
tttaagaatttctctagaataaactttaaaaattgttaTGACGAATGAAG
GtctatgaaaatattttggcttTTGTTAACGAATCATCTATTTTATTCAC
AGCCCAGTAGTGTAGACaagggggcgcaaaatttgtgtaaagGAGTAGAT
TTCTATGATGATGATGACACAGTATATGATGACACGCTATTCATAATATG
AAATTATAGTTACTGTGGCATAGAAATCTGCTCtgctacacaaattttgc
gcccccttgtctacgctactgcagCCTGACAGCCTGGATTGGAAATCTAt
tcaacttttaaatttttagtttaagCCGAGagatgaaaaactaaaaaaaa
actcaGTTCTTCCTTTAGAGAGAACACAAAAGCAAAGTATAAAGTTTGAA
TAATGGAAAAGCGAAAAAAACGAACACTGATTGTTTCATAAAATCGTTCT
CTCTTTCTCTCGCAGTAAGTAGTCTTTGCaaccaaaatcaaccaaaagtA
ACCAAAAGACGACCAACTTCCATCGTCCATCTCTTCAACAACAAACTTAA
TGAAAAAGCGCGCCAAACTCCTTTTATatcattttcagaagaaaaaaaat
tgataactCCCTCGAGAATGAAATTAACAAGACTATAATGTCAATTTCAT
CTTCAATTGAATATTTTCGACCCGACCCTCCCTCTGGTCGTAAAGTTGTT
AGGACCATACATTTGGTAATTTAGACAcactggctgcgtttagaccagcc
tgccATTTGTAATtacttgcagtattcttttgtaTTCTATTGTTCCGTGC
AATTGTTCAGTTTGTCAAATGCCttatgatgccagcgtgttggcatttca
ttggcatttgaaatgccattttgagaaaaggaatccccttttctggcatt
ttaaatcaaacaaaggaaccaaaacaaagagaaaaatgacattttttatt
ttttaaagtatttgcacgttttttattcagttctttctatagattgtaaa
atttgc Run BLAST on NCBI transcript from alignment at sc0000257:23619..24624 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017079 ID=TCONS_00017079|Name=TCONS_00017079|organism=Clytia hemisphaerica|type=transcript|length=1006bp|location=Sequence derived from alignment at sc0000257:23619..24624 (Clytia hemisphaerica)
gcaaattttacaatctatagaaagaactgaataaaaaacgtgcaaatact
ttaaaaaataaaaaatgtcatttttctctttgttttggttcctttgtttg
atttaaaatgccagaaaaggggattccttttctcaaaatggcatttcaaa
tgccaatgaaatgccaacacgctggcatcataaGGCATTTGACAAACTGA
ACAATTGCACGGAACAATAGAAtacaaaagaatactgcaagtaATTACAA
ATggcaggctggtctaaacgcagccagtgTGTCTAAATTACCAAATGTAT
GGTCCTAACAACTTTACGACCAGAGGGAGGGTCGGGTCGAAAATATTCAA
TTGAAGATGAAATTGACATTATAGTCTTGTTAATTTCATTCTCGAGGGag
ttatcaattttttttcttctgaaaatgatATAAAAGGAGTTTGGCGCGCT
TTTTCATTAAGTTTGTTGTTGAAGAGATGGACGATGGAAGTTGGTCGTCT
TTTGGTTacttttggttgattttggttGCAAAGACTACTTACTGCGAGAG
AAAGAGAGAACGATTTTATGAAACAATCAGTGTTCGTTTTTTTCGCTTTT
CCATTATTCAAACTTTATACTTTGCTTTTGTGTTCTCTCTAAAGGAAGAA
CtgagtttttttttagtttttcatctCTCGGcttaaactaaaaatttaaa
agttgaaTAGATTTCCAATCCAGGCTGTCAGGctgcagtagcgtagacaa
gggggcgcaaaatttgtgtagcaGAGCAGATTTCTATGCCACAGTAACTA
TAATTTCATATTATGAATAGCGTGTCATCATATACTGTGTCATCATCATC
ATAGAAATCTACTCctttacacaaattttgcgcccccttGTCTACACTAC
TGGGCTGTGAATAAAATAGATGATTCGTTAACAAaagccaaaatattttc
atagaCCTTCATTCGTCAtaacaatttttaaagtttattctagagaaatt
cttaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017079-exon-sc0000257-1491911889:23619..24624 | TCONS_00017079-exon-sc0000257-1491911889:23619..24624 | Clytia hemisphaerica | exon |
| TCONS_00017079-exon-sc0000257-1510915933:23619..24624 | TCONS_00017079-exon-sc0000257-1510915933:23619..24624 | Clytia hemisphaerica | exon |
| TCONS_00017079-exon-sc0000257-1575043694:23619..24624 | TCONS_00017079-exon-sc0000257-1575043694:23619..24624 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000257 | supercontig | sc0000257:23619..24624 . |
Blast
The following BLAST results are available for this feature:
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