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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017076 ID=TCONS_00017076|Name=TCONS_00017076|organism=Clytia hemisphaerica|type=transcript|length=1556bp
GTTTTAAGAGAGAAATTTCGATCTTTTGTGACCTCACACTGTGAATTCGA
CCAATGCGTATATTTAAAGATCTTTTATTTTAAAGCTTGTCTGTACTTTT
CATACCATCCCTTTTTCCCTTTTGAATAAAGGACCtaaaaaagtgatatt
tttaaTGGCAAGAATTATATTTGAATTCTTTGCACTTCATCTACGCAGTG
ATTAAAATCGAAGAAAGAATTTATATCTTATTCATTGTTATCTGTTACAC
CCCTGTCACAAATTAATTTGGTGTTTTGCGGAAAAGTAACAGAAGAATTC
GGAGTTATGTTCTGATTTTGATGGTGGACCAACCATAAAAATGAACATGT
AATTTATGATTATCCCTCAGTAGTATATCTTATAGAAATATAGGAGTGTT
TAAATTAAGAAATCAAGCAATTAGGGTTAATGAAATGAGTTATGTTGTTG
CTgattaaataaaatatatttttagtgcAAAAGAAATGAGTGGGTTAAAT
AAGATGCATCGAAAATAAATGGCTAATCAGGATAATCCGATTTGAATTCC
AATTTCAAAAAGATAATTAATGCCAGAGATTAAAGTCGTTAAAGAACAAT
CAGCAAGAATTCTTTTTTGATGGTACAATAACCTAAACCTTAAGTCTTTG
TGTTCTAAGGTTAAATCTTACATAAAAGCCagtgcaaaaaaacatctaaa
tAATGTCCAATTCAAACCCTAATTTTTTGTACGTCTTGAAAGAAGGAAAT
TTAGTAATCAAAAGGACCTCAATATGTACTTTTTCCTTTAGACATTTTTC
CTACACGATTTATACCATCTCAATAGAGGATCCTAAGGTATATTAGGTTT
CATTTGAAATCTTTGCGCTCTTTGGTTTTTTAGTTatcttttataaattt
tcagTATTAcgataaaatttccatttcttaCATTACGTAATCTATTACGA
CCCCTTTCTTGGAACAGTCTAGGCTAAGATTTAAGATCAGTCCTTCAGAC
TGTCAAGTTAATACAGTTTTCAATTTAAGCTTGTTTGAACCAATCACAGC
CGGCTATGTTTTTACAGTAACGGTGCATCAGTACAAAATATCGGGCCCGG
TTTCACACCAGTTTAATTGTCATCATTATACGATATTCTAAATAGTGGTT
TAGTCAACAAGTCCCCACCTTTTATTCAATCAAACTGCTCAAAAATCCAC
CTTTAAGGACTAACAGAGATGGGTCAAATTTTAGGTACGTAAAATCGCTT
GACGAGTCACGTATTTGCGTATTACGATCTTTATCTGTGTGTCTTTAcaa
ccctgtgtcacagatccgCTGGTACCCCATCCCAACCCGATCCCAActaa
aaaattttgcaaaacttCGTCCGgatgggaaaataccctggaatttcagc
cccactaagatattgactttgatttcattctcACTCGAAattcaagtttt
aaaaattgcactcaaaaACACTACTActcatattttttaattttggaaca
atagaattcttATCCCCATTGAGGAAAGAAGGGGAAGCGAGAAAGGGTTG
TACtca Run BLAST on NCBI transcript from alignment at sc0000257:8134..9689 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017076 ID=TCONS_00017076|Name=TCONS_00017076|organism=Clytia hemisphaerica|type=transcript|length=1556bp|location=Sequence derived from alignment at sc0000257:8134..9689 (Clytia hemisphaerica)
tgaGTACAACCCTTTCTCGCTTCCCCTTCTTTCCTCAATGGGGATaagaa
ttctattgttccaaaattaaaaaatatgagTAGTAGTGTttttgagtgca
atttttaaaacttgaatTTCGAGTgagaatgaaatcaaagtcaatatctt
agtggggctgaaattccagggtattttcccatcCGGACGaagttttgcaa
aattttttagTTGGGATCGGGTTGGGATGGGGTACCAGcggatctgtgac
acagggttgTAAAGACACACAGATAAAGATCGTAATACGCAAATACGTGA
CTCGTCAAGCGATTTTACGTACCTAAAATTTGACCCATCTCTGTTAGTCC
TTAAAGGTGGATTTTTGAGCAGTTTGATTGAATAAAAGGTGGGGACTTGT
TGACTAAACCACTATTTAGAATATCGTATAATGATGACAATTAAACTGGT
GTGAAACCGGGCCCGATATTTTGTACTGATGCACCGTTACTGTAAAAACA
TAGCCGGCTGTGATTGGTTCAAACAAGCTTAAATTGAAAACTGTATTAAC
TTGACAGTCTGAAGGACTGATCTTAAATCTTAGCCTAGACTGTTCCAAGA
AAGGGGTCGTAATAGATTACGTAATGtaagaaatggaaattttatcgTAA
TActgaaaatttataaaagatAACTAAAAAACCAAAGAGCGCAAAGATTT
CAAATGAAACCTAATATACCTTAGGATCCTCTATTGAGATGGTATAAATC
GTGTAGGAAAAATGTCTAAAGGAAAAAGTACATATTGAGGTCCTTTTGAT
TACTAAATTTCCTTCTTTCAAGACGTACAAAAAATTAGGGTTTGAATTGG
ACATTatttagatgtttttttgcactGGCTTTTATGTAAGATTTAACCTT
AGAACACAAAGACTTAAGGTTTAGGTTATTGTACCATCAAAAAAGAATTC
TTGCTGATTGTTCTTTAACGACTTTAATCTCTGGCATTAATTATCTTTTT
GAAATTGGAATTCAAATCGGATTATCCTGATTAGCCATTTATTTTCGATG
CATCTTATTTAACCCACTCATTTCTTTTgcactaaaaatatattttattt
aatcAGCAACAACATAACTCATTTCATTAACCCTAATTGCTTGATTTCTT
AATTTAAACACTCCTATATTTCTATAAGATATACTACTGAGGGATAATCA
TAAATTACATGTTCATTTTTATGGTTGGTCCACCATCAAAATCAGAACAT
AACTCCGAATTCTTCTGTTACTTTTCCGCAAAACACCAAATTAATTTGTG
ACAGGGGTGTAACAGATAACAATGAATAAGATATAAATTCTTTCTTCGAT
TTTAATCACTGCGTAGATGAAGTGCAAAGAATTCAAATATAATTCTTGCC
AttaaaaatatcacttttttaGGTCCTTTATTCAAAAGGGAAAAAGGGAT
GGTATGAAAAGTACAGACAAGCTTTAAAATAAAAGATCTTTAAATATACG
CATTGGTCGAATTCACAGTGTGAGGTCACAAAAGATCGAAATTTCTCTCT
TAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017076-exon-sc0000257-1491911889:8134..9689 | TCONS_00017076-exon-sc0000257-1491911889:8134..9689 | Clytia hemisphaerica | exon |
| TCONS_00017076-exon-sc0000257-1510915933:8134..9689 | TCONS_00017076-exon-sc0000257-1510915933:8134..9689 | Clytia hemisphaerica | exon |
| TCONS_00017076-exon-sc0000257-1575043694:8134..9689 | TCONS_00017076-exon-sc0000257-1575043694:8134..9689 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000257 | supercontig | sc0000257:8134..9689 . |
Blast
The following BLAST results are available for this feature:
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