TCONS_00017066 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017066
Unique NameTCONS_00017066
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length991

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017066 ID=TCONS_00017066|Name=TCONS_00017066|organism=Clytia hemisphaerica|type=transcript|length=991bp
AGCTCAATTCATTCGTGGAACCAAATCAATAATAAGTTCAAACCCTCCTG
TTCACATCGCTTAAGATTCCTTCAAGTTTTACTGTCTAAAGAAAACCAAA
CCAATAATGGCAGCTTCTCGTGATCATGACAACAACAACATGAACGGTTA
CTCCTCATCATCTAGCGAAGAAGACGTAAACATTGGATATCATTTTGAAC
TTGTTGAAAATGATTTCCAATGTATCATTTGCCACTATGTGATCAGAGGA
TTTACGGAGCTGCCATGTGGTCATGCTGGGTGCAAATTCTGCATTGAAGA
ATGGGAAAAACGTAAAGTAGCCTGCTGTGAATGCCAGGAAACCTACGACA
AAACCAAGAAAAATAGCAGTTTATACATCGATCGAACCATCAAGCATCAA
AGAAAGGCAGTTTGCAAGCAACACGAACAAGGCTGCACCTGGCAAGGCTC
CATTGCCGATTACAAAGATCAGCACCGCAAAGAGTGTGCATTCAGAAACG
TCAGATGTCGTTTGTGTAATCAAAAAGTCGCCCGTCATGAAAAGGAGGGA
CACAAGTTGACGTGTACACATCGTTTGGTTAATTGCACAACATGTGGTGG
CCAGTACAGCTTCATCAACAAAAAGaaacACGAAGATGAAGAATGCAAGG
TGCGATGCGATTATTGGCAATATGGTTGCCATGAAAAGGTATACAAACCA
CACATGGAGCGTCACCTTGCCAATTCAGCAAGACGTCATATCGAACTTGT
TAAAGCTCATTATGACAGAATTGTAACAGAACTTAACACGACAGTCAGCT
TGCAGAGTAAACACATTACAGAACTAACAACGCAActcaaagtaaataaa
atacCTATGGCAACCAGTTCAAGCTCACCAACGGTGAAACAGACAGTTAA
ACCGAAAACTCTCCCCAGACCTCCAATTCGAATTTACGAAAATGAAGAGG
AcaagcaacaacaacaaccaacaAATCCCTTTCGACCGGCT
Run BLAST on NCBI

transcript from alignment at sc0000257:320846..336936-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017066 ID=TCONS_00017066|Name=TCONS_00017066|organism=Clytia hemisphaerica|type=transcript|length=16091bp|location=Sequence derived from alignment at sc0000257:320846..336936- (Clytia hemisphaerica)
AGCTCAATTCATTCGTGGAACCAAATCAATAATAAGTTCAAACCCTCCTG
TTCACATCGCTTAAGGTTTGTCGATCTAAAATGAAATATTTCAGTTTTGT
TTCCTTTTCACTTGCTGAATTTGTTTTTAATTTATACTATTTTTTTGAAA
ATGTGAGTACAACCCTATCTCACAGTCCCGGTGAAACTTTTTTCCTCGGG
GGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGTAAAAAT
TCTATTGTTCCAAAATTAAAAAATATGAGTAGTAGTGTTTTTGAGTGCAA
TTTTTAAACATTGAATTTCGAGTGAGAATAAAATTAAAGTCAATATCTTA
GTGGGGCTGAAATTCCAGGGTATTTTCCCATCGGAACGAAGTTATTGCAA
AATTTTCCAGTGGGGATGGGGTCCCAGCGGATCTGTGACACAGAGGTGTA
AACAAAGACACATGGATAAAGATCGTAATAACGAAATGCGTGACTCGTCA
AGCGATTTTACATACCTAAAAATGGGCCCGTCTCTATAGTTAGTCCTCTA
CTGTGGATTTTTGAACAGTATGGTTGAAACAAAAGGTCGCGACTTATTGC
CTAAGCCACCATTTAGAGTAGTATATATGACGATTAAACTGTATTAAATT
GACAGTCTAAAGGATGACCTTAAATCTTAGCCTAGACTGACCCAAGAAAG
GGGGGCGTAATAGATTACTAATGTAGATTATGGGAATTTTTTCGTAATAC
TAAAAATTTTTGGACAACAACCAGAAAATCAAAAAGTGCACAGATTTCAA
ATAAAACCTACTACATAATATATCTCAGCTTGGGATCCTTTATTTCAAAC
TATTGAGATAATATAAATCGTAGGATAAATGTCTAAATAAAAATTAGCAG
TGCGAGCTTCTTTTGATTGCTAAATTTCAAACGTACAAACTAGGGTTTGA
GTTCCGCAGGCCATATTTTAGAAAGGCAGGGCAGCGTCCGTTGGTGGCCA
AAAAGGGCACTTTTTCTTGTGTTTTTCTGCTAAAAAGGCTGTTTTTACCG
AAATTTTAGAGACTTCAGGAGGGGCAGCGTCCGATGACCGGACGCTAAAA
GGGCATGAAAAATGGCCTGAGTTGGACATTATTTAGATCTGTTTAGATGT
TTTATTTTGCACTGGCTTTCATATGATCTTTAACTTAATAAAACAAAGAC
AAGATTTAAGTTATAATACCATTAAAAAAGAATGCTTGCTGATTGTTCTT
TAACGACTTTAATCTCACTGGCATTAAGTCTTTTTTGACATCGGAATTCA
AATCGGATTATCCTGATTAGTAATTTATTTTCGTTGCATCTTATTTAACT
CACTCATTTTTTTCGTAACTACGATTCCGAATTTAAATTAATGGATCTAT
TTTGTTTGAGTTTTAGTTCGTTTGGGTTTTATATTTCGTGCACGACACCT
TATCTCAATAAAGCGGTATCAATTAACAATTACACTAAAAATACATTTTA
TTTGATTAATCACAGTGCCGTAGGAAACATTTTCATATTGGGGGGGCTGA
AGTTTAATGACAAATTTGAGCTCTAGATTGCTTAAAAATACACTCAAAAC
ATGCACATAAAGACAATTATGACAAATTAAAAAAGAAAAACTTTGCATTT
TGCAAAATAACCATTTTTGAAAAAATTATTGGGGGGCATAGCCCCCTTGC
CCCCCAGTTGCTACGGCACTGCTGCAACAACATGACTCATTCCAATAACC
TTAATCTCTTGATTTCTTAATTGAAACACTATACTATGTTTTTGTATATA
AGATCTACTACTGTTACTGAGGGATAATCATATATTACATATTCATTTTT
ATGGTTGGTCCAACATCAAAATTATGAGTTCAACTCCGAATTCTTCTGTT
ACTTTTCCGCAAAACACCAATTAATTTGTGACAGGGGTGTAACAGATAAC
AATGAATAAGATAGAAATTCTTTCATCGATTTTAATCACTGCGTAGATAA
GATGCAAAGAATTCAAATATAATTCGTGCCATTAAAAAATATCACTGTTT
GAGGTCCTTTATTCAAAAGGGAAAAAAGGATGGTATCAAAAGTACTGACA
AGCTGCAATATAAAAGATCTTTAAATATACGCCTTGATCGAGTTCACAGT
GTGAGGTCACAAAAGATTGAAATTTTTCTCTCAAAACATACAAATTAGGT
TTTATTTTGAACGTTATCAAGATATCCGTTTTTATCCTCGCTTTTCAAAA
GAAGTAACTCTTAAAGGAATATAAAAGCAAAATGAACGTCATCAAAATAT
TCTTTTAGATCCTTTACTGAAAAGTTTGTTCTTTTAAAAACCTTTTTTTT
GTCTCACGACTGGTATGAGTTTTTTTGAAATGGAATTTCAATCAGATTAT
CTTGCTAAAAGACTTTTGACATTTGTTTTTTGATGCATTTGATTTTCAAT
GCATATCTTTTATTGTTTTTATCCTCCACAAAGTATTCTTGTTTTAATAT
AAATTTAAATTAATGCATTTGAATCTATTATCATTAAAAGTCCTTCAGCT
CTAACATTTCCTACTACATTACACAATAAATCTCTACTATCCTTAACATT
AACCATCCTTTATAAGCATTCAAATTTCTTTTGATCTAACTATATTTTTA
ATTTAATTCTTTTATTTAATTCTTTTAATTCTTGGATAGAATAAACTACG
ATTCTTGAACAGTTTCCACAAAACTCAAAAAGGTTCTTAGATAGAATAAA
CTAAGATTCTTGGATAGAATAAACTAAGATTCTTTGACAGAATAGACTAA
GATACTTTGACAGAATAGACTAAGATTCTTGGATAGAATATGTTTATAAG
AAAACCAAGGCTAAAAAATGCCAAAGAAAAAGGACAATTCTAACACCTAA
GAACAGCTAAGCCTCGTTAGAATATTACTCTTTCTTATAAAAAAGAGTTT
AGAATTAGGAGTTGGCTCTAGCGGATCATCAAGACTTTTGTTGTCTAAGA
TAAGCATCCCTGCAACGTCCTCTCACATTACATCACATTACATAATTCTG
TGAGCTCATAAATAATACCTAGATTAGGCAGTCCCAGGGTAAGACATTGG
CCAAAATGGGTTTTGGGTATGGACTTGTCTTGCTGGTCCGCCACCTTCAC
ATTGACCAGTCTAACTGACCAAAACAACAAAAAGTAAAAGAAAGAACAGT
TTCGACAAAACTCAAGAATATAGGAAGATTTTGTGCAAAAGTGCCGCTAG
AAATTTGAAACTCATCAATCACTGTTTTGTTCCTTCAGATTCCTTCAAGT
TTTACTGTCTAAAGAAAACCAAACCAATAATGGCAGCTTCTCGTGATCAT
GACAACAACAACATGAACGGTTACTCCTCATCATCTAGCGAAGAAGACGT
AAACATTGGATATCATTTTGAACTTGTTGAAAATGATTTCCAATGTATCA
TTTGCCACTATGTGATCAGAGGATTTACGGAGCTGCCATGTGGTCATGCT
GGGTGCAAATTCTGCATTGAAGAATGGGAAAAACGTAAAGTGTAAGTCAA
TACTTTATAGCTATTTCAACTTAGGATTACAAAGATTTGCCCGGTCAATA
AGTCAGGAAACTTTCTTTCGCGAAGTTTGGGAAAAATCATTTTCCATGCA
TAAACTTCTTGCGAATCTTTTGAGAGAATTAAAGTCCGATTTTGCAGTGG
AGATGATTTTAGTGACCCTTTCAATGAGATTGCGATTTCAAGTTCGTCTT
TCTGGGGGCGGTGTTATGACGGGTCTTCGACATAGGTTTGTAGATTGTAA
GGTTCACGTCTTTATTATCTTAATAGATTATAAATAGTAAATTTAAAAAA
GAGTTTCTTATAGAGAAAGTATATCTATAGAGGTTTGCGATTTAGACTAA
ATCTTTTCATACTTCATTTATTCTTCAGAGCCTGCTGTGAATGCCAGGAA
ACCTACGACAAAACCAAGGTAAATATTGCTAAGTATTTTCTGTTAAGCTT
TTCGTACCAAGGTGCCGTGAGCACCACAGTTTAGCTTTTTCTAAAATCAA
ACCTTTGAGGTCGGTAAATGAGAAATTTATGATTCAGTGACTTTACTATA
ACGGACCTTTACCATCTAGGGTGGTTACTTAGAAAAAAATACGGCACGGA
TGAAACAAAAAGAAATCCCTTAGGGATTGATATTTTGATCGCAGCTAGAT
TCTATACATTCTATTCTTTTCATATCAATTTTTTCACGAGAATAGTAAAT
TTTATTTGGTAATTAATGGACGTTTTCAAATATCAAGACGACTTGAAATT
TTTTTTGACGTCGCCTTTGGGACGAAGATGGTAAAGGAATAGTACAATAG
TTTTAAATGATATAAATCGCTCGAGAATGAAAACCATTGAGTTTAAAGCC
CGAAGGGCTAGAGTTCAATCTCTAACCTTTCTCAGGCAAGAAAAAATGAA
ACCTTAAAAAATGCGCCGTATTTTTGACGATAGATTGAATCTAGCAATTC
CTTTGTTTACGATTGATATTTTTTTCGAAATTTGGCGGTAAATTTTAGTT
TGAATCTGTCATTTGTGTAAAAACCAGGCGAGCCGCTCAAGGCTGCGCAG
CTTTAGTAGGATTTGAAGCCAACAAGAGATTGACTTCTAGCCTTCGGCTT
CTACTTCATTGATGAAAACGTCAAATATTTCATGTACAGGGTGTCCCTAA
TAAAAGTATCGAGTTTGAACATGCGATTGAGTAGAAAGTTTTAAGTGTGT
ATTCACAAAATTGTATTTTAAGCTCTCCCTCTTTTTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCATAATT
GAAAAATTTCGAGAAAACCTCATTTTTGCCCCATTTTGATGACGTCATAA
AAAGAAAATCTTGAATAACTTTAAGTTGGAGAAAGCTTTTGATTTCGAAT
TTTCACCAATGGTGTAAATCGACGAAAGGAAGCGATCTACGTAAAAAAAA
AATTTAAATTTTTGCTGACGTCAGCAAAATTCACAAAAAAAAACGTTTTT
GCTGAAATATGCTGACGTCAGCAAAGAATTTTAATTTTTTTTTTCTTAAA
TCGCTTCCTTTTATTGATTTACACATTTGGTGAAAATTGGAAGTCAAAGG
CTTTTACCTACTAGAAGTTATTCAAATTCTTTTTTCTGTGACGTCATCAA
AATCATGAAAATTGGCTAAAAAATTAGGTTTTTCTCAAAGATTTTCAAAT
TTTCAGCAAGTGGGACCATCTGACCATGCCCCATCCCATTTTCTATATCA
AAATGCTTCGAAAAAACCTAAAAAACATTTACGTTAAGGGGTGGAACCTC
ATGCGACCATTGGGGAGTGCCTTAGGTACCCCGAGATTGAGAACGTTCTT
ATATTTTAGCGATAACACACACAAACTTTTTTACTAAATCGCATGTTCAA
ACTCGATACTTTTATTAGGGACACCCTGTATATATAAAATTTGCTATTTC
ATTTAAGACTTACTTCACGTCCTCATTAAATTGGCCGTCCTAGATGCTAA
AGGTCCCTCTATTCAAAGAATCGAATATTGAGAGCAGTTATTCCCATGTG
AAACTTATAAAGTGTGAAACATCATATCTTATTATAGCATTACATATATC
TAGTTTTTTACAATTCTTCTGAGACTTAAAAATATCAGTGAAATGAGTTT
CTTTCAATCCTTGCCCTCACTCCAAAGTGTGTATTGGTAATTACCCAGCC
ATTAATAAATTTAAAATTATTTATAAATGTTAATTTAACCCTTTAAGTGC
CAATGTCGTATATATCAGACATGGGCTATGTAGGAGGGTGAGGCCCTCCT
GTAATGCCCAGTTTGAGTTAAAAATTGTCATTTTTGGTCTAACTCGTAGG
AATTGGATTGGGCTTTATGTTCAAGCAAAAAAAAATCAAAAGTGAGTCTT
TTCAGCGAGATTTCAAGCTAAAAAGTCAAAGAAATGCAAAAATGTGACAA
AAATCCATTCATTTTTTAAGAATTTGACCGTTTTTTGACCATTTTTGGTC
AACGAGTGATCCAAGAACCTCCAAATTTTGCCCTGATTTACTTGATTCTA
TCCTCCCTCGAATTAATTTGAAGTTTACCACTGGGCATCTTTCTATCATT
CAGGCAGGTCCGCGCAGCCCTGAATGCTTTAATTTCCCTTACCTACCCCC
CCCCTTAGCCGCCCATCCCGCCCTTTCTAAATCGGGTGGCGCTGAAGGCG
CCTAAAAGAAAGAGCAGACTACAAACGAGCTTCTAACTCCTTCTAGATCC
GGGGATAATATAAGACTTTAAAGTTTGAACTAGCAATTTTCTTTAAAAAA
CTTAGAAAAGATGACCGTGGCACTGTGGGTTAATGGATTCCTAATTATAT
AAAAATCTGTGTGGTATGCTCAATTTTAAAGTAAAACTTCGTTGTTTTTT
TTTAAATTAACTTTTGGAATGACAAAATTTCAAAGAAACTGTGTATTATG
TTGTGAGATCACTCTCTTTCAATGAATCTTTTCTCCCTTTCTTAACCGTG
ATTTGATTGTTACGGCTTTCATTCGGAATCCTGGATGATTGCCATGGTTA
CTTTTGGTGCCTCGGTGTGTACGTTGAATGAAATAGGAATTTGTCCTCAC
AGTAAAATAATCCTAACCCTTGTAAAGTATCTGCAAGCAAGAGATGTAAA
TTTAATTTTGTTAAAGAAAAATAGCAGTTTATACATCGATCGAACCATCA
AGCATCAAAGAAAGGCAGTTTGCAAGCAACACGAACAAGGCTGCACCTGG
CAAGGCTCCATTGCCGATTACAAAGATCAGGTAGGTACTTCATATTTCCT
AATTGGTTGCGATTCAAAGAAAATTCTATCTACATAAATTTCAGGAAATT
TTGAAGTGTGTCAAAACAACCCAGAAAACTTGTGAATCTAAAGTATGTGA
TTGTTAATGCCAAAAATTCGAGTTCGCTATGGTATGTTTAAAAATGTGTT
AAATCTTTCTCAGTAAATACCATCATCATCACAATAGCCAGCATTGTCAA
TACTTGTTCGTGTAATACGATACACCATCGGGAGTGTTTAACAGATGGCT
GGAATGATAATAGCCATATAACGTAAAAAATCTCAATTTTGACTTTAAAA
GCTCAAAACAAACTATAGTATAGAGAAAACGAGAAAGCTGATTAAATGAA
AAAGTAATACCTTAAGTTTTGAGTTAAAATAATGTGATTTCTAAACGTCC
GAACAATTGAAGTTATATATTCACCAAAGTTTTTCTAGAGCCACCAGTAG
AATAATAACTAATGCTAAAGGAGTTAGACATATGTAATTTGTACATAGCA
CCGCAAAGAGTGTGCATTCAGAAACGTCAGATGTCGTTTGTGTAATCAAA
AAGTCGCCCGTCATGAAAAGGAGGGACACAAGTTGACGTGTACACATCGT
TTGGTTAATTGCACAACATGTGGTGGCCAGTACAGCTTCATCAACAAAAA
GGTATAACTTTTGTTTTTCAACTTTTTTTTCAAGAGAAATACCCCTGATT
TAGTGGCCTTTTAAATCCTCTTGCAAATGTGGATGAAATAATTGAAAAAT
TCGAAAGCTAAAGAGTTTATCAAATTCAATAACATTAGGATAGGGTTCCA
CATAGACGATGCTATCGTCCGTATAATATGTTATTATGATATAACATAGT
TTGTATATTATAAAACGTAATATGTTTCGCGGCGGATAGAGTCTGTGTTT
TAAAATTCTCCTAGAGCAATTAGACAAAACATATGCCACATACACTGGTA
GATGCAAGTTTGCATTACGAAAAGATGAGTCTTTCAAAATAAAAACAAGA
TTCGCACAAATGCGACTAAATATTTCCCCATACACTTGCAGATGAACTGC
CTGATCGAAAAAAAAAACGTTTCAACTTGAGGCCGTCCAGGCTTGCGCAC
CGCACTGGGCTCGACTTCAGTAACTTTCGAATTATTTATTATTTAAAGGT
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAATTATTTATTATTTAAAGGTCTGATTGTAGCAGTTTAAGATTTT
GAAAAAAATGAAAACTCGACCCCAGGCCCAAAAATCAAAATTTTCAAAAA
ATAAATATGGTTTGTCTCTTAGCCAATCAGATTGCTTATATATTTCAAGT
TCAGGAAAGGAAAACAAAATTCGAGTTATGGAGCCAGAAAAGGGGAACAT
TCGATATATGGAGGTTTTTTATAAGAGTTTATTAGGAGATTTTCATGCTG
CCAACGAATTTGTTCGAGTTAAGGAGACGTTCGAGTAATAGGGGTTCGAG
TTATTGAGACTCTACTGTATTTAAAAAAGTAAGCTGATCTCCAGGATAAG
GAGATGCCTTGGAGTTTTTACAACATGCTTAACTGATTGGTTATTTTCAA
ACAATAGGGATGACATTTAACGACCAACAGAGTCATCAAAGAACTTGTAA
AAACTCCAGCTTGACCCAGGATGAGATGATAAAAACTTCGGGCATTACGA
TACGCTTATAAAAAAGTGTAGGCTAAAAAAGTAGAAACAAGTAATACTTT
AATGGACCTACCTATTTATAAAACGAATAATTAGAATTTAATGGAAGTAA
TGTATAATTTTAAATTTCGATTTATATATCTATTGGAACNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNATAAGTTGAAAAAATGAAGGAAAACCGTTTTACGCCGGTTTTCGGCTG
TTCCGGCGATTTTTAAGGAGTTCCGGATTCAAAGGATGATTTTTTTGGAA
ATCAAAAGATGCTAAGTTTTGGGCATCATCATAAAGAACATTTTTCTGTA
AAGAAACAATTAAATAAGTTGAAAAAATGTGACGGAAATATGAAAAAACG
ACGATTTCCGGTTCTACAGACCGGAAAAAAATTTTTTTCGGCAAACAGTT
TTCGACACCTTTTCGGCAGTACTAATGTGCATCTATGTGCAAAAAATCGC
AAAAAACTAATGATAAAATCTCGAGAAAATCTCAAAAAACCGCTTTTTTC
GGGACATTTCCGATTCTACCGGCCGGAAAATTTTTTTTTTCGAAAATCGG
GCTCCGTCACATTCGAGGGTTTATAGTATGTAATGCACCTTTGTGCAAAA
AATCAGAAAAATTGAATGAGCCAATCTCGAGAAAAGTTGGTAACTAACGT
ACGAACTAACTAACGAACACGGGTTAATTTATAGGACCTCCACCGGGGTA
GGTCCAAAAAGGGCTCGGTACTGAAAGGGTTAACAGCATACACTCTTTTT
TTATAAGAACGACCAGGCTTAGACTGAAACAATAGGTCTATTATTCTGGA
CAATAGAAAAAATAAGAACAAGCCTAGGCTTAACTCAAATTTGATGGTTC
TTATAAAAAAAGAGCGTAATGAGAGTTCATAACAAGAAAATGTCAAAGTG
AGGAACGTTGCATATTGTAGTCATGTGTTTTAAAAATTACACTGAATGTA
AACCTCAGATTAAGCACAAAATGTATATTAATATATATATATGTGTATAA
TGTATATTAAAAAATGTATAGTAAAGCTAAGTTTGTTAAAAATCAAGGAA
ACCAGCACAAATGGGATAGGCCAAATCAGCAGTTTTTACTGGAATCATAA
AGGCAAAGGTCAAGGAATTGCATTGTGACTGTTTTGTCATTTTTTTGGCA
ATGAATTCTTTAAGGGGCCATTCAAAAAAGTACGTTCGTCGCTGAGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGAGGGGGTCATCCAAAAA
GCGAACGAAAACGAACAGGGGGAGGGGGCCAGAAATCTAAGATTAAAAAC
GAACGTTTCACACATTTTGTGTGCTTGGTTGAAATTACCTTGGATTACCT
TCATGTTTATATTTCAGTATATTTATGTGGAAGTTTGTTGATATATGAAT
CTCTTGACACCAATCTAATCAACAAAAGAGGAGATGCTTTATTCTATCGA
TCTCTTTGTCAAGAATATATGTCAACTTGAAATATCGGACAATAGTTTTT
CTATCCACTTCTTTGTCGAGAATGTAAATCAATCTGCTCAAGCAGACAAG
GTTTACATTTTTGCCGTGTACGAAACATTGGAGCACTAAGGGGTTACTCA
CATATCGATTCTTCCCACGACTAACGTCAAATTGACGCGAAGGGGTGGGT
GGGTTAGAGTCTTTGACGCTAAGAAATTTCACCAGGAATATCGATTTTTA
ATACGTTTATTCCGTGACAAATGTTACTTTCCATATTTCTTTTCCTCCTT
TTTTACATACCTAGCTAAATATTCGTTCACTTTGCTATTTTACAGAAATT
TTAACCAAAACAAACGGCCCGATGTTTACGTCTCGAGTTCCTTTTGTTCA
GACGGTCCGCACGGGCCTTGAATTTCGCCCACGGTCTGTCTTTTTTTGTG
AAATGCGGCTTTTCTGTTGATTATGATTATGGAGATAATTAATTCCGACA
ACTTTCTGAAAACAGTTTAGAAATTATCTGCCTGAGCAAGCCGTAGCAAA
ATTAAAGATGGTTGACGACGAAACAACGATGAAAGTGAAGGAGAATTTTC
ATCGATTTTTGATAATTTTTTAACTTTGACGTTAAGAGGTGGGGGTGGGG
GGGTTTTCAAATTAGCGTCAATTTGACGTTAGTCGTGTGGGAAGAATCGA
TATGTGAGTGACCCCTCTAAAAGATAACACTACAACAATCCAAACAAGAA
ATGACGTCGCCGTTAAAACATTCAAAAATATCTATAAGCCAAGATGCAAT
ATGTTTATTAAATACACGCTCACAGTATCTCTAGTCAGGGAAAACAATCA
CACATTCAAAAGTGTCTTTACTTTAGTCAGGAAAACAACTTAAACAATCA
CACAAGTTTCAAAAGTTTAGAAAATCCACAAAACCTCTGACCTCATGAAT
GTAAGAACCAAGCATTAAAGACTTTGTTTTAGGGTCACTCGGTAAACAAA
TCTCGTATAACTTGTTCCAGAGATATTGTCGTCCATATAAGAGTTTGTAT
TTCAAAGCAAAAATATTTCTCGTACTGCCCATTTTTCTCATCAATTCTTC
AACTTGAACCAGTTTCACATCTCAATAGAATGTTATTACCATTTTGCCAA
CCATTTAATTTCCAAAGTTATGGGGATGTAGCGTTTTCTTCATGTCAAGC
AAATGTCTCTGAAATCTTTAAGTTGGTTGGTTTGGTATTCGGAAGAGGTA
ATCCATGGATATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTGAAAAACTCTTGAAATTACTGATGATTACAGTTGAA
GTGTTAGCCTCACATTTCATGTAATTATTGGTCGCCAATTAGATGAAAAT
TGTATATTTTTTGTTCGTCAGAAAAGAGTTATAACTTTTAAAAAGCCAAG
AGTGAATTTTCGTCCATCTTGTATTTTGATCTTAATTATTCGTGTCTTGA
TTACTCAAAGACATGCGCGTAACATCAAGGTAAATCCGTGCGATTTTGTC
TGAATAACTAAGGCAAATGAAAACAAAAACAAANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGCAAAA
AGGGCGTAAGTAGCCAAGGATCGGAGAAATGCCTTTTTAACTAATATTTC
CCCTTATAGCGGGGAAATATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGA
AGTTACAAAATAAAGTACTAACTAATAGGAGGCTAGACTCAAAAAATGCT
AAAGAATTGCACAAATAATTTCCACACCTACAGATTAACTTTCTGTCGCT
GTTTTGGAATCATTTTCCAGTCGGGTCCATCTCTATTAGCAGCAAGAATT
GGTGGCGGCAATTACCGGCCAGACCCGACTGTTTGTTTACATTTGTTCGA
ACCGGGCCGGCCGATCACACCGCTAACCAAAATCCAAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATATAGTCTAAGA
CAACAGCTACTCCCGTAAAAAATTCCCGTCTTCACGTTTGTTCCTCTTAG
ATGAAACTCGTCTTAGACTATAGCATAGTCTAGGTTCCACATAGTCTGTA
AGCAAGGATGGATCAGAAATCAATTTCCAAGGGTTATTTGAATATCATTC
TCTCTGTGGGTAGGACGTTTTTGTCCATGGCTTTATTATAATAGGTGTTT
TTACCGTCCTTTCTTAATCAATCTTCGTTTTTTTCATTTCAGAAACACGA
AGATGAAGAATGCAAGGTGCGATGCGATTATTGGCAATATGGTTGCCATG
AAAAGGTGAATTCTCTAGTTTTCTCTGGTACCAAATAAACGGTGGGGGGG
GGGTCTGAGTTGCATTATTGGCAATATGGTTGCCATGAGAAGGTGAATTC
TCTAGTTTTCTCTGGTACTAAATAAACAGGAGGGGGTCTGGGTTGCAATA
AACGGGAGATTTGGAAAAGTCTAAGATTCGATAAACGGGGTCTTTATTGC
CAATGGGTTTGAATTTGTCTATAAACTTAAAATTAAGGTAATACGACGGC
TTTTTAGAGAACAATAAGGAACTCTAAAAATACTCCTAAAAATCAATAAA
CCGTGGGAGGGAGGGTCCTACGAATGTCTGGTGGTATTGAGAGAATCGAA
AATGGGGGATAAAGCGTTTTTACGCACCTAAGATCACTTCAGCGCTTGGC
TCCCGAATATTAACAGAACTTCCACTTCTTGAAGAATTGGTTGCTGTGAC
ATTCTGAATTTGTTTACTTCGTTGTTTTTATTTTTTTATTTCGTACTCCA
GGTATACAAACCACACATGGAGCGTCACCTTGCCAATTCAGCAAGACGTC
ATATCGAACTTGTTAAAGCTCATTATGACAGAATTGTAACAGAACTTAAC
ACGACAGTCAGCTTGCAGAGTAAACACATTACAGAACTAACAACGCAACT
CAAAGTAAATAAAATACCTATGGCAACCAGTTCAAGGTATTTAAAGTAGT
GTGTTGGCTTTTGATTAATTTTATCTTGTTTTTTAAAACTTTTCCTACAG
CTCGGAAAGTCTCCCTTCTTAATAAGTGGTGACCAAGTATAGCAAATCAA
AATTTTATTACCTGAGTACTTTTATACTGCACACTAGCATACTAAAATCC
CAGAAAAAATACAAAATTGTTCAAAGTGCTCTTAAGCCCATGAAATGTAA
TAACTTTTTTCAACTCTTTTAATTTCATTTATTGCGGCTAGCCTAAAGCA
GGGCACGAAAGACGTCATATGGTCAATGACCAAAGAAAGAAAGTAATCTT
GCATGGTGTTAGTTTTGTTAAAACTCTGTTTTTTTGTAGGAGTTCAAGAA
AGTCTGAGGCTTCCAAAAATAGGGTGTAAAGATTGACCCTAACATAAGAA
CAGGATAAGAGCAATCTGAATTTCAACCTATCGAAAGAATCAAAACAGCT
CAATAAACTTTACTTGTAAAAAAAGAGATTTTATTGATCCAATTTAAGTG
GATTGTGTCAGTGACAATTAATTTATTGCAAGTATATCTCTCATTATATC
CACCCTACTATTTCATTTACTAGCTCACCAACGGTGAAACAGACAGTTAA
ACCGAAAACTCTCCCCAGACCTCCAATTCGAATTTACGAAAATGAAGAGG
ACAAGCAACAACAACAACCAACAAATCCCTTTCGACCGGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009538XLOC_009538Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017066-exon-sc0000257-1575043694:336872..336936TCONS_00017066-exon-sc0000257-1575043694:336872..336936Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1575043694:333146..333398TCONS_00017066-exon-sc0000257-1575043694:333146..333398Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1575043694:332719..332758TCONS_00017066-exon-sc0000257-1575043694:332719..332758Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1575043694:328957..329070TCONS_00017066-exon-sc0000257-1575043694:328957..329070Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1575043694:328286..328438TCONS_00017066-exon-sc0000257-1575043694:328286..328438Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1575043694:322232..322294TCONS_00017066-exon-sc0000257-1575043694:322232..322294Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1575043694:321551..321735TCONS_00017066-exon-sc0000257-1575043694:321551..321735Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1575043694:320846..320963TCONS_00017066-exon-sc0000257-1575043694:320846..320963Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1510915933:336872..336936TCONS_00017066-exon-sc0000257-1510915933:336872..336936Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1510915933:333146..333398TCONS_00017066-exon-sc0000257-1510915933:333146..333398Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1510915933:332719..332758TCONS_00017066-exon-sc0000257-1510915933:332719..332758Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1510915933:328957..329070TCONS_00017066-exon-sc0000257-1510915933:328957..329070Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1510915933:328286..328438TCONS_00017066-exon-sc0000257-1510915933:328286..328438Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1510915933:322232..322294TCONS_00017066-exon-sc0000257-1510915933:322232..322294Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1510915933:321551..321735TCONS_00017066-exon-sc0000257-1510915933:321551..321735Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1510915933:320846..320963TCONS_00017066-exon-sc0000257-1510915933:320846..320963Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1491911889:336872..336936TCONS_00017066-exon-sc0000257-1491911889:336872..336936Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1491911889:333146..333398TCONS_00017066-exon-sc0000257-1491911889:333146..333398Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1491911889:332719..332758TCONS_00017066-exon-sc0000257-1491911889:332719..332758Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1491911889:328957..329070TCONS_00017066-exon-sc0000257-1491911889:328957..329070Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1491911889:328286..328438TCONS_00017066-exon-sc0000257-1491911889:328286..328438Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1491911889:322232..322294TCONS_00017066-exon-sc0000257-1491911889:322232..322294Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1491911889:321551..321735TCONS_00017066-exon-sc0000257-1491911889:321551..321735Clytia hemisphaericaexon
TCONS_00017066-exon-sc0000257-1491911889:320846..320963TCONS_00017066-exon-sc0000257-1491911889:320846..320963Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000257supercontigsc0000257:320846..336936 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.977845	0.451306	0.459575	0	1.00672	0.74754	1.58674	1.47314	1.41897	1.38608	0.56162	1.27211	10.2308	8.32272	2.03143	2.51464	2.14325	2.18777	26.897	11.8928	2.64547	3.26424	2.28007	3.99263	1.359	2.00101	4.94236	4.39521	0.57959	0.397198
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017066 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top