|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016974 ID=TCONS_00016974|Name=TCONS_00016974|organism=Clytia hemisphaerica|type=transcript|length=1046bp
CAGTCATACAAAATTCAACAAACCGCAGTTGATAAGAATCCAGAAAGAAA
ATTTCGTCTCTTATTTTCATTAGTATGGGAAGttcaaagattttcattta
ggCGAGGCAAATTTAATCTATTTTTCTACTTACTTAAATCCTATTAGACC
TAGATCGTGGAACAATGTTTAAGAAATGGACATtgaaaaATtgaaaaatg
ggaaaatctTTACAAGATTATTTTTATTAGGTACCTACACGACTACCTAA
CTTGAGGACAGAAAAGTTCTTTAGTTATTTAAGTTTCCTTAAAGTATGTA
CTCTTAGGCCAATAAAAATCCTGAATAAATATAGACTATCCTACAAATAA
AAGTTTAACAAGTTCAAAATTATCTCTTCATTTGACTGCAATAAATTGTT
AGATAATTCAGATTATCACACCACTCACAAATTGCTCATTAAATCTCCTA
AGCCAGCAACCTCAAACTCTAACGTACACAATACATGTCCCATTACATAA
ATATAACGCTAAATGACGAACCAAATTTGCCAAACCCATATTCAATTCAA
AGACTTTGCCGAAAGAAACCATCAAAAATTCCCATCTAGTGCTTATTTTA
ACATAGGAATATTAAGCCAAACCAAAACCATATCAGAGTGTGAGCAAAAG
TTTCCTCGAGTCTCCAATATGTCATATTCGATTCAAAATAGTCAAAGAAA
AGGGACGAGAGATGATGTTCTTCCGTGCTGCATTGGTAGTCACAATGTTT
TATTTGCCTTCCAACAGGTGATCCAGTATGTCAAAACAAAttgaaatctc
gaaaagtcaTTGATAATTATGTCATGTTATGTTAGTGGGCCAATTTGAAG
GAAGATGAACCCTTAAAAAGCCTGGATAATGATGCAGTAACTTTTCTTCT
GTCTTTAAAAAAGGTCAAAGGTAATTAAAGAATAATAACCAGTCAAGTTT
AGAAACAATATCCTTGTATAAAGTAACCAGAATTCCACACAAGATgcgtt
ttttctttttaattttactttttactgaaatgaaaaggaaattttt Run BLAST on NCBI transcript from alignment at sc0000255:282746..283852- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016974 ID=TCONS_00016974|Name=TCONS_00016974|organism=Clytia hemisphaerica|type=transcript|length=1107bp|location=Sequence derived from alignment at sc0000255:282746..283852- (Clytia hemisphaerica)
CAGTCATACAAAATTCAACAAACCGCAGTTGATAAGAATCCAGAAAGAAA
ATTTCGTCTCTTATTTTCATTAGTATGGGAAGTTCAAAGATTTTCATTTA
GGCGAGGCAAATTTAATCTATTTTTCTACTTACTTAAATCCTATTAGACC
TAGATCGTGGAACAATGTTTAAGAAATGGACATTGAAAAATGGGAAAATC
TTTATTATTATATTAGACATAGATCGTGGAACAATGTTTAAGAAATGGAC
ATTGAAAAATGGGAAAATCTTTACAAGATTATTTTTATTAGGTACCTACA
CGACTACCTAACTTGAGGACAGAAAAGTTCTTTAGTTATTTAAGTTTCCT
TAAAGTATGTACTCTTAGGCCAATAAAAATCCTGAATAAATATAGACTAT
CCTACAAATAAAAGTTTAACAAGTTCAAAATTATCTCTTCATTTGACTGC
AATAAATTGTTAGATAATTCAGATTATCACACCACTCACAAATTGCTCAT
TAAATCTCCTAAGCCAGCAACCTCAAACTCTAACGTACACAATACATGTC
CCATTACATAAATATAACGCTAAATGACGAACCAAATTTGCCAAACCCAT
ATTCAATTCAAAGACTTTGCCGAAAGAAACCATCAAAAATTCCCATCTAG
TGCTTATTTTAACATAGGAATATTAAGCCAAACCAAAACCATATCAGAGT
GTGAGCAAAAGTTTCCTCGAGTCTCCAATATGTCATATTCGATTCAAAAT
AGTCAAAGAAAAGGGACGAGAGATGATGTTCTTCCGTGCTGCATTGGTAG
TCACAATGTTTTATTTGCCTTCCAACAGGTGATCCAGTATGTCAAAACAA
ATTGAAATCTCGAAAAGTCATTGATAATTATGTCATGTTATGTTAGTGGG
CCAATTTGAAGGAAGATGAACCCTTAAAAAGCCTGGATAATGATGCAGTA
ACTTTTCTTCTGTCTTTAAAAAAGGTCAAAGGTAATTAAAGAATAATAAC
CAGTCAAGTTTAGAAACAATATCCTTGTATAAAGTAACCAGAATTCCACA
CAAGATGCGTTTTTTCTTTTTAATTTTACTTTTTACTGAAATGAAAAGGA
AATTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016974-exon-sc0000255-1575043694:283664..283852 | TCONS_00016974-exon-sc0000255-1575043694:283664..283852 | Clytia hemisphaerica | exon |
| TCONS_00016974-exon-sc0000255-1575043694:282746..283602 | TCONS_00016974-exon-sc0000255-1575043694:282746..283602 | Clytia hemisphaerica | exon |
| TCONS_00016974-exon-sc0000255-1510915933:283664..283852 | TCONS_00016974-exon-sc0000255-1510915933:283664..283852 | Clytia hemisphaerica | exon |
| TCONS_00016974-exon-sc0000255-1510915933:282746..283602 | TCONS_00016974-exon-sc0000255-1510915933:282746..283602 | Clytia hemisphaerica | exon |
| TCONS_00016974-exon-sc0000255-1491911889:283664..283852 | TCONS_00016974-exon-sc0000255-1491911889:283664..283852 | Clytia hemisphaerica | exon |
| TCONS_00016974-exon-sc0000255-1491911889:282746..283602 | TCONS_00016974-exon-sc0000255-1491911889:282746..283602 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000255 | supercontig | sc0000255:282746..283852 - |
Blast
The following BLAST results are available for this feature:
|
