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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016853 ID=TCONS_00016853|Name=TCONS_00016853|organism=Clytia hemisphaerica|type=transcript|length=1507bp
GTGCAAGTTACCTTAGCCTGGGTAAAAAAATCAATGTTATCATCATGGag
ctaatgtttttttttctctaagcTAAACATCTGTCAGTTTTGTGGCCATG
AAAACTTTTACCGgtcctaaaaaaaaaattcaaaatcctaATTACTTTCG
AATCAATCATATGCGGTCAAGGCAAAAGTTACGGGTCCTAAGGGTTGGac
tcctactattctattgtGTCCATCTTTATCTTCTGCACCTATTTTTGGTC
GAAAACAAGTTTAAcacattattttgtttttttttggtagATGCAAGGAG
TGATCCTCCGCCTCCACCTTTTTTCATTCTTCCATCAAGTTTATCCACAA
TAAAGATCTAATTACATGGTTTTCATAGATGAAAATATTATAGGTGATAT
TTACTAAAAAGCTCAACGAACTTGTTGAAATTCGTCGCGTTTTTCAGTAG
GTATCCCTAAACAACCTAGAGAAAACCAAAGACTTCATTCAAACTCGAAT
CCAGTCCCTTAGCTCACTtatttatgattctgatagcgctcacgatTGCA
TCACAAccatcagtaaaataaaaaaagtggaGCAAGTCTTTTTAGGTACG
AGATTGAATTTCATTCTCGATATGCATTGAATTGAAGCCCCAGTTTATCT
CCCGGTTAAGTTAAATAAATACAGGCGTTAATATTTATGATGTTATTATA
AATTTCagtagttttattttgtttctttgGAACAGGCCACGACTCGCCAC
GGATCTTGCCTTCGGCGACGTGTATTCCAGAACATATCCAAAACAGTTCT
TGAATTTTCAATCCACTGATAACTAGCAAACACAGTTGTAGCAGCAGTTG
GTTCATTCTTGCTTTTCATGTCATTTCAATGTCCATATTTGCAGCCAGAT
CATGCGTTCAGTCGATCGAATTCCATCAATCGAGAGCTGTCACCTAACAA
GTGTGGAAATCCCTTCCGTAaggaatttttcgaaaatcactgATCATCAA
TGTTGGTACGTATAACTCAGCAACCTTCTGTTTCCTTGTATAGCATCCAT
CTAGCCTGTGATAAGATGAATGCTTCAAATTGAAGAAACCAGACAAGGCC
AGCGGCTGGAAGCTCAAAACCATTGACTTTGGAGAATCGCCTGAGTTGAA
CAATGTCCAGCTTTAGCCTTGTCCATCGCCCATAAATGCGTTTCTTTCAt
aaagctttaaaaagctttttcaagAAATTCATAAATGAGTGATTGTTTTT
ATAGTAAAGATAAagataaagatgaagatttgttttgttttgtgatCCCA
TGCTTGCCATCAGCTCCTCTGTAAGTCCAGTCTCCGGTTGGCTCGGTTGG
GCAGGGACGCCAATACCCTGGGATAGCTCCGAGTTTCGGAAAGCTTTCCA
CCGTACCCCTGGACGATTGACTTGTTAAGTGATTGCCGATGACCAACGTC
GAGAATttatagaattgaaatcaaaCCCTACTGCTGTGAAAATTcctttt
atctttg Run BLAST on NCBI transcript from alignment at sc0000253:155990..157496+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016853 ID=TCONS_00016853|Name=TCONS_00016853|organism=Clytia hemisphaerica|type=transcript|length=1507bp|location=Sequence derived from alignment at sc0000253:155990..157496+ (Clytia hemisphaerica)
GTGCAAGTTACCTTAGCCTGGGTAAAAAAATCAATGTTATCATCATGGag
ctaatgtttttttttctctaagcTAAACATCTGTCAGTTTTGTGGCCATG
AAAACTTTTACCGgtcctaaaaaaaaaattcaaaatcctaATTACTTTCG
AATCAATCATATGCGGTCAAGGCAAAAGTTACGGGTCCTAAGGGTTGGac
tcctactattctattgtGTCCATCTTTATCTTCTGCACCTATTTTTGGTC
GAAAACAAGTTTAAcacattattttgtttttttttggtagATGCAAGGAG
TGATCCTCCGCCTCCACCTTTTTTCATTCTTCCATCAAGTTTATCCACAA
TAAAGATCTAATTACATGGTTTTCATAGATGAAAATATTATAGGTGATAT
TTACTAAAAAGCTCAACGAACTTGTTGAAATTCGTCGCGTTTTTCAGTAG
GTATCCCTAAACAACCTAGAGAAAACCAAAGACTTCATTCAAACTCGAAT
CCAGTCCCTTAGCTCACTtatttatgattctgatagcgctcacgatTGCA
TCACAAccatcagtaaaataaaaaaagtggaGCAAGTCTTTTTAGGTACG
AGATTGAATTTCATTCTCGATATGCATTGAATTGAAGCCCCAGTTTATCT
CCCGGTTAAGTTAAATAAATACAGGCGTTAATATTTATGATGTTATTATA
AATTTCagtagttttattttgtttctttgGAACAGGCCACGACTCGCCAC
GGATCTTGCCTTCGGCGACGTGTATTCCAGAACATATCCAAAACAGTTCT
TGAATTTTCAATCCACTGATAACTAGCAAACACAGTTGTAGCAGCAGTTG
GTTCATTCTTGCTTTTCATGTCATTTCAATGTCCATATTTGCAGCCAGAT
CATGCGTTCAGTCGATCGAATTCCATCAATCGAGAGCTGTCACCTAACAA
GTGTGGAAATCCCTTCCGTAaggaatttttcgaaaatcactgATCATCAA
TGTTGGTACGTATAACTCAGCAACCTTCTGTTTCCTTGTATAGCATCCAT
CTAGCCTGTGATAAGATGAATGCTTCAAATTGAAGAAACCAGACAAGGCC
AGCGGCTGGAAGCTCAAAACCATTGACTTTGGAGAATCGCCTGAGTTGAA
CAATGTCCAGCTTTAGCCTTGTCCATCGCCCATAAATGCGTTTCTTTCAt
aaagctttaaaaagctttttcaagAAATTCATAAATGAGTGATTGTTTTT
ATAGTAAAGATAAagataaagatgaagatttgttttgttttgtgatCCCA
TGCTTGCCATCAGCTCCTCTGTAAGTCCAGTCTCCGGTTGGCTCGGTTGG
GCAGGGACGCCAATACCCTGGGATAGCTCCGAGTTTCGGAAAGCTTTCCA
CCGTACCCCTGGACGATTGACTTGTTAAGTGATTGCCGATGACCAACGTC
GAGAATttatagaattgaaatcaaaCCCTACTGCTGTGAAAATTcctttt
atctttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016853-exon-sc0000253-1491911889:155990..157496 | TCONS_00016853-exon-sc0000253-1491911889:155990..157496 | Clytia hemisphaerica | exon |
| TCONS_00016853-exon-sc0000253-1510915933:155990..157496 | TCONS_00016853-exon-sc0000253-1510915933:155990..157496 | Clytia hemisphaerica | exon |
| TCONS_00016853-exon-sc0000253-1575043694:155990..157496 | TCONS_00016853-exon-sc0000253-1575043694:155990..157496 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000253 | supercontig | sc0000253:155990..157496 + |
Blast
The following BLAST results are available for this feature:
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