TCONS_00016807 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016807
Unique NameTCONS_00016807
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3129

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016807 ID=TCONS_00016807|Name=TCONS_00016807|organism=Clytia hemisphaerica|type=transcript|length=3129bp
TTCCTTTTCTACAAACAACTCAACGAAACAAGATGCCAGTCTTAACGCAA
CATTTTCATTCGAAGTAAACGCTCAAACTTCATCGAATAATTCCAGCGTT
CAATATAACACATTTTAAACAACGAGGCACGGACCATAAGACCGCTTTTT
AAACATTTCAATACAAACAAAATGTCTGGTCTCTCCACTCACAAAACCAG
CTCAGCGGGTAAATATGACACTGAACAACACCCGCAAGGGCTGAAGACCA
ACAAACAAAAACTGATGGATGCTTCCCGCAGTGTCATCAACATGGATTCT
GGCATCAGTCCAAACCAACACGAAATCATATTACGACACCTGGAGAAACT
CGAGAAGAGCTCCCAAGGGAACATTCCAAATTCACACATCACATCATGTG
GATCACTCAGCAGCCGACAGACATCAATCGAGCGCTTAGCTCAAGATTTA
ACTAAATCCACCTATGACAATACTTCAACTGCCCAACTTCTACAGTCGTT
GTCAGTTCTTCAGGGTGAGAGATCGGACATTCCTGCTATGAGGAAAGACA
TCGATTCTCTAAAACGCTCAGTCGATAGCACGCACACCATCTTGAAACAT
TTGTGCGTTGTGGTGATGGAGGGGAACAAATCATCCGGTGCTGAACCACC
ATCGGCGCCCAATGGCGTTCCCTTTGAAGAACACAAGAGGGTGGTGTCGG
AAAAAGACGTCCAAATCCAGCGAATTAAACAACATGCTGAGACTATGTTC
GACGAGTATCGATGCCACATCGAGAAACTCAAGGATGAAAAGGCATTATT
GGCTGGCGAAGTGATAAGCCTTAAAACAACAATGTCTAATGTCTTTACGG
CTGAGATAGAAGCGAGGAATCTAACCATCGCCTCACAATCACAACACATT
GATAAGTTGAGCACGGAATGCTCGAAATTGATTTTCTTATTGGAGGAAGC
TAAACACCAGTTAAGAGAGAAAGCGCTTGTCAAAAGCAAGATGTCTGGAA
CTTTTCCATCCTCCGCTAGTCAACAGACACAAACTGAACACGTTGAACAC
GTATCATCAGTTAGTGATGTCCAGCAaaccaaatctgcccacatggagga
cgtaTCATCAGTCTGTGATGTGGAACGaaccaaatctgcccacatggaga
ACGTAGCACCAGTCTGTGATGTGGAGCAAACTAAATCTGCCCATATGAAG
GACGTAGCACCAGTCTGTGATGTGGAAGAaaccaaatctgcccacatgga
ggacgtaTCATCAGTCTGTGATGTGGAGCAaaccaaatctgcccacatgA
AGGACGTAGCACCAGTCTGTGATGTGGAGCAAACCAAATCTACCCACATG
GAGCACGTATCATCAGTTAGTGATATGGAGCAaaccaaatctgcccacat
ggaggaTGTAGCACCAGTCTGTGATGCCCAGCAaaccaaatctgcccaca
tggaggacgtaGCACCAGTCTGTGATGTGGAGCAaaccaaatctgcccac
atggaggacgtaTCATCAGTTAGTGATGTGGAAGAaaccaaatctgccca
catggaggacgtaGCACCAGTCTGTGATGTGGAGCAAACCAAATCTGCCC
AAATGGAGCACGTAGCACCAGTCTGTGATGTGGAGCAAACCAAATCTACC
CACATGGAGGACGTAGCACCAGTCTGTAATGTCCAGCAGaccaaatctgc
ccacatgAAGGACGTAGCACCAGTCTGTGATGCCCAGCAaaccaaatctg
cccacatggaggacgtaTCATCAGTTAGTGATGTCCAGCAaaccaaatct
gcccacatggaggacgtaGCACCAGTCTGTGATGTGGAGCAaaccaaatc
tgcccacatgAAGGACGTAGCACCAGTCTGTGATGCCCAGCAaaccaaat
ctgcccacatggaggacgtaGCACCAGTCTGTGATGTGGAGCAaaccaaa
tctgcccacatgAAGGACGTAGCACCAGTCTGTGATGCCCAGCAaaccaa
atctgcccacatggaggacgtaGCACCAGTCTGTGATGTGGAGCAAACCA
AATCTGGCCACATGGAGGACGTATCATCAGTTAGTGATGCCCAGCAaacc
aaatctgcccacatggaggacgtTGCACCAGTCTGTGATGTGGAGCAaac
caaatctgcccacatgAAGAACGTAGCACCAGTCTGTGATGCCCAGCAaa
ccaaatctgcccacatggaggacgtaTCATCAGTTAGTGATGCCCAGCAa
accaaatctgcccacatggaggacgtTGCACCAGTCTGTGATGTGGAGCA
aaccaaatctgcccacatgAAGAACGTAGCACCAGTCTGTGATGCCCAGC
AaaccaaatctgcccacatggaggacgtaGCACTAGTCTGTGATGTGGAG
CAaaccaaatctgcccacatggaggacgtaGCACCAGTCTGTGATGTGGA
GCAaaccaaatctgcccacatAGAGCACGTAGCATCAATTAGTGATATCG
AAAAGACACAACCTGACCATTTGAGTGACTCTCCCTCTAATGACACTAAT
GCCCAGACTGGGTCGTCATCCAACAAAGATACCGTCGAATCTGCACGGCA
AAATCAGAAACCACGTCGTACCATGTGGTATACattattgaatgattttt
ttgaaagattctactaaaatcaaagttttcaaaagcaATTGTATCGAAAT
GTGAAGAAAGGAAcgaaaaaaatttgtttctatATTCTATTCTCTCTGAA
GATCATCAATTAAGTAAAAGAAACTAGCAGAGAAACAGAACAATTCATGT
CCTTTGGACCTTATGCTTATATTATTGCTCGACTCATTAAATATCTCATC
GGGAAAAGGTGGACAGGACTTTTGAAACTAACAGCATCTTATCCGCCCAA
AGCCTCAAAAGTTTTGGCCTCCTTGCTGTTGGCATAATTAAGTAGCCTCC
AATATGAAGAGCATGAGATTCAAAGTGTATGAATATATCCTGATCCCTGC
TAATGGCTTTTGCCTTTTTGATGATACCACAGTGAGTTAGAATATCGAaa
caaagtttctttgtttatttctttGCATATTGATACGATTGCTGTGTATA
TTGTACATAATTTTTCTTGTCATATCCGC
Run BLAST on NCBI

protein sequence of TCONS_00016807-protein

>TCONS_00016807-protein ID=TCONS_00016807-protein|Name=TCONS_00016807-protein|organism=Clytia hemisphaerica|type=polypeptide|length=831bp
MSGLSTHKTSSAGKYDTEQHPQGLKTNKQKLMDASRSVINMDSGISPNQH
EIILRHLEKLEKSSQGNIPNSHITSCGSLSSRQTSIERLAQDLTKSTYDN
TSTAQLLQSLSVLQGERSDIPAMRKDIDSLKRSVDSTHTILKHLCVVVME
GNKSSGAEPPSAPNGVPFEEHKRVVSEKDVQIQRIKQHAETMFDEYRCHI
EKLKDEKALLAGEVISLKTTMSNVFTAEIEARNLTIASQSQHIDKLSTEC
SKLIFLLEEAKHQLREKALVKSKMSGTFPSSASQQTQTEHVEHVSSVSDV
QQTKSAHMEDVSSVCDVERTKSAHMENVAPVCDVEQTKSAHMKDVAPVCD
VEETKSAHMEDVSSVCDVEQTKSAHMKDVAPVCDVEQTKSTHMEHVSSVS
DMEQTKSAHMEDVAPVCDAQQTKSAHMEDVAPVCDVEQTKSAHMEDVSSV
SDVEETKSAHMEDVAPVCDVEQTKSAQMEHVAPVCDVEQTKSTHMEDVAP
VCNVQQTKSAHMKDVAPVCDAQQTKSAHMEDVSSVSDVQQTKSAHMEDVA
PVCDVEQTKSAHMKDVAPVCDAQQTKSAHMEDVAPVCDVEQTKSAHMKDV
APVCDAQQTKSAHMEDVAPVCDVEQTKSGHMEDVSSVSDAQQTKSAHMED
VAPVCDVEQTKSAHMKNVAPVCDAQQTKSAHMEDVSSVSDAQQTKSAHME
DVAPVCDVEQTKSAHMKNVAPVCDAQQTKSAHMEDVALVCDVEQTKSAHM
EDVAPVCDVEQTKSAHIEHVASISDIEKTQPDHLSDSPSNDTNAQTGSSS
NKDTVESARQNQKPRRTMWYTLLNDFFERFY
Run BLAST on NCBI

transcript from alignment at sc0000252:100887..107020-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016807 ID=TCONS_00016807|Name=TCONS_00016807|organism=Clytia hemisphaerica|type=transcript|length=6134bp|location=Sequence derived from alignment at sc0000252:100887..107020- (Clytia hemisphaerica)
TTCCTTTTCTACAAACAACTCAACGAAACAAGATGCCAGTCTTAACGCAA CATTTTCATTCGAAGTAAACGCTCAAACTTCATCGAATAATTCCAGCGTT CAATATAACACATTTTAAACAACGAGGCACGGACCATAAGACCGCTTTTT AAACATTTCAATACAAACAAAATGTCTGGTCTCTCCACTCACAAAACCAG CTCAGCGGGTAAATATGACACTGAACAACACCCGCAAGGGCTGAAGACCA ACAAACAAAAACTGATGGATGCTTCCCGCAGTGTCATCAACATGGATTCT GGCATCAGTCCAAACCAACACGAAATCATATTACGACACCTGGAGAAACT CGAGAAGAGCTCCCAAGGGAACATTCCAAATTCACACATCACATCATGTG GATCACTCAGCAGCCGACAGACATCAATCGAGCGCTTAGCTCAAGATTTA ACTAAATCCACCTATGACAATACTTCAACTGCCCAACTTCTACAGTCGTT GTCAGTTCTTCAGGGTGAGAGATCGGACATTCCTGCTATGAGGAAAGACA TCGATTCTCTAAAACGCTCAGTCGATAGCACGCACACCATCTTGAAACAT TTGTGCGTTGTGGTGATGGAGGGGAACAAATCATCCGGTGCTGAACCACC ATCGGCGCCCAATGGCGTTCCCTTTGAAGAACACAAGAGGGTGGTGTCGG AAAAAGACGTCCAAATCCAGCGAATTAAACAACATGCTGAGACTATGGTA AGTTTTTTTGATTCCTTAAATTTTCAATAAGATCACATCGAGAATAACAA TAATTATTCTTTTTTGGTATTCTATCATTTTACTATACTAGTGCTTTAGA AGCTGTCAACTTATAATTATATTTGAAGCGTCCCCTCACTTGTAGCACAA TGAGCCTTCGTTACCCAAAGAAGATTTTGAAGCTTAGAAGTGGTATTCAG TTTCTGTGTTATTTCCATACTCAGCTCACTACTTAAATTAAAATACATTG ATAGAACAAGGAAGTCTTTTGTTGGGCTTGCCGTGGTAAAGTGGTAGTCT CCCTTGGCTTCTGTGCAGGAGGCCAGGGTTCGATTCCCACTCGAGGCAGT TCACTTGGCAAGTGAACGTTCCTTTGCCCGGGTCAACCCATGCCATGTGA GAGGAATTGGGTAGTCAGTTCAAAGTGCTGACGGGACGCTCATTAGTAAG CGTCTATCGTTCCGAGAATAGGCCTCTAAAGCTTCCTGCAACCTCAACCG AATAGAAATAGAAATTGTTTTCGTTATTTCTCAGTCCTGTAGATTAGTGT AAATGTACACGGCGCAGTAGTGTATGTAGATATAAAACTAGATTGTCGTC CGGGATTCTTACTCGAGAGGGTTGTGCTCACTTGGCAAGTGAAAGTAACT TCGCCCGTGTCAACCCGTGTCATGTGATAGGAAATTGGGTAAACAGAAAC TCAAGTAACCTTTCTGGATCGATCACATAAAACCTGTTGATAATGTTGCG AATTTGCTAAAATTCGCGAAATTAAATGGTCGTAAAAAAAATGAATATTG TTGATTTGCAAAATTAAATTCCGGCGAAATAAAAAAAATTTCGCGAATGG CCTGACTCGTGCAATCTAGTTTTACTAGATATTTAAAAGCACTCTTGTCT CCCGAATAGACGGAGGGGGGTCCGAATAAGCAGGGGGTAGGAAAATTTTC TAAATTCTAATAAGTGGGGGGGGGGAGACAAAAATTCATCTATTCGGGAG ACAAGAGTAGCATTAACTTTTTTTAAATTGATAGTTTTTTTCTCAAAATC AGGAATACTGTTTAATAACGTGACTTCCTTAGTAGGAAAATTGCATTGCA CTTTTCTAGTCAATCAGGCATTATCAACATTAAATCAAAGTCAGTTTATT TGAAATATTATTCGAATTACTTTTTCAAACCTACTGCTCAAAATTCAAGT TAGAGCATCCTCTAAACAATCCTGAAAAAATCCTCGACAAACCTGTATAC TTTTTTTTTTGGTGCACCCGGTATATTTTTTAACTCTTAGTGTTTCGAGC ACTCTAGTGGCAACACGCTCGCTTACCGCGGCCTGATATGTCCTGGGCAG GAACACGTGTCCGCGGAAAGATGAAACACAAATGTAGGAGTGCTCTTGTG AAAAATTTAAAATACCCTTACATTGAAGCGATAAAGTAACTTCAATATAG TTAAGCCATACGAATGCTAAAAATAGTTTGCACTCTACCGCAAAGACTCG GGAAATGCCTCTAGAGTTTTGGCTGGAATTTGCTTAGTTTGATTTAGTAA TAGACTAAAAATGCCGTGCACCGAGAGCAAATCTTCCTTGTAAATTAATT TCCAGTCCTTTAAAGAGCCGATCGCTCCGCTAAGGTCTGATATGCATTAT GTTACATTCTTTTATAGTTCGACGAGTATCGATGCCACATCGAGAAACTC AAGGATGAAAAGGCATTATTGGCTGGCGAAGTGATAAGCCTTAAAACAAC AATGTCTAATGTCTTTACGGCTGAGATAGAAGCGAGGAATCTAACCATCG CCTCACAATCACAACACATTGATAAGTTGAGCACGGAATGCTCGAAATTG ATTTTCTTATTGGAGGAAGCTAAACACCAGTTAAGAGAGAAAGCGCTTGT CAAAAGGTATGCGATTCTTTTTTGACTCGATTAATTCTTGTCGAACATAA ACAAGGTTATTTCACAATTGCAAACCGTAATGGGTAATCAGGACCACTGC GCNTCGCTTGTCAAAAGGTATGTGATTCTTTTTTGAACTCGTTAACATCT AAGTCTACCATTATGACTTGACTCGATTAATTGTTGTCGAATAAAAACGA CCTTCCAAAGGTTATTTCACTATCGCAAACTGTAATGGGTAATCAGGACC ACTGCGCGCTAATGACGACTTACTATTGGTCCAAAATTTTGAAATATTTT GAAGATTTTTGCGTCTAGCTAACAGTAAGTGGTTATTAGAGCGTAACCAG TCCTGATTGCCAATTCATTTCGACTGTGAGATGCANTCGTAAGTGGTTAT TAGAGTGTAACCAGTCCTGATTGCCAATTCATTTCGACTGTGAAATGCAT CTATTCAGTTGAGTTTCAAAATTAGATTAAACAACAGTATAAATTGCAAC GTTGCGAACTAAAATCTAGAAAATAATACCTCATCAGGGGAAAAAAGTCG AGGAAAATAATTAACGAAAACTTTAAAAGGGTGACGAAATTTCCCCCGTA CAAAAAATTCCCCGATATATCATCAGCCGACAAAGCTTTTTTTAGATTAT TATCCATTTCTTATTATCACTAAATTGTTTTACGCCTTCACCGGAATTGG GATTTTAAAAATCGATATAAGAAGATTTATTTTCGGGATAGTGAAATATT TGTTTTGTAGAGTTTAGTCCGATTGAGTGACTAAATTGTAAATTTTTGAA TTGTGACGAGTTTAACATTTTGGTCTAGGAAAAGCGACAAAATTAGAATT AAAGGTTTTCTACGGGAATAAAAGGACCATATTTTAGGCAGTGTCTTCAT GCTAAATCAGATAAATTAAACTACTTTTTTATGCAACGATATCCTGCAAA ACTCACATTCTAGTGCTTTTGTAAACAAAAAAATAGCAAAGTTGATTTCG AGCAAATTTACAATCGAATGTTTTGATTATAAGATAGAAAACGTTCTATT TATTATAAACATAAAAACAGTCGAAAGAGTATCAGTAAAAGTCCCTTTGC TTGAGGAATGTTTTTTTACTCGATGTATTTTCATTATTTCAAAAAAAAAT CTAATCTTTTGGCACTTGTTTTTCTACGTCAGCATCATCAGACCTTTAAA TCAAAACAAAACCTTTAAGGGACGAATTTTTCCCCGTCAATTTTTTCCCT TACTAATTAGAACCCAAACGTTTTCCCCGGTAGAGTAAGTGGGTTTATCT TTTGTTTTAAATGACAAGGTTCGTTATCTTTTCCTTTGTAGCAAGATGTC TGGAACTTTTCCATCCTCCGCTAGTCAACAGACACAAACTGAACACGTTG AACACGTATCATCAGTTAGTGATGTCCAGCAAACCAAATCTGCCCACATG GAGGACGTATCATCAGTCTGTGATGTGGAACGAACCAAATCTGCCCACAT GGAGAACGTAGCACCAGTCTGTGATGTGGAGCAAACTAAATCTGCCCATA TGAAGGACGTAGCACCAGTCTGTGATGTGGAAGAAACCAAATCTGCCCAC ATGGAGGACGTATCATCAGTCTGTGATGTGGAGCAAACCAAATCTGCCCA CATGAAGGACGTAGCACCAGTCTGTGATGTGGAGCAAACCAAATCTACCC ACATGGAGCACGTATCATCAGTTAGTGATATGGAGCAAACCAAATCTGCC CACATGGAGGATGTAGCACCAGTCTGTGATGCCCAGCAAACCAAATCTGC CCACATGGAGGACGTAGCACCAGTCTGTGATGTGGAGCAAACCAAATCTG CCCACATGGAGGACGTATCATCAGTTAGTGATGTGGAAGAAACCAAATCT GCCCACATGGAGGACGTAGCACCAGTCTGTGATGTGGAGCAAACCAAATC TGCCCAAATGGAGCACGTAGCACCAGTCTGTGATGTGGAGCAAACCAAAT CTACCCACATGGAGGACGTAGCACCAGTCTGTAATGTCCAGCAGACCAAA TCTGCCCACATGAAGGACGTAGCACCAGTCTGTGATGCCCAGCAAACCAA ATCTGCCCACATGGAGGACGTATCATCAGTTAGTGATGTCCAGCAAACCA AATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGATGTGGAGCAAACC AAATCTGCCCACATGAAGGACGTAGCACCAGTCTGTGATGCCCAGCAAAC CAAATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGATGTGGAGCAAA CCAAATCTGCCCACATGAAGGACGTAGCACCAGTCTGTGATGCCCAGCAA ACCAAATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGATGTGGAGCA AACCAAATCTGGCCACATGGAGGACGTATCATCAGTTAGTGATGCCCAGC AAACCAAATCTGCCCACATGGAGGACGTTGCACCAGTCTGTGATGTGGAG CAAACCAAATCTGCCCACATGAAGAACGTAGCACCAGTCTGTGATGCCCA GCAAACCAAATCTGCCCACATGGAGGACGTATCATCAGTTAGTGATGCCC AGCAAACCAAATCTGCCCACATGGAGGACGTTGCACCAGTCTGTGATGTG GAGCAAACCAAATCTGCCCACATGAAGAACGTAGCACCAGTCTGTGATGC CCAGCAAACCAAATCTGCCCACATGGAGGACGTAGCACTAGTCTGTGATG TGGAGCAAACCAAATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGAT GTGGAGCAAACCAAATCTGCCCACATAGAGCACGTAGCATCAATTAGTGA TATCGAAAAGACACAACCTGACCATTTGAGTGACTCTCCCTCTAATGACA CTAATGCCCAGACTGGGTCGTCATCCAACAAAGATACCGTCGAATCTGCA CGGCAAAATCAGAAACCACGTCGTACCATGTGGTATACATTATTGAATGA TTTTTTTGAAAGATTCTACTAAAATCAAAGTTTTCAAAAGCAATTGTATC GAAATGTGAAGAAAGGAACGAAAAAAATTTGTTTCTATATTCTATTCTCT CTGAAGATCATCAATTAAGTAAAAGAAACTAGCAGAGAAACAGAACAATT CATGTCCTTTGGACCTTATGCTTATATTATTGCTCGACTCATTAAATATC TCATCGGGAAAAGGTGGACAGGACTTTTGAAACTAACAGCATCTTATCCG CCCAAAGCCTCAAAAGTTTTGGCCTCCTTGCTGTTGGCATAATTAAGTAG CCTCCAATATGAAGAGCATGAGATTCAAAGTGTATGAATATATCCTGATC CCTGCTAATGGCTTTTGCCTTTTTGATGATACCACAGTGAGTTAGAATAT CGAAACAAAGTTTCTTTGTTTATTTCTTTGCATATTGATACGATTGCTGT GTATATTGTACATAATTTTTCTTGTCATATCCGC

Coding sequence (CDS) from alignment at sc0000252:100887..107020-

>TCONS_00016807 ID=TCONS_00016807|Name=TCONS_00016807|organism=Clytia hemisphaerica|type=CDS|length=7488bp|location=Sequence derived from alignment at sc0000252:100887..107020- (Clytia hemisphaerica)
CAAGATGTCTGGAACTTTTCCATCCTCCGCTAGTCAACAGACACAAACTG
AACACGTTGAACACGTATCATCAGTTAGTGATGTCCAGCAAACCAAATCT
GCCCACATGGAGGACGTATCATCAGTCTGTGATGTGGAACGAACCAAATC
TGCCCACATGGAGAACGTAGCACCAGTCTGTGATGTGGAGCAAACTAAAT
CTGCCCATATGAAGGACGTAGCACCAGTCTGTGATGTGGAAGAAACCAAA
TCTGCCCACATGGAGGACGTATCATCAGTCTGTGATGTGGAGCAAACCAA
ATCTGCCCACATGAAGGACGTAGCACCAGTCTGTGATGTGGAGCAAACCA
AATCTACCCACATGGAGCACGTATCATCAGTTAGTGATATGGAGCAAACC
AAATCTGCCCACATGGAGGATGTAGCACCAGTCTGTGATGCCCAGCAAAC
CAAATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGATGTGGAGCAAA
CCAAATCTGCCCACATGGAGGACGTATCATCAGTTAGTGATGTGGAAGAA
ACCAAATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGATGTGGAGCA
AACCAAATCTGCCCAAATGGAGCACGTAGCACCAGTCTGTGATGTGGAGC
AAACCAAATCTACCCACATGGAGGACGTAGCACCAGTCTGTAATGTCCAG
CAGACCAAATCTGCCCACATGAAGGACGTAGCACCAGTCTGTGATGCCCA
GCAAACCAAATCTGCCCACATGGAGGACGTATCATCAGTTAGTGATGTCC
AGCAAACCAAATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGATGTG
GAGCAAACCAAATCTGCCCACATGAAGGACGTAGCACCAGTCTGTGATGC
CCAGCAAACCAAATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGATG
TGGAGCAAACCAAATCTGCCCACATGAAGGACGTAGCACCAGTCTGTGAT
GCCCAGCAAACCAAATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGA
TGTGGAGCAAACCAAATCTGGCCACATGGAGGACGTATCATCAGTTAGTG
ATGCCCAGCAAACCAAATCTGCCCACATGGAGGACGTTGCACCAGTCTGT
GATGTGGAGCAAACCAAATCTGCCCACATGAAGAACGTAGCACCAGTCTG
TGATGCCCAGCAAACCAAATCTGCCCACATGGAGGACGTATCATCAGTTA
GTGATGCCCAGCAAACCAAATCTGCCCACATGGAGGACGTTGCACCAGTC
TGTGATGTGGAGCAAACCAAATCTGCCCACATGAAGAACGTAGCACCAGT
CTGTGATGCCCAGCAAACCAAATCTGCCCACATGGAGGACGTAGCACTAG
TCTGTGATGTGGAGCAAACCAAATCTGCCCACATGGAGGACGTAGCACCA
GTCTGTGATGTGGAGCAAACCAAATCTGCCCACATAGAGCACGTAGCATC
AATTAGTGATATCGAAAAGACACAACCTGACCATTTGAGTGACTCTCCCT
CTAATGACACTAATGCCCAGACTGGGTCGTCATCCAACAAAGATACCGTC
GAATCTGCACGGCAAAATCAGAAACCACGTCGTACCATGTGGTATACATT
ATTGAATGATTTTTTTGAAAGATTCTACTAATTCGACGAGTATCGATGCC
ACATCGAGAAACTCAAGGATGAAAAGGCATTATTGGCTGGCGAAGTGATA
AGCCTTAAAACAACAATGTCTAATGTCTTTACGGCTGAGATAGAAGCGAG
GAATCTAACCATCGCCTCACAATCACAACACATTGATAAGTTGAGCACGG
AATGCTCGAAATTGATTTTCTTATTGGAGGAAGCTAAACACCAGTTAAGA
GAGAAAGCGCTTGTCAAAAGATGTCTGGTCTCTCCACTCACAAAACCAGC
TCAGCGGGTAAATATGACACTGAACAACACCCGCAAGGGCTGAAGACCAA
CAAACAAAAACTGATGGATGCTTCCCGCAGTGTCATCAACATGGATTCTG
GCATCAGTCCAAACCAACACGAAATCATATTACGACACCTGGAGAAACTC
GAGAAGAGCTCCCAAGGGAACATTCCAAATTCACACATCACATCATGTGG
ATCACTCAGCAGCCGACAGACATCAATCGAGCGCTTAGCTCAAGATTTAA
CTAAATCCACCTATGACAATACTTCAACTGCCCAACTTCTACAGTCGTTG
TCAGTTCTTCAGGGTGAGAGATCGGACATTCCTGCTATGAGGAAAGACAT
CGATTCTCTAAAACGCTCAGTCGATAGCACGCACACCATCTTGAAACATT
TGTGCGTTGTGGTGATGGAGGGGAACAAATCATCCGGTGCTGAACCACCA
TCGGCGCCCAATGGCGTTCCCTTTGAAGAACACAAGAGGGTGGTGTCGGA
AAAAGACGTCCAAATCCAGCGAATTAAACAACATGCTGAGACTATGCAAG
ATGTCTGGAACTTTTCCATCCTCCGCTAGTCAACAGACACAAACTGAACA
CGTTGAACACGTATCATCAGTTAGTGATGTCCAGCAAACCAAATCTGCCC
ACATGGAGGACGTATCATCAGTCTGTGATGTGGAACGAACCAAATCTGCC
CACATGGAGAACGTAGCACCAGTCTGTGATGTGGAGCAAACTAAATCTGC
CCATATGAAGGACGTAGCACCAGTCTGTGATGTGGAAGAAACCAAATCTG
CCCACATGGAGGACGTATCATCAGTCTGTGATGTGGAGCAAACCAAATCT
GCCCACATGAAGGACGTAGCACCAGTCTGTGATGTGGAGCAAACCAAATC
TACCCACATGGAGCACGTATCATCAGTTAGTGATATGGAGCAAACCAAAT
CTGCCCACATGGAGGATGTAGCACCAGTCTGTGATGCCCAGCAAACCAAA
TCTGCCCACATGGAGGACGTAGCACCAGTCTGTGATGTGGAGCAAACCAA
ATCTGCCCACATGGAGGACGTATCATCAGTTAGTGATGTGGAAGAAACCA
AATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGATGTGGAGCAAACC
AAATCTGCCCAAATGGAGCACGTAGCACCAGTCTGTGATGTGGAGCAAAC
CAAATCTACCCACATGGAGGACGTAGCACCAGTCTGTAATGTCCAGCAGA
CCAAATCTGCCCACATGAAGGACGTAGCACCAGTCTGTGATGCCCAGCAA
ACCAAATCTGCCCACATGGAGGACGTATCATCAGTTAGTGATGTCCAGCA
AACCAAATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGATGTGGAGC
AAACCAAATCTGCCCACATGAAGGACGTAGCACCAGTCTGTGATGCCCAG
CAAACCAAATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGATGTGGA
GCAAACCAAATCTGCCCACATGAAGGACGTAGCACCAGTCTGTGATGCCC
AGCAAACCAAATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGATGTG
GAGCAAACCAAATCTGGCCACATGGAGGACGTATCATCAGTTAGTGATGC
CCAGCAAACCAAATCTGCCCACATGGAGGACGTTGCACCAGTCTGTGATG
TGGAGCAAACCAAATCTGCCCACATGAAGAACGTAGCACCAGTCTGTGAT
GCCCAGCAAACCAAATCTGCCCACATGGAGGACGTATCATCAGTTAGTGA
TGCCCAGCAAACCAAATCTGCCCACATGGAGGACGTTGCACCAGTCTGTG
ATGTGGAGCAAACCAAATCTGCCCACATGAAGAACGTAGCACCAGTCTGT
GATGCCCAGCAAACCAAATCTGCCCACATGGAGGACGTAGCACTAGTCTG
TGATGTGGAGCAAACCAAATCTGCCCACATGGAGGACGTAGCACCAGTCT
GTGATGTGGAGCAAACCAAATCTGCCCACATAGAGCACGTAGCATCAATT
AGTGATATCGAAAAGACACAACCTGACCATTTGAGTGACTCTCCCTCTAA
TGACACTAATGCCCAGACTGGGTCGTCATCCAACAAAGATACCGTCGAAT
CTGCACGGCAAAATCAGAAACCACGTCGTACCATGTGGTATACATTATTG
AATGATTTTTTTGAAAGATTCTACTAATTCGACGAGTATCGATGCCACAT
CGAGAAACTCAAGGATGAAAAGGCATTATTGGCTGGCGAAGTGATAAGCC
TTAAAACAACAATGTCTAATGTCTTTACGGCTGAGATAGAAGCGAGGAAT
CTAACCATCGCCTCACAATCACAACACATTGATAAGTTGAGCACGGAATG
CTCGAAATTGATTTTCTTATTGGAGGAAGCTAAACACCAGTTAAGAGAGA
AAGCGCTTGTCAAAAGATGTCTGGTCTCTCCACTCACAAAACCAGCTCAG
CGGGTAAATATGACACTGAACAACACCCGCAAGGGCTGAAGACCAACAAA
CAAAAACTGATGGATGCTTCCCGCAGTGTCATCAACATGGATTCTGGCAT
CAGTCCAAACCAACACGAAATCATATTACGACACCTGGAGAAACTCGAGA
AGAGCTCCCAAGGGAACATTCCAAATTCACACATCACATCATGTGGATCA
CTCAGCAGCCGACAGACATCAATCGAGCGCTTAGCTCAAGATTTAACTAA
ATCCACCTATGACAATACTTCAACTGCCCAACTTCTACAGTCGTTGTCAG
TTCTTCAGGGTGAGAGATCGGACATTCCTGCTATGAGGAAAGACATCGAT
TCTCTAAAACGCTCAGTCGATAGCACGCACACCATCTTGAAACATTTGTG
CGTTGTGGTGATGGAGGGGAACAAATCATCCGGTGCTGAACCACCATCGG
CGCCCAATGGCGTTCCCTTTGAAGAACACAAGAGGGTGGTGTCGGAAAAA
GACGTCCAAATCCAGCGAATTAAACAACATGCTGAGACTATGCAAGATGT
CTGGAACTTTTCCATCCTCCGCTAGTCAACAGACACAAACTGAACACGTT
GAACACGTATCATCAGTTAGTGATGTCCAGCAAACCAAATCTGCCCACAT
GGAGGACGTATCATCAGTCTGTGATGTGGAACGAACCAAATCTGCCCACA
TGGAGAACGTAGCACCAGTCTGTGATGTGGAGCAAACTAAATCTGCCCAT
ATGAAGGACGTAGCACCAGTCTGTGATGTGGAAGAAACCAAATCTGCCCA
CATGGAGGACGTATCATCAGTCTGTGATGTGGAGCAAACCAAATCTGCCC
ACATGAAGGACGTAGCACCAGTCTGTGATGTGGAGCAAACCAAATCTACC
CACATGGAGCACGTATCATCAGTTAGTGATATGGAGCAAACCAAATCTGC
CCACATGGAGGATGTAGCACCAGTCTGTGATGCCCAGCAAACCAAATCTG
CCCACATGGAGGACGTAGCACCAGTCTGTGATGTGGAGCAAACCAAATCT
GCCCACATGGAGGACGTATCATCAGTTAGTGATGTGGAAGAAACCAAATC
TGCCCACATGGAGGACGTAGCACCAGTCTGTGATGTGGAGCAAACCAAAT
CTGCCCAAATGGAGCACGTAGCACCAGTCTGTGATGTGGAGCAAACCAAA
TCTACCCACATGGAGGACGTAGCACCAGTCTGTAATGTCCAGCAGACCAA
ATCTGCCCACATGAAGGACGTAGCACCAGTCTGTGATGCCCAGCAAACCA
AATCTGCCCACATGGAGGACGTATCATCAGTTAGTGATGTCCAGCAAACC
AAATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGATGTGGAGCAAAC
CAAATCTGCCCACATGAAGGACGTAGCACCAGTCTGTGATGCCCAGCAAA
CCAAATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGATGTGGAGCAA
ACCAAATCTGCCCACATGAAGGACGTAGCACCAGTCTGTGATGCCCAGCA
AACCAAATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGATGTGGAGC
AAACCAAATCTGGCCACATGGAGGACGTATCATCAGTTAGTGATGCCCAG
CAAACCAAATCTGCCCACATGGAGGACGTTGCACCAGTCTGTGATGTGGA
GCAAACCAAATCTGCCCACATGAAGAACGTAGCACCAGTCTGTGATGCCC
AGCAAACCAAATCTGCCCACATGGAGGACGTATCATCAGTTAGTGATGCC
CAGCAAACCAAATCTGCCCACATGGAGGACGTTGCACCAGTCTGTGATGT
GGAGCAAACCAAATCTGCCCACATGAAGAACGTAGCACCAGTCTGTGATG
CCCAGCAAACCAAATCTGCCCACATGGAGGACGTAGCACTAGTCTGTGAT
GTGGAGCAAACCAAATCTGCCCACATGGAGGACGTAGCACCAGTCTGTGA
TGTGGAGCAAACCAAATCTGCCCACATAGAGCACGTAGCATCAATTAGTG
ATATCGAAAAGACACAACCTGACCATTTGAGTGACTCTCCCTCTAATGAC
ACTAATGCCCAGACTGGGTCGTCATCCAACAAAGATACCGTCGAATCTGC
ACGGCAAAATCAGAAACCACGTCGTACCATGTGGTATACATTATTGAATG
ATTTTTTTGAAAGATTCTACTAATTCGACGAGTATCGATGCCACATCGAG
AAACTCAAGGATGAAAAGGCATTATTGGCTGGCGAAGTGATAAGCCTTAA
AACAACAATGTCTAATGTCTTTACGGCTGAGATAGAAGCGAGGAATCTAA
CCATCGCCTCACAATCACAACACATTGATAAGTTGAGCACGGAATGCTCG
AAATTGATTTTCTTATTGGAGGAAGCTAAACACCAGTTAAGAGAGAAAGC
GCTTGTCAAAAGATGTCTGGTCTCTCCACTCACAAAACCAGCTCAGCGGG
TAAATATGACACTGAACAACACCCGCAAGGGCTGAAGACCAACAAACAAA
AACTGATGGATGCTTCCCGCAGTGTCATCAACATGGATTCTGGCATCAGT
CCAAACCAACACGAAATCATATTACGACACCTGGAGAAACTCGAGAAGAG
CTCCCAAGGGAACATTCCAAATTCACACATCACATCATGTGGATCACTCA
GCAGCCGACAGACATCAATCGAGCGCTTAGCTCAAGATTTAACTAAATCC
ACCTATGACAATACTTCAACTGCCCAACTTCTACAGTCGTTGTCAGTTCT
TCAGGGTGAGAGATCGGACATTCCTGCTATGAGGAAAGACATCGATTCTC
TAAAACGCTCAGTCGATAGCACGCACACCATCTTGAAACATTTGTGCGTT
GTGGTGATGGAGGGGAACAAATCATCCGGTGCTGAACCACCATCGGCGCC
CAATGGCGTTCCCTTTGAAGAACACAAGAGGGTGGTGTCGGAAAAAGACG
TCCAAATCCAGCGAATTAAACAACATGCTGAGACTATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009406XLOC_009406Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016807-proteinTCONS_00016807-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016807-exon-sc0000252-1575043694:106274..107020TCONS_00016807-exon-sc0000252-1575043694:106274..107020Clytia hemisphaericaexon
TCONS_00016807-exon-sc0000252-1575043694:104365..104603TCONS_00016807-exon-sc0000252-1575043694:104365..104603Clytia hemisphaericaexon
TCONS_00016807-exon-sc0000252-1575043694:100887..103029TCONS_00016807-exon-sc0000252-1575043694:100887..103029Clytia hemisphaericaexon
TCONS_00016807-exon-sc0000252-1510915933:106274..107020TCONS_00016807-exon-sc0000252-1510915933:106274..107020Clytia hemisphaericaexon
TCONS_00016807-exon-sc0000252-1510915933:104365..104603TCONS_00016807-exon-sc0000252-1510915933:104365..104603Clytia hemisphaericaexon
TCONS_00016807-exon-sc0000252-1510915933:100887..103029TCONS_00016807-exon-sc0000252-1510915933:100887..103029Clytia hemisphaericaexon
TCONS_00016807-exon-sc0000252-1491911889:106274..107020TCONS_00016807-exon-sc0000252-1491911889:106274..107020Clytia hemisphaericaexon
TCONS_00016807-exon-sc0000252-1491911889:104365..104603TCONS_00016807-exon-sc0000252-1491911889:104365..104603Clytia hemisphaericaexon
TCONS_00016807-exon-sc0000252-1491911889:100887..103029TCONS_00016807-exon-sc0000252-1491911889:100887..103029Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000252supercontigsc0000252:100887..107020 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.271642 0.155667 0.507596 0.272768 0.632203 0.554741 0.724924 0.893511 0.223846 0.414065 0.0984759 0.205998 0.0856852 0.149544 0.200075 0.284775 0.192631 0.273694 0.0904094 0.0946069 0.176208 0.120328 0.0531971 0.202643 0.437208 0.756743 0.199919 0.177799 0.202282 0.250265
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016807 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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