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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016759 ID=TCONS_00016759|Name=TCONS_00016759|organism=Clytia hemisphaerica|type=transcript|length=1101bp
TGACTTTAAGAGTTTGATGATATGAGATGCAGGCTACTAATTAATTTCTT
CTTTATCCCTTTTTAGTAGGAGCTCGTTTGATTATTTTGTATTATGGACC
CATAAATAAACTGTATTTCAAAGAGTACTGTACATATGATTAGTGCGTAA
GCACAGAACTCAGGTGATGTACTTTTGAGTTTTTAATGGAAGATAACCTT
TGAAATCTTGACATTTTAAAGAGTATAACGATTGATGGACTTAACATTGC
CAAAACGAAATTTTTACAGGAGTGTGATTATAAATGAATAAATACGTAGT
TTAGTTGGTTGGTCTTCATAATCGTAAtcagtttgaaaaattgatttttc
ctttCATTTTTCAGATACGCCCAAACAAAACGTTTCAGCTAAACGGTTAC
TGCTTTTGGTACGATAGAGAAACATAAATTCGATATGTCACCGGGTGCTC
ACTGTGGAATGAGATTTATGATTATTAAGCCAAATTCTGTTCATCATTCG
ACAAAAATGTAATGTCACGACATGGTTTTGGAACTTATAAACGCTTAAGA
AAATTGCATTCATCACGTTACATGCACTAACAAGAAGGATATTGGATGAG
GGTTATTTGATTAGAGGGACTTTATCAAACGCCATCTTTTAATGTGATGA
TACAATATATGTGATAGACTCCAATGGCTTGATGTACTATAACCAAATGA
AGGGACGATTTACGTCTGGTGAGCCGAGGAAAGTTGATATGCTTTATAAA
TTGAAATGCTttataaattgaaatttattttatttttaatgattGTATTC
TCAACTTCTGTGTTATTATTAAACTGGACTTATGTAGGTAGAAAGCGATG
AAAAATGGTCAAAGACTAGCACATTTTTGATTGGTGCTTGATTTGCTTTA
AATGCAAGGCTTGCATAGGAAAATACCGCTGGAAGACAAGCATATAAAGG
GCGTCAAATACTTCCTTTCTTCGAAGACTATTCTCTCTTACGGCTATATT
TCATTTGGTAGAGTTTCgatttttatattataaattattttatccAACAG
cagaagaaaaagaataaaCCTGAGCCCAAATCCTGGGAAAATGGAATACT
C Run BLAST on NCBI transcript from alignment at sc0000248:40261..41361 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016759 ID=TCONS_00016759|Name=TCONS_00016759|organism=Clytia hemisphaerica|type=transcript|length=1101bp|location=Sequence derived from alignment at sc0000248:40261..41361 (Clytia hemisphaerica)
GAGTATTCCATTTTCCCAGGATTTGGGCTCAGGtttattctttttcttct
gCTGTTggataaaataatttataatataaaaatcGAAACTCTACCAAATG
AAATATAGCCGTAAGAGAGAATAGTCTTCGAAGAAAGGAAGTATTTGACG
CCCTTTATATGCTTGTCTTCCAGCGGTATTTTCCTATGCAAGCCTTGCAT
TTAAAGCAAATCAAGCACCAATCAAAAATGTGCTAGTCTTTGACCATTTT
TCATCGCTTTCTACCTACATAAGTCCAGTTTAATAATAACACAGAAGTTG
AGAATACaatcattaaaaataaaataaatttcaatttataaAGCATTTCA
ATTTATAAAGCATATCAACTTTCCTCGGCTCACCAGACGTAAATCGTCCC
TTCATTTGGTTATAGTACATCAAGCCATTGGAGTCTATCACATATATTGT
ATCATCACATTAAAAGATGGCGTTTGATAAAGTCCCTCTAATCAAATAAC
CCTCATCCAATATCCTTCTTGTTAGTGCATGTAACGTGATGAATGCAATT
TTCTTAAGCGTTTATAAGTTCCAAAACCATGTCGTGACATTACATTTTTG
TCGAATGATGAACAGAATTTGGCTTAATAATCATAAATCTCATTCCACAG
TGAGCACCCGGTGACATATCGAATTTATGTTTCTCTATCGTACCAAAAGC
AGTAACCGTTTAGCTGAAACGTTTTGTTTGGGCGTATCTGAAAAATGaaa
ggaaaaatcaatttttcaaactgaTTACGATTATGAAGACCAACCAACTA
AACTACGTATTTATTCATTTATAATCACACTCCTGTAAAAATTTCGTTTT
GGCAATGTTAAGTCCATCAATCGTTATACTCTTTAAAATGTCAAGATTTC
AAAGGTTATCTTCCATTAAAAACTCAAAAGTACATCACCTGAGTTCTGTG
CTTACGCACTAATCATATGTACAGTACTCTTTGAAATACAGTTTATTTAT
GGGTCCATAATACAAAATAATCAAACGAGCTCCTACTAAAAAGGGATAAA
GAAGAAATTAATTAGTAGCCTGCATCTCATATCATCAAACTCTTAAAGTC
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016759-exon-sc0000248-1491911889:40261..41361 | TCONS_00016759-exon-sc0000248-1491911889:40261..41361 | Clytia hemisphaerica | exon |
| TCONS_00016759-exon-sc0000248-1510915933:40261..41361 | TCONS_00016759-exon-sc0000248-1510915933:40261..41361 | Clytia hemisphaerica | exon |
| TCONS_00016759-exon-sc0000248-1575043694:40261..41361 | TCONS_00016759-exon-sc0000248-1575043694:40261..41361 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000248 | supercontig | sc0000248:40261..41361 . |
Blast
The following BLAST results are available for this feature:
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