TCONS_00016717 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016717
Unique NameTCONS_00016717
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2531

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016717 ID=TCONS_00016717|Name=TCONS_00016717|organism=Clytia hemisphaerica|type=transcript|length=2531bp
CTTTGAAATCCTCGGGACGAAAGCATCGGTCGATTTGAAGTTGTTCAAGT
ATTACGAGTTCCTTCCTCCATTTGATCCATCTTAATGATTGATCAGAGCT
TAACGGTTCATCCCATCCACATCGTTCGGAACAGATGAGTTGGAGAAGTT
TTTTGCCTTCGAGAAGATATGGTGATGTAAGTCCAAATGGATCGTAAACA
GAGCTGATGGACGATAGCAACCGTCTTCGTGTCAGTGGTTTCTCTTTGGT
TGAAAGCTGGACTATCTGCAACGTTATGGTTACATAGACAAGGCAACAGT
TGCAGCACAAACCATCAATATTAACGATGTCGATAAATTCAAATCAAtgc
tcaaatttcaaaacaagatgCAAATACAAGCAACAGGAACATACAACGAT
CAAACCCGTTGTTTTATGACGAAACCCCGATGTGGTGAAAAAGACATCAT
CGTTGATGGGGCGAACAAAATTGACAGTGATTTCTATATGAGGAAAGAGA
ACTTGACTTACTTCGTAGACACCTGGTCACCTCTGATGAATTGGCGACAA
CAAAATTATACCATTATAGCAGCCTTCTATTCACTGCGAAAAAATATTAC
CTCAAGAATTCATCTAGATTGGAAAAGATCACTTCCTGATATCCAAATAC
GATTTGTAAAAGATAACATGAAATCAAGCAATCCACAAAAGACTTGGCTA
CGACtggtcaaaaaatcaaaatcaatttatatGTATATCAGCTCTAACGA
AACTTCCAGTGAATACAGACTCTTTCAAGCTTTAAAGCATGGTTTCGGAC
ATATTTTGGGAATGGATCATCAACCGGACAGTTTCATGTCACCAGTCATG
AAACACGAACAACAGGATATCAAAAATTGTCGGAATGGTTTCACGAATCA
TTTCGTTCCTCCTGTCAAACCAATCAaGCCAGTATGTGGTGGTGacgata
aaatcaaaatcaaatcagccCACAATGAACCTAACGAACCAGACACATAC
TTTTTAGCCGGTGATCGGTACTGGAAAGTCACATCAAATGATTCTTACAT
GCAAAAACATAATCTATGTAGTCGAACGTACGAAGCTAACAGAATCGCTA
AAAACATGAGATGGCAGGAACAATTTCTGGTGGATATTGATGAAGGCTTT
AAACTACCTGTTGATAATTGGGATACCATTTTCTTTAAAGGTTCAGTGTT
CTGGCGCTACGAGTACGGCGCATGGGACGGACAAGCGGCTAAGAAAATCT
CCGACTACTGGATTGGCATCCCAGACAACATCGATACTGCTTTCATGAGT
CGTAGAATTAATAACAATGAAGATATTCTATTTTTCACCAAAGGTGACct
catttacaaatttgaaatcaatttaatCAAAGACGCTAATGGCATTGTTC
AAAAATATGGTAAAGTCAAAAGTGATTACCCGAAAAAGATAACAGCGGAA
TTCCCAAGATTACCGAATGATTTAGACACTGCTTACACTACGTATTGTGA
TTTTCgaagtttcttttttaaagacaatCATTATTGGGAGTGGGTTGATG
GTACTCCTGTTGTTAAAGGTCCTTATGAAATTCGAGATTTAGTGAATAGT
TTTTGTATGTAATAAAAACTGAGAGATGGACTGATGAAAATTCTCACAAT
GTGGCACATATTGCGATATCTAGGATACGGTTAAGCTGTCGAACGACGCG
ATCGAAAGGAACCAACATGGAAGAAAATGGAATACATCTTCTAGAGTACC
CTTTAAACGAGCAAAACTTTTGAGTTACAGCTGGACTGTATACTGTATCT
TAAATCGTaataaaaacgaagaaaaatgaaaaactttatgaatttttaaa
aatacaaatttcaatTATCAACCACTGCAGAGACGATAAAACGAAGTTTG
TTGCAAATTTATTGCAGTCTTTGAAGCAGTGAAAATAATAGATGTTGTTG
GATGTTAAATGTTTATGATCAAAACCCTGAACTTTATTTTGTCAACATTA
AAGATGCACACAGCGTCATATTTGGGATAAATGACTAGATTTGGTAAACT
AACGAACAAAATTGACCTTCAAACATTACATTAACTGGTGAAAAATGCGT
GTTAACTTTAagttttttagaacttttttaaacGATCAACTAACTTGACG
TGGCAGCTGGAATTTTAGTAAAGTTGTTACCAAATTTTATTGACCAAGTT
ATCTTTATCAAGGCtgaaataatgtttttattttgaaataaggaTTTTTA
ACCCCTAGTGGGGGCCCCTTAAGTGTTCTTGAAAGGTCAATACTAAAGTT
TAGGGAAAACCTAAAATCTGAAATGACTTTGAAACCTGTAAGATATTTCA
GGTAAAcgagaaaattgagaaaaaagtttgaaaaatcacaaaaaattatt
taattttttttttgtaatatatCACAAGTTTTATAATGATaaagtaattt
taatttatattataaaatttttgaaaaaatatactttaagattttttgag
cTGCGAATAAAaggaattattttcaaaaacg
Run BLAST on NCBI

transcript from alignment at sc0000248:134587..148558+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016717 ID=TCONS_00016717|Name=TCONS_00016717|organism=Clytia hemisphaerica|type=transcript|length=13972bp|location=Sequence derived from alignment at sc0000248:134587..148558+ (Clytia hemisphaerica)
CTTTGAAATCCTCGGGACGAAAGCATCGGTCGATTTGAAGTTGTTCAAGT
ATTACGAGTTCCTTCCTCCATTTGATCCATCTTAATGATTGATCAGAGCT
TAACGGTTCATCCCATCCACATCGTTCGGAACAGATGAGTTGGAGAAGTT
TTTTGCCTTCGAGAAGATATGGTGATGTAAGTCCAAATGGATCGTAAACA
GAGCTGATGGACGATAGCAACCGTCTTCGTGTCAGTGGTTTCTCTTTGGT
TGAAAGCTGGTAGGTGGAATCTAGCGTGGTTTTCACATAAACGTTAAAGT
AAAACCCATCGCTAGATTGCGAAAAAATTACAGCTTAAATAAAAAAAGGG
TTAAGTTCAATCCACCATTTCGAATACGGCACAAATCTTaaggtttcatt
ttttgttGCTCGAGAATAGTTGAAGTTTCTCCTCTAGCCCTGTCAGTGAT
TTAAACCCAATGCTTCAGTCTGACAAAAGAGGTTCATGTGTAGAATTACG
GTTACTTTATTGGTAGTATCCATTCCGAATCCGTAAAAaggttatctggc
acccagatgcagaagttgtcatccgacacgctaaagctctgacaattcag
aaaattttcaacatttggaaGGTTTAAATTACGGAATTTTGAAGACCATG
TCAAGGGTTTTGTAGCGGGATGCCTGGTTATCCAGTCCTCGTTTTCGAAG
ATGGGTGGGttcaactgaaatattttcagctttacgtgcaagggtagttg
aacccAACTGGGTATCTGGCACATCAGAGGCCGAATATCATTCACCTCCG
ATGgaaaattggcccgctcctttagagcttcagcgtgggtggccgccaat
ccaccatcggaatatcagatatgTAAAAAGGCGTCTCTAACTTTTAATGT
CTGTCTACTCTTAATGATAGAAAAAATGACGGGTTTTTCTTTGCTTCCTG
ATTTAAGTCCTGTTCATAAAAAACGAACATTAACCTTAACGACCTGTCAT
TGCATTACAAAAGGTATTTGCGCCTTAAGTCGTCGCTAAAGAATTTATAA
AATCTAAATTGAGTAACATCCGACTGAACACTCATATAGAAATTGAACAT
ATATTTTTGAATAAGCGTTTTGCGTGAAATTGGAGCgcagaaacaaaaaa
acagtttttctttcATCAAAAGATTTCTATTGTTTATACTGTTCTCACTT
ATCGATATTGCGTTCGATGGTATAACACTGAGTGCAAACGAGGCACTGGA
ATGACACGGTATTTTTTATTGGACATATTGACGaaggttttctttttcta
attcCAGACTCTCCAGACGATCAATGGAGTAaagtaatatttgaaaaaaa
aatattgcaatTTCCTATTATTTTTAAGTGGTATTCGCacactttgttgt
ttttgaaagtACTATTTGTACGAAAGTGTTGTTCTGTTATATTTGACAAC
TGTGTGAGTACAGGAATGGacgtaaaatttttaaaacgtagaatttattt
ttgttatcaatcatttttttctttaaattcgcAGATGcaataaattttaa
agaaattattttttgaaataattcacGAACGAAACAATTGGCATTGTTGA
TTATCATAAAACAAAAGACTATTGTTTTCTTGACACTCAGATTCGATTCT
TTAAAGAGACTATTCATTTTATTGAAATCATGCATTGTTATAATATGTTG
TCGTTTGTTTTGCTAATTGTTATGGTTAGTAACTGCTGGTCAATACCAAT
ACAGTCTTTCAGTAAGAAGACACATTCAACTTTAAAGTATCCGAAGGAAT
CTATAGTAAGTAATAGCCAATTCATTCTCGCAGTAGCGTTCTCAGGGGTG
TcggaaaatttgtgtaggagagcgcAATTTTGTTACGAAGTTATTATCTT
TTAATGTTATGAATAGATAGTTactttgtcataaaaatctgctctcctac
acaaattttccgACACCCCTGAGAACGCTACTGTTCTCGCTTCATTCTGA
CCTGACGATTGGTAGTGTAAGGGTGTCGATTACAGACTTGCACTGCAATG
GGTTGAGTAGTTCAGTACTAATGTGAGAATAAGTAAGTAATAAGTCTTTC
ACCAGATCCACCGAGAACTATCACAAAATCATACTTTACAGCCAGAAAAC
TACTCGCGGTGCGGTAAAATGATTCAAGAAGATATTTTCTCGTTGTTTTC
TACGAGCTTTTGTTTTTGGTTAagaatttttggcttaaaaGGAATGAATC
TTTATTGCAAATTCGTAATGCTTTAATTGGAATTATTTCATTAAAGGGCA
TCAGACTGGAAAAAAAATCGCTGTTTTATGTATAGTGTTTTTGCTTTGTC
ATAAGACCCGCAAAATGGTCAAACGAGATAAATGTGCTCAACTCAAGTCC
TCCCACTAACATAAAATATTAACCTTCGTTCAAAATCTACACTTTTTTAC
TGTGGAGTTGTAAATTGATCTACGTAACCTCTCGTTACCTTTGCTTgcct
tcaatttttcttttttcgctTAACCAATTTTGATGTGACTGATATCCTCA
TTTTCTGAAGGTCTAAGCCACTTAATTGTCTTTCGTCATTAGCATCATGT
TTACTTATTCTTACGTAATcaagaaaaggtctattggctTGATTACTAAG
ATGTTAAATCTCTATCATTTAGTGACAAATAGTATCATCATAAAACTATG
AGTGTAATCAATGATGTCTGTATGTGATTTCTGAttagttttattttgtt
tcaaatgtcactttaatttaATGATAAATTTTGCTAGTATAAAGCTGTGA
AACTTTgcatttttgtttcaattttatgACTTCTTTGGGATTGCAATTGC
AATGaagaagggggggggtcaaaacttgcgaaaacattttaaggattaCA
TCAATTCCGCAAACCTTTTCGACATTAAATATCACAAAAACATCGATTTA
AATTGATGGTTTTCCTACTTCTAGTCGACAATTTTACTTCAAGTTTTGCG
CGTTTACTATTAGCTTCATAGACTCTTATAAGaatcattcaaattttctt
tcaataattGAGGGTCCTAAACAGTGTTGGaatcacttttttttcaaaat
aaaattatttttatgtaTCATTTTACATAATAGAAAGGCTGGGGGTGGAG
CCCCAAGGATTGAAATGCGATCTTAAGAAAATAATACTCGAAATAAATGA
CATTTTGTGAATTCAATCCCTAAAAAGTTGCTAATAAGTTGCTAATTTTT
AAAATGGCAGTACACTTTTGCAATATGCTGCAATTAATTTATATTAATTA
Atgattaaagtctattcacgataagtgtgcgctcttttttcttttaccta
taatctttgaaaatattctaaaaatgaagatgaaaataaagacagTAATT
Cagagtgatgacctcctaagatcaaagaatctctccagtgaaaatgaaag
ttatagcacttttctacaagatcttcatttttttcttccttattttcatc
ttcgtttttagaactttttaaaagactttttatttcaaattgtttcactc
acaaatatctctccaacgatatcaaatttaaaaagattgaagaatttctt
caaaagttataggtcaaagaaaaaagagtgcacactgaACAGACTTTACC
CAGCTCACACACAACGTTCTTTAAACGttaatataacgttatatggacgt
cgtgaacgttagataaacgttgaaacaacgttgtgtgcctgctGGGTAAT
TGGTTCTTATTGAGAATAAGTCATATCTTCATActgatgaatatttttct
gatgGTATTTAGTGAATAAAGTTTTTCGTGGGCCTTTTCGATTCAATATT
TTCTAACCTTTAATTATGTTTATCTACGCTTTTTGGTTCATATTTTGGTC
TCTATCATAGATACCAACCATATGAATAGGTGGTGCCAGGCAACTGGAAT
AGGGATATTAAAGTTAACCTCAACTCAATAACGGAAATCAATTGACGTAT
TAAAAATTACCACTCCGCCTAATTCCGGTCTAAAAGACTCAAGATGGGGC
GTTAGTCTCTAATAAATGAGATGCTTAGTGTCAGTAACCAGACATTCGTC
CCAGTCTCTTTCCTGTCAAATTGTCAAGTACTAAAATTGCTAGACTATTT
GCTTTCTCAACCATATaagtatttattcaaaaaacaacaatttttttgcG
TAATTTTTGCGTGTATGGATTTCAGCGATTtgcaagaaaaataataattt
ccaTTGAAGGATGTCCAAAAATAATGTATCTCGTGCGGTTGGTGGTCTCT
CATATTTTGGAAAAGTATCTCTTTGTGAATTTTAGCAGGCAATAAAGTAT
GATTGTGATGTCATGAAGCCTGCTAGTTCTCGTTTACAAAATAGTCTAAG
CTTAGAATAGACCACACCGCCGCTCTACCTTATTTTGACCTAGATTTCTT
TGACACCTAACTTCCAGTTTGTACCCGGGAGAGGGGGTATTTACGGTACG
AACGGAAAGGTttggttttttcacctttcaaagtctctctaagggttgca
aaaatcagaaaattgtaaaaaagtctaaGGGTAAGacacttttatcaaaa
atcagtCTCTTCAAGGGTCGgctttcggaggtcccgtccggaCATACCCC
TTATCCgtcaaccctagtaccccccccccccgNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNccccccccccgggaatgcGTATTGTGTCTGTC
AACCAGAGGAGTTACTGGCAAATTCTTACATTGAGATATACATCAAAATA
AACTCAGACgtttaaaaatgtttgatttcaATTGCTAAAACCCTGGATGA
gacaaatttgttttcaacaAGAAATTAGGCCATACAATTAAGTCATATAT
GAAATATTACCATAGACGCTTTTTATAAGAGTTAAAGATTTAGGGGAAAG
ATTTTGATCTGATCTCGACTCTTTTTATGTCTTTTAGTGAGGCTTGATTA
AAGTACACATTGTCTGGACATCCCAGATCTCGAAACCGACCTTATTGAAA
GCGAGTGGTTGTAATCTTAAGGAGCGATTTTGTTTACTAGAAATCACAAT
CTGAAAGGTTCTCAGGAAAACAATACGTCAAGCCCCGTCAAGTCCTTGAA
GTATTGTTTGGTCAAAAAAAAGAATGCAATGATATGTCGACCATTTCAAG
TAGGTGTACTTGAAGGCTTTCATTGCAAGCGTAGGACACAGAAGTTGAAA
TTGCAAGAAATTGTTTTCGTATAAGCATTTGTATTGAATCTACAATGTGC
TACTAGAATATACTAATTCAAAGTTCTGATACGATCTATTGGACTCACAT
GTTCGGTGAAAATCTGTAACGGGAATACTAGTTCAGAgcgtaattgtaaa
attagaCTGTTTGTTTGCCATTATGATTCCTATTCGAGGAAATTGGTAAA
TGCTACTTTTGAATAACTTCAAAAGATTCTAATAATTTTAGGCACTTGTG
GTTTTGCTCGCAAAAGAGTTGTCTGTGGATTTTTCGAAATAGCAtgaaaa
agcagaaaataaATCGGCGGAATTTTTGTTACCCAAAATACGGATTAATT
TTTTATGTGATTTGGTGTCTTTTTTATGTTCGATTCGCTGCCTCATTCAC
ACATTTGTCACACCTTCTTTCGGCAGTGTTTCAAGATTCCTAATATAGAT
TTCACGCTTACTAAATATGTAGATTTTTATAGGGCCATAAATCACCCGTT
TATTTTGAGACGATATCCCTGAAATAGTCTATTGCTAAGGGATTATGTAA
TTTAAAACCAAGGGAAGCATTTGTTTCTTTTAAACGATCGATCTTACcat
gaattatttttagttGACTTCGTCAAAAGTCACTTTAAAAACTCATCATT
AACTTAACGAGAGGAGTGGCGGAATTCGACGGATTTTCGGAAGTTAGGTC
CCCTCTTGTAGAATTGGGTAGTCTAAATCCCGAAAATAGCAACAATATAC
CTGAGCAATAGTAATAGACCTCAAAATTACccaataagtaatagttatcc
tATAATGTACAAGTAAAAGTGTAATAATTGActtatcgtcaacttgaaaa
atatcaacaaacttttctTTCTCCATTTGTGTctcttcttctttgttttg
tttttctcttccaatatttttcttttattttttattttgatgaaatcaac
atcaaaacattcgaaaaaagaatcGAACGGTCATcaaaaagattaaaaca
tttttttcataaactcttttgATAAGTTGTTGTNTCGAAAATAGCAACAA
TATACCTAAGCAATAGTAATAGACTTCAAAATTACccaataagtaatagt
tatcctATAATGTACGAGTAAAAGTGTAATAACTGACTTAtcatcaactt
gaaaaatatcaacaaacttttctTTCTCCATTTGTGTctcttcttctttg
ttttgtttttctcttccaatatttttcttttactttttattttgatgaaa
tcaacatcaaaacattggagaaaaaaaaatcgaacggtcatcaaaaagat
taaaacattcttttcataaactcttttgATAAGTTGTTGTGTATTGGAAA
TGAAGTGGGAACCTTTTTAATtataaaattgtacaaaatatgacctctcg
cttaccagaccccttttttgtgttcaaactggagtttttacaaggttttt
gATGATTCGGTTGGTCGTTGAATcttgagacaaaggattttattgttttt
ttctaaagaacgcgtcatctctattatttcaaatgaccaattagtgaagt
atcttataaaaactccagctcatccccttttttgaacgcggtcttgtatt
tgtacggtaTACAATATGAAAATCGTCTAGtgtacgcgtttttagccaat
aggattgctcatatttttcatgttgatgataaTAGTAAAATATTccgaaa
tttttgctgaaaattttgaatttcaaagaaatattcAATGGAGAAACTTg
gtttttcatttaaaatttagaCAATGGGAACTAGGGAAAATTGAGAAAAC
ACTAGAATCAAGTATCTCCTGAAACCAAGGAAAACAGCCTTGTTgaaatt
gaatgtcttttttaaagatattttgctTAACTTTACTTTGTAGGACTATC
TGCAACGTTATGGTTACATAGACAAGGCAACAGTTGCAGCACAAACCATC
AATATTAACGATGTCGATAAATTCAAATCAAtgctcaaatttcaaaacaa
gatgCAAATACAAGCAACAGGAACATACAACGATCAAACCCGTTGTTTTA
TGACGAAACCCCGATGTGGTGAAAAAGACATCATCGTTGATGGGGCGAAC
AAAATTGACAGTGATTTCTATATGAGGAAAGAGAACTTGACTTACTTCGT
AGACACCTGGTCACCTCTGATGAATTGGCGACAACAAAATTATACCATTA
TAGCAGCCTTCTATTCACTGCGAAAAAATATTACCTCAAGAATTCATCTA
GATTGGAAAAGATCACTTCCTGATATCCAAATACGATTTGTAAAAGGTAT
ATGGAAATTTGGTATTCTTCTGGCTTAATGGTTTATTAATCTTTGGCAAC
TTTTTACACCTCTGGAGGATACAGTTTACAAGGTCTTAAATATCATAACA
ATGTAATCATTTCTGTCACTGAACCTGTTAAACCTTTACATACATGAACG
AAAGAAGTTAGGCCGGGAATCCTTATTCTCCTCGATTCAATTTTACAGAT
AACATGAAATCAAGCAATCCACAAAAGACTTGGCTACGACtggtcaaaaa
atcaaaatcaatttatatGTATATCAGCTCTAACGAAACTTCCAGTGAAT
ACAGACTCTTTCAAGCTTTAAAGCATGGTTTCGGACATATTTTGGGAATG
GATCATCAACCGGACAGTTTCATGTCACCAGTCATGAAACACGAACAACA
GGATATCAAAAATTGTCGGAATGGTTTCACGAATCATTTCGTTCCTCCTG
TCAAACCAATCAGTGAGTATTTACACCATATCTGTCTGATTGCCTTCCTT
GTGTCTGTCTATCTATATGTCTTTTCTATGTCTGTTCATTAATCTTTCGG
TCGGGCTGAAAACTGCTTTGAATGAAATTTGATCATTGAAATCAGTTCAC
TTCCAAAAATGACCAACTACCATAAACCTTTTGTTTCAGAGAGTGCTagt
tttcttttgaatgaaattcGCTGTGCTATAAAGTGCACTATAGAGAGCTC
AAAAAAGAATAAAGGCCGGAAATAAAGGAGATATGTTACTGTATTGAGGC
CAAGGGTGCTTGACTTAACTTTTAGTTTTTAAGATTTGAAAAGACTCACT
TGAGTGCTTCAACTTGAGACTAATTTACGTTTGTAGCTAATCCCACTTCA
ACTTTAAGAACTCTCTTCTTAATCCTGCAATAACGTGAATTTTGTTTATG
GAACTTCTTGAAGCATATACTTTTGTTCAAGTCCAACATCCTAAAATAAA
GGTTTTGCTCGCATAAATGTAAACATCGAGACTCCATTTACTGTCAAATT
CTTGTTGTGCTGAAACGTTTCTTTCGTAAACAAGGTTGAAACCAACGGCT
CTCAACCTATTGTGCTAGTTTTTAAGTGAACATTTGGTGTTTTGTACTTA
ATTAGTCCtaataagaaatttaatttttctgacGTAGATATTTTTTGGCa
tataaattttaaaagataAGTAATACTCGTTTAAGTTGTTGTCTTGTTTA
CGGAAACCTAAGACTGTTGTACTTTTTCAAGTCTAAAGTCAAGACGTCAG
TTAGTCAACACGCATTTTGTgtagttcttcaaaaatggttgaaatttagc
aaaatcaaaaacatgaacgaaaaaaccgacaaaaagcaagaaaaaNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNtcaaaaaatgacgatttcgtttgg
catgtaagaggaagccctagaacaaaccttcgcctagttcgaaaacctag
gacaaagaccaaaacaacgtcttctcttatgtccatatcttctgacgact
ggacgacagatgaagaattagacaatttataaatttaaattatttcgtag
aggtcgatagacctgtgaaatataattctatgaataaaaaaaaaataaaa
aataagtctGTACTTATTCCAAATTTCCTGTCTCAAAAAGATCCTGTCTA
CATACCTGTATGCCAAAGAAAATCAATCGAAAGACAGATGAATAATGTTT
ATTCAAAATCCGTTTTCCTAAGAACTGCAACAAAAGCTCGATCTTTTTGT
TATACTTTAGAGCAATTTTAAAAGGACATTGTTCCTAATAACTCgacatt
ttttatgaaaatatattatGAAATCGTTACCTATGGTAAATTCCCGAAAA
GCCTTGCCGGTTTGATTTAGGCAGTATCAACACAACCGCATATGTTAGGG
GCTGCCATATGAACATCGTATTGAAGTATCATTCCTGTCTTTTGGCTTGG
CTTAGATTAGTTTTCCGCTTTAGAATTTGTATAATCTAACCACATGGCAA
TCCCTCACCAATATCCATGTGATTTTTTTCCTGCACGCGATGCTAACTCC
TGTTTAGTCAAGTTGCAAGCTCATTAGATCACTTTCTTTGATTGACAATA
CTTCATCACCTTATTATTTTCAAGTACCTATCGAAACTATATTGGCCAAA
AAATGACAACCGTTAGACAGTACTCAATAACCCAGACGACAAGATATAAT
ATCAAAAGTATCTGTCCACTCAACACAGTATCGTTGTGTATGGAATTATT
TCTAAGTTTGTGTTAGAGGATTTACCCTACCCCACAGTCCTGGTGGAATT
TTCTTTCCGGATAAAAATTAtctatcaaaatcccaatggcGATTGTGAAT
CTATTGTCTCCAATTCAAAAACGCCAGTAAGGATGGTTTTAGAGTAAAAA
TTCTACCGCTTAATGTCAAATGGGAGGCGTTATGTCAGGTTATTTTTTCC
AACGGGTACAGTTTTTtaactaatttttgcagtgtGGCTGGGTCCTGggt
gtgacacaggggtgttcttATATTGTCTGTGCGAACGTTGATTGAATTCA
CCAAGATAATTATAATACTATTCCTAAGCCAAACTACACCATACTTTGTT
CCAAAccttaaatcttaaaaaaatattcgaGTTATGAAACCTAGTTGGTA
ATTAACATCCTGTCAATTAAACATTAAGATATAAACTCTAATTTAGAAGG
CCAACTTTCTGCCCCTGCCCAATCTAATTGTTGGAGTAGGCAAAAAGTAG
GTAGAGGGTCCGTAagtaaaatctttgcttggaaaagttTGAAGGAAAAC
ATTGCATTAACTTTAGACAACCAATCTTTTGCCCACATTAATATAAAATT
ATAATAGGCAGAACCAGagcccccccgggggggggggggggactagggNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNggggggggggggtactagggttgcgagctgacatGGGGTGCTG
CCCGACTTTCGATTTTACGACTTTTaacgggacaaatttgaccaattttg
accgaatttcgatctttcagggtgtaaaaagtttaaatttcctatttttc
ctacccttagtgggactgaaatttgattgattttttcgacccttagctgg
actttggaagtccaaaaaaggtacccttaagggcggcacataccataccc
tccatttgcctaagtacccccccccccgggggaccAGAACTTATGGTTgt
tagacaaattcaaaaacttcttctttttcatctttcagaGCCANtttgac
caattttgaccaaatttcgatctttcagggtgtaaaaagtttaaatctcc
tatttttcctacccttagtgggactgaaatttgatctTCTGAGACCAGAG
CTTATGGATgttagacaaattcaaaaacttcttctttttcatctttcaga
GCCAGTATGTGGTGGTGacgataaaatcaaaatcaaatcagccCACAATG
AACCTAACGAACCAGACACATACTTTTTAGCCGGTGATCGGTACTGGAAA
GTCACATCAAATGATTCTTACATGCAAAAACATAATCTATGTAGTCGAAC
GTACGAAGCTAACAGAATCGCTAAAAACATGAGATGGCAGGAACAATTTC
TGGTGGATATTGATGAAGGCTTTAAACTACCTGTTGATAATTGGGATACC
ATTTTCTTTAAAGTGAGTTCAAATTACTACAATTAACTCTTGCTAATCAG
AACTCGAACGAGAAGTCGAATGTGTTCCAATTACAAAGAGATTAGAATTA
CGAAGATTATTTTACGAGGGATTCCCCATGAGAGGAATATAAAAcaattc
gaataatagaagttcagATTAGCAAGAGTGAAccatatctttgtttttta
atcGCAGTTTCGGGTGAGGGGCGTGAAATTATGGTTAGTGGCGGTAGACA
AAAAGACCACCCACGGCTCTCCCCGATTCCATACTCAAGGTGTTCTACCT
TCTTATTCGACTCTCTCAGTATTCGGTTTTTCCCTCCTTCCCTCCTTCCC
ACCCTTACGCAATGGTGCCCGCACGAGTCTCTTCTCTCACTGTCGCGGAT
TGTCACTTGACTTTGACGTCTAGATTTGCTTAGGGCCTCTCATGCTCCCT
CCGCCTGTCTTGCCTTTTGCAAAGAGCCTCTAGTATACGCTCTCTGTTTT
ATGGCTTTGCCATCTCTGGTTTACACCTTCTGAATTAAGGTAGTAGTAGT
AACATCTTATAGGGGACCTGTTCTAAGTAATGATACGGTCATGTGTCCTG
CTCCAGCATTACCTCCGATCAATATCGAATCATTTGGTTATTATTATATT
CTACCAATTTAACCTCTTGTAACCTTTCAGGGTTCAGTGTTCTGGCGCTA
CGAGTACGGCGCATGGGACGGACAAGCGGCTAAGAAAATCTCCGACTACT
GGATTGGCATCCCAGACAACATCGATACTGCTTTCATGAGTCGTAGAATT
AATAACAATGAAGATATTCTATTTTTCACCAAAGGTGACctcatttacaa
atttgaaatcaatttaatCAAAGACGCTAATGGCATTGTTCAAAAATATG
GTAAAGTCAAAAGTGATTACCCGAAAAAGATAACAGCGGAATTCCCAAGA
TTACCGAATGATTTAGACACTGCTTACACTACGTATTGTGATTTTCgaag
tttcttttttaaagacaatCATTATTGGGAGTGGGTTGATGGTACTCCTG
TTGTTAAAGGTCCTTATGAAATTCGAGATTTAGTGAATAGTTTTTGTATG
TAATAAAAACTGAGAGATGGACTGATGAAAATTCTCACAATGTGGCACAT
ATTGCGATATCTAGGATACGGTTAAGCTGTCGAACGACGCGATCGAAAGG
AACCAACATGGAAGAAAATGGAATACATCTTCTAGAGTACCCTTTAAACG
AGCAAAACTTTTGAGTTACAGCTGGACTGTATACTGTATCTTAAATCGTa
ataaaaacgaagaaaaatgaaaaactttatgaatttttaaaaatacaaat
ttcaatTATCAACCACTGCAGAGACGATAAAACGAAGTTTGTTGCAAATT
TATTGCAGTCTTTGAAGCAGTGAAAATAATAGATGTTGTTGGATGTTAAA
TGTTTATGATCAAAACCCTGAACTTTATTTTGTCAACATTAAAGATGCAC
ACAGCGTCATATTTGGGATAAATGACTAGATTTGGTAAACTAACGAACAA
AATTGACCTTCAAACATTACATTAACTGGTGAAAAATGCGTGTTAACTTT
AagttttttagaacttttttaaacGATCAACTAACTTGACGTGGCAGCTG
GAATTTTAGTAAAGTTGTTACCAAATTTTATTGACCAAGTTATCTTTATC
AAGGCtgaaataatgtttttattttgaaataaggaTTTTTAACCCCTAGT
GGGGGCCCCTTAAGTGTTCTTGAAAGGTCAATACTAAAGTTTAGGGAAAA
CCTAAAATCTGAAATGACTTTGAAACCTGTAAGATATTTCAGGTAAAcga
gaaaattgagaaaaaagtttgaaaaatcacaaaaaattatttaatttttt
ttttgtaatatatCACAAGTTTTATAATGATaaagtaattttaatttata
ttataaaatttttgaaaaaatatactttaagattttttgagcTGCGAATA
AAaggaattattttcaaaaacg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009347XLOC_009347Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016717-exon-sc0000248-1491911889:134587..134845TCONS_00016717-exon-sc0000248-1491911889:134587..134845Clytia hemisphaericaexon
TCONS_00016717-exon-sc0000248-1510915933:134587..134845TCONS_00016717-exon-sc0000248-1510915933:134587..134845Clytia hemisphaericaexon
TCONS_00016717-exon-sc0000248-1575043694:134587..134845TCONS_00016717-exon-sc0000248-1575043694:134587..134845Clytia hemisphaericaexon
TCONS_00016717-exon-sc0000248-1491911889:141780..142182TCONS_00016717-exon-sc0000248-1491911889:141780..142182Clytia hemisphaericaexon
TCONS_00016717-exon-sc0000248-1510915933:141780..142182TCONS_00016717-exon-sc0000248-1510915933:141780..142182Clytia hemisphaericaexon
TCONS_00016717-exon-sc0000248-1575043694:141780..142182TCONS_00016717-exon-sc0000248-1575043694:141780..142182Clytia hemisphaericaexon
TCONS_00016717-exon-sc0000248-1491911889:142385..142648TCONS_00016717-exon-sc0000248-1491911889:142385..142648Clytia hemisphaericaexon
TCONS_00016717-exon-sc0000248-1510915933:142385..142648TCONS_00016717-exon-sc0000248-1510915933:142385..142648Clytia hemisphaericaexon
TCONS_00016717-exon-sc0000248-1575043694:142385..142648TCONS_00016717-exon-sc0000248-1575043694:142385..142648Clytia hemisphaericaexon
TCONS_00016717-exon-sc0000248-1491911889:146286..146548TCONS_00016717-exon-sc0000248-1491911889:146286..146548Clytia hemisphaericaexon
TCONS_00016717-exon-sc0000248-1510915933:146286..146548TCONS_00016717-exon-sc0000248-1510915933:146286..146548Clytia hemisphaericaexon
TCONS_00016717-exon-sc0000248-1575043694:146286..146548TCONS_00016717-exon-sc0000248-1575043694:146286..146548Clytia hemisphaericaexon
TCONS_00016717-exon-sc0000248-1491911889:147217..148558TCONS_00016717-exon-sc0000248-1491911889:147217..148558Clytia hemisphaericaexon
TCONS_00016717-exon-sc0000248-1510915933:147217..148558TCONS_00016717-exon-sc0000248-1510915933:147217..148558Clytia hemisphaericaexon
TCONS_00016717-exon-sc0000248-1575043694:147217..148558TCONS_00016717-exon-sc0000248-1575043694:147217..148558Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000248supercontigsc0000248:134587..148558 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.198626	0.163893	0	0.1354	0.721159	0.32564	1.31612	1.04823	1.01778e-09	0.558184	0.306081	1.03792	6.03031	5.23511	11.5863	8.47794	2.81011	2.74702e-09	1.59245	0.608991	0	0	0	0	2.96919	1.0834	0	0.0896259	0	0.340099
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016717 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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