TCONS_00016635 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016635
Unique NameTCONS_00016635
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length368

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016635 ID=TCONS_00016635|Name=TCONS_00016635|organism=Clytia hemisphaerica|type=transcript|length=368bp
TAAATTCCAGACTCAAATTACAGGAGGGAGGGCGGAAAGGGCGGAATTAA
TAcagtattttttttctcgcacaCAATTTCCAACTTGTGCGCCCACAACA
TACTTCTCGTGCGCATAATATACTTCTCATGCGCACAACATACTTCTCGC
GCGCACAATATACTTTTCTCGCTCGCACAGTATATATTTCTCGTGCACAG
TCATGTTCTCTCACGCAGAAATAATGAGCCTTCTAGGCCATCGTACACAA
GCTGACATacagtacacgctttttataagaacatccaaattttttgagtc
tccatggctccgaatggggtCTTGGtcccccaacaaatttaggtcccccc
acttttcagtaaggttca
Run BLAST on NCBI

transcript from alignment at sc0000243:372144..372511

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016635 ID=TCONS_00016635|Name=TCONS_00016635|organism=Clytia hemisphaerica|type=transcript|length=368bp|location=Sequence derived from alignment at sc0000243:372144..372511 (Clytia hemisphaerica)
tgaaccttactgaaaagtggggggacctaaatttgttgggggaCCAAGac
cccattcggagccatggagactcaaaaaatttggatgttcttataaaaag
cgtgtactgtATGTCAGCTTGTGTACGATGGCCTAGAAGGCTCATTATTT
CTGCGTGAGAGAACATGACTGTGCACGAGAAATATATACTGTGCGAGCGA
GAAAAGTATATTGTGCGCGCGAGAAGTATGTTGTGCGCATGAGAAGTATA
TTATGCGCACGAGAAGTATGTTGTGGGCGCACAAGTTGGAAATTGtgtgc
gagaaaaaaaatactgTATTAATTCCGCCCTTTCCGCCCTCCCTCCTGTA
ATTTGAGTCTGGAATTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009305XLOC_009305Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016635-exon-sc0000243-1491911889:372144..372511TCONS_00016635-exon-sc0000243-1491911889:372144..372511Clytia hemisphaericaexon
TCONS_00016635-exon-sc0000243-1510915933:372144..372511TCONS_00016635-exon-sc0000243-1510915933:372144..372511Clytia hemisphaericaexon
TCONS_00016635-exon-sc0000243-1575043694:372144..372511TCONS_00016635-exon-sc0000243-1575043694:372144..372511Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000243supercontigsc0000243:372144..372511 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.22313	0.501928	0.505279	0	0.300904	0.237778	0	0.445652	0.564083	0.232903	2.03455	0.148604	0.890382	0.462335	2.44499	2.03954	0.50251	0.686741	0.237193	0	1.29441	0.315684	0	0.232593	0.297579	0.641419	1.00315	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016635 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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