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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016566 ID=TCONS_00016566|Name=TCONS_00016566|organism=Clytia hemisphaerica|type=transcript|length=1410bp
cAAGGTTAACAATATAGGTTAACTTCTAACCGAAATCCAATCAGGGGGTC
TGAAGACTAATACTGCTAGTGATGCCAGGAAAAGAATCGTTAATGGAAAG
GGATAGAGACAGAATAACATgtagtctgattcgcagacctatacttccta
taagaaactttttcgctagaggatgagcagaagcctaaatAACATGCTGC
cccaagcggtttgcgtgaatgcgtgaattggaaatcTTTGCGCGTGAACA
GAAACTGAGTGAATTGCAAATAAAAATTGTGTGAATTCAAGGTCCGCTTG
GGGCCTCTAATATGAATGAAATTGAGCAACTGAACAAAAAGTCATCAGCT
ATCAAAACCACTCGGACATTACCAGAGTTTTATCAAAGTAAAAATTGTAA
ACTCTAGCTTCAATATGCTCCTACTTGAACCAAGCCTGATCTATGAAAGG
ATGGAGACCCTCTGGAAAAAAGAGACACCAAGGAATCGCAATTGCTTCAT
ATGAATTATTTGGTTGGGTCAGGTAAGAGGAGACGATTAAAAAGACGATG
ATTTTCTTTGACTAAGGGGTGTACAGCGATTAAAGAGTCTAATGCAGGAT
AAAAATGAGATGTGGTTTCTTTCCATGCTTCCACTTGATAGCGTGATACC
GGGCTGCAGTAATCCAATAAGGCTCATTACAAAATGTGTATGCATGGTCT
GATGCGAAAGGGTTATGTGTTGATCGGGTGGtacgagaaaaaaacatcaA
CATGATCAAAGTGTTTGAGATAATTGGATGGAATGATGAGATCATGTTTC
GCAATTAATTACGTTCGTTTCATCATGAAATATCAGATGATTATAATAGC
ATGGATGACAATGTTTGTCAATCATAATAAAGGAATCACGTCACTTTTAA
ACGGATAACTTATTAAATCGAAATGTAAAAAAACACGAATAATCTACTGC
TTTATGTAGAACTAGACTTTACTACATAACTCATAACTCACAAACCCCTA
CACTCGAATATCTCCATCAAACACACTTTTTACCCCTTCAGTCCACAACC
AAACAACTCTCTCTATCATTCTAAGTGCGCTCCCAATAAGCAAGGGTAGG
AGCTGTATTTTTACGATTTGGGGGTTGACAGGGTTAGCATGAAAAGTGAT
TTTCCCTATTGAATTCCTTTGGGTTTTCCCTAAGTGCCTTTTTAGAGGTA
CTTGCTCCTGCCTATTAGTTGGCCTTTGACTTCAAGTGAGCTACAGAGCT
AGTTGAAGATGTTGCAAAAAATTCCGCAATACCGTATAGTCCAGGTTGGG
GTAGCCAAAAACCTGtttgatccttttaatgattttttttccagaaaatt
aGGTGGAGTCCAGTCTCTCtgtattttgtcaaattttccggACATTGTGA
CTACGTAAGG Run BLAST on NCBI transcript from alignment at sc0000241:273894..275303 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016566 ID=TCONS_00016566|Name=TCONS_00016566|organism=Clytia hemisphaerica|type=transcript|length=1410bp|location=Sequence derived from alignment at sc0000241:273894..275303 (Clytia hemisphaerica)
CCTTACGTAGTCACAATGTccggaaaatttgacaaaatacaGAGAGACTG
GACTCCACCtaattttctggaaaaaaaatcattaaaaggatcaaaCAGGT
TTTTGGCTACCCCAACCTGGACTATACGGTATTGCGGAATTTTTTGCAAC
ATCTTCAACTAGCTCTGTAGCTCACTTGAAGTCAAAGGCCAACTAATAGG
CAGGAGCAAGTACCTCTAAAAAGGCACTTAGGGAAAACCCAAAGGAATTC
AATAGGGAAAATCACTTTTCATGCTAACCCTGTCAACCCCCAAATCGTAA
AAATACAGCTCCTACCCTTGCTTATTGGGAGCGCACTTAGAATGATAGAG
AGAGTTGTTTGGTTGTGGACTGAAGGGGTAAAAAGTGTGTTTGATGGAGA
TATTCGAGTGTAGGGGTTTGTGAGTTATGAGTTATGTAGTAAAGTCTAGT
TCTACATAAAGCAGTAGATTATTCGTGTTTTTTTACATTTCGATTTAATA
AGTTATCCGTTTAAAAGTGACGTGATTCCTTTATTATGATTGACAAACAT
TGTCATCCATGCTATTATAATCATCTGATATTTCATGATGAAACGAACGT
AATTAATTGCGAAACATGATCTCATCATTCCATCCAATTATCTCAAACAC
TTTGATCATGTtgatgtttttttctcgtaCCACCCGATCAACACATAACC
CTTTCGCATCAGACCATGCATACACATTTTGTAATGAGCCTTATTGGATT
ACTGCAGCCCGGTATCACGCTATCAAGTGGAAGCATGGAAAGAAACCACA
TCTCATTTTTATCCTGCATTAGACTCTTTAATCGCTGTACACCCCTTAGT
CAAAGAAAATCATCGTCTTTTTAATCGTCTCCTCTTACCTGACCCAACCA
AATAATTCATATGAAGCAATTGCGATTCCTTGGTGTCTCTTTTTTCCAGA
GGGTCTCCATCCTTTCATAGATCAGGCTTGGTTCAAGTAGGAGCATATTG
AAGCTAGAGTTTACAATTTTTACTTTGATAAAACTCTGGTAATGTCCGAG
TGGTTTTGATAGCTGATGACTTTTTGTTCAGTTGCTCAATTTCATTCATA
TTAGAGGCCCCAAGCGGACCTTGAATTCACACAATTTTTATTTGCAATTC
ACTCAGTTTCTGTTCACGCGCAAAgatttccaattcacgcattcacgcaa
accgcttgggGCAGCATGTTatttaggcttctgctcatcctctagcgaaa
aagtttcttataggaagtataggtctgcgaatcagactacATGTTATTCT
GTCTCTATCCCTTTCCATTAACGATTCTTTTCCTGGCATCACTAGCAGTA
TTAGTCTTCAGACCCCCTGATTGGATTTCGGTTAGAAGTTAACCTATATT
GTTAACCTTg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016566-exon-sc0000241-1491911889:273894..275303 | TCONS_00016566-exon-sc0000241-1491911889:273894..275303 | Clytia hemisphaerica | exon |
| TCONS_00016566-exon-sc0000241-1510915933:273894..275303 | TCONS_00016566-exon-sc0000241-1510915933:273894..275303 | Clytia hemisphaerica | exon |
| TCONS_00016566-exon-sc0000241-1575043694:273894..275303 | TCONS_00016566-exon-sc0000241-1575043694:273894..275303 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000241 | supercontig | sc0000241:273894..275303 . |
Blast
The following BLAST results are available for this feature:
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