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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016464 ID=TCONS_00016464|Name=TCONS_00016464|organism=Clytia hemisphaerica|type=transcript|length=1804bp
TATATTATGAGTGTGTAATTGTTTAATGTTGAAGTTTTAAATTATTCAGA
CATTGTGATTAGGAAAAGGTCTATATCTATATGAAACATATCTCTCAAAA
AAGGTTCTTGCACCTATGACTTTAGTATGAGAATTGTCTTATGTGCTTTC
TATAGAAATAGCAGTGAAAATAAAGGCTAATATAGATTTAGATTTATCAC
AAAGAGGATGTCAAGAAGAGATCTTTTATCAAGACACGAAACAGTTGCCA
AATTTGATGGTTTGGAACAACAGCAATGTTTTTTCATGACTGCATTTTGC
CCTGATCAATGTGGTCACGGTGGAACAAATGGTGTCTTTTCAGTTGTCAA
ATATTTGAATTATGAAAAACCTGGAGAATATGGAGATGAAAAAGGTGAGA
AGCATTATGTTAGGGTCACTGATCCTGTGGAAGCTTCTGGCTTAACACCT
GAACGAAAATCAGTGTTGGAAAGTTTGAAAGGTGGGGATTATGTGTTGTT
ATCATGGAACCATGATTATGTTCACACTGAAGGTTGTTCGTCTCCAGAAA
GACCAATCACAAAATTGGTCAAGATTTCCAAAGAGGATGCTGacaaaatg
taactttttcaCTGAttagagaaaaagatttttatttctctatcattgtt
ttataATATGGCCtgggattttttttattgtttctgTTATCATTGTTGCA
CATGGACCTTCTTGCTTTTGATGCTCTGGGTACTGGGTAAAAACAGATTA
AATGGGATTTTTTAGCTTTAAATTGTTGGAATCTATTATAACACAATAGT
CTTTGGGTAGTGTTAGATTGAATAAGGTCTTGTTGGCTTCATAACATAAA
GTTTTCACAATCATAATAGTTATAACaatttagaaatagaaaaaaggtTG
ATAATTTTATATgtaataaattttgtaaatttggtgaattactttttttt
tttaagatgattATATATTAAGTAGACTTTAGATGTATTTATGAACTAGC
TCTAATTCTAAAACAAGTTCTAGTATTGCTAGGCCTGGTCATTTTCATGT
TGAAGAGGGCGAATATCTTCTTGTGCATATTTTGATATAATTATAAAGCT
ATATGTAAAGTATTAGTTTTGTCTTCTCATAAATAATTTTGTGGGTCAGC
GAGAAATAAACGTAAAACTATATTAAGTTGAAATTTGTTTCACTTTTCAC
ATTGTTATCTTTATGTTTatcagttgaaaataataatatgTCAACAAGAG
ATTTACTGGCAAAACATGAAACTGTAGCCACATTTAATGGATTGGAGGAT
AGGCCATGTTTTTTTCGAACATCACGTTGTCCTAATGAATGCGGTCACGC
TGCAACCCTTGCAGTCTTCCATGTCATCAAATATTTGAATTATGAGAAAC
CTGGAAAATATGGAgataaaaaacaagaaaagttTCATGTGCGACCATCT
GATTCTGTGGAAATTTCTGGCCTAACACCTGATCGAAAATCAGTGTTGGA
AAGTTTGAAAGGTGGGGATTATGTGTTGTTATCATGGAACCATGATTATG
TTCACACTGGAGGTTGTTCGTCTCCTCAAAGACCAATCACAAAATTGGAC
AAGATTTCTAAAGAGGAAGCTGAtgaaatgtgatttttttccTTTCCTGT
AAATATTGACCAGGATTTAGAATAGATAATCATAGAcgcaaaaatttaca
aatatttttaaagcacTATCTTTTTACCAGACACTTGTACACTTTATGAT
CGTTAATTATTGACGCGTTATTAAAATTGTTATGATTATTCATATTTGGG
Aggc Run BLAST on NCBI transcript from alignment at sc0000240:93378..95181+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016464 ID=TCONS_00016464|Name=TCONS_00016464|organism=Clytia hemisphaerica|type=transcript|length=1804bp|location=Sequence derived from alignment at sc0000240:93378..95181+ (Clytia hemisphaerica)
TATATTATGAGTGTGTAATTGTTTAATGTTGAAGTTTTAAATTATTCAGA
CATTGTGATTAGGAAAAGGTCTATATCTATATGAAACATATCTCTCAAAA
AAGGTTCTTGCACCTATGACTTTAGTATGAGAATTGTCTTATGTGCTTTC
TATAGAAATAGCAGTGAAAATAAAGGCTAATATAGATTTAGATTTATCAC
AAAGAGGATGTCAAGAAGAGATCTTTTATCAAGACACGAAACAGTTGCCA
AATTTGATGGTTTGGAACAACAGCAATGTTTTTTCATGACTGCATTTTGC
CCTGATCAATGTGGTCACGGTGGAACAAATGGTGTCTTTTCAGTTGTCAA
ATATTTGAATTATGAAAAACCTGGAGAATATGGAGATGAAAAAGGTGAGA
AGCATTATGTTAGGGTCACTGATCCTGTGGAAGCTTCTGGCTTAACACCT
GAACGAAAATCAGTGTTGGAAAGTTTGAAAGGTGGGGATTATGTGTTGTT
ATCATGGAACCATGATTATGTTCACACTGAAGGTTGTTCGTCTCCAGAAA
GACCAATCACAAAATTGGTCAAGATTTCCAAAGAGGATGCTGacaaaatg
taactttttcaCTGAttagagaaaaagatttttatttctctatcattgtt
ttataATATGGCCtgggattttttttattgtttctgTTATCATTGTTGCA
CATGGACCTTCTTGCTTTTGATGCTCTGGGTACTGGGTAAAAACAGATTA
AATGGGATTTTTTAGCTTTAAATTGTTGGAATCTATTATAACACAATAGT
CTTTGGGTAGTGTTAGATTGAATAAGGTCTTGTTGGCTTCATAACATAAA
GTTTTCACAATCATAATAGTTATAACaatttagaaatagaaaaaaggtTG
ATAATTTTATATgtaataaattttgtaaatttggtgaattactttttttt
tttaagatgattATATATTAAGTAGACTTTAGATGTATTTATGAACTAGC
TCTAATTCTAAAACAAGTTCTAGTATTGCTAGGCCTGGTCATTTTCATGT
TGAAGAGGGCGAATATCTTCTTGTGCATATTTTGATATAATTATAAAGCT
ATATGTAAAGTATTAGTTTTGTCTTCTCATAAATAATTTTGTGGGTCAGC
GAGAAATAAACGTAAAACTATATTAAGTTGAAATTTGTTTCACTTTTCAC
ATTGTTATCTTTATGTTTatcagttgaaaataataatatgTCAACAAGAG
ATTTACTGGCAAAACATGAAACTGTAGCCACATTTAATGGATTGGAGGAT
AGGCCATGTTTTTTTCGAACATCACGTTGTCCTAATGAATGCGGTCACGC
TGCAACCCTTGCAGTCTTCCATGTCATCAAATATTTGAATTATGAGAAAC
CTGGAAAATATGGAgataaaaaacaagaaaagttTCATGTGCGACCATCT
GATTCTGTGGAAATTTCTGGCCTAACACCTGATCGAAAATCAGTGTTGGA
AAGTTTGAAAGGTGGGGATTATGTGTTGTTATCATGGAACCATGATTATG
TTCACACTGGAGGTTGTTCGTCTCCTCAAAGACCAATCACAAAATTGGAC
AAGATTTCTAAAGAGGAAGCTGAtgaaatgtgatttttttccTTTCCTGT
AAATATTGACCAGGATTTAGAATAGATAATCATAGAcgcaaaaatttaca
aatatttttaaagcacTATCTTTTTACCAGACACTTGTACACTTTATGAT
CGTTAATTATTGACGCGTTATTAAAATTGTTATGATTATTCATATTTGGG
Aggc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016464-exon-sc0000240-1491911889:93378..95181 | TCONS_00016464-exon-sc0000240-1491911889:93378..95181 | Clytia hemisphaerica | exon |
| TCONS_00016464-exon-sc0000240-1510915933:93378..95181 | TCONS_00016464-exon-sc0000240-1510915933:93378..95181 | Clytia hemisphaerica | exon |
| TCONS_00016464-exon-sc0000240-1575043694:93378..95181 | TCONS_00016464-exon-sc0000240-1575043694:93378..95181 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000240 | supercontig | sc0000240:93378..95181 + |
Blast
The following BLAST results are available for this feature:
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