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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016387 ID=TCONS_00016387|Name=TCONS_00016387|organism=Clytia hemisphaerica|type=transcript|length=1105bp
AGGCTTCTGTATTGAAGAGCTTGAAGCACGCCATCTAGTTCTTcaggctt
tacagaaatctgtagtTGGAACGCTTCCAAATATCGCTTGTAGCTACAAG
ATTTCGTGggagttttcttttttactcaaatactttttttgaaataaaag
aattCGTTCTTATCGGATAGGAAAAACTAATCCAAACAGCTCTTGATGTT
CCACGAATTCCACGCATTCGCTTCCGCACCATCTCTCTCGTTCTTGTATT
TTATTAAGGGTCCCTTTACACTTGAATGGTTACTCATCGAGGCAAAATGT
TTGTAGTGTACAACTTTGGTATTGTAAttaaaaagttggtattaaaaaCC
TTTTTGGCGTGCCATAGTATTCTATACTCTCATGGAAAAGGCGATATACA
TTTTACAGTCAGGGATACGgctaagaaagttaaaattgttttaaaagatG
TTCTTTTTGTACCGAAAACCCAAAACAAGCTTCGTTGATTTCCAGGGAGA
GTCTTGCGGAATATCCGTCGAAGGAAAACGTTATAGCGTCGGAAAGAACC
ACGGTAAACTTTATAAACTATGGGTATGGATTTCGAGCAAACTGATCcaa
caaaaatgtttgaagacAATCAAGGAGCTATTGATTCGGCAAAGAACCCA
ACTCACCACTCTCGAACCAAACACATTGACATTAAGTTTCATCACGTGCG
CGATGCTTTTGCAAAGAAAGTAATTGATTTGAAATATTGCCCTATTGATG
AAATGATTGCTGACCTTTTAACAAAGGGACTCCCAAGACCTCAATTTGAA
AAACTTAGAGAGGGACTTGGTGTTAAAATGGTTTAATGACTAACGGACTt
gagatttatttagattttattttttataagtaaAACGTCAAGTTTACTAC
TTTAAAAAGCTGATTTCATTTCCATTACGGGTTTTACATTGGCTGTCCTT
TTAATTGTCACTAATTATTTTACCGTATTGAAGTGTGTAATTTTTCCTTA
GgctttttattataaaaatagtACTCTAGTACTCTGTGTTTCTGATTTTT
AAGAATTATTACATCGCTTGGTTTTATCCGTTCATACCTCTAAACTAATT
TTGCC Run BLAST on NCBI transcript from alignment at sc0000233:117279..118383 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016387 ID=TCONS_00016387|Name=TCONS_00016387|organism=Clytia hemisphaerica|type=transcript|length=1105bp|location=Sequence derived from alignment at sc0000233:117279..118383 (Clytia hemisphaerica)
GGCAAAATTAGTTTAGAGGTATGAACGGATAAAACCAAGCGATGTAATAA
TTCTTAAAAATCAGAAACACAGAGTACTAGAGTactatttttataataaa
aagcCTAAGGAAAAATTACACACTTCAATACGGTAAAATAATTAGTGACA
ATTAAAAGGACAGCCAATGTAAAACCCGTAATGGAAATGAAATCAGCTTT
TTAAAGTAGTAAACTTGACGTTttacttataaaaaataaaatctaaataa
atctcaAGTCCGTTAGTCATTAAACCATTTTAACACCAAGTCCCTCTCTA
AGTTTTTCAAATTGAGGTCTTGGGAGTCCCTTTGTTAAAAGGTCAGCAAT
CATTTCATCAATAGGGCAATATTTCAAATCAATTACTTTCTTTGCAAAAG
CATCGCGCACGTGATGAAACTTAATGTCAATGTGTTTGGTTCGAGAGTGG
TGAGTTGGGTTCTTTGCCGAATCAATAGCTCCTTGATTgtcttcaaacat
ttttgttgGATCAGTTTGCTCGAAATCCATACCCATAGTTTATAAAGTTT
ACCGTGGTTCTTTCCGACGCTATAACGTTTTCCTTCGACGGATATTCCGC
AAGACTCTCCCTGGAAATCAACGAAGCTTGTTTTGGGTTTTCGGTACAAA
AAGAACatcttttaaaacaattttaactttcttagcCGTATCCCTGACTG
TAAAATGTATATCGCCTTTTCCATGAGAGTATAGAATACTATGGCACGCC
AAAAAGGtttttaataccaactttttaaTTACAATACCAAAGTTGTACAC
TACAAACATTTTGCCTCGATGAGTAACCATTCAAGTGTAAAGGGACCCTT
AATAAAATACAAGAACGAGAGAGATGGTGCGGAAGCGAATGCGTGGAATT
CGTGGAACATCAAGAGCTGTTTGGATTAGTTTTTCCTATCCGATAAGAAC
GaattcttttatttcaaaaaaagtatttgagtaaaaaagaaaactccCAC
GAAATCTTGTAGCTACAAGCGATATTTGGAAGCGTTCCAactacagattt
ctgtaaagcctgAAGAACTAGATGGCGTGCTTCAAGCTCTTCAATACAGA
AGCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016387-exon-sc0000233-1491911889:117279..118383 | TCONS_00016387-exon-sc0000233-1491911889:117279..118383 | Clytia hemisphaerica | exon |
| TCONS_00016387-exon-sc0000233-1510915933:117279..118383 | TCONS_00016387-exon-sc0000233-1510915933:117279..118383 | Clytia hemisphaerica | exon |
| TCONS_00016387-exon-sc0000233-1575043694:117279..118383 | TCONS_00016387-exon-sc0000233-1575043694:117279..118383 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000233 | supercontig | sc0000233:117279..118383 . |
Blast
The following BLAST results are available for this feature:
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