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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016376 ID=TCONS_00016376|Name=TCONS_00016376|organism=Clytia hemisphaerica|type=transcript|length=2720bp
CTTAGTATCAAGAGCAGCAGACTCGAAAACCGAAGAAGAAgcgaaaaaag
aagaagaaatccaACAATTCTAATGAACCTGAGAATACAAATCATCTTCA
TTTCAACGaagatgaatttgaaaatctcCTCATTCACGAAACAGAAAATG
ATAATCAAGACCATACTCAACATGTTGGATTTGTAGTTGAAAATCAGGAC
CAGATTGTTGAAGATGAATGTCAATTTGTTGAACAGCAAGAAAGAGAAGT
GGTTACAACAACTTCTGAACAGTACACAGACGAATGGTCGGATTATTTGT
CAAACACACCAACGGGCTGGGATGAATATTGGACTCAATACTCTAATCAA
CTGGTTTGGCATGATTGGTGTCAgaaatttaatgaaatgaaaatacagTT
TATTCAAAAGAAACAGATCGGagGCGACTCTTTGAAGAATTTAACGGTTG
ACGATGTTGATTGGAACGATGAAGCTTGGAATGAAATTTATCAATCCCAT
TACTGGCAATCTTTCTGCTTCTACCTGGAGgaatataaaaaagacaacTT
GAAAGAAGAAAGACCCCTTGTGGAAACTGGGCCAAACATCGATAATTGCG
AACAATCTCcgaaatcaaacaaaggaatgGAAGAACCAAATGCTTTGATA
TTGACGACTGAGAATCAAGAGATCAGTGATGACAAAACCTGCATAGCAAT
GACTGATCTCACTGAATATCAAGACAAAGCCAGGTCCGAAGAGAATGTAG
AATCGATCGTATCAACCTTGTTAGAGGAAATGGTGACGAAAGTggtcaaa
aacacaaagaaatcttcatcCTCAAAAAGTAAGAAGAAAACTCGGAAATA
TGAAGGCGTCGGTGCATTCTTGGAGAGGCTAAATACTTCATCAACTGttg
atgatgataatgatgGTGATGGTGAAACTAAAGATGTTGTTGGCGATTCA
ACGCCGCTGGATCAGTTGATGGAACAAGAAGGAGGAAACTGCTCGCCTGT
TTCTGAGCAAAGTGAACATCAACCAAAAGTAACCGATGCTGAGGTAAGCC
CAGGGGACATCGAGATGGCGGATAGTATAGAAACAACGGACCATCACGCT
TCGAATATCACAGAACAAATACCTTTCGATTACTCTTTATTTGGACTTTC
AAGTAACcgtaacaaaagaaaacattcaCCGTTATTCAAAAGAGCTGAAA
CCTGGTATTTACCACCTTATTCGGGGAAACGAAAACGGGTTACTTTCACT
GACGAAAACACCGAAACGGAAAGTTTATCTATGAACTTGGATTCGACAAA
AGATGTAGTGTCTTCATTGGAATCAGACAAGAGTCATTCCTTAGAATCGA
AACcgttcttcaaaaatgtttcgAAATTTTTGAGGACTATTAAAGATAAA
ATTACGAAAACCTTCAAGATAAGTAATAACAACCAGGCCAAGTCTGATTC
TCTTTCGAACCATACCGAGACTAACGAACTCAAAGAAGAAACACCTGAAG
CAGGCCTCCCTCCTCCTAAACGTAAATCTAGGCGGACCTTCTATCACGAA
CATATTCCTGATGAAATAGTGGACCAGTTCGGTAAAGAAATTGGGAAATA
CTGGGCTCAACGTTACCGATATTTTTCCCGATATGACGAAGGTATACAGC
TTGACCGCGAGGGTTGGTTTTCAGTGACACCGGNGGGAAATACTGGGCTC
AACGTTACCGATATTTTTCCCGATATGACGAAGGTATACAGCTTGACCGC
GAGGGTTGGTTTTCAGTGACACCGGAAAAGATAGCGGAACACATTGCGGA
AAGATGTCAATCTGATGTCGTTGTGGATGCATTCTGCGGCGTCGGTGGCA
ACGCTATACAGTTTGCGTTTACGTGTCATCACGTTATTGCGATTGATATT
GATCCCGTACGTCTAGAATGCGCCCGTCACAATGCACGCGTTTACGGCGT
CGAGGATCGTATATCGTTTATATTAGGCGATTTCTTTCAATTAGCACCTT
ACCTAAAAGCAGATGTTGTTTTCCTATCACCTCCATGGGGCGGTCCAGAT
TATATCTCAGCGGACGTTTTCGATATTGAAACAATGATGTTACCGGTGGG
AGGTACGGAACTATTCCGGTATGCATCAATGATAACCGGGAATGTGGCAA
TGTTCTTACCAAGGAATGTTGATGTAGAGCAAGTCATCGCATTAACTGAA
CCGGGTCGTAAAGTTGAAATCGAGAAAAACTTGTTGAACAACAAAGTGAA
AACTATCATGGTTTACTATGGTGATTTAGTATCTAATATGACTTGACTCG
ATAGTGTGTCTTTCTAGTTATTGCTCGACTCGATAAATCTCATTCAAATT
CTTTCTNCTATGGTGATTTAGTATCTAATATGACTTGACTCGATAGTGTG
TCTTTCTAGTTATTGCTCGACTCGATAAATCTCATTCAAATTCTTTCTCC
TTAAGAATTAGTTTGTTACTCTCGTGTACCCAATAGTAATAATCGGAAGT
TAAAAAATATCTTGTTGTAAATAATCTTAACCTTTCCAGCacgctgtttt
ttatattttcacgctgtctacgcgcaactttttttgagaaaacgcgGGGT
TTGGGAAATTTGCCATAATTCAAGAACTAGAAATCTTTTGGCAAAAAGTA
AActatccctgaaaagctaattaAGTTTTGCAGCTTTTAGGTTGGGTACA
AGTTCAATTAAAGTATTCTA Run BLAST on NCBI protein sequence of TCONS_00016376-protein >TCONS_00016376-protein ID=TCONS_00016376-protein|Name=TCONS_00016376-protein|organism=Clytia hemisphaerica|type=polypeptide|length=460bp
MKIQFIQKKQIGGDSLKNLTVDDVDWNDEAWNEIYQSHYWQSFCFYLEEY
KKDNLKEERPLVETGPNIDNCEQSPKSNKGMEEPNALILTTENQEISDDK
TCIAMTDLTEYQDKARSEENVESIVSTLLEEMVTKVVKNTKKSSSSKSKK
KTRKYEGVGAFLERLNTSSTVDDDNDGDGETKDVVGDSTPLDQLMEQEGG
NCSPVSEQSEHQPKVTDAEVSPGDIEMADSIETTDHHASNITEQIPFDYS
LFGLSSNRNKRKHSPLFKRAETWYLPPYSGKRKRVTFTDENTETESLSMN
LDSTKDVVSSLESDKSHSLESKPFFKNVSKFLRTIKDKITKTFKISNNNQ
AKSDSLSNHTETNELKEETPEAGLPPPKRKSRRTFYHEHIPDEIVDQFGK
EIGKYWAQRYRYFSRYDEGIQLDREGWFSVTPXGNTGLNVTDIFPDMTKV
YSLTARVGFQ Run BLAST on NCBI transcript from alignment at sc0000233:323048..329172- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016376 ID=TCONS_00016376|Name=TCONS_00016376|organism=Clytia hemisphaerica|type=transcript|length=6125bp|location=Sequence derived from alignment at sc0000233:323048..329172- (Clytia hemisphaerica)
CTTAGTATCAAGAGCAGCAGACTCGAAAACCGAAGAAGAAGCGAAAAAAG
AAGAAGAAATCCAACAATTCTAATGAACCTGAGAATACAAATCATCTTCA
TTTCAACGAAGATGAATTTGAAAATCTCCTCATTCACGAAACAGAAAATG
ATAATCAAGACCATACTCAACATGTTGGATTTGTAGTTGAAAATCAGGAC
CAGATTGTTGAAGATGAATGTCAATTTGTTGAACAGCAAGAAAGAGAAGT
GGTTACAACAACTTCTGAACAGTACACAGACGAATGGTCGGATTATTTGT
CAAACACACCAACGGGCTGGGATGAATATTGGACTCAATACTCTAATCAA
CTGGTTTGGCATGATTGGTGTCAGAAATTTAATGAAATGAAAATACAGTT
TATTCAAAAGAAACAGATCGGAGGTTTTAAAGATTTTTTATTAAAAAGAC
GGTCACTGTTTCTGTTTTTATGCGATCGTCCAAAATACCGCTCCAGAGAT
AATTTTTCTTCTCCAANTTGTTTTTATCGTCCAAAATACCGCTCCAGAGA
TAATTTTTCTTCTCCAAAAGTCGATCTTTCTCTCCCCCCCCCTACAAAAT
TACCCATTAAAGGAAATAAAGAAATATCACGAGATGGACAACACACTCTC
TTTTCCCGGATTGGGTCCGACTCACAGATGAGTAGGAATCTCTGTGCTAA
CAAGTATTGTGACTCTGAAATTACGAGCTTTAAAAGCCATGACTTACACA
CCTTGACAGATGGTGATGCAAGACCGAGAGTGTAGCATATTTTGCGGTTC
TTCGCAATGCGCAAGCACATGAATATTTTTCGAAAGTTAAGGGTGTTTAA
ATTCATTCTGCAAGGGGGTCCGACAAAAAGCTTTGATAGGTCAAAAGTCT
GACGTCACAAGAAACTGCTTGGGCAAAAATTAAAGAAAAATTAAAAACCC
AGGATTAAAACTTATCATTTCAGGCGACTCTTTGAAGAATTTAACGGTTG
ACGATGTTGATTGGAACGATGAAGCTTGGAATGAAATTTATCAATCCCAT
TACTGGCAATCTTTCTGCTTCTACCTGGAGGAATATAAAAAAGACAACTT
GAAAGAAGGTAACAAATACATAACGAGGACCTTGATTTCGTGTTTAACTT
TTAAGCTAAGAAAAGAGAAACCCCTTCAGTATTCAGCTCAAACTTCTCCT
CTGTTGGATCGTAATTGGGTTAATATTTTTTTAAATCTGAGCCTATTTTT
CTATCCTAAATCTTTCAAGAACTTATTGGAAATTTTTCACTTACGTCTGC
TTACACACCTTTTTTATAAGAACAACTTTTTAAAAACATGAGACTCGATT
CGACCAAATCCTAAGAACATAAAAAGAACAATCCCAGCCTCAGATTTAAA
CAGTGACAAAAAAAGCTGATTAGAGAACCCTTTAAGGTCATTTAATTTTA
TTCAACATAATAAGCGTATAACATTAAAGTCTAATAAAATCACTTAAATT
GGGAGAGCTGAGCCTTAAAAATTTATTGGATCTGATAAAAAAAGCCCGTA
TTTTACGTTTCAGAAAGACCCCTTGTGGAAACTGGGCCAAACATCGATAA
TTGCGAACAATCTCCGAAATCAAACAAAGGAATGGAAGAACCAAATGCTT
TGATATTGACGACTGAGAATCAAGAGATCAGTGATGACAAAACCTGCATA
GCAATGACTGATCTCACTGAATATCAAGACAAAGCCAGGTCCGAAGAGAA
TGTAGAATCGATCGTATCAACCTTGTTAGAGGAAATGGTGACGAAAGTGG
TCAAAAACACAAAGAAATCTTCATCCTCAAAAAGTAAGAAGAAAACTCGG
AAATATGAAGGCGTCGGTGCATTCTTGGAGAGGCTAAATACTTCATCAAC
TGTTGATGATGATAATGATGGTGATGGTGAAACTAAAGATGTTGTTGGCG
ATTCAACGCCGCTGGATCAGTTGATGGAACAAGAAGGAGGAAACTGCTCG
CCTGTTTCTGAGCAAAGTGAACATCAACCAAAAGTAACCGATGCTGAGGT
AAGCCCAGGGGACATCGAGGTAGGTTGTTTATTTTCTTCGTATACTAATC
AAGATTGCCAAGATTGCCAAGGCTTGCAAAAGAATATTGACCCCTGCAGC
GAGAAATGCATGTGGGGATAGTATGCGTCATATTAAAGTCCTCCTTTTCT
TCCAATACATAGTTTATCGCCATTTCACTCAACTAAACTCGAACACAGTC
CCCTTTTTTGATATGGTTGACAAAATGTGTTTAAAAACAAAACTTAAACA
TAGTGCCCCCCCCCCCCTTTATAAAGGGGGGGGGAAACCAATTTTCCAAT
TTTGGGTGGGTGAGGGGGGAAATGAAAATTTGAATAGTAAAGGGGGGGGG
GACCGAATTGTGCAATTTTGGAAAGGAGGGGGGGGAAATGAAAATTTGAA
TAGTAAAGGGGGGGGGGAACCAATTTTCCAATTTTGGATGGGTGAGGGGG
GAGATGAAAATTTGAATAGTAAAGGGGGGGGAGAGGGGGGAAAACATTTG
GTGGGGGAGTGTGAAATCACTTCAACTTTATCTCAGCAACCAAGGTCATT
CCACATGATATGTGATTAGATCATGATTGAAAAATCACTAGGCATAAAGA
TTTTTTATTAAAAAGACGGTCACTGTTTTTGTTTTTATCGTTCAAAATAC
CGCTCCAGAGATAATTTTTCATCTCCAAAAGTCGATCTTTCTCTCCCCCC
CTACAAAATTACCCATTAAAGGAAATAAAGAAATATCACGAGATGGACAA
CACACTCTCTTTTCCCGGATTGGGTCCGACTCACAAATGAGTAGGAATCT
CTGTGCTAACAAGTATTGTGACTCTGAAATTACGAGCTTTAAAAGCCATG
ACTTACACACCTTGACAGATGGTGATGCAAGACCGAGAGTGTAGCATATT
TTGCGGTCCTTCGCAATGCGCAAGCACATGAATATTTTTCGAAAGTTAAG
GGTGTTTAAATTCATTCTGCAAGGGGGTCCGACAAAAAGCTTTGATAGGT
CAATTTTCCAATTTTGGATGGGTGAGGGGGGAGATGAAAATTTGAATAGT
AAAGGGGGGAGAGGGGGGCAAAAATTTGGTGGGGGGAGTGTGAAATCACT
TCAACTTTATCTCAGCAACCAAGGTCAGTCCACATGATATGTGATTAGAT
CATGATTGAAAAATTCACTAGGCATAAAAACTGAGCAGAAAAGTGAAAGT
TCAGTGTTTTAAGAATCAAAATTCAATGCTCATTCCCAAAGTGATTACTT
TTTTAGCCAGAGAGAAGTACATTTTTTTCATTTGTATTTCAGAAAGAGAA
AGTTTGATTGAGTTTTGTTTTGAGTGATATTTGAAAATGGCTGATTTTTT
TAAAAAAAGAAAGAAGAGGAAAAAGTTGTTTTGATTTTATTTAGGATTTT
AATTTTTCATTTCATTGTTGTTTTAAGTCTGCTTTTCTAAGCATGTTTGT
TTATATTAACCTATTTTCGTTCTATTTTGTCTAGTATTCCTTTTGCAGGG
AGTTTCTAAACATCGAAATGGCGACCACGACCAGCGACCACGACCGGCGA
CCAGATAAATTTGGATTATCGAGTTTATCTGCTCTCTCCACCGTAGAGAA
TGTTTAAATCAAGTCCTCCAGTATACTAAAAAGTGACCTTTGAAGTAACC
AGTCATTTTCTTGACAAAGTGACACTATTTGGAAAAAATATTGACAGTAG
GAAAAAATTGGAAAGACCAGTTTTAGAGATATGAATCTAATCAATTATTC
TATTGTCTTTATGCTGACAAAATGACTAATTTCGACAGAAATAACAATCT
CATGATGAAATACAAAGCTTCTCAAACCATTTTCAAAAAATTTTGTGCCA
CTAATTATTTTGATGCTGATAATACAAAAGGATAGAAATTGACACCATAA
TCAAGCTCCAAGAGCGTCGAAATGGTTGTTTTACGTATTTGGCACGTGGC
TTTAAATAGATGAGACAGGGGTGAGCTTAATATGATATATATTCATATTC
AAATGATTAGGATAGACACTCTACGTTGGAGAAAGGGAAAAACTCGATTA
CTCAAATTTATCTGTTCGCTGGTCGTAGTCGCCGGTCGTGGTCATCATTT
TTGGTCGACGTTTAGAAACTCCCCCTTTTGCAGCAAAATTTTATGTTTGT
GTCAGGTTGAAATTTGAGAAATTTATATGGGTATATGGGGGGAACTGATA
TTTTCAGAATTTTCTGGGGGGAAAGCAAAAAAGAGGGGGGAAACTAAAAA
ACTGAAAAGTCATAGGGGGGGGGAGAGGGGGAGATTTAAAAAAATCAAGA
ATGTGGTTGGGGGAACAAACCCAGGAGGACACTATGTTAAAAATGGTTCT
TCAATTTTTGAGACAACATTTGTTTTAGTACAAATAACTTAATATTTTCA
ATTCAAAAACTTCTTTCAGATGGCGGATAGTATAGAAACAACGGACCATC
ACGCTTCGAATATCACAGAACAAATACCTTTCGATTACTCTTTATTTGGA
CTTTCAAGTAACCGTAACAAAAGAAAACATTCACCGTTATTCAAAAGAGC
TGAAACCTGGTATTTACCACCTTATTCGGGGAAACGAAAACGGGTTACTT
TCACTGACGAAAACACCGAAACGGAAAGTTTATCTATGAACTTGGATTCG
ACAAAAGATGTAGTGTCTTCATTGGAATCAGACAAGAGTCATTCCTTAGA
ATCGAAACCGTTCTTCAAAAATGTTTCGAAATTTTTGAGGACTATTAAAG
ATAAAATTACGAAAACCTTCAAGATAAGTAATAACAACCAGGCCAAGTCT
GATTCTCTTTCGAACCATACCGAGACTAACGAACTCAAAGAAGAAACACC
TGAAGCAGGCCTCCCTCCTCCTAAACGTAAATCTAGGCGGACCTTCTATC
ACGAACATATTCCTGATGAAATAGTGGACCAGTTCGGTAAAGAAATTGGG
AAATACTGGGCTCAACGTTACCGATATTTTTCCCGATATGACGAAGGTAT
ACAGCTTGACCGCGAGGGTTGGTTTTCAGTGACACCGGNGGGAAATACTG
GGCTCAACGTTACCGATATTTTTCCCGATATGACGAAGGTATACAGCTTG
ACCGCGAGGGTTGGTTTTCAGTGACACCGGAAAAGATAGCGGAACACATT
GCGGAAAGATGTCAATCTGATGTCGTTGTGGATGCATTCTGCGGCGTCGG
TGGCAACGCTATACAGTTTGCGTTTACGTGTCATCACGTTATTGCGATTG
ATATTGATCCCGTACGTCTAGAATGCGCCCGTCACAATGCACGCGTTTAC
GGCGTCGAGGATCGTATATCGTTTATATTAGGCGATTTCTTTCAATTAGC
ACCTTACCTAAAAGCAGATGTTGTTTTCCTATCACCTCCATGGGGCGGTC
CAGATTATATCTCAGCGGACGTTTTCGATATTGAAACAATGATGTTACCG
GTGGGAGGTACGGAACTATTCCGGTATGCATCAATGATAACCGGGAATGT
GGCAATGTTCTTACCAAGGAATGTTGATGTAGAGCAAGTCATCGCATTAA
CTGAACCGGGTCGTAAAGTTGAAATCGAGAAAAACTTGTTGAACAACAAA
GTGAAAACTATCATGGTTTACTATGGTGATTTAGTATCTAATATGACTTG
ACTCGATAGTGTGTCTTTCTAGTTATTGCTCGACTCGATAAATCTCATTC
AAATTCTTTCTNCTATGGTGATTTAGTATCTAATATGACTTGACTCGATA
GTGTGTCTTTCTAGTTATTGCTCGACTCGATAAATCTCATTCAAATTCTT
TCTCCTTAAGAATTAGTTTGTTACTCTCGTGTACCCAATAGTAATAATCG
GAAGTTAAAAAATATCTTGTTGTAAATAATCTTAACCTTTCCAGCACGCT
GTTTTTTATATTTTCACGCTGTCTACGCGCAACTTTTTTTGAGAAAACGC
GGGGTTTGGGAAATTTGCCATAATTCAAGAACTAGAAATCTTTTGGCAAA
AAGTAAACTATCCCTGAAAAGCTAATTAAGTTTTGCAGCTTTTAGGTTGG
GTACAAGTTCAATTAAAGTATTCTA Coding sequence (CDS) from alignment at sc0000233:323048..329172- >TCONS_00016376 ID=TCONS_00016376|Name=TCONS_00016376|organism=Clytia hemisphaerica|type=CDS|length=5532bp|location=Sequence derived from alignment at sc0000233:323048..329172- (Clytia hemisphaerica)
ATGGCGGATAGTATAGAAACAACGGACCATCACGCTTCGAATATCACAGA
ACAAATACCTTTCGATTACTCTTTATTTGGACTTTCAAGTAACCGTAACA
AAAGAAAACATTCACCGTTATTCAAAAGAGCTGAAACCTGGTATTTACCA
CCTTATTCGGGGAAACGAAAACGGGTTACTTTCACTGACGAAAACACCGA
AACGGAAAGTTTATCTATGAACTTGGATTCGACAAAAGATGTAGTGTCTT
CATTGGAATCAGACAAGAGTCATTCCTTAGAATCGAAACCGTTCTTCAAA
AATGTTTCGAAATTTTTGAGGACTATTAAAGATAAAATTACGAAAACCTT
CAAGATAAGTAATAACAACCAGGCCAAGTCTGATTCTCTTTCGAACCATA
CCGAGACTAACGAACTCAAAGAAGAAACACCTGAAGCAGGCCTCCCTCCT
CCTAAACGTAAATCTAGGCGGACCTTCTATCACGAACATATTCCTGATGA
AATAGTGGACCAGTTCGGTAAAGAAATTGGGAAATACTGGGCTCAACGTT
ACCGATATTTTTCCCGATATGACGAAGGTATACAGCTTGACCGCGAGGGT
TGGTTTTCAGTGACACCGGNGGGAAATACTGGGCTCAACGTTACCGATAT
TTTTCCCGATATGACGAAGGTATACAGCTTGACCGCGAGGGTTGGTTTTC
AGTGAAAAGACCCCTTGTGGAAACTGGGCCAAACATCGATAATTGCGAAC
AATCTCCGAAATCAAACAAAGGAATGGAAGAACCAAATGCTTTGATATTG
ACGACTGAGAATCAAGAGATCAGTGATGACAAAACCTGCATAGCAATGAC
TGATCTCACTGAATATCAAGACAAAGCCAGGTCCGAAGAGAATGTAGAAT
CGATCGTATCAACCTTGTTAGAGGAAATGGTGACGAAAGTGGTCAAAAAC
ACAAAGAAATCTTCATCCTCAAAAAGTAAGAAGAAAACTCGGAAATATGA
AGGCGTCGGTGCATTCTTGGAGAGGCTAAATACTTCATCAACTGTTGATG
ATGATAATGATGGTGATGGTGAAACTAAAGATGTTGTTGGCGATTCAACG
CCGCTGGATCAGTTGATGGAACAAGAAGGAGGAAACTGCTCGCCTGTTTC
TGAGCAAAGTGAACATCAACCAAAAGTAACCGATGCTGAGGTAAGCCCAG
GGGACATCGAGGCGACTCTTTGAAGAATTTAACGGTTGACGATGTTGATT
GGAACGATGAAGCTTGGAATGAAATTTATCAATCCCATTACTGGCAATCT
TTCTGCTTCTACCTGGAGGAATATAAAAAAGACAACTTGAAAGAAGATGA
AAATACAGTTTATTCAAAAGAAACAGATCGGAGATGGCGGATAGTATAGA
AACAACGGACCATCACGCTTCGAATATCACAGAACAAATACCTTTCGATT
ACTCTTTATTTGGACTTTCAAGTAACCGTAACAAAAGAAAACATTCACCG
TTATTCAAAAGAGCTGAAACCTGGTATTTACCACCTTATTCGGGGAAACG
AAAACGGGTTACTTTCACTGACGAAAACACCGAAACGGAAAGTTTATCTA
TGAACTTGGATTCGACAAAAGATGTAGTGTCTTCATTGGAATCAGACAAG
AGTCATTCCTTAGAATCGAAACCGTTCTTCAAAAATGTTTCGAAATTTTT
GAGGACTATTAAAGATAAAATTACGAAAACCTTCAAGATAAGTAATAACA
ACCAGGCCAAGTCTGATTCTCTTTCGAACCATACCGAGACTAACGAACTC
AAAGAAGAAACACCTGAAGCAGGCCTCCCTCCTCCTAAACGTAAATCTAG
GCGGACCTTCTATCACGAACATATTCCTGATGAAATAGTGGACCAGTTCG
GTAAAGAAATTGGGAAATACTGGGCTCAACGTTACCGATATTTTTCCCGA
TATGACGAAGGTATACAGCTTGACCGCGAGGGTTGGTTTTCAGTGACACC
GGNGGGAAATACTGGGCTCAACGTTACCGATATTTTTCCCGATATGACGA
AGGTATACAGCTTGACCGCGAGGGTTGGTTTTCAGTGAAAAGACCCCTTG
TGGAAACTGGGCCAAACATCGATAATTGCGAACAATCTCCGAAATCAAAC
AAAGGAATGGAAGAACCAAATGCTTTGATATTGACGACTGAGAATCAAGA
GATCAGTGATGACAAAACCTGCATAGCAATGACTGATCTCACTGAATATC
AAGACAAAGCCAGGTCCGAAGAGAATGTAGAATCGATCGTATCAACCTTG
TTAGAGGAAATGGTGACGAAAGTGGTCAAAAACACAAAGAAATCTTCATC
CTCAAAAAGTAAGAAGAAAACTCGGAAATATGAAGGCGTCGGTGCATTCT
TGGAGAGGCTAAATACTTCATCAACTGTTGATGATGATAATGATGGTGAT
GGTGAAACTAAAGATGTTGTTGGCGATTCAACGCCGCTGGATCAGTTGAT
GGAACAAGAAGGAGGAAACTGCTCGCCTGTTTCTGAGCAAAGTGAACATC
AACCAAAAGTAACCGATGCTGAGGTAAGCCCAGGGGACATCGAGGCGACT
CTTTGAAGAATTTAACGGTTGACGATGTTGATTGGAACGATGAAGCTTGG
AATGAAATTTATCAATCCCATTACTGGCAATCTTTCTGCTTCTACCTGGA
GGAATATAAAAAAGACAACTTGAAAGAAGATGAAAATACAGTTTATTCAA
AAGAAACAGATCGGAGATGGCGGATAGTATAGAAACAACGGACCATCACG
CTTCGAATATCACAGAACAAATACCTTTCGATTACTCTTTATTTGGACTT
TCAAGTAACCGTAACAAAAGAAAACATTCACCGTTATTCAAAAGAGCTGA
AACCTGGTATTTACCACCTTATTCGGGGAAACGAAAACGGGTTACTTTCA
CTGACGAAAACACCGAAACGGAAAGTTTATCTATGAACTTGGATTCGACA
AAAGATGTAGTGTCTTCATTGGAATCAGACAAGAGTCATTCCTTAGAATC
GAAACCGTTCTTCAAAAATGTTTCGAAATTTTTGAGGACTATTAAAGATA
AAATTACGAAAACCTTCAAGATAAGTAATAACAACCAGGCCAAGTCTGAT
TCTCTTTCGAACCATACCGAGACTAACGAACTCAAAGAAGAAACACCTGA
AGCAGGCCTCCCTCCTCCTAAACGTAAATCTAGGCGGACCTTCTATCACG
AACATATTCCTGATGAAATAGTGGACCAGTTCGGTAAAGAAATTGGGAAA
TACTGGGCTCAACGTTACCGATATTTTTCCCGATATGACGAAGGTATACA
GCTTGACCGCGAGGGTTGGTTTTCAGTGACACCGGNGGGAAATACTGGGC
TCAACGTTACCGATATTTTTCCCGATATGACGAAGGTATACAGCTTGACC
GCGAGGGTTGGTTTTCAGTGAAAAGACCCCTTGTGGAAACTGGGCCAAAC
ATCGATAATTGCGAACAATCTCCGAAATCAAACAAAGGAATGGAAGAACC
AAATGCTTTGATATTGACGACTGAGAATCAAGAGATCAGTGATGACAAAA
CCTGCATAGCAATGACTGATCTCACTGAATATCAAGACAAAGCCAGGTCC
GAAGAGAATGTAGAATCGATCGTATCAACCTTGTTAGAGGAAATGGTGAC
GAAAGTGGTCAAAAACACAAAGAAATCTTCATCCTCAAAAAGTAAGAAGA
AAACTCGGAAATATGAAGGCGTCGGTGCATTCTTGGAGAGGCTAAATACT
TCATCAACTGTTGATGATGATAATGATGGTGATGGTGAAACTAAAGATGT
TGTTGGCGATTCAACGCCGCTGGATCAGTTGATGGAACAAGAAGGAGGAA
ACTGCTCGCCTGTTTCTGAGCAAAGTGAACATCAACCAAAAGTAACCGAT
GCTGAGGTAAGCCCAGGGGACATCGAGGCGACTCTTTGAAGAATTTAACG
GTTGACGATGTTGATTGGAACGATGAAGCTTGGAATGAAATTTATCAATC
CCATTACTGGCAATCTTTCTGCTTCTACCTGGAGGAATATAAAAAAGACA
ACTTGAAAGAAGATGAAAATACAGTTTATTCAAAAGAAACAGATCGGAGA
TGGCGGATAGTATAGAAACAACGGACCATCACGCTTCGAATATCACAGAA
CAAATACCTTTCGATTACTCTTTATTTGGACTTTCAAGTAACCGTAACAA
AAGAAAACATTCACCGTTATTCAAAAGAGCTGAAACCTGGTATTTACCAC
CTTATTCGGGGAAACGAAAACGGGTTACTTTCACTGACGAAAACACCGAA
ACGGAAAGTTTATCTATGAACTTGGATTCGACAAAAGATGTAGTGTCTTC
ATTGGAATCAGACAAGAGTCATTCCTTAGAATCGAAACCGTTCTTCAAAA
ATGTTTCGAAATTTTTGAGGACTATTAAAGATAAAATTACGAAAACCTTC
AAGATAAGTAATAACAACCAGGCCAAGTCTGATTCTCTTTCGAACCATAC
CGAGACTAACGAACTCAAAGAAGAAACACCTGAAGCAGGCCTCCCTCCTC
CTAAACGTAAATCTAGGCGGACCTTCTATCACGAACATATTCCTGATGAA
ATAGTGGACCAGTTCGGTAAAGAAATTGGGAAATACTGGGCTCAACGTTA
CCGATATTTTTCCCGATATGACGAAGGTATACAGCTTGACCGCGAGGGTT
GGTTTTCAGTGACACCGGNGGGAAATACTGGGCTCAACGTTACCGATATT
TTTCCCGATATGACGAAGGTATACAGCTTGACCGCGAGGGTTGGTTTTCA
GTGAAAAGACCCCTTGTGGAAACTGGGCCAAACATCGATAATTGCGAACA
ATCTCCGAAATCAAACAAAGGAATGGAAGAACCAAATGCTTTGATATTGA
CGACTGAGAATCAAGAGATCAGTGATGACAAAACCTGCATAGCAATGACT
GATCTCACTGAATATCAAGACAAAGCCAGGTCCGAAGAGAATGTAGAATC
GATCGTATCAACCTTGTTAGAGGAAATGGTGACGAAAGTGGTCAAAAACA
CAAAGAAATCTTCATCCTCAAAAAGTAAGAAGAAAACTCGGAAATATGAA
GGCGTCGGTGCATTCTTGGAGAGGCTAAATACTTCATCAACTGTTGATGA
TGATAATGATGGTGATGGTGAAACTAAAGATGTTGTTGGCGATTCAACGC
CGCTGGATCAGTTGATGGAACAAGAAGGAGGAAACTGCTCGCCTGTTTCT
GAGCAAAGTGAACATCAACCAAAAGTAACCGATGCTGAGGTAAGCCCAGG
GGACATCGAGGCGACTCTTTGAAGAATTTAACGGTTGACGATGTTGATTG
GAACGATGAAGCTTGGAATGAAATTTATCAATCCCATTACTGGCAATCTT
TCTGCTTCTACCTGGAGGAATATAAAAAAGACAACTTGAAAGAAGATGAA
AATACAGTTTATTCAAAAGAAACAGATCGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016376-exon-sc0000233-1575043694:328750..329172 | TCONS_00016376-exon-sc0000233-1575043694:328750..329172 | Clytia hemisphaerica | exon |
| TCONS_00016376-exon-sc0000233-1575043694:328065..328199 | TCONS_00016376-exon-sc0000233-1575043694:328065..328199 | Clytia hemisphaerica | exon |
| TCONS_00016376-exon-sc0000233-1575043694:327104..327609 | TCONS_00016376-exon-sc0000233-1575043694:327104..327609 | Clytia hemisphaerica | exon |
| TCONS_00016376-exon-sc0000233-1575043694:323048..324703 | TCONS_00016376-exon-sc0000233-1575043694:323048..324703 | Clytia hemisphaerica | exon |
| TCONS_00016376-exon-sc0000233-1510915933:328750..329172 | TCONS_00016376-exon-sc0000233-1510915933:328750..329172 | Clytia hemisphaerica | exon |
| TCONS_00016376-exon-sc0000233-1510915933:328065..328199 | TCONS_00016376-exon-sc0000233-1510915933:328065..328199 | Clytia hemisphaerica | exon |
| TCONS_00016376-exon-sc0000233-1510915933:327104..327609 | TCONS_00016376-exon-sc0000233-1510915933:327104..327609 | Clytia hemisphaerica | exon |
| TCONS_00016376-exon-sc0000233-1510915933:323048..324703 | TCONS_00016376-exon-sc0000233-1510915933:323048..324703 | Clytia hemisphaerica | exon |
| TCONS_00016376-exon-sc0000233-1491911889:328750..329172 | TCONS_00016376-exon-sc0000233-1491911889:328750..329172 | Clytia hemisphaerica | exon |
| TCONS_00016376-exon-sc0000233-1491911889:328065..328199 | TCONS_00016376-exon-sc0000233-1491911889:328065..328199 | Clytia hemisphaerica | exon |
| TCONS_00016376-exon-sc0000233-1491911889:327104..327609 | TCONS_00016376-exon-sc0000233-1491911889:327104..327609 | Clytia hemisphaerica | exon |
| TCONS_00016376-exon-sc0000233-1491911889:323048..324703 | TCONS_00016376-exon-sc0000233-1491911889:323048..324703 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000233 | supercontig | sc0000233:323048..329172 - |
Blast
BLAST of TCONS_00016376 vs. Swiss-Prot (Human)
Match: TGS1 (Trimethylguanosine synthase OS=Homo sapiens GN=TGS1 PE=1 SV=3) HSP 1 Score: 286.96 bits (733), Expect = 1.230e-82 Identity = 136/203 (67.00%), Postives = 159/203 (78.33%), Query Frame = 2
Query: 1685 GKYWAQRYRYFSRYDEGIQLDREGWFSVTPEKIAEHIAERC----QSDVVVDAFCGVGGNAIQFAFTCHHVIAIDIDPVRLECARHNARVYGVEDRISFILGDFFQLAPYLKADVVFLSPPWGGPDYISADVFDIETMMLPVGGTELFRYASMITGNVAMFLPRNVDVEQVIALTEPGRKVEIEKNLLNNKVKTIMVYYGDLV 2281
KYWAQRYR FSR+D+GI+LDREGWFSVTPEKIAEHIA R + DVVVDAFCGVGGN IQFA T VIAIDIDPV++ AR+NA VYG+ D+I FI GDF LA +LKADVVFLSPPWGGPDY +A+ FDI TMM P G E+FR + IT N+ FLPRN D++QV +L PG +VEIE+N LNNK+KTI Y+GDL+
Sbjct: 645 AKYWAQRYRLFSRFDDGIKLDREGWFSVTPEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGGPDYATAETFDIRTMMSP-DGFEIFRLSKKITNNIVYFLPRNADIDQVASLAGPGGQVEIEQNFLNNKLKTITAYFGDLI 846
The following BLAST results are available for this feature:
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