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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016329 ID=TCONS_00016329|Name=TCONS_00016329|organism=Clytia hemisphaerica|type=transcript|length=970bp
ATAGTTGACGTACATGACTCGAAAGACTTGAATAATACATTAAATAATGT
ATTGGAAACTCCCTCTTTATCTTTTGTTTTGGTACAAGGGACCAGTACGC
AATTAACATCCTTTAACAACAAAATCACTCAATTAAAGAAAATCAAACAA
GGcttaaagaaaatctttttcttgaattttgaaCGGGAATCAAACCATGT
GATGACTGCAAATGCTGGTGGCGAAGAAACTCAACAAAAAGGAGTCGACT
TGACCCTGGCAAGTCATGGACATTCTGATTTGACGACATTCAATTATGTT
TATCAGTTACCAGGTTTCACCGGTTTTAACACATTGTTACATTATATCCA
CCATTTACCTAAACACTTCTTAACAACAGACTTGTTTAAAGATCTCAGTA
AATTTTATAGTCTTGAACAGATGAAGGAAACACTGATCCGTAAGAATCCA
CAGAAATTCGGATTCTTGAAAGCATTCGCTTTGAATCCGAAATTTTATGA
AGTTTTTGTTAATGAAGAAATCAAGACGAGCATGTATGAGGAAGTTAAGT
ATACGCGAGAACTTCTTCATGCgtatttgtttgtttggaaaGATGTGTTT
TATTTAGAACGTCTTCTAGACAAGGCGTCAAACCTCTCCAACTCTCTAAT
CAACTCAAATACAGCTTTTAAAGAGAAACCATTCTGTTATTTAAGTAAAC
CAAACTGTAAACAAGGTTCAGAGCTAGTTTATTCATATTACGTTGAGCCG
AATTGGAATCGAAGTTATGGCTACCATTGCCAGAAATGCAAGTCGAATTA
CTTAAAAAATGTCTCTGGTAATACACAGTGCATCGAATGTCCTGGTTTAT
TAGCTAGTTCTGATGACCACACATTTTGCTATGATCCGTACACACCCATA
TACCTCTCACTAAGCAAATCGCCAGCTTTTCGTCTATACATTATCATGTC
CGTAATTCACGTCTCGTTGG Run BLAST on NCBI protein sequence of TCONS_00016329-protein >TCONS_00016329-protein ID=TCONS_00016329-protein|Name=TCONS_00016329-protein|organism=Clytia hemisphaerica|type=polypeptide|length=323bp
IVDVHDSKDLNNTLNNVLETPSLSFVLVQGTSTQLTSFNNKITQLKKIKQ
GLKKIFFLNFERESNHVMTANAGGEETQQKGVDLTLASHGHSDLTTFNYV
YQLPGFTGFNTLLHYIHHLPKHFLTTDLFKDLSKFYSLEQMKETLIRKNP
QKFGFLKAFALNPKFYEVFVNEEIKTSMYEEVKYTRELLHAYLFVWKDVF
YLERLLDKASNLSNSLINSNTAFKEKPFCYLSKPNCKQGSELVYSYYVEP
NWNRSYGYHCQKCKSNYLKNVSGNTQCIECPGLLASSDDHTFCYDPYTPI
YLSLSKSPAFRLYIIMSVIHVSL Run BLAST on NCBI transcript from alignment at sc0000232:81750..82719 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016329 ID=TCONS_00016329|Name=TCONS_00016329|organism=Clytia hemisphaerica|type=transcript|length=970bp|location=Sequence derived from alignment at sc0000232:81750..82719 (Clytia hemisphaerica)
CCAACGAGACGTGAATTACGGACATGATAATGTATAGACGAAAAGCTGGC
GATTTGCTTAGTGAGAGGTATATGGGTGTGTACGGATCATAGCAAAATGT
GTGGTCATCAGAACTAGCTAATAAACCAGGACATTCGATGCACTGTGTAT
TACCAGAGACATTTTTTAAGTAATTCGACTTGCATTTCTGGCAATGGTAG
CCATAACTTCGATTCCAATTCGGCTCAACGTAATATGAATAAACTAGCTC
TGAACCTTGTTTACAGTTTGGTTTACTTAAATAACAGAATGGTTTCTCTT
TAAAAGCTGTATTTGAGTTGATTAGAGAGTTGGAGAGGTTTGACGCCTTG
TCTAGAAGACGTTCTAAATAAAACACATCtttccaaacaaacaaatacGC
ATGAAGAAGTTCTCGCGTATACTTAACTTCCTCATACATGCTCGTCTTGA
TTTCTTCATTAACAAAAACTTCATAAAATTTCGGATTCAAAGCGAATGCT
TTCAAGAATCCGAATTTCTGTGGATTCTTACGGATCAGTGTTTCCTTCAT
CTGTTCAAGACTATAAAATTTACTGAGATCTTTAAACAAGTCTGTTGTTA
AGAAGTGTTTAGGTAAATGGTGGATATAATGTAACAATGTGTTAAAACCG
GTGAAACCTGGTAACTGATAAACATAATTGAATGTCGTCAAATCAGAATG
TCCATGACTTGCCAGGGTCAAGTCGACTCCTTTTTGTTGAGTTTCTTCGC
CACCAGCATTTGCAGTCATCACATGGTTTGATTCCCGttcaaaattcaag
aaaaagattttctttaagCCTTGTTTGATTTTCTTTAATTGAGTGATTTT
GTTGTTAAAGGATGTTAATTGCGTACTGGTCCCTTGTACCAAAACAAAAG
ATAAAGAGGGAGTTTCCAATACATTATTTAATGTATTATTCAAGTCTTTC
GAGTCATGTACGTCAACTAT Coding sequence (CDS) from alignment at sc0000232:81750..82719 >TCONS_00016329 ID=TCONS_00016329|Name=TCONS_00016329|organism=Clytia hemisphaerica|type=CDS|length=969bp|location=Sequence derived from alignment at sc0000232:81750..82719 (Clytia hemisphaerica)
CAACGAGACGTGAATTACGGACATGATAATGTATAGACGAAAAGCTGGCG
ATTTGCTTAGTGAGAGGTATATGGGTGTGTACGGATCATAGCAAAATGTG
TGGTCATCAGAACTAGCTAATAAACCAGGACATTCGATGCACTGTGTATT
ACCAGAGACATTTTTTAAGTAATTCGACTTGCATTTCTGGCAATGGTAGC
CATAACTTCGATTCCAATTCGGCTCAACGTAATATGAATAAACTAGCTCT
GAACCTTGTTTACAGTTTGGTTTACTTAAATAACAGAATGGTTTCTCTTT
AAAAGCTGTATTTGAGTTGATTAGAGAGTTGGAGAGGTTTGACGCCTTGT
CTAGAAGACGTTCTAAATAAAACACATCtttccaaacaaacaaatacGCA
TGAAGAAGTTCTCGCGTATACTTAACTTCCTCATACATGCTCGTCTTGAT
TTCTTCATTAACAAAAACTTCATAAAATTTCGGATTCAAAGCGAATGCTT
TCAAGAATCCGAATTTCTGTGGATTCTTACGGATCAGTGTTTCCTTCATC
TGTTCAAGACTATAAAATTTACTGAGATCTTTAAACAAGTCTGTTGTTAA
GAAGTGTTTAGGTAAATGGTGGATATAATGTAACAATGTGTTAAAACCGG
TGAAACCTGGTAACTGATAAACATAATTGAATGTCGTCAAATCAGAATGT
CCATGACTTGCCAGGGTCAAGTCGACTCCTTTTTGTTGAGTTTCTTCGCC
ACCAGCATTTGCAGTCATCACATGGTTTGATTCCCGttcaaaattcaaga
aaaagattttctttaagCCTTGTTTGATTTTCTTTAATTGAGTGATTTTG
TTGTTAAAGGATGTTAATTGCGTACTGGTCCCTTGTACCAAAACAAAAGA
TAAAGAGGGAGTTTCCAATACATTATTTAATGTATTATTCAAGTCTTTCG
AGTCATGTACGTCAACTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016329-exon-sc0000232-1491911889:81750..82719 | TCONS_00016329-exon-sc0000232-1491911889:81750..82719 | Clytia hemisphaerica | exon |
| TCONS_00016329-exon-sc0000232-1510915933:81750..82719 | TCONS_00016329-exon-sc0000232-1510915933:81750..82719 | Clytia hemisphaerica | exon |
| TCONS_00016329-exon-sc0000232-1575043694:81750..82719 | TCONS_00016329-exon-sc0000232-1575043694:81750..82719 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000232 | supercontig | sc0000232:81750..82719 . |
Blast
The following BLAST results are available for this feature:
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