TCONS_00016197 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016197
Unique NameTCONS_00016197
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2840

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016197 ID=TCONS_00016197|Name=TCONS_00016197|organism=Clytia hemisphaerica|type=transcript|length=2840bp
CTATAGGACATGGTAGTTCTTCTACTAAAACAAAATTCTTCCAACTTCGA
AAGGAGACACTAGAAGCAATGAAGCGAAAAAGGAGACCAATTATAGTGGT
GTTTATATTGTTGACATTTCTTTATTGGTTGTCTATGACAGCTTTTGTTA
ATCTAGAAACGTGGCAATCTTTGACCAGACAATTGAAATCAGTCAAAGTG
AAACTCGTTTACAAGAAAGTTCCTAGGTCTTACTTGAACCTGTTAAAAGC
CCAAATGAAGAAGAAGCAAAAAGCAAAGAAGATAGTCGTAGATCGCTGTC
CTCACCCTACACTACCTGCAAAAATGAAATCAGAAGGTAGTAACCGACAA
GATATAACATGTAAACCCAATACGTTGACTGAATCCGCTTGTAATTACGT
CAAATCGAAGTATCATTATGATTATCACACTTACAAATGTGGAAAAGGTG
AGGGTGAACCAACATTGAACATCTGTACTTTCCAGGAACAATCAACCACA
TTCAAATGCAATCATAAAGCTTGTGGGGCAAAGTTCAACGGATCAATTTA
CATACAGTTGTTTGATACCAATCGCACAGGCTGGCATTACACCATTAAAC
CTGGTTACAACGATTCAGAATCTCTTGAAAGAGCTGTTCTCAAATTCGCC
AAACGATCTTCAAAGTTTGCTGATGATTTCATGTTTTTGGTTTGCCAGGG
AACAAACCAATTGCAGCTTTTACATTTCGATGCAACACACTTCAAAGAAC
CAAAGGCGAACAGAAACGATAAAAATTCGCCACAAACCAAGAACAAAACC
AACATCAATGTTATATGGTTGGATTCAGTATCTCGTCgccatttctttct
ttctttaccAAAGACCATAAATCAAATCAGGGAAATCAATACGAACGAAT
CAACCAAAGCTGAGGTCATAGATTTTGAACTGATGCAAGCAGTTCACGGG
CACACACACTTGAATACCTTCCCGTTCTTTGAAGGGCGTGTCTTACCGGA
GACGATGAGCGGTAAACAGAAATCGAACACACTCCCAAACATGaataaac
ttttcaattttatgaGGAGCTCTGGATATAAGAATCTCTACCAAGAAGAC
ATGTGTTACAAAGGTTTTTATGGGTTAAACGAAATGTTGAATGGCGGAAA
AACGTGGAAAAAGCTCtcaaagaaattgaagaatCTTCAAATTGACGATT
TAGGTATCACTATGGCATCATGCAAGATTATTCATTTTTATAAATCCAAA
CAAATGCATACCTTCAACATGCGTTCGTTGCCTCAGATATGCTACAATGG
CATCAATCTCAATACGTATTTCCTACAGCACATTACgtcaaaattgaaga
aaaccACGCATAATTTGTTCAGTTTTACCATGTTAAGTATTCCTCATGAT
CAAATCGGTCGGCGCATTCAAGGCATCGACCAAAGCGTTGCCGAATTTTT
CTCGGTAATGAGTCGAATGAAAAACACAATCACTTTCTTTTTTGCCGATC
ATGGGAACTCATACACGCCTTATATCTATTCAGAATTAGATGCCAGATAT
GAACAGCACCATCCACACTTCTTTGCCATCCTGCCGGAAAATGTAGTAGA
GAGACTGGGCCCGAAATCCCTTGACACATTACGTCAGAACCGTCTCCGTT
TAACGAGTATTATGGATATTCATCATACCATCAAACATATTGCCAACTCC
TCACATCCACACAAAGGGCTATTTGAAGAGATTTCACCTAATCGAACATG
TGATGACATCGAACTAAACACCCCTAATTATTGTGTTTGCCAGGGCTGGG
ATTCTCCAATGACTAACACATCTGGTGACTGGAAATTTGCCGAATTTGCA
GTCGGTTATCTTAATAACATGATTTCTAGCGCGTCACCAAGAGGCCATTG
TAAATGGTTACTACCTACAAGTTTTGAGAATCTTAATACCAGGAAACACG
ATACGATTATCCAACTGACTATGGATATTGTAACAAATCCAGGGCTCGGA
TCCAcgaataaagaagaaaaattttcagttcAAGTCCAATACGATATTCG
TAAAGGCTTGAATTCGTTTCATACACGATTTTTAACTTCTAACCGAATAT
CGAAATATGGAGGTTATGCCAAATGTAGTGATACAAGTGAAAAGGATCTT
CATTTGTGTGTTTGTGATTTGATTGAAAGGACATCCAAATCTTCTTTACT
ATTGACCATAACTCCTTCGCTTGAGTCAGTAGATTTGAAATCTCATAAAT
CATCCCTCTCAATAACAGGGGAAAACAGTGCTTCTTCCAAGAAACTATCG
AACACTAGCGATAAACTTTTCNGGAAAACAGTCTTTCTTCCAAGAGACTA
TTCAACACTAGCGATAAATCTTTACTCGACTCTAGCAATGGGTTTGAAAA
ATCGATTAATATATCTTCGGTTCTGACCAACTCTAACCTCACGCTAAAAT
CTCTGAATGTGAAGAGCATCGCACCTAAGCCATATGATCTTGCTAAATTG
AGAACTGCCAAAGAATTCAAAATCCAATTCAATCATAAAGAGATGATATC
AAAAATCATGATTGATATCAACAAAACTAAAGGAAATGAAAGAGAAATAC
ATCCGCTAGACTTAATACAAAGGAGTGTATTTGAACGCAAGACTCCAGTT
TCAACCACATTTGAAGTGATTAATTATTCACATAATCAAACTTTTGAAGT
AACCATTCTTTTTTATGGGCGTAAACAGGCGAAGCTGATGAATACGCGCC
CGTGTAAAGGAGTGGCGAAACCGAAATCCATGAGATATCTTTGCACTACC
GGCAAAGGAATACCGAATTATAAAGTTAACGTGAAaactt
Run BLAST on NCBI

protein sequence of TCONS_00016197-protein

>TCONS_00016197-protein ID=TCONS_00016197-protein|Name=TCONS_00016197-protein|organism=Clytia hemisphaerica|type=polypeptide|length=807bp
IGHGSSSTKTKFFQLRKETLEAMKRKRRPIIVVFILLTFLYWLSMTAFVN
LETWQSLTRQLKSVKVKLVYKKVPRSYLNLLKAQMKKKQKAKKIVVDRCP
HPTLPAKMKSEGSNRQDITCKPNTLTESACNYVKSKYHYDYHTYKCGKGE
GEPTLNICTFQEQSTTFKCNHKACGAKFNGSIYIQLFDTNRTGWHYTIKP
GYNDSESLERAVLKFAKRSSKFADDFMFLVCQGTNQLQLLHFDATHFKEP
KANRNDKNSPQTKNKTNINVIWLDSVSRRHFFLSLPKTINQIREINTNES
TKAEVIDFELMQAVHGHTHLNTFPFFEGRVLPETMSGKQKSNTLPNMNKL
FNFMRSSGYKNLYQEDMCYKGFYGLNEMLNGGKTWKKLSKKLKNLQIDDL
GITMASCKIIHFYKSKQMHTFNMRSLPQICYNGINLNTYFLQHITSKLKK
TTHNLFSFTMLSIPHDQIGRRIQGIDQSVAEFFSVMSRMKNTITFFFADH
GNSYTPYIYSELDARYEQHHPHFFAILPENVVERLGPKSLDTLRQNRLRL
TSIMDIHHTIKHIANSSHPHKGLFEEISPNRTCDDIELNTPNYCVCQGWD
SPMTNTSGDWKFAEFAVGYLNNMISSASPRGHCKWLLPTSFENLNTRKHD
TIIQLTMDIVTNPGLGSTNKEEKFSVQVQYDIRKGLNSFHTRFLTSNRIS
KYGGYAKCSDTSEKDLHLCVCDLIERTSKSSLLLTITPSLESVDLKSHKS
SLSITGENSASSKKLSNTSDKLFXKTVFLPRDYSTLAINLYSTLAMGLKN
RLIYLRF
Run BLAST on NCBI

transcript from alignment at sc0000231:102271..105560+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016197 ID=TCONS_00016197|Name=TCONS_00016197|organism=Clytia hemisphaerica|type=transcript|length=3290bp|location=Sequence derived from alignment at sc0000231:102271..105560+ (Clytia hemisphaerica)
CTATAGGACATGGTAGTTCTTCTACTAAAACAAAATTCTTCCAACTTCGA AAGGAGACACTAGAAGCAATGAAGCGAAAAAGGAGACCAATTATAGTGGT GTTTATATTGTTGACATTTCTTTATTGGTTGTCTATGACAGCTTTTGTTA ATCTAGAAACGTGGCAATCTTTGACCAGACAATTGAAATCAGTCAAAGTG AAACTCGTTTACAAGAAAGTTCCTAGGTCTTACTTGAACCTGTTAAAAGC CCAAATGAAGAAGAAGCAAAAAGCAAAGAAGATAGTCGTAGATCGCTGTC CTCACCCTACACTACCTGCAAAAATGAAATCAGAAGGTAGTAACCGACAA GATATAACATGTAAACCCAATACGTTGACTGAATCCGCTTGTAATTACGT CAAATCGAAGTATCATTATGATTATCACACTTACAAATGTGGAAAAGGTG AGGGTGAACCAACATTGAACATCTGTACTTTCCAGGAACAATCAACCACA TTCAAATGCAATCATAAAGCTTGTGGGGCAAAGTTCAACGGATCAATTTA CATACAGTTGTTTGATACCAATCGCACAGGCTGGCATTACACCATTAAAC CTGGTTACAACGATTCAGAATCTCTTGAAAGAGCTGTTCTCAAATTCGCC AAACGATCTTCAAAGTTTGCTGATGATTTCATGTTTTTGGTTTGCCAGGG AACAAACCAATTGCAGCTTTTACATTTCGATGCAACACACTTCAAAGAAC CAAAGGCGAACAGAAACGATAAAAATTCGCCACAAACCAAGAACAAAACC AACATCAATGTTATATGGTTGGATTCAGTATCTCGTCgccatttctttct ttctttaccAAAGACCATAAATCAAATCAGGGAAATCAATACGAACGAAT CAACCAAAGCTGAGGTCATAGATTTTGAACTGATGCAAGCAGTTCACGGG CACACACACTTGAATACCTTCCCGTTCTTTGAAGGGCGTGTCTTACCGGA GACGATGAGCGGTAAACAGAAATCGAACACACTCCCAAACATGaataaac ttttcaattttatgaGGAGCTCTGGATATAAGAATCTCTACCAAGAAGAC ATGTGTTACAAAGGTTTTTATGGGTTAAACGAAATGTTGAATGGCGGAAA AACGTGGAAAAAGCTCtcaaagaaattgaagaatCTTCAAATTGACGATT TAGGTATGAAGCACTTCACACATCTCATTATCATTTACAAATATACCCCC TCTTTTTGCCCAACCAACccccttttatttgaaatttccacAAGCCCCCT CTTCTTCTCAAACCCCTGTTTTTTCAAGGGAGGGAGGGTGTCAGAACCTT GATTCCCTGGACGGCAGCTAAGATCGATAAACACCCTACGACTGAACCAt gtaccttaagagaagaaagcTTGGTGGATAGAAAATTCGGTGGGCTAGGT GAATAcggccaaaattttccaaattaggTTCACGCGAAATTGATTTCCCG TcaactttaatttttcaagccatCTGCAACATTGTATTCCCTctgtaaaa acttttttgcccACCAAACTATATTCCCGTTGAAGTTTCTCCCCATAACG TATTATAGCAGCTtagatataaaatgaaaatattttttgtttattctttt aAGGTATCACTATGGCATCATGCAAGATTATTCATTTTTATAAATCCAAA CAAATGCATACCTTCAACATGCGTTCGTTGCCTCAGATATGCTACAATGG CATCAATCTCAATACGTATTTCCTACAGCACATTACgtcaaaattgaaga aaaccACGCATAATTTGTTCAGTTTTACCATGTTAAGTATTCCTCATGAT CAAATCGGTCGGCGCATTCAAGGCATCGACCAAAGCGTTGCCGAATTTTT CTCGGTAATGAGTCGAATGAAAAACACAATCACTTTCTTTTTTGCCGATC ATGGGAACTCATACACGCCTTATATCTATTCAGAATTAGATGCCAGATAT GAACAGCACCATCCACACTTCTTTGCCATCCTGCCGGAAAATGTAGTAGA GAGACTGGGCCCGAAATCCCTTGACACATTACGTCAGAACCGTCTCCGTT TAACGAGTATTATGGATATTCATCATACCATCAAACATATTGCCAACTCC TCACATCCACACAAAGGGCTATTTGAAGAGATTTCACCTAATCGAACATG TGATGACATCGAACTAAACACCCCTAATTATTGTGTTTGCCAGGGCTGGG ATTCTCCAATGACTAACACATCTGGTGACTGGAAATTTGCCGAATTTGCA GTCGGTTATCTTAATAACATGATTTCTAGCGCGTCACCAAGAGGCCATTG TAAATGGTTACTACCTACAAGTTTTGAGAATCTTAATACCAGGAAACACG ATACGATTATCCAACTGACTATGGATATTGTAACAAATCCAGGGCTCGGA TCCAcgaataaagaagaaaaattttcagttcAAGTCCAATACGATATTCG TAAAGGCTTGAATTCGTTTCATACACGATTTTTAACTTCTAACCGAATAT CGAAATATGGAGGTTATGCCAAATGTAGTGATACAAGTGAAAAGGATCTT CATTTGTGTGTTTGTGATTTGATTGAAAGGACATCCAAATCTTCTTTACT ATTGACCATAACTCCTTCGCTTGAGTCAGTAGATTTGAAATCTCATAAAT CATCCCTCTCAATAACAGGGGAAAACAGTGCTTCTTCCAAGAAACTATCG AACACTAGCGATAAACTTTTCNGGAAAACAGTCTTTCTTCCAAGAGACTA TTCAACACTAGCGATAAATCTTTACTCGACTCTAGCAATGGGTTTGAAAA ATCGATTAATATATCTTCGGTTCTGACCAACTCTAACCTCACGCTAAAAT CTCTGAATGTGAAGAGCATCGCACCTAAGCCATATGATCTTGCTAAATTG AGAACTGCCAAAGAATTCAAAATCCAATTCAATCATAAAGAGATGATATC AAAAATCATGATTGATATCAACAAAACTAAAGGAAATGAAAGAGAAATAC ATCCGCTAGACTTAATACAAAGGAGTGTATTTGAACGCAAGACTCCAGTT TCAACCACATTTGAAGTGATTAATTATTCACATAATCAAACTTTTGAAGT AACCATTCTTTTTTATGGGCGTAAACAGGCGAAGCTGATGAATACGCGCC CGTGTAAAGGAGTGGCGAAACCGAAATCCATGAGATATCTTTGCACTACC GGCAAAGGAATACCGAATTATAAAGTTAACGTGAAaactt

Coding sequence (CDS) from alignment at sc0000231:102271..105560+

>TCONS_00016197 ID=TCONS_00016197|Name=TCONS_00016197|organism=Clytia hemisphaerica|type=CDS|length=4848bp|location=Sequence derived from alignment at sc0000231:102271..105560+ (Clytia hemisphaerica)
ATAGGACATGGTAGTTCTTCTACTAAAACAAAATTCTTCCAACTTCGAAA
GGAGACACTAGAAGCAATGAAGCGAAAAAGGAGACCAATTATAGTGGTGT
TTATATTGTTGACATTTCTTTATTGGTTGTCTATGACAGCTTTTGTTAAT
CTAGAAACGTGGCAATCTTTGACCAGACAATTGAAATCAGTCAAAGTGAA
ACTCGTTTACAAGAAAGTTCCTAGGTCTTACTTGAACCTGTTAAAAGCCC
AAATGAAGAAGAAGCAAAAAGCAAAGAAGATAGTCGTAGATCGCTGTCCT
CACCCTACACTACCTGCAAAAATGAAATCAGAAGGTAGTAACCGACAAGA
TATAACATGTAAACCCAATACGTTGACTGAATCCGCTTGTAATTACGTCA
AATCGAAGTATCATTATGATTATCACACTTACAAATGTGGAAAAGGTGAG
GGTGAACCAACATTGAACATCTGTACTTTCCAGGAACAATCAACCACATT
CAAATGCAATCATAAAGCTTGTGGGGCAAAGTTCAACGGATCAATTTACA
TACAGTTGTTTGATACCAATCGCACAGGCTGGCATTACACCATTAAACCT
GGTTACAACGATTCAGAATCTCTTGAAAGAGCTGTTCTCAAATTCGCCAA
ACGATCTTCAAAGTTTGCTGATGATTTCATGTTTTTGGTTTGCCAGGGAA
CAAACCAATTGCAGCTTTTACATTTCGATGCAACACACTTCAAAGAACCA
AAGGCGAACAGAAACGATAAAAATTCGCCACAAACCAAGAACAAAACCAA
CATCAATGTTATATGGTTGGATTCAGTATCTCGTCgccatttctttcttt
ctttaccAAAGACCATAAATCAAATCAGGGAAATCAATACGAACGAATCA
ACCAAAGCTGAGGTCATAGATTTTGAACTGATGCAAGCAGTTCACGGGCA
CACACACTTGAATACCTTCCCGTTCTTTGAAGGGCGTGTCTTACCGGAGA
CGATGAGCGGTAAACAGAAATCGAACACACTCCCAAACATGaataaactt
ttcaattttatgaGGAGCTCTGGATATAAGAATCTCTACCAAGAAGACAT
GTGTTACAAAGGTTTTTATGGGTTAAACGAAATGTTGAATGGCGGAAAAA
CGTGGAAAAAGCTCtcaaagaaattgaagaatCTTCAAATTGACGATTTA
GGTATCACTATGGCATCATGCAAGATTATTCATTTTTATAAATCCAAACA
AATGCATACCTTCAACATGCGTTCGTTGCCTCAGATATGCTACAATGGCA
TCAATCTCAATACGTATTTCCTACAGCACATTACgtcaaaattgaagaaa
accACGCATAATTTGTTCAGTTTTACCATGTTAAGTATTCCTCATGATCA
AATCGGTCGGCGCATTCAAGGCATCGACCAAAGCGTTGCCGAATTTTTCT
CGGTAATGAGTCGAATGAAAAACACAATCACTTTCTTTTTTGCCGATCAT
GGGAACTCATACACGCCTTATATCTATTCAGAATTAGATGCCAGATATGA
ACAGCACCATCCACACTTCTTTGCCATCCTGCCGGAAAATGTAGTAGAGA
GACTGGGCCCGAAATCCCTTGACACATTACGTCAGAACCGTCTCCGTTTA
ACGAGTATTATGGATATTCATCATACCATCAAACATATTGCCAACTCCTC
ACATCCACACAAAGGGCTATTTGAAGAGATTTCACCTAATCGAACATGTG
ATGACATCGAACTAAACACCCCTAATTATTGTGTTTGCCAGGGCTGGGAT
TCTCCAATGACTAACACATCTGGTGACTGGAAATTTGCCGAATTTGCAGT
CGGTTATCTTAATAACATGATTTCTAGCGCGTCACCAAGAGGCCATTGTA
AATGGTTACTACCTACAAGTTTTGAGAATCTTAATACCAGGAAACACGAT
ACGATTATCCAACTGACTATGGATATTGTAACAAATCCAGGGCTCGGATC
CAcgaataaagaagaaaaattttcagttcAAGTCCAATACGATATTCGTA
AAGGCTTGAATTCGTTTCATACACGATTTTTAACTTCTAACCGAATATCG
AAATATGGAGGTTATGCCAAATGTAGTGATACAAGTGAAAAGGATCTTCA
TTTGTGTGTTTGTGATTTGATTGAAAGGACATCCAAATCTTCTTTACTAT
TGACCATAACTCCTTCGCTTGAGTCAGTAGATTTGAAATCTCATAAATCA
TCCCTCTCAATAACAGGGGAAAACAGTGCTTCTTCCAAGAAACTATCGAA
CACTAGCGATAAACTTTTCNGGAAAACAGTCTTTCTTCCAAGAGACTATT
CAACACTAGCGATAAATCTTTACTCGACTCTAGCAATGGGTTTGAAAAAT
CGATTAATATATCTTCGGTTCTGAATAGGACATGGTAGTTCTTCTACTAA
AACAAAATTCTTCCAACTTCGAAAGGAGACACTAGAAGCAATGAAGCGAA
AAAGGAGACCAATTATAGTGGTGTTTATATTGTTGACATTTCTTTATTGG
TTGTCTATGACAGCTTTTGTTAATCTAGAAACGTGGCAATCTTTGACCAG
ACAATTGAAATCAGTCAAAGTGAAACTCGTTTACAAGAAAGTTCCTAGGT
CTTACTTGAACCTGTTAAAAGCCCAAATGAAGAAGAAGCAAAAAGCAAAG
AAGATAGTCGTAGATCGCTGTCCTCACCCTACACTACCTGCAAAAATGAA
ATCAGAAGGTAGTAACCGACAAGATATAACATGTAAACCCAATACGTTGA
CTGAATCCGCTTGTAATTACGTCAAATCGAAGTATCATTATGATTATCAC
ACTTACAAATGTGGAAAAGGTGAGGGTGAACCAACATTGAACATCTGTAC
TTTCCAGGAACAATCAACCACATTCAAATGCAATCATAAAGCTTGTGGGG
CAAAGTTCAACGGATCAATTTACATACAGTTGTTTGATACCAATCGCACA
GGCTGGCATTACACCATTAAACCTGGTTACAACGATTCAGAATCTCTTGA
AAGAGCTGTTCTCAAATTCGCCAAACGATCTTCAAAGTTTGCTGATGATT
TCATGTTTTTGGTTTGCCAGGGAACAAACCAATTGCAGCTTTTACATTTC
GATGCAACACACTTCAAAGAACCAAAGGCGAACAGAAACGATAAAAATTC
GCCACAAACCAAGAACAAAACCAACATCAATGTTATATGGTTGGATTCAG
TATCTCGTCgccatttctttctttctttaccAAAGACCATAAATCAAATC
AGGGAAATCAATACGAACGAATCAACCAAAGCTGAGGTCATAGATTTTGA
ACTGATGCAAGCAGTTCACGGGCACACACACTTGAATACCTTCCCGTTCT
TTGAAGGGCGTGTCTTACCGGAGACGATGAGCGGTAAACAGAAATCGAAC
ACACTCCCAAACATGaataaacttttcaattttatgaGGAGCTCTGGATA
TAAGAATCTCTACCAAGAAGACATGTGTTACAAAGGTTTTTATGGGTTAA
ACGAAATGTTGAATGGCGGAAAAACGTGGAAAAAGCTCtcaaagaaattg
aagaatCTTCAAATTGACGATTTAGGTATCACTATGGCATCATGCAAGAT
TATTCATTTTTATAAATCCAAACAAATGCATACCTTCAACATGCGTTCGT
TGCCTCAGATATGCTACAATGGCATCAATCTCAATACGTATTTCCTACAG
CACATTACgtcaaaattgaagaaaaccACGCATAATTTGTTCAGTTTTAC
CATGTTAAGTATTCCTCATGATCAAATCGGTCGGCGCATTCAAGGCATCG
ACCAAAGCGTTGCCGAATTTTTCTCGGTAATGAGTCGAATGAAAAACACA
ATCACTTTCTTTTTTGCCGATCATGGGAACTCATACACGCCTTATATCTA
TTCAGAATTAGATGCCAGATATGAACAGCACCATCCACACTTCTTTGCCA
TCCTGCCGGAAAATGTAGTAGAGAGACTGGGCCCGAAATCCCTTGACACA
TTACGTCAGAACCGTCTCCGTTTAACGAGTATTATGGATATTCATCATAC
CATCAAACATATTGCCAACTCCTCACATCCACACAAAGGGCTATTTGAAG
AGATTTCACCTAATCGAACATGTGATGACATCGAACTAAACACCCCTAAT
TATTGTGTTTGCCAGGGCTGGGATTCTCCAATGACTAACACATCTGGTGA
CTGGAAATTTGCCGAATTTGCAGTCGGTTATCTTAATAACATGATTTCTA
GCGCGTCACCAAGAGGCCATTGTAAATGGTTACTACCTACAAGTTTTGAG
AATCTTAATACCAGGAAACACGATACGATTATCCAACTGACTATGGATAT
TGTAACAAATCCAGGGCTCGGATCCAcgaataaagaagaaaaattttcag
ttcAAGTCCAATACGATATTCGTAAAGGCTTGAATTCGTTTCATACACGA
TTTTTAACTTCTAACCGAATATCGAAATATGGAGGTTATGCCAAATGTAG
TGATACAAGTGAAAAGGATCTTCATTTGTGTGTTTGTGATTTGATTGAAA
GGACATCCAAATCTTCTTTACTATTGACCATAACTCCTTCGCTTGAGTCA
GTAGATTTGAAATCTCATAAATCATCCCTCTCAATAACAGGGGAAAACAG
TGCTTCTTCCAAGAAACTATCGAACACTAGCGATAAACTTTTCNGGAAAA
CAGTCTTTCTTCCAAGAGACTATTCAACACTAGCGATAAATCTTTACTCG
ACTCTAGCAATGGGTTTGAAAAATCGATTAATATATCTTCGGTTCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009051XLOC_009051Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016197-proteinTCONS_00016197-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016197-exon-sc0000231-1491911889:102271..103473TCONS_00016197-exon-sc0000231-1491911889:102271..103473Clytia hemisphaericaexon
TCONS_00016197-exon-sc0000231-1510915933:102271..103473TCONS_00016197-exon-sc0000231-1510915933:102271..103473Clytia hemisphaericaexon
TCONS_00016197-exon-sc0000231-1575043694:102271..103473TCONS_00016197-exon-sc0000231-1575043694:102271..103473Clytia hemisphaericaexon
TCONS_00016197-exon-sc0000231-1491911889:103924..105560TCONS_00016197-exon-sc0000231-1491911889:103924..105560Clytia hemisphaericaexon
TCONS_00016197-exon-sc0000231-1510915933:103924..105560TCONS_00016197-exon-sc0000231-1510915933:103924..105560Clytia hemisphaericaexon
TCONS_00016197-exon-sc0000231-1575043694:103924..105560TCONS_00016197-exon-sc0000231-1575043694:103924..105560Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000231supercontigsc0000231:102271..105560 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.161814 0.184093 0.442768 0.477991 0.163662 0.100588 0.190701 0.243453 0.272715 0.140751 0.450833 0.233496 2.21513 1.87201 1.1562 1.37225 0.698471 0.798914 0.9604 0.689993 1.08212 0.915736 0.448371 0.759043 1.31747 2.23534 0.425269 0.0986648 0.0299335 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR017849Alkaline_Pase-like_a/b/a
IPR004245DUF229
IPR017850Alkaline_phosphatase_core
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016197 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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