TCONS_00016125 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016125
Unique NameTCONS_00016125
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1507

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016125 ID=TCONS_00016125|Name=TCONS_00016125|organism=Clytia hemisphaerica|type=transcript|length=1507bp
GTTTTTTTACCCGTCTCAGACCTCTaatttaaccaatcaaatcgcTTTGT
GTGCTTCTTTTCCGAGAACTACAATGTGTACAAATTTCAGTGTGGTGAGT
GATAGAAAAACGATGGTTTTTTACAAAGTATCCAAGCGAAATAAGAATCA
TTTGTTGGTACAGGTAGTTGGTAGTGGCATGGGCTCTTCATTACAGTTTA
TTCATATTCCAACACCTTCAACAGTATCTTTCAATTATTTTCTGAAAGGA
AACTTCAGCAATGGCAGTAGCTGCAAATTTCTACGATACGGGTGTTGTTT
ATGGTGACCAAAAGCAGCCTGGCAATGAAGAAATTGATTATGACTTTGAA
CTAGATGGGCAAAAAGTTGATGAATATTATTGTTTAATATGTTTCCTCCT
ACTGAGAGATATTGCGCAGATGCCTTGCAAACACATGCTTTGTAAGCATT
GTCTAGATGACTGGGGAAAATACATTGCTGAGCTATCATGTCCAAAGTGC
AAAGAAAGATTTCATCCAAATCAGGTCACCTCAAATGAACCATTGGATAA
AATAATAAAGAATTCCTTGAGGGTGAAATGCAAGAGTGCCGACGAATGTA
GCTGGATTGGAACAATTTCAGAATATATAGAGGTTCATTCCAAACGATGC
CACTTCTTTGAGTTGAAATGTATTTTTGTTGGCTGCAATAAAAAGTTAAA
GAGAGTCAGCTTATCTTCTCATCAAACTGACTGCCAACATCGTCCAGACT
GCAGCTACTGTAACCAGTTGTTATTAAAAACccctttaaagGATCATTAT
GCTATATGTCCAAAATATCCAGTGGATTGTCCTAACGGATGTTGTATTGT
ACTTCAACAGAGTCAGGTTGAATATCACACTCAACATGAGTGTAACAATA
GAGTTGTGCCATGTGGTTTTGTAAGAATCGGCTGTCGAGAAGAGATGAAA
CAGTCAGACCTGTTGTCACACTTTGATACCAATATACATTCCCACATGAA
ACTCATGTTCATTGAAATGgatcaaatgaaaaagaagtttgaaagtGATC
TCAAGTCAACAACACAAAAGGTGGAAAAACTGCAAAACAGTGAAGATCTA
CTGAATGCGACCATAAAAACTTTACAGACAGAACTAAGCACTACCAAAAC
AAAACTTGCTACCGCTGAAAAGAACATTGAAGAGCTTTCTTCAAAAGgtG
CAGCCACTTATCAGCCTGTCCAACTCCAAGCACAACCAGTGCAACAAAAT
GTGCAACAAAATATTCCGCAACAGCACCAGCAGCATCAACAACAAAAGAA
TACTCAAGTTAAAATGTCTGCTCCTGCAACTCCCACACCTGCATCACAAT
CAATACCAGTTGATAGTGATGAAAAACTGAAACAGAATAAGGCTAATGCA
GAGTTTGCGGCAAAAGTTGCTGCCCAAGTTGCTGCAAGACaggtaagaac
aatttttttgtttttaagtacacactaaattaaatttagatTGAACTGAT
AAATCCT
Run BLAST on NCBI

protein sequence of TCONS_00016125-protein

>TCONS_00016125-protein ID=TCONS_00016125-protein|Name=TCONS_00016125-protein|organism=Clytia hemisphaerica|type=polypeptide|length=405bp
MAVAANFYDTGVVYGDQKQPGNEEIDYDFELDGQKVDEYYCLICFLLLRD
IAQMPCKHMLCKHCLDDWGKYIAELSCPKCKERFHPNQVTSNEPLDKIIK
NSLRVKCKSADECSWIGTISEYIEVHSKRCHFFELKCIFVGCNKKLKRVS
LSSHQTDCQHRPDCSYCNQLLLKTPLKDHYAICPKYPVDCPNGCCIVLQQ
SQVEYHTQHECNNRVVPCGFVRIGCREEMKQSDLLSHFDTNIHSHMKLMF
IEMDQMKKKFESDLKSTTQKVEKLQNSEDLLNATIKTLQTELSTTKTKLA
TAEKNIEELSSKGAATYQPVQLQAQPVQQNVQQNIPQQHQQHQQQKNTQV
KMSAPATPTPASQSIPVDSDEKLKQNKANAEFAAKVAAQVAARQVRTIFL
FLSTH
Run BLAST on NCBI

transcript from alignment at sc0000226:148988..157866-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016125 ID=TCONS_00016125|Name=TCONS_00016125|organism=Clytia hemisphaerica|type=transcript|length=8879bp|location=Sequence derived from alignment at sc0000226:148988..157866- (Clytia hemisphaerica)
GTTTTTTTACCCGTCTCAGACCTCTAATTTAACCAATCAAATCGCTTTGT
GTGCTTCTTTTCCGAGAACTACAATGTGTACAAATTTCAGTGTGGTGAGT
GATAGAAAAACGATGGTTTTTTACAAAGTATCCAAGCGAAATAAGAATCA
TTTGTTGGTACAGGTAGTTGGTAGTGGCATGGGCTCTTCATTACAGTTTA
TTCATATTCCAACACCTTCAACAGTATCTTTCAATTATTTTCTGAAAGGA
AACTTCAGCAATGGCAGTAGCTGCAAATTTCTACGATACGGGTGTTGTTT
ATGGTGACCAAAAGCAGCCTGGCAATGAAGAAATTGATTATGACTTTGAA
CTAGATGGGCAAAAAGTTGATGAATATTATTGTTTAATATGTTTCCTCCT
ACTGAGAGATATTGCGCAGATGCCTTGCAAACACATGCTTTGTAAGCATT
GTCTAGATGACTGGGGAAAATAGTAAGCTCTTTTATTGGTCTTTTATTTA
TTAGGCCGTTCGTAAAAAATTGTTTGGTTCCTGTCACCCGACCGACCGTG
ATTTCTACTGAAAAATTATAGTCGGAGAGTCGGAAACCATTTTTCCTGAC
AGCTGAAACTCCACCATCACCCTCCATGTTTTTTTTTTGAGAGAAAGAGC
ACACGCTAATCTCGCCCAAAAAAACAATTCGAAACCCGTTAATTCTGTTT
TTTCCCGATTTTCAAGTCCGATTTTTCATTGCGGACCATATCAGCCTAGA
CTAAAGGCCGGTCTCCACTTGCGCGCGCTGCAATCGCACTTTTTGGCTTC
AATCCTTTTTGCTTGGAAAAAAGATTACGTCATAAAAATGTAGCGCGCGC
ACGAAAAAAAAGTTGAACACATTTCAACTTTTTTCAACCATTACGTCAGA
TCGCGCCAATGGAGTTGCTTCATTTTTCTTTTGACCAATAGCATGGAAGC
TTTTCTCGAAAAGTGCGATTGAAGCGCGCGTAAGTGGAGATCGGCCTTAA
TGTTAATTTTTCTTTCAGAAAAAAGACTATAATTTGTTTACCTTTATTCC
TGCAGCTTCCCAACATCCAAGCTCTCAAACATCACAAGCCAAATGAAATT
ACTTTCGATTTCCCGTAGAAATTATGCAATGAAAAATCCGGGGGTCGAAG
AATGAAGACTTTTTATTTCCGAACAAGTTATCTTTGCTTATANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTTTTCAATATATTTG
CTAAATATAATGTTTGATTACAAAAATACTTTACACTGTATTTAAAGTTT
GAAAAAGTCGATTCTACTATTCTACTTAGCTCTTTGTTTCCATGTCTAAC
CCCCGTCTCAAAAGAAGTCCCAGAATCCCGAGATTTTTGCAGTCGGGCGT
TCAAAACAAAGGCGTTTTTATTTTCCGCCCACTTACGAATTTTTCTTTAA
TAATAGGCATTTAAAATATCAAATTTAAAAATAATAGTATAAAACCTTAA
TTTCTACCGTATAGTATTTCTTCTAGAACGAAAAAACAAAATACATTAGA
AAAAAAAAGAATTTACGAGTGTTATCAAGCCACCCAAAATGAACTTTCAT
TTGTCCGCGTCATCGAATTGTTGTATACGTCACGATCTATTGTCAACCAT
TGTCCAATCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCCAAATAAAG
ATTTTTTCTATTGTTCTTGCTCGATTGCCTCTAACGATAAGTTCCGTAGT
TATGAGGTTATCGAGACAAAATGTGACGAATTTGCGTGGAAACGAAATTT
AACATTAGTCTAGGCTGCATATGGAAGCATCAAAACAAATCAGCGGAGCT
ATTGTAAAGTGAAAAAGAGGCTTTTAGGGCGATCAAACGTTCGTTTTTCT
AAGGAAAATTCCACCCTCTTGGACTGTTTTTCGGTCAAACAGAAAATATT
TTTCGCCCGACCGACCGACCGACCGACCGATGGTTGGAATGACGGGAACC
ATGGGATTTTTTACGAACGGCCTTATGGCACTTTTTTATAGTTTAGGCGG
CAATCACAAATATCTTCATTTCGCGTCCTTGTTGGGTCTAAAAAGTGAGT
CTGTCGGTCGGTCGGTCGTAAAAAAATTTCAGGTTTCTATTTTTCCATCC
ATTTTTTTAGAGTGCATTCTTGGAGGAGACTGCCAGCGCCAGCCAGCAGC
CAAAACAACCGCGTGTAATGGGTGGTTTAAAATTATGACCTTTGAACACT
GTGACCTCTGACCCCAAAATAGCGCATGATAAGCAAAGTCAAAATACTGC
GAATGCGCTAGGAATCGCTCGCAAAAAATCGGCGGTAATAAAAATTTTTA
AACGAAGGAAAGTTCATTGACAGAAAAAGTTCGACAAATTTACTGACTCA
CTGACTCAATTTTCGAGAGTCGGTCGGGCGACGCGAAACAAAGATATTTG
TGATTGCCGCCTTATTTCTATTTCTATTTCTATTTTGTTGAGTTGCAGGA
GGCTTTAGAGGCCTATTCTCACAACTATAGATGCTTACTAATGAGCGTCC
CGTCAGCACCTTGTTGAACTGACTGTACCCAATTCCCCTCACATGGCATG
GGTTGACCTGGGGAAGGAACGTTCACTTGCCAAGTGAACTGCAGTGAGTG
GGAATCGAACCCTGGCCTCCTGCACAGAAGCCAAGGTTGACTACCACTAT
ACCACAGCACCTTAGTATAACCTTAGCACCTTAGCTAACTAGTATAAGCA
GAGAAAATTNGCCGAGAAAGGTCCGAACTTTTTCGTGGGTCACCCGGTAT
AAGCAGAGAAAATGCTTCACTCAGACCATAAAGTTACCAAGTGTCCTGCA
TGTTTCAGTCAATAACGTAAGTTGGTCTAATCATGACATCTTCTTTACAC
TTAAGAGATAGGAATAATATGAAAGTTGGAATCGGTGATTCAAAAAAGAA
TTATTCCTCTCTTACCACTAAGCAAAGAAAAATAGTTTTGACCTTTCTAT
TATTTTCAGCTCTAGAATTAAGGGATGTCGACATTAGACCAAGTTACGGT
ACCGTCAACTGCTCTAACTTGGGACGATTGGTCTGTAATTTTTTTGAAAT
TTCGCTCAATGATAAATCTCTTTGGCATTTCTTTGTTGGTCTTTAACAAC
GAATCCAGACCTGATCAATCGAACTTGATGAACTAATCGACCAATCGAAC
AATCAAACTCCATCGAACGATTAAAGTTCGATTAAAAAAATTAATCGAAC
CTAATCGAACACTCACAATTTTTGAAGCAATAATAGCAATAATAGTTCGC
TCAGTAAAAACTTTGGTTAGTTTGATGATATTAAATCCTCATATCTTCAT
CCTCGCTTGCTTGATGTGGGATAAAATCCTGGAAATGCAGGAATATGGGA
GAAATTATTAGAATGCGGGGTAGTTGACAGTTATGGGTAAGCTGCACATG
ATAATATATAGGTTTTTGGAAAGCTTCAAATACAAAATACAAATAATAAG
GAACAATGGCAGTTAGTCACACTAGCATCTCGCTGAAATTTGTATCAAAG
ATTAATGCTTGGAAAGCACTATATTGTTTACTTGACTCACAAGCAAATAA
AAAAATGTCACAAAACTTCTAAAGGAATTCATGAAAAAAATAAACCGGCT
CCTTTTAATGAAATCAACATTTTCAAAAACTATGAGAAAGTACCTTAATT
TTGAGCCATAGATGAAAAAATTGAACCAAGCGAACCTTAACTAATTTGAA
GGAGAACTTCCCAAGAAAAAGATCTACGGGGGAGAATGTACCTACCTAGA
TCCGCACACCGCTGGATAGGCTATATCCCAGAAATTTTGCCGGATCTCAA
ACACTGACCCATTTAAATGTGTAGAATTATTTTTACTTTATCGTGTAAAC
AAGGCCCAACAAATCGAAGCGTTGTCTCTGTAATTGAATGAGAAAATTTG
GTTGCTTGATTCTGGCTGCTGCACGTTTAGCGATCGGCCATTTTGTCTCA
TTTATTTTAAGGTTTGCAAGTTTTAACTAATTGTCTTGGGATCTTGAACT
TGATTCAGGTAACTCTCATCCTTGTTGTTGCAAATGCATCTTGTAGATGA
CTGATGATGTTTTTTGAAAGCTTGATTTCCAAGTGTGACTAACTGAATAG
GAAGCCTTGTAAATCACACAAATTTTGAAACGTTATTGTATACAAAATAA
AAGAAACACAAACTCTCACACTTTTCTTTTTTAATTAACAGCATTGCTGA
GCTATCATGTCCAAAGTGCAAAGAAAGATTTCATCCAAATCAGGTATTTT
ATTTTCCAATGCTAGAATAGCAATTTTTCGGTAGTTTCTTGTTAATGATT
ATTTTGATGAGCCAGATATCAGAAAAAACACAGTTTGATGGATAATATTT
CAGCTTTCCTTTTTCACAAATTAGGGCATTTTAGGCATCTCCCAATTTGT
TCCAATGTACACTGTGTCTCATATAAAGTGGATATGAAAAAATTGGATAT
ATCAAGGGGTCGTCCACTTTTATATATATTAGGTAGTAACTTTCATAAAG
GACCTGAAAGGACAGTTTGATTGACACTTTCAAAGTCTGTCTCATGTATA
TGGACACTTTAATTTTTTGACATTTTTTTAGATAATCTAAAAAGACTTAA
AAATTGAAATTTGAAGAAGAAAAATGAAAATGAAAAAAATGAAGAATATT
CTACAACTGCTTTAATAAAAATCATGACATGAGAAATAATTTGAGCCTTG
CTAATTTCAAATCTGTATTCCGATTTTTCGTATCTTTTTTAGATAAAAAG
TTAAAAGTTGATCATTTTCTGCGTCATTTTTAGCCGCTTTAGGCCTACTC
TAAAAAGCTGTATCTTTTTATCCAATGAATGGTTCAAATATTATGCAAAA
ATTCATGTTATCGTTTTTTGAACGGTAGAAAAAGTCTTTATTTTTTTCAT
TTTCATTTTTCTTCTTCTTTTTTCATCTTTAAAAATCGTTTGTCCTTTAG
ATTATTCCCTTTGAAAATATATTTTTCATGGTGTATAGATTTTTGATATA
GCATCAATGCTGGGAAATTGTTAAAAAAGTAAAGTGTCCACAACATTTGA
GACAGACTTTAGTTTTTATGGAAGTGACAACCCTTGTGGTAACCTTTTTT
AATAAGACTATTTATGTAATATTAAACACTCTGATGACTAAGCAGAAATT
TAATTGAAATCAAATAGCATGATTTGTACAGGACCCACTGTACACTTCAA
TCATAATAGATTAAAAAAGCATTTAAAGTCTAAATTTTCTCAAGATCAAG
GTAAGTTTGAGTAATCAAAATTTTTTTCTACTTTTTGGTCTTTTATCAGG
TCACCTCAAATGAACCATTGGATAAAATAATAAAGAATTCCTTGAGGGTG
AAATGCAAGAGTGCCGACGAATGTAGCTGGATTGGAACAATTTCAGAATA
TATAGAGGTATGATCTTAAATTGTAATATTTTTTGACTTCTCTCGTTCAT
AATGTACAAAATCAGCCCAAAATGCTTAGCTCAATAGGGAGAAGTAAGAA
ACATTCCTTGTTAAAATCTGAACAGGTTAAAATACCCAATGAAACCTCAG
ATGAGCACCAGCACTCGGCTTTGCTCAAGTCCTCGGGTCACAACTTTTAG
GGGTTACCTCAAACATTTCTCAACTAGAAGGCACCTTAGTGTTACGGGGT
CACCTAAATCCCTAGAACCTATGTATGTACCATTAAAATGTGTGTGTGTG
TGTATCCGTGTGTCTGTTCGCTCAAAATTTTGGGCCAGGCTGGAAACTTG
AAAAAATGGTTAGATTTTCCTTTTCCAAACTTGACCCTTGGGAGAATATA
TGGGAGTATTTTCTGATGTATTTTTTTCATAGATTGAAAGTTTTCATTTT
AAGGGATTTTTTTGTCTAAAGAAAGACTAACACAGAATGTCTTGAATTAC
CAGGTTCATTCCAAACGATGCCACTTCTTTGAGTTGAAATGTATTTTTGT
TGGCTGCAATAAAAAGTTAAAGAGAGTCAGCTTATCTTCTCATCAAACTG
ACTGCCAACATCGTCCAGACTGCAGCTACTGTAACCAGTTGTTATTAAAA
ACCCCTTTAAAGGTATTTTTCTGAGTTTAGTTTGCAGTCATTTCACATTT
AAAATTACTCTCACTTTAGCGAAAGGATACTCATAAAATGATATATGATA
CAATTTTGTTTTGCACAATTGTTCTATTATTTTTTGGCTGAGAAAATGGA
TCTATATTATGATGATTGTAGTTTTGTCCTATTTAAATTTATCTACGAAA
TGTTATAAATGCAGTCAGACTAAACAATCTACACTTATCGTTTTCAGGAT
CATTATGCTATATGTCCAAAATATCCAGTGGATTGTCCTAACGGATGTTG
TATTGTACTTCAACAGAGTCAGGTATAAACCCCTCCTAATTCATTTCGAT
ACTTTCCTATTGGAGAATATTATTTCAATAACTCTTATGTTAGATTTAGA
ACAAGAGAAAATTAAAAGGAATCCTTGTTAGGTGCTTGCTGATTACTTTA
TGATAAGCGTGACTATTTTTTCTTTAAGATGATTTTGGGACCAATTTCTT
TGTGTTTATGTTCTAGGTTGAATATCACACTCAACATGAGTGTAACAATA
GAGTTGTGCCATGTGGTTTTGTAAGAATCGGCTGTCGAGAAGAGGTACAT
GTTTACTCGAGGGTATTTAGAAAAGTGGAAAGTCCCTCAAAGGAACTTTT
CTCATAAACCTAGAACCCTCACTCGGGCATGTTATTGCTGCCATCATTAT
TAAGTAATGAATTCTGGGCTCAGATGGATTATTTTGACTATAAAAAGCTT
TCACTTTTTATTTTTAACTTTTTTATCTATTTCTATCCAATGCCTGCTGA
GTGAATCTTAATATCTTCAAATTTTCCACAAAAATCAGCATTTTATTTCA
TGCAATCATGTTTTTTCCCCTTTCAGATGAAACAGTCAGACCTGTTGTCA
CACTTTGATACCAATATACATTCCCACATGAAACTCATGTTCATTGAAAT
GGATCAAATGAAAAAGAAGTTTGAAAGTGATCTCAAGTCAACAACACAAA
AGGTGGAAAAACTGCAAAACAGTGAAGATCTACTGAATGCGACCATAAAA
ACTTTACAGACAGAACTAAGCACTACCAAAACAAAACTTGCTACCGCTGA
AAAGAACATTGAAGAGCTTTCTTCAAAAGGTAAGAAGTAATTCAACAAGT
AAAAAGCTTTCTCCTTCTTTTTTCTCCCACTTTATTGAGACTAAAAAATA
TTTTGGCGAGAAAAGTGGTTCTGTTAAAATTGATCTTGATTGAGGTTGAT
TTTAATTTTAGTTTTTGCCCATTATAAGCCAGTGGGGTGATCTTTTTTAA
AGCCAATTTTCTACTTAGGAATTTAGACTTTCAAAAAAGAAAAAGATTGC
AAGTTTGTGAAAAAGCCATGTGTCTGGTAGCAATGATCTAAGAGGCTACA
TAAACTACATAAATATAATATATTGCTAGCCATTATATTAACAATAAATT
GCTGAGTGCCGGCAATAATTGAATATTGGATTGCATATTATATGCATATA
ATGTTTTTAATATCCTTTTTAAAATGAAAAGAATGATCCAGAGAAGGTTT
TGCATCCAAAAGTGCAAATGATTTCTATGTAAATTAATGGCAAGATTTTT
AAAGCGAAATTTATTATTATTCTTCAAGAAGGTTGACTAACAGCCCTTTA
CCCTGGTCCATTATGATGAAGCTTAACTTCTTGCTTGCTTTCTTTTACTT
TTCTCAGTTTGCAAACCTTCTTCAGAAGGTATCAATATCTGACCAAAAAA
TTCCTCTTTAACTACGAATAGAACTATATCTTAAGCATAATTGACATGTT
ATGCTTTGATTATTTTCAGGTGCAGCCACTTATCAGCCTGTCCAACTCCA
AGCACAACCAGTGCAACAAAATGTGCAACAAAATATTCCGCAACAGCACC
AGCAGCATCAACAACAAAAGAATACTCAAGTTAAAATGTCTGCTCCTGCA
ACTCCCACACCTGCATCACAATCAATACCAGTTGATAGTGATGAAAAACT
GAAACAGAATAAGGCTAATGCAGAGTTTGCGGCAAAAGTTGCTGCCCAAG
TTGCTGCAAGACAGGTAAGAACAATTTTTTTGTTTTTAAGTACACACTAA
ATTAAATTTAGATTGAACTGATAAATCCT

Coding sequence (CDS) from alignment at sc0000226:148988..157866-

>TCONS_00016125 ID=TCONS_00016125|Name=TCONS_00016125|organism=Clytia hemisphaerica|type=CDS|length=9744bp|location=Sequence derived from alignment at sc0000226:148988..157866- (Clytia hemisphaerica)
GTGCAGCCACTTATCAGCCTGTCCAACTCCAAGCACAACCAGTGCAACAA
AATGTGCAACAAAATATTCCGCAACAGCACCAGCAGCATCAACAACAAAA
GAATACTCAAGTTAAAATGTCTGCTCCTGCAACTCCCACACCTGCATCAC
AATCAATACCAGTTGATAGTGATGAAAAACTGAAACAGAATAAGGCTAAT
GCAGAGTTTGCGGCAAAAGTTGCTGCCCAAGTTGCTGCAAGACAGGTAAG
AACAATTTTTTTGTTTTTAAGTACACACTAAATGAAACAGTCAGACCTGT
TGTCACACTTTGATACCAATATACATTCCCACATGAAACTCATGTTCATT
GAAATGGATCAAATGAAAAAGAAGTTTGAAAGTGATCTCAAGTCAACAAC
ACAAAAGGTGGAAAAACTGCAAAACAGTGAAGATCTACTGAATGCGACCA
TAAAAACTTTACAGACAGAACTAAGCACTACCAAAACAAAACTTGCTACC
GCTGAAAAGAACATTGAAGAGCTTTCTTCAAAAGGTTGAATATCACACTC
AACATGAGTGTAACAATAGAGTTGTGCCATGTGGTTTTGTAAGAATCGGC
TGTCGAGAAGAGGATCATTATGCTATATGTCCAAAATATCCAGTGGATTG
TCCTAACGGATGTTGTATTGTACTTCAACAGAGTCAGGTTCATTCCAAAC
GATGCCACTTCTTTGAGTTGAAATGTATTTTTGTTGGCTGCAATAAAAAG
TTAAAGAGAGTCAGCTTATCTTCTCATCAAACTGACTGCCAACATCGTCC
AGACTGCAGCTACTGTAACCAGTTGTTATTAAAAACCCCTTTAAAGGTCA
CCTCAAATGAACCATTGGATAAAATAATAAAGAATTCCTTGAGGGTGAAA
TGCAAGAGTGCCGACGAATGTAGCTGGATTGGAACAATTTCAGAATATAT
AGAGCATTGCTGAGCTATCATGTCCAAAGTGCAAAGAAAGATTTCATCCA
AATCAGATGGCAGTAGCTGCAAATTTCTACGATACGGGTGTTGTTTATGG
TGACCAAAAGCAGCCTGGCAATGAAGAAATTGATTATGACTTTGAACTAG
ATGGGCAAAAAGTTGATGAATATTATTGTTTAATATGTTTCCTCCTACTG
AGAGATATTGCGCAGATGCCTTGCAAACACATGCTTTGTAAGCATTGTCT
AGATGACTGGGGAAAATAGTGCAGCCACTTATCAGCCTGTCCAACTCCAA
GCACAACCAGTGCAACAAAATGTGCAACAAAATATTCCGCAACAGCACCA
GCAGCATCAACAACAAAAGAATACTCAAGTTAAAATGTCTGCTCCTGCAA
CTCCCACACCTGCATCACAATCAATACCAGTTGATAGTGATGAAAAACTG
AAACAGAATAAGGCTAATGCAGAGTTTGCGGCAAAAGTTGCTGCCCAAGT
TGCTGCAAGACAGGTAAGAACAATTTTTTTGTTTTTAAGTACACACTAAA
TGAAACAGTCAGACCTGTTGTCACACTTTGATACCAATATACATTCCCAC
ATGAAACTCATGTTCATTGAAATGGATCAAATGAAAAAGAAGTTTGAAAG
TGATCTCAAGTCAACAACACAAAAGGTGGAAAAACTGCAAAACAGTGAAG
ATCTACTGAATGCGACCATAAAAACTTTACAGACAGAACTAAGCACTACC
AAAACAAAACTTGCTACCGCTGAAAAGAACATTGAAGAGCTTTCTTCAAA
AGGTTGAATATCACACTCAACATGAGTGTAACAATAGAGTTGTGCCATGT
GGTTTTGTAAGAATCGGCTGTCGAGAAGAGGATCATTATGCTATATGTCC
AAAATATCCAGTGGATTGTCCTAACGGATGTTGTATTGTACTTCAACAGA
GTCAGGTTCATTCCAAACGATGCCACTTCTTTGAGTTGAAATGTATTTTT
GTTGGCTGCAATAAAAAGTTAAAGAGAGTCAGCTTATCTTCTCATCAAAC
TGACTGCCAACATCGTCCAGACTGCAGCTACTGTAACCAGTTGTTATTAA
AAACCCCTTTAAAGGTCACCTCAAATGAACCATTGGATAAAATAATAAAG
AATTCCTTGAGGGTGAAATGCAAGAGTGCCGACGAATGTAGCTGGATTGG
AACAATTTCAGAATATATAGAGCATTGCTGAGCTATCATGTCCAAAGTGC
AAAGAAAGATTTCATCCAAATCAGATGGCAGTAGCTGCAAATTTCTACGA
TACGGGTGTTGTTTATGGTGACCAAAAGCAGCCTGGCAATGAAGAAATTG
ATTATGACTTTGAACTAGATGGGCAAAAAGTTGATGAATATTATTGTTTA
ATATGTTTCCTCCTACTGAGAGATATTGCGCAGATGCCTTGCAAACACAT
GCTTTGTAAGCATTGTCTAGATGACTGGGGAAAATAGTGCAGCCACTTAT
CAGCCTGTCCAACTCCAAGCACAACCAGTGCAACAAAATGTGCAACAAAA
TATTCCGCAACAGCACCAGCAGCATCAACAACAAAAGAATACTCAAGTTA
AAATGTCTGCTCCTGCAACTCCCACACCTGCATCACAATCAATACCAGTT
GATAGTGATGAAAAACTGAAACAGAATAAGGCTAATGCAGAGTTTGCGGC
AAAAGTTGCTGCCCAAGTTGCTGCAAGACAGGTAAGAACAATTTTTTTGT
TTTTAAGTACACACTAAATGAAACAGTCAGACCTGTTGTCACACTTTGAT
ACCAATATACATTCCCACATGAAACTCATGTTCATTGAAATGGATCAAAT
GAAAAAGAAGTTTGAAAGTGATCTCAAGTCAACAACACAAAAGGTGGAAA
AACTGCAAAACAGTGAAGATCTACTGAATGCGACCATAAAAACTTTACAG
ACAGAACTAAGCACTACCAAAACAAAACTTGCTACCGCTGAAAAGAACAT
TGAAGAGCTTTCTTCAAAAGGTTGAATATCACACTCAACATGAGTGTAAC
AATAGAGTTGTGCCATGTGGTTTTGTAAGAATCGGCTGTCGAGAAGAGGA
TCATTATGCTATATGTCCAAAATATCCAGTGGATTGTCCTAACGGATGTT
GTATTGTACTTCAACAGAGTCAGGTTCATTCCAAACGATGCCACTTCTTT
GAGTTGAAATGTATTTTTGTTGGCTGCAATAAAAAGTTAAAGAGAGTCAG
CTTATCTTCTCATCAAACTGACTGCCAACATCGTCCAGACTGCAGCTACT
GTAACCAGTTGTTATTAAAAACCCCTTTAAAGGTCACCTCAAATGAACCA
TTGGATAAAATAATAAAGAATTCCTTGAGGGTGAAATGCAAGAGTGCCGA
CGAATGTAGCTGGATTGGAACAATTTCAGAATATATAGAGCATTGCTGAG
CTATCATGTCCAAAGTGCAAAGAAAGATTTCATCCAAATCAGATGGCAGT
AGCTGCAAATTTCTACGATACGGGTGTTGTTTATGGTGACCAAAAGCAGC
CTGGCAATGAAGAAATTGATTATGACTTTGAACTAGATGGGCAAAAAGTT
GATGAATATTATTGTTTAATATGTTTCCTCCTACTGAGAGATATTGCGCA
GATGCCTTGCAAACACATGCTTTGTAAGCATTGTCTAGATGACTGGGGAA
AATAGTGCAGCCACTTATCAGCCTGTCCAACTCCAAGCACAACCAGTGCA
ACAAAATGTGCAACAAAATATTCCGCAACAGCACCAGCAGCATCAACAAC
AAAAGAATACTCAAGTTAAAATGTCTGCTCCTGCAACTCCCACACCTGCA
TCACAATCAATACCAGTTGATAGTGATGAAAAACTGAAACAGAATAAGGC
TAATGCAGAGTTTGCGGCAAAAGTTGCTGCCCAAGTTGCTGCAAGACAGG
TAAGAACAATTTTTTTGTTTTTAAGTACACACTAAATGAAACAGTCAGAC
CTGTTGTCACACTTTGATACCAATATACATTCCCACATGAAACTCATGTT
CATTGAAATGGATCAAATGAAAAAGAAGTTTGAAAGTGATCTCAAGTCAA
CAACACAAAAGGTGGAAAAACTGCAAAACAGTGAAGATCTACTGAATGCG
ACCATAAAAACTTTACAGACAGAACTAAGCACTACCAAAACAAAACTTGC
TACCGCTGAAAAGAACATTGAAGAGCTTTCTTCAAAAGGTTGAATATCAC
ACTCAACATGAGTGTAACAATAGAGTTGTGCCATGTGGTTTTGTAAGAAT
CGGCTGTCGAGAAGAGGATCATTATGCTATATGTCCAAAATATCCAGTGG
ATTGTCCTAACGGATGTTGTATTGTACTTCAACAGAGTCAGGTTCATTCC
AAACGATGCCACTTCTTTGAGTTGAAATGTATTTTTGTTGGCTGCAATAA
AAAGTTAAAGAGAGTCAGCTTATCTTCTCATCAAACTGACTGCCAACATC
GTCCAGACTGCAGCTACTGTAACCAGTTGTTATTAAAAACCCCTTTAAAG
GTCACCTCAAATGAACCATTGGATAAAATAATAAAGAATTCCTTGAGGGT
GAAATGCAAGAGTGCCGACGAATGTAGCTGGATTGGAACAATTTCAGAAT
ATATAGAGCATTGCTGAGCTATCATGTCCAAAGTGCAAAGAAAGATTTCA
TCCAAATCAGATGGCAGTAGCTGCAAATTTCTACGATACGGGTGTTGTTT
ATGGTGACCAAAAGCAGCCTGGCAATGAAGAAATTGATTATGACTTTGAA
CTAGATGGGCAAAAAGTTGATGAATATTATTGTTTAATATGTTTCCTCCT
ACTGAGAGATATTGCGCAGATGCCTTGCAAACACATGCTTTGTAAGCATT
GTCTAGATGACTGGGGAAAATAGTGCAGCCACTTATCAGCCTGTCCAACT
CCAAGCACAACCAGTGCAACAAAATGTGCAACAAAATATTCCGCAACAGC
ACCAGCAGCATCAACAACAAAAGAATACTCAAGTTAAAATGTCTGCTCCT
GCAACTCCCACACCTGCATCACAATCAATACCAGTTGATAGTGATGAAAA
ACTGAAACAGAATAAGGCTAATGCAGAGTTTGCGGCAAAAGTTGCTGCCC
AAGTTGCTGCAAGACAGGTAAGAACAATTTTTTTGTTTTTAAGTACACAC
TAAATGAAACAGTCAGACCTGTTGTCACACTTTGATACCAATATACATTC
CCACATGAAACTCATGTTCATTGAAATGGATCAAATGAAAAAGAAGTTTG
AAAGTGATCTCAAGTCAACAACACAAAAGGTGGAAAAACTGCAAAACAGT
GAAGATCTACTGAATGCGACCATAAAAACTTTACAGACAGAACTAAGCAC
TACCAAAACAAAACTTGCTACCGCTGAAAAGAACATTGAAGAGCTTTCTT
CAAAAGGTTGAATATCACACTCAACATGAGTGTAACAATAGAGTTGTGCC
ATGTGGTTTTGTAAGAATCGGCTGTCGAGAAGAGGATCATTATGCTATAT
GTCCAAAATATCCAGTGGATTGTCCTAACGGATGTTGTATTGTACTTCAA
CAGAGTCAGGTTCATTCCAAACGATGCCACTTCTTTGAGTTGAAATGTAT
TTTTGTTGGCTGCAATAAAAAGTTAAAGAGAGTCAGCTTATCTTCTCATC
AAACTGACTGCCAACATCGTCCAGACTGCAGCTACTGTAACCAGTTGTTA
TTAAAAACCCCTTTAAAGGTCACCTCAAATGAACCATTGGATAAAATAAT
AAAGAATTCCTTGAGGGTGAAATGCAAGAGTGCCGACGAATGTAGCTGGA
TTGGAACAATTTCAGAATATATAGAGCATTGCTGAGCTATCATGTCCAAA
GTGCAAAGAAAGATTTCATCCAAATCAGATGGCAGTAGCTGCAAATTTCT
ACGATACGGGTGTTGTTTATGGTGACCAAAAGCAGCCTGGCAATGAAGAA
ATTGATTATGACTTTGAACTAGATGGGCAAAAAGTTGATGAATATTATTG
TTTAATATGTTTCCTCCTACTGAGAGATATTGCGCAGATGCCTTGCAAAC
ACATGCTTTGTAAGCATTGTCTAGATGACTGGGGAAAATAGTGCAGCCAC
TTATCAGCCTGTCCAACTCCAAGCACAACCAGTGCAACAAAATGTGCAAC
AAAATATTCCGCAACAGCACCAGCAGCATCAACAACAAAAGAATACTCAA
GTTAAAATGTCTGCTCCTGCAACTCCCACACCTGCATCACAATCAATACC
AGTTGATAGTGATGAAAAACTGAAACAGAATAAGGCTAATGCAGAGTTTG
CGGCAAAAGTTGCTGCCCAAGTTGCTGCAAGACAGGTAAGAACAATTTTT
TTGTTTTTAAGTACACACTAAATGAAACAGTCAGACCTGTTGTCACACTT
TGATACCAATATACATTCCCACATGAAACTCATGTTCATTGAAATGGATC
AAATGAAAAAGAAGTTTGAAAGTGATCTCAAGTCAACAACACAAAAGGTG
GAAAAACTGCAAAACAGTGAAGATCTACTGAATGCGACCATAAAAACTTT
ACAGACAGAACTAAGCACTACCAAAACAAAACTTGCTACCGCTGAAAAGA
ACATTGAAGAGCTTTCTTCAAAAGGTTGAATATCACACTCAACATGAGTG
TAACAATAGAGTTGTGCCATGTGGTTTTGTAAGAATCGGCTGTCGAGAAG
AGGATCATTATGCTATATGTCCAAAATATCCAGTGGATTGTCCTAACGGA
TGTTGTATTGTACTTCAACAGAGTCAGGTTCATTCCAAACGATGCCACTT
CTTTGAGTTGAAATGTATTTTTGTTGGCTGCAATAAAAAGTTAAAGAGAG
TCAGCTTATCTTCTCATCAAACTGACTGCCAACATCGTCCAGACTGCAGC
TACTGTAACCAGTTGTTATTAAAAACCCCTTTAAAGGTCACCTCAAATGA
ACCATTGGATAAAATAATAAAGAATTCCTTGAGGGTGAAATGCAAGAGTG
CCGACGAATGTAGCTGGATTGGAACAATTTCAGAATATATAGAGCATTGC
TGAGCTATCATGTCCAAAGTGCAAAGAAAGATTTCATCCAAATCAGATGG
CAGTAGCTGCAAATTTCTACGATACGGGTGTTGTTTATGGTGACCAAAAG
CAGCCTGGCAATGAAGAAATTGATTATGACTTTGAACTAGATGGGCAAAA
AGTTGATGAATATTATTGTTTAATATGTTTCCTCCTACTGAGAGATATTG
CGCAGATGCCTTGCAAACACATGCTTTGTAAGCATTGTCTAGATGACTGG
GGAAAATAGTGCAGCCACTTATCAGCCTGTCCAACTCCAAGCACAACCAG
TGCAACAAAATGTGCAACAAAATATTCCGCAACAGCACCAGCAGCATCAA
CAACAAAAGAATACTCAAGTTAAAATGTCTGCTCCTGCAACTCCCACACC
TGCATCACAATCAATACCAGTTGATAGTGATGAAAAACTGAAACAGAATA
AGGCTAATGCAGAGTTTGCGGCAAAAGTTGCTGCCCAAGTTGCTGCAAGA
CAGGTAAGAACAATTTTTTTGTTTTTAAGTACACACTAAATGAAACAGTC
AGACCTGTTGTCACACTTTGATACCAATATACATTCCCACATGAAACTCA
TGTTCATTGAAATGGATCAAATGAAAAAGAAGTTTGAAAGTGATCTCAAG
TCAACAACACAAAAGGTGGAAAAACTGCAAAACAGTGAAGATCTACTGAA
TGCGACCATAAAAACTTTACAGACAGAACTAAGCACTACCAAAACAAAAC
TTGCTACCGCTGAAAAGAACATTGAAGAGCTTTCTTCAAAAGGTTGAATA
TCACACTCAACATGAGTGTAACAATAGAGTTGTGCCATGTGGTTTTGTAA
GAATCGGCTGTCGAGAAGAGGATCATTATGCTATATGTCCAAAATATCCA
GTGGATTGTCCTAACGGATGTTGTATTGTACTTCAACAGAGTCAGGTTCA
TTCCAAACGATGCCACTTCTTTGAGTTGAAATGTATTTTTGTTGGCTGCA
ATAAAAAGTTAAAGAGAGTCAGCTTATCTTCTCATCAAACTGACTGCCAA
CATCGTCCAGACTGCAGCTACTGTAACCAGTTGTTATTAAAAACCCCTTT
AAAGGTCACCTCAAATGAACCATTGGATAAAATAATAAAGAATTCCTTGA
GGGTGAAATGCAAGAGTGCCGACGAATGTAGCTGGATTGGAACAATTTCA
GAATATATAGAGCATTGCTGAGCTATCATGTCCAAAGTGCAAAGAAAGAT
TTCATCCAAATCAGATGGCAGTAGCTGCAAATTTCTACGATACGGGTGTT
GTTTATGGTGACCAAAAGCAGCCTGGCAATGAAGAAATTGATTATGACTT
TGAACTAGATGGGCAAAAAGTTGATGAATATTATTGTTTAATATGTTTCC
TCCTACTGAGAGATATTGCGCAGATGCCTTGCAAACACATGCTTTGTAAG
CATTGTCTAGATGACTGGGGAAAATAGTGCAGCCACTTATCAGCCTGTCC
AACTCCAAGCACAACCAGTGCAACAAAATGTGCAACAAAATATTCCGCAA
CAGCACCAGCAGCATCAACAACAAAAGAATACTCAAGTTAAAATGTCTGC
TCCTGCAACTCCCACACCTGCATCACAATCAATACCAGTTGATAGTGATG
AAAAACTGAAACAGAATAAGGCTAATGCAGAGTTTGCGGCAAAAGTTGCT
GCCCAAGTTGCTGCAAGACAGGTAAGAACAATTTTTTTGTTTTTAAGTAC
ACACTAAATGAAACAGTCAGACCTGTTGTCACACTTTGATACCAATATAC
ATTCCCACATGAAACTCATGTTCATTGAAATGGATCAAATGAAAAAGAAG
TTTGAAAGTGATCTCAAGTCAACAACACAAAAGGTGGAAAAACTGCAAAA
CAGTGAAGATCTACTGAATGCGACCATAAAAACTTTACAGACAGAACTAA
GCACTACCAAAACAAAACTTGCTACCGCTGAAAAGAACATTGAAGAGCTT
TCTTCAAAAGGTTGAATATCACACTCAACATGAGTGTAACAATAGAGTTG
TGCCATGTGGTTTTGTAAGAATCGGCTGTCGAGAAGAGGATCATTATGCT
ATATGTCCAAAATATCCAGTGGATTGTCCTAACGGATGTTGTATTGTACT
TCAACAGAGTCAGGTTCATTCCAAACGATGCCACTTCTTTGAGTTGAAAT
GTATTTTTGTTGGCTGCAATAAAAAGTTAAAGAGAGTCAGCTTATCTTCT
CATCAAACTGACTGCCAACATCGTCCAGACTGCAGCTACTGTAACCAGTT
GTTATTAAAAACCCCTTTAAAGGTCACCTCAAATGAACCATTGGATAAAA
TAATAAAGAATTCCTTGAGGGTGAAATGCAAGAGTGCCGACGAATGTAGC
TGGATTGGAACAATTTCAGAATATATAGAGCATTGCTGAGCTATCATGTC
CAAAGTGCAAAGAAAGATTTCATCCAAATCAGATGGCAGTAGCTGCAAAT
TTCTACGATACGGGTGTTGTTTATGGTGACCAAAAGCAGCCTGGCAATGA
AGAAATTGATTATGACTTTGAACTAGATGGGCAAAAAGTTGATGAATATT
ATTGTTTAATATGTTTCCTCCTACTGAGAGATATTGCGCAGATGCCTTGC
AAACACATGCTTTGTAAGCATTGTCTAGATGACTGGGGAAAATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009013XLOC_009013Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016125-exon-sc0000226-1575043694:157395..157866TCONS_00016125-exon-sc0000226-1575043694:157395..157866Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1575043694:152924..152975TCONS_00016125-exon-sc0000226-1575043694:152924..152975Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1575043694:151760..151867TCONS_00016125-exon-sc0000226-1575043694:151760..151867Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1575043694:151105..151263TCONS_00016125-exon-sc0000226-1575043694:151105..151263Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1575043694:150795..150869TCONS_00016125-exon-sc0000226-1575043694:150795..150869Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1575043694:150523..150600TCONS_00016125-exon-sc0000226-1575043694:150523..150600Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1575043694:149988..150240TCONS_00016125-exon-sc0000226-1575043694:149988..150240Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1575043694:148988..149297TCONS_00016125-exon-sc0000226-1575043694:148988..149297Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1510915933:157395..157866TCONS_00016125-exon-sc0000226-1510915933:157395..157866Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1510915933:152924..152975TCONS_00016125-exon-sc0000226-1510915933:152924..152975Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1510915933:151760..151867TCONS_00016125-exon-sc0000226-1510915933:151760..151867Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1510915933:151105..151263TCONS_00016125-exon-sc0000226-1510915933:151105..151263Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1510915933:150795..150869TCONS_00016125-exon-sc0000226-1510915933:150795..150869Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1510915933:150523..150600TCONS_00016125-exon-sc0000226-1510915933:150523..150600Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1510915933:149988..150240TCONS_00016125-exon-sc0000226-1510915933:149988..150240Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1510915933:148988..149297TCONS_00016125-exon-sc0000226-1510915933:148988..149297Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1491911889:157395..157866TCONS_00016125-exon-sc0000226-1491911889:157395..157866Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1491911889:152924..152975TCONS_00016125-exon-sc0000226-1491911889:152924..152975Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1491911889:151760..151867TCONS_00016125-exon-sc0000226-1491911889:151760..151867Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1491911889:151105..151263TCONS_00016125-exon-sc0000226-1491911889:151105..151263Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1491911889:150795..150869TCONS_00016125-exon-sc0000226-1491911889:150795..150869Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1491911889:150523..150600TCONS_00016125-exon-sc0000226-1491911889:150523..150600Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1491911889:149988..150240TCONS_00016125-exon-sc0000226-1491911889:149988..150240Clytia hemisphaericaexon
TCONS_00016125-exon-sc0000226-1491911889:148988..149297TCONS_00016125-exon-sc0000226-1491911889:148988..149297Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016125-proteinTCONS_00016125-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000226supercontigsc0000226:148988..157866 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.43196	8.82005	5.47434	4.91671	16.5181	11.5764	7.84847	8.23903	6.44543	9.96214	6.8488	6.57254	13.3994	13.7674	12.4229	13.7018	9.99597	8.80036	10.8095	16.6816	10.1496	9.30615	8.44931	10.6778	15.1902	15.0966	12.0386	10.0928	8.50761	8.13132
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR001293Znf_TRAF
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Blast
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BLAST of TCONS_00016125 vs. Swiss-Prot (Human)
Match: TRAF5 (TNF receptor-associated factor 5 OS=Homo sapiens GN=TRAF5 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 2.108e-19
Identity = 82/291 (28.18%), Postives = 133/291 (45.70%), Query Frame = 3 
Query:  291 GVVYGDQKQPGNEEIDYDFE--LDGQKVDE----YYCLICFLLLRDIAQMPCKHMLCKHCLDDWGKYIAELSCPKCKERFHPNQVTSNEPLDKIIKNSLRVKCKSADECSWIGTISEYIEVHSKRCHFFELKCIFVGCNKKLKRVSLSSH-QTDCQHRPD-CSYCNQLLLKTPLKDHYA-ICPKYPVDCPNGCCIVLQQSQVEYHTQHECNNRVVPCGFVRIGCREEMKQSDLLSHFDTNIHSHMKLMFIEMDQMKKKFESDLKSTTQKVEKLQNSEDLLNATIKTLQTEL 1136
            G+  G  +Q     I  DFE  ++ Q V+     Y C  C  +L +  Q  C H  C+HC+    +      CP  KE     +V  +    + + N L V C +A  C+    +  Y + H ++C F  ++C    C + + R  L  H    CQ R + C YC + ++   L++H   +CP+YPV CPN C  ++ +++V+ H    C      C F   GC    K+ +L  H  + +  HM+L+  +  Q++++     KS  QK  K+Q     L  TIK L+ E 
Sbjct:    9 GMPCGFIRQNSGNSISLDFEPSIEYQFVERLEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNCCKREVLN-LYVYCSNAPGCNAKVILGRYQD-HLQQCLFQPVQCSNEKCREPVLRKDLKEHLSASCQFRKEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLA-VCPEAEQDCPFKHYGCAVTDKRRNLQQHEHSALREHMRLVLEKNVQLEEQISDLHKSLEQKESKIQQ----LAETIKKLEKEF 292
The following BLAST results are available for this feature:
BLAST of TCONS_00016125 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRAF52.108e-1928.18TNF receptor-associated factor 5 OS=Homo sapiens G... [more]
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