TCONS_00016124 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016124
Unique NameTCONS_00016124
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1188

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016124 ID=TCONS_00016124|Name=TCONS_00016124|organism=Clytia hemisphaerica|type=transcript|length=1188bp
TAAAGCGATCAGAAAATGCTTGGGTCCTACCTAGTGACCAAGACAAAGAC
TTACCTGGTCAAAGGTCAAAGCTGAACTCCGGAATAGGTCAAACTAATCA
AGCAGTCGACAGACGAGATGACAAAAGAAACACAGACCTGTCGCCACCTG
CCAATGATAAAGATAAGACGAGGGCGAAAACCAAGTCGATTTTTTTCGAT
GAAGTTGACGAATTCGCGGGTGTTCTTTTCGTTCGACAGgttGGTAAGAA
GAATAAGAAGAGTGTACATTGGTTAGAATTGGTTAATGAAGAGGCTACTG
CAAAGCGAATACAATACGATCGAGATTTCTTACTGAAATTCCGTTACATC
CCGTTTTGCATCTCAAAACCAGCCAACTTACCAAATATTGATGTCGTTCT
TGATACTGCtcatcaaccaactaaacccttAGCTCCTTGTCAAAGTGAAG
ATCATGCTTCTATCAAGATGAAGGGGAAAAAGGAAAGAGGCTTGGAAATC
GAAAACAAAGCAGACGCTCCTATTCAAGGAGCTTTTCAACCAAGACCTCa
ggtatatattattttttagatAACCTTGATTAAAAGCCAGTCGGTCTTAT
GAATGAGTACTTGAAATAATGTCTCTTGCTATAGTACATCATCACATCGC
ATCAATGCATCTCTTACCTTTtacttacacagcattttttaaCAACTTTC
TCCCTTTCTAGCGCCGAGCaagcacaaattttgagaaaattttgcttTGC
AGCTTAatcctattcatactaggctttttaggggcggttcaaaacccttt
tcctgtaccaccccttaacttttgggGTGGTAAAGTCATTTTGGATTAAA
TTTGGTTCACAAGGTCTTTGTCTGacaaaataatcttttttggTGACGTC
ACTCAACAATGCCGCCGAAAGtaagcaaaaaccgaaaattttcttAGTTC
TTTTAAATTGGCATGATGCTCAAGTTGTGAAAATTTTCAGgtgtcaaaaa
ttattttattttgaagctaaataaaagttaggaaattacaaaaaaattca
cgtcaaaagctctattatttcaggagttATTAACATTCGTTTCACCACCG
AACAGAAAAAGCTCCCTCCCCTAGCACGAATAGAGTTAAGAGGCGTGCCT
TCTTCctatatcataaaaaagaaagtgttAAATTATTG
Run BLAST on NCBI

protein sequence of TCONS_00016124-protein

>TCONS_00016124-protein ID=TCONS_00016124-protein|Name=TCONS_00016124-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
KRSENAWVLPSDQDKDLPGQRSKLNSGIGQTNQAVDRRDDKRNTDLSPPA
NDKDKTRAKTKSIFFDEVDEFAGVLFVRQVGKKNKKSVHWLELVNEEATA
KRIQYDRDFLLKFRYIPFCISKPANLPNIDVVLDTAHQPTKPLAPCQSED
HASIKMKGKKERGLEIENKADAPIQGAFQPRPQVYIIF
Run BLAST on NCBI

transcript from alignment at sc0000226:133127..143181-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016124 ID=TCONS_00016124|Name=TCONS_00016124|organism=Clytia hemisphaerica|type=transcript|length=10055bp|location=Sequence derived from alignment at sc0000226:133127..143181- (Clytia hemisphaerica)
TAAAGCGATCAGAAAATGCTTGGGTCCTACCTAGTGACCAAGACAAAGAC
TTACCTGGTCAAAGGTACTTTTATCATGTTTAGAATGATTACTATAGTCT
AATCTTTTTAACAATTTCCATTTCTTAATTAACTGAGAGATTACTATGAT
TTGAAATGAATTTTCTTTAAATACAAACCTGCTAAATTTCATTAAAAATG
CTTAACAATACAAAACTGAAACAAATCAAAGTTTAGTTTCAGTTGGTATC
AACATAAGTTTAGAGAAGGAAGTTTGCATGATTTTCAAAATTCTTGTCAA
CTGATACCTCAGCAATCTGATAATGTAGAAATCAATATTTCCCCATTAAA
GAAAGAAGAGATAATAGATATGATTTTAAGATGATTTAAAACAACTCATT
AACTGAACAACAATAAATCATTAACTTTATGTCCTCAACTTCAAGAGATA
ACGTTAACTTCTCAACAACAAAGAGAAAGGACATCAAGATGCTCGCTCCT
CTGTCTCACAGCCAGAATGGAACTTTTATAGTACTAATTCTATTAGAATT
TGCAGTCGCTTTTCTCCGCTGAAGATTATAATCGAGAATTCTTAAATGAT
ATAAAATATTGGAAAGATTAAGAACTGATACACTTTGTATCATACTCATA
TGACTGCGTATGAAGGGAATTATTAAGTAACACTAAAACCTTTTAGAATG
TCCTTCATAAAGACCATCATTTTTCAGGTCAAAGCTGAACTCCGGAATAG
GTCAAACTAATCAAGCAGTCGACAGACGAGATGACAAAAGAAACACAGAC
CTGTCGCCACCTGCCAATGATAAAGATAAGACGAGGGCGAAAACCAAGTC
GATTTTTTTCGATGAAGTTGACGAATTCGCGGGTGTTCTTTTCGTTCGAC
AGGTATACCTTTCCGATTTGCAACATCATTGTAGTTAAGTTCAATGTTCT
TTTAGGGTTCAGGTTAAATTTTTGATAGTCTAGCATGCTTTTAGACGTAT
AGTAAGGACAACTGAAGAATATTAGAAAAGTCGCCTGGTGACTTCTGTTC
AAGGGTAGATTTTTTTAGAATTTTGCTTTTTTGTGGTTGGTTCGTCCCTT
CTTTATTCTCAACTTCAGTTGAGCTAGAATGTCTGTCTGTCTGTCTGTCT
GTCAAATAGCTACAAGTGATTTGCACTTCTTTGGATCAGAGGAATGTAAA
GAGATGGAAAAACAGCTTTTTTGATTACACAAAGTTCAACGATCACTTCT
ATTGAAAATTCTATTGTAAAAACGTTGATTAGGTCATTAAATGAAAGTCC
AGAAAAGACGGCTCGCCATACAAATCGGACNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAATATTTTTACTAATG
TATAGCAAAAGAAATTCTTAACGCAATGATATTAAATTGGTTCTTGTAAA
ACTGTCAGAAGTCGAGTAAAGTCAAGATGAAGTTATAATTTTCTCGCGCT
CTAGCTTTCCATATAATGATGCGCTCATAATGCGGTTATATCAATAGAAT
CGCTAGGAAATTCTGAGCAAGAAGATGTAGGTACCTTTTCGTATAGGAGA
GGTGTACCCAAAATATAAGCCCTAAAAGTTTGCGCATAATCAGGCTTGAA
ACAAAAGAATTTTGTCACAACACGCTAATTATGCAGATTTTTTATAGCGA
CAACAAAAGAAACCTATTTACTCGACATAAACTCCCTTAAGGTGGGAGTC
ACATGAAGTTTTGAGATTTGGTGAAAAAATTATCGATTTCGGGATTTTGC
GCGTTTTATGACCCTATACCCTTTCTGAACACACTCTGTTCTGAAAATTT
TAAGGCCGTAGCATTTATATTTCCTGAGATATAAGCTTTTTTCTAGACCC
TGATCTAAAGTATTCTCCTTAGCAACGAAAAATCATACCCGTTGCTAGGG
CCCGATTTCTTTATGGCTGATCTAAACAAAGGATCATGACATACCAAACG
AAAGATCTTTTTACGCCCTTTTCGGGCGTCTAAATCAATACCGCCTTTTT
TTCGCGGGATTTCCTAATATGACGTAATCAAAGATGGTAACCAAAGAAGT
GAAATTTTTAAAAACATACAAATTTTGGAGGCTGTCAGCCAGTCAGCAGT
GTTTTTGACTATGAAAACTGCTTTAATTTGGAAATGTTGGATTGACTAAT
GACATTTTAGCTCTTTAATGTCATTCTTCTCAACTAAGAAAGCTTGAGCT
AGGTGAAACCAAAGACTTGATTCTGAAACTCAACGTTTTCGATATGAACT
TTGTTTGACGACACCGTAAAACTTACTGAAGGACGAAGACCAAAGGCATA
TTCAATGATGTATCTATTTAAAGATCCAAGTTTTAAAGGAATTGAAAGCC
TGGAGGCTGGTTTAACAATTGTGTGTGATGAATTATTGAAGGTCTGGGGC
GCTCCCTCCGCCCTCTGGCTGGATTATTTATACATTCACGAAGAAATCGT
GCACGGCTAGCTAGATGTCCAAGTGGATTCTTGTATCACAACAGATCAAC
TTTAGATTAACTTATAACTGACAGAATCAGTGAGGAAAATATACTAGGAT
GATCTATTACATTGAAAATATAGTTTTTGTTGTGAAAACACATTTAAATT
GACTTACATCAATGTTGACGTGGAGTTTGGCGCAAAATTTTAAGGATTGG
CGCACATCACGTGAAAGTGATAATTTGGAATTTCTGGACTATTTTGATAT
TTCAAAGCCTTTTCCAAAGTATATAAAGTAGAACTATAGTCCATTTTAGT
CAAACAGAGAAAGAATTTTGTAAAACGGTTGATTTATTACAGAGAAATAG
AGATATAATATCTACTTCTGACTTTACGGACCGTTTTCTCAAAATAGGTT
TCAGGGGTTTTTCGCACACCTTGGCAACGTTTTCTCAGGATTGACAAGTG
CTATGAACTTGAAATTTTCATGAGAAATTCAATTTATGGTCTAGAGTGTT
ATGAATGGATTACATTTTTGAAAAAAATACTTTTTTGATTCCTAAATTCA
AAAAATGCATTTTTTAGTTTCCAGACCCCCTGGAATGAAATTTCAAAAAA
AAATTCCATTCATAACACTCCTTATCCAAATATTAACAAGCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTGCAAAAAAAATTTTTGTGATAGGTTTT
GTAGATTTTTCTAAAACGTTGACACAATATTTTCACAGTACATTACCCCC
TGGCTGATTTTACCCCCGTCTTGATTATTTTTAGATTTTTTTTTACATTT
TACAAATCATCTATTGTTAAGTTACCTCTGTAGAAAATTTCATTTAAAAA
TCTCTTCAAGTTCAAAAGTTATATAGGAAAATGTAAAAAATCAACTTTCT
CAATTTTTCATGTGACTCCCACCTGGTATATGACGAGCCGTTTTTCCATT
GTTTTCAAGAAGCTGTTTTTCCATCTCTTTACATTCCTCTGTTTGGATAC
TATCGAACACATTTTGGGCATTTATGCTAAAGAAAATACCCCCTTCGAAT
ATGTGACTCCCCAAGCGGGAAAAACCGATCAAAACAAAAATTTTACCTCT
TCTAGACCGCTCTTAATAGAGAATTTCTTAGTCTACATAATAGACAGCTC
CAGGCTTTTAGGCCTTACTCTTGCTCGGGTAAGTTATGGCATGTCTCAAA
AACTGAAAATTACCATAATTTTTAGATCGCATTAGTCGACAGAAAATGAC
TGAACATGAAGGGCACTATGATTTAGTTTCTAACCTGATGTGTAACCTAA
TTGTTGAAGATGAAAAATGGGACATTTCGGGTATAACTAACCATGCTAAA
GACTGTACCCAAGGACTTAATTGGAACGAAGCTAGGCTTTTAAAGACTGA
AGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTTCAACCGTTTGTATTGTTTAGACCTGACGAAGACCTGCAC
CAAGCAGGTCGAAATATTGTTTACACGAAAAATATATACAGAATGACCAT
TAAAATGTTATTTAAAGTGTAACCTAATTGTTTTTTCACTGATTTTTGCG
AAAAACCGCAAAACCGTCATCAAAACTAAAAATTGAATTTCTCAAGAATG
GTTTACCCAGTTGTCTTCAAACTTTCACCAAAGATGTATCTTACTGAAAT
TGATCATTTGAAAGAAATATTTTTTCGAAATTTTGATGACGTCAGCATAA
ATTAGTAAAAAACGAAAAATCCTATTTTTTGCTGACGTAATCAGAATTTC
GAAAATAAATTTCTTTCAAATTATCGACTTTAAAACAAAATTAGTTTAAG
TTAGTTAGTTAAAAAAACAATTAGTTTTCACATCAGGTTAGAAACTACAT
CATAGTACCCTCCATGTTCAGTCATTTGTTTGGTTGTTTTCTGGCGACTA
TTATGGTAATTTTAAGACATGCCATAACTTACCCGAGTGGTCTATAGGCA
CTGCTATATACGGCCACTAGTAACCCCCACCAGGAATTGCTTATCAATAG
GTTTAAACATAATAAATAACTTTCACAAAAAATGTTTATCAATAAACATT
TCAAGCTATTCTACTTTAAATTTGAAAAAGTAGTTCGAAACTTATTTTTA
ACAAACTGACTTTTTTTTAATGTCGAAATTTCACAAAATCATGAAAAACA
GTGAGCAAACTTTTCTTTTGACAATTACCTTCTTTACACATGAAAATAGC
AAAAAATGCAACTGTATTCATCAAAACTTGTTAAGGAATTTGAAAATATG
GTAAAACAAGCTATTCCCATGTGGGANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTGAAAAAATGGATC
ACCATTCAGCTCGACTAGTTGCTCAAAGAACTTGGGTCTGCATTGAGTTT
GCTCGTCTTAGAAATGTTCATGACTTGCAAATAAGATGGAAAAACTGTTG
GCAAAATATAAATAAGAAAAAAAAAAATAAAAAAAACAATAAGATTGTGT
TTTTGTCATTTTGTCTTATTTATAGCGTGGTTGCTGTTTTTAATGATTTT
TTGAAATTTCGACATGGAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTTTAAATAACTTTCGAACTACTTTTTCAAATTTAATGTATGA
TAGCTCAAAATTTAAGTTAAAGCATCCTCTATACGATAAAAAAAGAATGA
GCAAAAAATTAAAATCCTGAAGCTCACAATAACTCGACAAACCTGTATAC
TTTTTTTTGGTGCACCCGGTAGATATTTTGTTATTATGAGAAAGGAATTA
TACTTTACATATGGTGTGTGAGAAAAGAAAGCGAAATCGGAATGTAAAAG
ACTGCTGACGGCAACGCCGACGGGAAAGACCATTCTCACGTCGCCGTCGC
TGTTCTCGATGTGATTTCGGAAATTCTCTAATACCGTATCAAGACATGTC
CGATTTTCAGGTACTTTAGATCGCTTGGGAAGTCACATATAACGATGTAA
GGACGAAGGGAAATTAATGGAAATGTTCATATTATTTTTTAAGGTTGGTA
AGAAGAATAAGAAGAGTGTACATTGGTTAGAATTGGTTAATGAAGGTATC
AATTGTTTCTTTTTTGATCTGTCATCTAACTTTCTTGTTTCCTCTTGCAC
GCCCCCACCATAGGGTGAGCAGACCCCTTCTCCCAATTCAAAAAGGAAGA
TTTTTTATGTCAATCTCAATCCCTTCTGAAGGTGCTCCCTGCCTGAGGAT
ACACCCTACCCCCTAATCAGTGATGACAACCAATTTAGGACATTCGTAGT
GACATAAAAACAACTGCGTATAATAGTTTTTTTTAATGTGATGTTGTTTT
GTTCTACTTGATAACAATTGTGACCTTTGTGTGCGCAAGACTTGAACTTT
GAAGGCTTCAAATGTTTTTAGCCTAAAAATTATTTTCAAAGAAATTGCTG
TGTGTTTTAGGGTTTCGAAAGCCTTAAAGCCTGTAAAATGTTCTTAACTT
ATTCTTGATATTTTTTGGCCACCGAAGCATTGTGTTTATAGTTTGTTCTT
GTGAGAAAACGTGTAAGAACTCACCAGAAAGAGTAAATATTCTGTTCAAT
ATTAATAGATTTTCTTCTTTCTCCCAAAATTCTTAACTTATTGGGTTCTA
GAATACCTTAGATATATGTATTTTCACAGTTACTAAATTTCCCCTTGTAT
TCCATGGCAGCAAGTTTTTAGACTTCTTGTAATCAAATACAAAATACACC
CAGGCAATGAATAGGCCGAGATTGCTGGATTTTTAAAAGTAAACTTAAAT
TATTATTATTTAGTGAATCATTTGAATCGTGAATTCTAATAGCCGCGAAA
AATTCAAGAAATTCGGAATTAATCCACTCACTATAAAAAAGACTCTGGTC
ACTTCGCTTGCATAAAAAAATCTGCCCATCGCTTTGAAGTTTCTCATCTG
GATTTTGCGATAGTGCTGTTAGAAAGGATGAACTGTTAAGGAATTTTTCA
TTCTTATATCCTTGTCCCCGTGAAATGATACCGACCAAATTAGTTGAAAT
GAAAGAATTATCAATCTTTTGATATAATAGATTTTTCACTTATTAATTTT
GTAGAGGCTACTGCAAAGCGAATACAATACGATCGAGATTTCTTACTGAA
ATTCCGTTACATCCCGTTTTGCATCTCAAAACCAGCCAACTTACCAAATA
TTGATGTCGTTCTTGATACTGCTCATCAACCAACTAAACCCTTAGCTCCT
TGTCAAAGGTATATTATAGTCCTTCAAGTTTTATCAAGATAATATCTTTT
TACGAGCCTTTCATTGTTTTAATAATGAAAAGGAGTCTTGTCCTTACAAT
AAACATCGTTAACGATAATCTAGGTGAAACTGGACTTTAGAGCATAAACC
CTTTGAGCATCTTAGAGGGGGGTTTGGGCAAAGAGGCCCACCTCTAAAAT
GAATTTTTTCGGTAGTTTTTGAAATATCTATCCTATTGAGTTGAAATTTT
GTAAGTGTGCACCAAATTTAATGAATTGGCATCTTTCTCAAAATTTCGGC
ATTGTTAAAGACGTCATCGCCCCCTCATCTTCAATTATCCATGATCTTGA
AATTTCGACCAGTGGTAGATCCACTGGTCAAAGTTTCAAGATCATAGCAC
TTGTCAATCTTGAGATTTAAAGGGGGGCCTGGAGCCCCCCCCCTCCAAGT
GCTTCCCTTAGTAAAAAAAATTAGGAAGATACTCGATGGNTTAAAGGGGG
CCTGGAGCCCCCCCCCCAAGTGCTTCCCCTAGTAAAAAAATTAGGAAGAT
GCTCGAAGAGTTACTCTCGGGTACCTAATATCCTGGGGTTAGAATAGGCG
GAAGGGGGTTGGAATAATGTCCTCGATGGAAAATCTTTAAAAACGAGGGT
AATACAGAAGAATTAGGGCAAATTTATTTTCTTTGTACAATTTTAAGTCT
AAGGGTAACAAGAAGATCTCCAGGGCATTAAATATTTCTATTTGATAAGA
GTTTTTGATGTTAAAGAAACGTTAGTCAATGTTAACGTTTCCAAAATGTA
TTTGTTTTACAGTGAAGATCATGCTTCTATCAAGATGAAGGGGAAAAAGG
AAAGAGGCTTGGAAATCGAAAACAAAGCAGACGCTCCTATTCAAGGAGCT
TTTCAACCAAGACCTCAGGTATATATTATTTTTTAGATAACCTTGATTAA
AAGCCAGTCGGTCTTATGAATGAGTACTTGAAATAATGTCTCTTGCTATA
GTACATCATCACATCGCATCAATGCATCTCTTACCTTTTACTTACACAGC
ATTTTTTAACAACTTTCTCCCTTTCTAGCGCCGAGCAAGCACAAATTTTG
AGAAAATTTTGCTTTGCAGCTTAATCCTATTCATACTAGGCTTTTTAGGG
GCGGTTCAAAACCCTTTTCCTGTACCACCCCTTAACTTTTGGGGTGGTAA
AGTCATTTTGGATTAAATTTGGTTCACAAGGTCTTTGTCTGACAAAATAA
TCTTTTTTGGTGACGTCACTCAACAATGCCGCCGAAAGTAAGCAAAAACC
GAAAATTTTCTTAGTTCTTTTAAATTGGCATGATGCTCAAGTTGTGAAAA
TTTTCAGGTGTCAAAAATTATTTTATTTTGAAGCTAAATAAAAGTTAGGA
AATTACAAAAAAATTCACGTCAAAAGCTCTATTATTTCAGGAGTTATTAA
CATTCGTTTCACCACCGAACAGAAAAAGCTCCCTCCCCTAGCACGAATAG
AGTTAAGAGGCGTGCCTTCTTCCTATATCATAAAAAAGAAAGTGTTAAAT
TATTG

Coding sequence (CDS) from alignment at sc0000226:133127..143181-

>TCONS_00016124 ID=TCONS_00016124|Name=TCONS_00016124|organism=Clytia hemisphaerica|type=CDS|length=2835bp|location=Sequence derived from alignment at sc0000226:133127..143181- (Clytia hemisphaerica)
TGAAGATCATGCTTCTATCAAGATGAAGGGGAAAAAGGAAAGAGGCTTGG
AAATCGAAAACAAAGCAGACGCTCCTATTCAAGGAGCTTTTCAACCAAGA
CCTCAGGTATATATTATTTTTTAGAGGCTACTGCAAAGCGAATACAATAC
GATCGAGATTTCTTACTGAAATTCCGTTACATCCCGTTTTGCATCTCAAA
ACCAGCCAACTTACCAAATATTGATGTCGTTCTTGATACTGCTCATCAAC
CAACTAAACCCTTAGCTCCTTGTCAAAGGTTGGTAAGAAGAATAAGAAGA
GTGTACATTGGTTAGAATTGGTTAATGAAGGTCAAAGCTGAACTCCGGAA
TAGGTCAAACTAATCAAGCAGTCGACAGACGAGATGACAAAAGAAACACA
GACCTGTCGCCACCTGCCAATGATAAAGATAAGACGAGGGCGAAAACCAA
GTCGATTTTTTTCGATGAAGTTGACGAATTCGCGGGTGTTCTTTTCGTTC
GACAGAAGCGATCAGAAAATGCTTGGGTCCTACCTAGTGACCAAGACAAA
GACTTACCTGGTCAAAGTGAAGATCATGCTTCTATCAAGATGAAGGGGAA
AAAGGAAAGAGGCTTGGAAATCGAAAACAAAGCAGACGCTCCTATTCAAG
GAGCTTTTCAACCAAGACCTCAGGTATATATTATTTTTTAGAGGCTACTG
CAAAGCGAATACAATACGATCGAGATTTCTTACTGAAATTCCGTTACATC
CCGTTTTGCATCTCAAAACCAGCCAACTTACCAAATATTGATGTCGTTCT
TGATACTGCTCATCAACCAACTAAACCCTTAGCTCCTTGTCAAAGGTTGG
TAAGAAGAATAAGAAGAGTGTACATTGGTTAGAATTGGTTAATGAAGGTC
AAAGCTGAACTCCGGAATAGGTCAAACTAATCAAGCAGTCGACAGACGAG
ATGACAAAAGAAACACAGACCTGTCGCCACCTGCCAATGATAAAGATAAG
ACGAGGGCGAAAACCAAGTCGATTTTTTTCGATGAAGTTGACGAATTCGC
GGGTGTTCTTTTCGTTCGACAGAAGCGATCAGAAAATGCTTGGGTCCTAC
CTAGTGACCAAGACAAAGACTTACCTGGTCAAAGTGAAGATCATGCTTCT
ATCAAGATGAAGGGGAAAAAGGAAAGAGGCTTGGAAATCGAAAACAAAGC
AGACGCTCCTATTCAAGGAGCTTTTCAACCAAGACCTCAGGTATATATTA
TTTTTTAGAGGCTACTGCAAAGCGAATACAATACGATCGAGATTTCTTAC
TGAAATTCCGTTACATCCCGTTTTGCATCTCAAAACCAGCCAACTTACCA
AATATTGATGTCGTTCTTGATACTGCTCATCAACCAACTAAACCCTTAGC
TCCTTGTCAAAGGTTGGTAAGAAGAATAAGAAGAGTGTACATTGGTTAGA
ATTGGTTAATGAAGGTCAAAGCTGAACTCCGGAATAGGTCAAACTAATCA
AGCAGTCGACAGACGAGATGACAAAAGAAACACAGACCTGTCGCCACCTG
CCAATGATAAAGATAAGACGAGGGCGAAAACCAAGTCGATTTTTTTCGAT
GAAGTTGACGAATTCGCGGGTGTTCTTTTCGTTCGACAGAAGCGATCAGA
AAATGCTTGGGTCCTACCTAGTGACCAAGACAAAGACTTACCTGGTCAAA
GTGAAGATCATGCTTCTATCAAGATGAAGGGGAAAAAGGAAAGAGGCTTG
GAAATCGAAAACAAAGCAGACGCTCCTATTCAAGGAGCTTTTCAACCAAG
ACCTCAGGTATATATTATTTTTTAGAGGCTACTGCAAAGCGAATACAATA
CGATCGAGATTTCTTACTGAAATTCCGTTACATCCCGTTTTGCATCTCAA
AACCAGCCAACTTACCAAATATTGATGTCGTTCTTGATACTGCTCATCAA
CCAACTAAACCCTTAGCTCCTTGTCAAAGGTTGGTAAGAAGAATAAGAAG
AGTGTACATTGGTTAGAATTGGTTAATGAAGGTCAAAGCTGAACTCCGGA
ATAGGTCAAACTAATCAAGCAGTCGACAGACGAGATGACAAAAGAAACAC
AGACCTGTCGCCACCTGCCAATGATAAAGATAAGACGAGGGCGAAAACCA
AGTCGATTTTTTTCGATGAAGTTGACGAATTCGCGGGTGTTCTTTTCGTT
CGACAGAAGCGATCAGAAAATGCTTGGGTCCTACCTAGTGACCAAGACAA
AGACTTACCTGGTCAAAGTGAAGATCATGCTTCTATCAAGATGAAGGGGA
AAAAGGAAAGAGGCTTGGAAATCGAAAACAAAGCAGACGCTCCTATTCAA
GGAGCTTTTCAACCAAGACCTCAGGTATATATTATTTTTTAGAGGCTACT
GCAAAGCGAATACAATACGATCGAGATTTCTTACTGAAATTCCGTTACAT
CCCGTTTTGCATCTCAAAACCAGCCAACTTACCAAATATTGATGTCGTTC
TTGATACTGCTCATCAACCAACTAAACCCTTAGCTCCTTGTCAAAGGTTG
GTAAGAAGAATAAGAAGAGTGTACATTGGTTAGAATTGGTTAATGAAGGT
CAAAGCTGAACTCCGGAATAGGTCAAACTAATCAAGCAGTCGACAGACGA
GATGACAAAAGAAACACAGACCTGTCGCCACCTGCCAATGATAAAGATAA
GACGAGGGCGAAAACCAAGTCGATTTTTTTCGATGAAGTTGACGAATTCG
CGGGTGTTCTTTTCGTTCGACAGAAGCGATCAGAAAATGCTTGGGTCCTA
CCTAGTGACCAAGACAAAGACTTACCTGGTCAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009012XLOC_009012Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016124-exon-sc0000226-1575043694:143118..143181TCONS_00016124-exon-sc0000226-1575043694:143118..143181Clytia hemisphaericaexon
TCONS_00016124-exon-sc0000226-1575043694:142280..142454TCONS_00016124-exon-sc0000226-1575043694:142280..142454Clytia hemisphaericaexon
TCONS_00016124-exon-sc0000226-1575043694:135837..135888TCONS_00016124-exon-sc0000226-1575043694:135837..135888Clytia hemisphaericaexon
TCONS_00016124-exon-sc0000226-1575043694:134674..134827TCONS_00016124-exon-sc0000226-1575043694:134674..134827Clytia hemisphaericaexon
TCONS_00016124-exon-sc0000226-1575043694:133127..133869TCONS_00016124-exon-sc0000226-1575043694:133127..133869Clytia hemisphaericaexon
TCONS_00016124-exon-sc0000226-1510915933:143118..143181TCONS_00016124-exon-sc0000226-1510915933:143118..143181Clytia hemisphaericaexon
TCONS_00016124-exon-sc0000226-1510915933:142280..142454TCONS_00016124-exon-sc0000226-1510915933:142280..142454Clytia hemisphaericaexon
TCONS_00016124-exon-sc0000226-1510915933:135837..135888TCONS_00016124-exon-sc0000226-1510915933:135837..135888Clytia hemisphaericaexon
TCONS_00016124-exon-sc0000226-1510915933:134674..134827TCONS_00016124-exon-sc0000226-1510915933:134674..134827Clytia hemisphaericaexon
TCONS_00016124-exon-sc0000226-1510915933:133127..133869TCONS_00016124-exon-sc0000226-1510915933:133127..133869Clytia hemisphaericaexon
TCONS_00016124-exon-sc0000226-1491911889:143118..143181TCONS_00016124-exon-sc0000226-1491911889:143118..143181Clytia hemisphaericaexon
TCONS_00016124-exon-sc0000226-1491911889:142280..142454TCONS_00016124-exon-sc0000226-1491911889:142280..142454Clytia hemisphaericaexon
TCONS_00016124-exon-sc0000226-1491911889:135837..135888TCONS_00016124-exon-sc0000226-1491911889:135837..135888Clytia hemisphaericaexon
TCONS_00016124-exon-sc0000226-1491911889:134674..134827TCONS_00016124-exon-sc0000226-1491911889:134674..134827Clytia hemisphaericaexon
TCONS_00016124-exon-sc0000226-1491911889:133127..133869TCONS_00016124-exon-sc0000226-1491911889:133127..133869Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016124-proteinTCONS_00016124-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000226supercontigsc0000226:133127..143181 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.92065	2.15565	2.37982	2.28814	5.96214	3.90039	2.56249	3.00961	2.47355	4.72823	2.57048	2.2204	7.20703	4.6805	4.54764	4.85823	4.4071	3.40232	6.97259	10.9243	3.08332	3.38385	3.73956	4.15531	7.04234	6.49347	5.71441	6.3107	2.13178	1.51653
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016124 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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