TCONS_00016096 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016096
Unique NameTCONS_00016096
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4886

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016096 ID=TCONS_00016096|Name=TCONS_00016096|organism=Clytia hemisphaerica|type=transcript|length=4886bp
tgaaaatttaagattttcttttttgaaattgaaaatcataGTATTTGATT
ACTGtattgatttgtttttgtttactgCTGCATGTGGAAAGATACGAGGT
GGATAGATACAATAATTATTATAATGAACTGTTGAAAATTGATCTAAGGA
TTGACGTTAAACATGTACACACTGCAAGGACTTGCATTACTGGTGATTCT
GATACCATGCATCGCATGCATTCAAATCGAAGATAATCGACAGCACAGTG
AAGGAGTGCAATCAATACCTTATTTAGATGACGTTGTCTCTTACCTTATG
GACCCTCACACGGAATTCGATGATGGTGATGAATCGGAATTCGATTCTGT
TGGACACAACGAGAAAGAAACATCCTCTAATGAGGAATCACCAGGAATGA
TGGATGGTGAAATGGAGAAGGCGAAAGAGGAGAAGAAAAGTAAAATCGAA
TCGGTTGATGAAGATGATAATCTGTTCACAGGAATGAAACTGGCCAACAT
CAACCGTGACTTATTGACAGTACGTGACAAAATTACACGACATCTTGACG
ACACTGCTAATAAATTAACGACAAATAACGACAATACCGATCCGTACGAC
TCCAAAGTATCCGACAAAGACCAGAATCTTCAAGTGACGAAAAATTTGAT
CGGTTTATTATATGACTTCAAAGGGAAGAAACACAAAAGACCACATACTG
GAGATGACGATTTGATGGACCTCGATGGCTCCAAGAAAGATGACATCAAA
CCAATCATCTCCAAAGCCAAAGGAGACAAAGAGAAGATTGACGTCACAGT
CAATGTTAACATCAATGGAATTCCAAAAACCaagaaaaagaaatccaaaG
TCGAAACATCAACTACGTCATCAAAGAAATCTGACACACCTACCAAAACA
TTAAACTCgacaaaagaagaagaagaacctGCGGACAAAAGAAGTATCGT
TCGCGCTAATAAGGTATCGCCAACTATTACATCCAACAACAACAAGCTAT
CGAAGGTGACAGGAGGTGTCCAAGCAGACAACGATAATGATGGtgatgat
gataatgatgatgaCGAGGATGACGAAAAAGATGTCGAGAAAACCAGTGA
AAATAAACGACATGAGGGAACCGAAGCTAAGACTAAGGTGAGCAGTACAT
TAGCACATTTGAAGGACGTTAAAGCACCACCAGCTTTGGTCAAtcaattg
aagaagaaaatacaagaagaagagaaagagaATGACTCAACATCGGAAGG
agatgatgatgacgatgatgatgaagatgatACGTCGGGATCGGGACATG
TTGAAACTGCACCGATGATGATGGCGACGGATAAGAAAAACGATGTCAAA
GGAGAGAATGCTGGATTGATTGGTTCAAAACTTACAACTGAGGAAAATAC
AGAAAAACTTGGAAATAATGTCCACCCAGACTTTAAGAACAGCTCACTTT
CAGCTGCCACGAATGCTCAAGAGCCAAGTGAAAACGGAGAAGCAGCTACA
TtgaaaaaatctgaatcgaCCAAACAATTTGCTCCAAAGCCAACCAAAGA
CATGTCATTAGAAGAAGTCGGTAAACACATCAAGAAATGgcaagaaaaca
agaaaagcGAAGATGTGGATGTCGAATCTGATGAAGGCACCACAAGGagt
tggaaagaagaaaaacaaaaacttgtCCGGAAATTGAAGAATCCGTTGAT
GGAGGGAGTTGACGAAGAAGGTGGAGATGTAGAAAACGAAGGAGCTGAAG
AAGCCAGTGATATCACCAAAAGTGCTGACGATGCATTTACCAAAGTTGTT
GATACGGTCACCACATCCGCACATGtacagaaattgaaaaaatcgcaaga
aaaagatgtaaaagagGTAGCAGCAAGTGCTGAGAAAGCATTTTCAAACG
TTGTGAACAACGTGATGAGTGGAAAAGCCAACGAAATCTCTTTGAATCAC
CATGCATTGACAAAGACTGCAAATGAACTCATCTCAAATGTCAAAGATGC
ATCTCATGGAGCCAATATGAAGAAATTACTGaaattcaaaacacaaattC
TCAGCGAGATCAAGAAAATCAGTAAATTGCAGAAACAGTATGGTTTTAAA
GCTAAAGGGGCTGGTGATCTGACCGAAGCTAGATCAGTGTTGGAGAAAGA
TTTGAAGGTTGTCAGCGAACTGGAAGGCAGATTGAAGAATCAACACAAGC
AAGCTGAAGCTGCCAACCATGACCAGAAAGCTTTTGGTCAATTCGCTAAG
AGTGATTCTGAAACAATTCCTGATGAAACGTTAGGTTTTTCTTCTGAAGA
CGATACTAAGCAAACCAAAGCTGCTGGAAAATCGAAAGGAGGAAACaaca
aattgaaagaaattcaaCAATTACTGAAAGCTGAAATTAAAcgattgaag
aagaagaagactgGAAAACCAGATCCACAATTGAATGATATCCGAAAAAT
GgttcaaaagaaattgaaagggTTTTTGAAGAATGGAAACCTGGATAAAA
ATGCGTTTAAAAAATTAGCACCGGAGATCAAGGAGTTGGGTAACCTGCTG
AAACATAGAATCAAAAATGCGAAATCATACCACAAGAAAGTCATGAAAGC
TACTAAGGCTGCTACTAATGGTTTCGCTCCAGCACCTGTTACACATAAAG
gtttaaaagaagttttgaaCCAAGCTCAAACCCTACTTTCGGCTACCTCA
CCACACAATGATTTACTCCAACAATCAATGACTCTGCAGGCTGCCAAGAA
TGCTTTGACCAGAATCAAATCCAGCAACGTATCACTTGTCGGAAGCCAAA
GCAGTAAAATGAAATCTCTATTAACTTCCCTAAACTCAAAACTTGGTAAG
GTTTTCCAGCATGGTGGCTTCATGCAGAAGCCTCAACAACAACAAGGGCA
AGGACAACAAAGTTATGATCAACTTCACCAAATCCAAGGGATGAACCCAG
CAGGTCAAGCCGTTCAAGTACCATCCTCATTTGTCCAAGCATTCAAACCG
AGACCTGGAGAATCTCTTTTGTTGCCCAAATCTCCTTACCAAGCTCAAGC
TTTAGCCAAAGCCGAAACACCAGAACCTGATTTCGATCCAGATCAAACAA
AACCAATGGCTGGAGCAGAGCCTGTCAACACATTGATCGATGCATTGGAA
AGAGATATCACTGAAGTATGGTCATACAAAGATCAATTCCAAAATGCAGA
ATCTCTTGGATTAGACAACGAAAAGGTCCACAATGCATATGCCAACTTAG
GATCATTATCCGGGTTAAGTTTGAGAAGAGCTTTAGATCGAGCACTACGA
GGCGAAGATGTCGGTCTTGCAATTGTCGGTGGTTCCATCTCTAAAGGAGG
TCCTTTCAGTGAAAAAGGAATTGATTACATTTTGAAATCATATTTTTATG
CTATTGAGGATTACTGGAATAAGATCATTCGTCCGGTCACTGGCTCCTCC
TTGATTGTCCGGGATTGCTCCATTGGGGGTATCGCAACTGATTATTATTC
ATACTGCTTAAGAAGTCATTTACCCGACGATAAATTAACCAATATTGTCC
TTTGGGAATTATCGGCAAATGATATGAAACGATTTGAAGAATCTGGGAAA
AGTAGAACTCAACCTTTGGAACAGTTCGTTAGAAACGTCATCTCGTACCG
TGCTAAACCATCCTTAATATTCGTCAACTTTTTCGCAAACTTGGATTGGG
ACGCCGATATGGCCGCTCATTGTCGTAACTTCGAAGACGAAGGAGGAGAC
GATATTGCTAAATACTACAAAATCACAAGTCTCAGCTGGCGAAACATGGT
TTGCCCTGAACTACAATCTGGATCACCTCTCTTCACAAGAGATAGGCTAT
TCTCAGAAGATAAATTCCATCCGTCAATCCAAGGGCATGCACAAGTCGCA
TATCTTCTCATTGATTACATCCGAACAGAGTTCCTGAAGAATCTGGTCAA
AATGAGAACGACGAATATTGAAGATGCCGTCACACGTCTACAAATCCCAC
ATTCTGTCTATGTGCCACGCCCGTTATTCCGTGATACAGTTACATGGAAA
CCTCTCTGTTACACTTACATGCTGACTGATGATAAAATGCCCAACAATAC
TCTACAGCTTGATACATCCGCAAGTGGTTCATTCAAAAGTGTAGTTGTCC
GCGCGTTCAAAGTGCGTTCAGATAAGATAGCAGGTATGAATACGCAAGAT
AACGATCAACACGTCAGCTATACTATCCACCTACCCCCACATCCTGGAGG
TGGAATCCAACCCTACAGAAGACTTGGAATCATGTCTTTCACCGATAACA
GAAGTGCAAATATTCAATTTGATGCAGAACCAACTCAGACCATAGAAACA
GGGAAAAGATTCTTGGAAGGAACCACCATCAAATATATAGCAAAAGACAT
TCGACCCGGTGATCACCAGCTCTCTGTTAGATCTGGAAATAATGGATTCT
TAGTATGTGCTATTCTTGTTGGGTAGAATGGAAACGAGCTTAAGACTCTT
GATAGAGGAAAGAGGCTAGCAAGACCCCCTGACAGACAATGGTTTACGCA
AGAAAAACAATTAGAGAAAGAAGAGTAGGAAAACTATCATTTCCAATCCC
AAGAATCCGTTTAGGCTTCTTTGGTGTTACATCAGGGACGCCTTGTAGTT
GAATATTCTACTGTAGCATTGCAATTAAAAGTGCGAAGAGAACACTTGTA
TATTGGAGCTTCGGGACCtttaaaacaaataattttagAGTTCTATGTAT
ACCAATACTTTGCTaacaaatagaaattttatcaatttataGATTGTAAA
TAGTGATATATAGATCATACATTTATTATTCGTAAGAATTCCAGAAAAAA
CGAAGAaagcttatttttattcatcatTTGTTGATG
Run BLAST on NCBI

transcript from alignment at sc0000226:254239..266911+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016096 ID=TCONS_00016096|Name=TCONS_00016096|organism=Clytia hemisphaerica|type=transcript|length=12673bp|location=Sequence derived from alignment at sc0000226:254239..266911+ (Clytia hemisphaerica)
tgaaaatttaagattttcttttttgaaattgaaaatcataGTATTTGATT
ACTGtattgatttgtttttgtttactgCTGCATGTGGAAAGATACGAGGT
GGATAGATACAATAATTATTATAATGAACTGTTGAAAATTGATCTAAGGT
AAACTCAAAGTTGAAATTCAGTAAAGTCTGGAATTCTAGAGGGGATATTG
TTTTGACAATGGGTCACTAAACGTAGACAAAAATTCATACTGGAGAGTAA
AACTTCATGAATTATCTTATGAGTGGATAATAatagtgtcataaaaatct
actcTCCCACACAAATTTTGGACCCTTCTTGTCTAGGTTAATGCTAAAGG
TTGTcttcttacatccctgtctcaaacCTCCAGTTTTTTCCTTAgtgagg
ataaaaattctattgtttaaaaatccATTGGACTGATTTTGGAGTGCaac
ttttaaacattgaatttcgagtggaaACCCGTTCAAAACCCGTTCAACCC
GTTGGGgttgaaattccagggtattttcccatcgGGGACAAAGATTTTGC
CAAGTTTTCCATTTGatctggggtcccagcgggtctgtgacacaggggtg
ccTTCTTTAAAGGTATTACACAGtgtttttccttgaaaaagcccATTATC
TCAACTTGTTTCATGATTTCATTAAACAGGATTGACGTTAAACATGTACA
CACTGCAAGGACTTGCATTACTGGTGATTCTGATACCATGCATCGCATGC
ATTCAAATCGAAGATAATCGACAGCACAGTGAAGGAGTGCAATCAATACC
TTATTTAGATGACGTTGTCTCTTACCTTATGGACCCTCACACGGAATTCG
ATGATGGTGATGAATCGGAATTCGATTCTGTTGGACACAACGAGAAAGAA
ACATCCTCTAATGAGGAATCACCAGGAATGATGGATGGTGAAATGGAGAA
GGCGAAAGAGGAGAAGAAAAGTAAAATCGAATCGGTTGATGAAGATGATA
ATCTGTTCACAGGTAAGCAAAATGTTCAGAAATTGAAATATCAGACTACT
TCATcgtgtgaaattcatcaaaacttTCGTGAAAAGCATAAAAGTCAATG
CGGATACCaccttattttcaaaaattttgccaggATACTTCAACGTTAAG
CCACATGGTTTTATTTCTGTGTCCTTATGCTTTCACATCAAATTGATAAT
GCGGTGTTATTGAGGGGATACATATTGAAGAGTAAATATTGTTTGAAAct
atcattttattttgaataaatatccGCATTAATTTTGATATATCTCGATA
GATTGAAATTCTACACTAACCCGATATCCCATTCGGATGGGAGAATTCCT
CCTTTTAACAAAACCTATCAAGACTGATAATCTCAACTTTTGCAGTGAAC
AGAGAGACGGAGAAATTTCATCATCGTgacaaaatctacaaaaactttta
gattttaacCACTTACAAAAACAATATATGTAACTAACATATTTTCATCT
CCAGGAATGAAACTGGCCAACATCAACCGTGACTTATTGACAGTACGTGA
CAAAATTACACGACATCTTGACGACACTGCTAATAAATTAACGACAAATA
ACGACAATACCGATCCGTACGACTCCAAAGTATCCGACAAAGACCAGAAT
CTTCAAGTGACGAAAAATTTGATCGGTTTATTATATGACTTCAAAGGGAA
GAAACACAAAAGACCACGTAATTTAAATTATTCTTCATGCAATAAAAAAA
TCCGAGCTTTGTCTTGTTTTCCGGACTACATTATTAATCTAATTCTTAGA
CTATGctatatagtctaagacaaatcacttcactatctaagaaataggcc
caaagccgaagaaaattcgcaaacgggcattttgccgaaaagagtttttT
CCGTaaaccgccataacgccatgccgccatattttcccgcctttgctatc
actgtaacggaagATAACATCGTCTATCTAATTCTTAGAAATAAGAACAG
TTACAAGCTGAACAGTAAGATAATAATTCGTTAAAACGTGAAAAAGGGCT
GACGTGTTTGTGGTATAGGGGGATTTGAAACCAATAGAACAAAACGAATG
AAAGGTCATCTGTTTGAACCATCCATGTTATCATTTGAGAATTACtgaga
aaaaaaacagcaaaGGTTATTGTGACTGACAATGAAAGGTAAATCGAACG
AGGTTGCAAATCCTGGTGCAgatatttcaatgttttcatttcattttctc
tttcagATACTGGAGATGACGATTTGATGGACCTCGATGGCTCCAAGAAA
GATGACATCAAACCAATCATCTCCAAAGCCAAAGGTAAGGATATTTGGAT
ATTTTGATAATGTGTTAGAATTGAAGATGTATAAGATGTGGTTCACAGAG
AATATGTATACTGATTTtgcagcccgggggggggggggacNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAAtaaggggtatgtgcggacgggacctccgaa
aaccgacccttagagagactgatttttgctgaaaaggtgacccttagaga
gactttttgaatttctttttacgatttttgaaaaaagtcatacccttaga
gagagttTATTACAATtctttctctggaaatcaaaaaatttcctaaaaat
cctgaattttccgacccttagagagactaatttaaaactttctgattttt
ccgacccttagagaaactttgaaaggtgaaaaaaccgacccttaccgtcc
gcacatacccatcatacATTTTTACCTaagttcccccccccccggatttt
GCAGTTATATAAAAATAAGCATGCTTAAAGGGTTAACAGTTGACACAGTT
GATAGAGCAATTAATGTTTGTCAACTAAGTTAAAACAAAGCTCTGGCGAT
GCATAAAGATCTTTAATTAAATAGTACAACCATCCTATCTAAACATGGTT
TCATGGTGAAACTCAACTCATAGATTTTTATCCAAATATCTTCACTCAAG
AACCTTTCTTAAAGAGaggttttgttggtttttgttgttttttctagttt
gatgaaatttcttcctttaaagaaTATAGTTATGCAAAGCAAAATATGCA
TTTAATCTTTGTTCCGATGAATGATCAATCTGATTTGTTTTTCAGGAGAC
AAAGAGAAGATTGACGTCACAGTCAATGTTAACATCAATGGAATTCCAAA
AACCaagaaaaagaaatccaaaGTCGAAACATCAACTACGTCATCAAAGA
AATCTGACACACCTACCAAAACATTAAACTCgacaaaagaagaagaagaa
cctGCGGACAAAAGAAGTATCGTTCGCGCTAATAAGGTATTGTGCTCGCT
TTGCTGCAAAATCGTATTTGtcaactacagttgacgctctctaattctaC
GTTCTCCTATTCGatacactcccttattcgatgaaaatccaattcccctt
gaagatcaaattatagagcgtcaactgtagctATTTtgtcaaccttgaaa
acctAAAATGCTTAAAACTAGGGCATCCTAAATCTATATCACAATCTATG
GTTAcacattttcataatttaccCCTTTTAGCCTCAACTAGAAAGAAACT
TCAGTGACTGCCAGTAGCTGTCTGCCTATATCTTCAATGTCATGATTTGG
TAAAAAGCGAATGAAGACAGACGATCTGGCTACTTGTGTCTTCTTTGAAG
ACGGGGTCAATTACGCCAGCCTGCTCATATTTTTCCCAACCAAAACTCTT
CATTGAATCATATATACAAGTTTGTACACGTAGTAAATATCTTCACTCAT
GGAAAACGTCTTTTTCTCCTCTCATAGGTATCGCCAACTATTACATCCAA
CAACAACAAGCTATCGAAGGTGACAGGAGGTGTCCAAGCAGACAACGATA
ATGATGGtgatgatgataatgatgatgaCGAGGATGACGAAAAAGATGTC
GAGAAAACCAGTGAAAATAAACGACATGAGGGAACCGAAGCTAAGACTAA
GGTATATAAGATTGATCATAAAAATTTTTATCTAGAGCTAAATATGGTAG
GCCACTAATGGAACTGGACTATATGGCCGGGAAAAAACATTGCCAGTTAA
TTTGTACCATTTGcgttcgttttttttttgactggaaTGTGAAATCCCCT
TATAATGTTACCGTATGACTGTGAGAATtacaagtgaatgtacctttgCT
AGGACCAACTCATTCAAAGCCAAAAGTGAAAGCGAAAACCTTCGAATCAC
TTTTTCATATACTTTAAAGGGTTTTTACCAGCTGAACTACTCAAATTCGA
TCAAACAGTAATTTCTTCTACATAGGTGAGCAGTACATTAGCACATTTGA
AGGACGTTAAAGCACCACCAGCTTTGGTCAAtcaattgaagaagaaaata
caagaagaagagaaagagaATGACTCAACATCGGAAGGagatgatgatga
cgatgatgatgaagatgatACGTCGGGATCGGGACATGTTGAAACTGCAC
CGATGATGATGGCGACGGATAAGAAAAACGATGTCAAAGGTTACAAACAT
TTTAACAAATAACATCTCTGTATCAGTGGCTCCTATGAGGATTTTTTAGT
TAGTTAGGATTTAATAAAGAAGTTTTATGTTAACGGTAAAGGAATAAGGT
TGCCACCTCTCTTGTCAAAGACCAAggtttttttggtaaaaattgcGTTC
TTGGTTGGAATGTGAAGTCAGTGTAGTTCTGGAGAAGaatttttaaggta
tttttctctCAAACTCTCAATTATTTGGCCGCTTTATCCAGTGGGGAGAT
GCAATGAAGTAAACGGAAGACTGGAAACGAATCttcaatttcttattttt
ccctCTTTAGGAGAGAATGCTGGATTGATTGGTTCAAAACTTACAACTGA
GGAAAATACAGAAAAACTTGGAAATAATGTCCACCCAGACTTTAAGAACA
GCTCACTTTCAGCTGGTAAGGGAATCGTAATAATACgtaaatactatttt
tttcctTATTAACAACCAAACCAGCCCTGAGACAAGCCAATAACtatctt
tgaaaatgaaaagccTGTTAGATATGCAGAAAAGGACAGCCTCTGACCCA
ATAAGGTTAAATGCTAACTCCAGCCCTAAGTCAAAAATCGGCGAACTGCT
TATAAAAACGTGCAGATTAAAacgaaaatcataaaatcaaagTAGCATAG
CTTAGATGATATCGATCCAATATGAAGTTAAATCTATACTCAAAATATTG
ACAATTTCCTTCATTCAGCCACGAATGCTCAAGAGCCAAGTGAAAACGGA
GAAGCAGCTACATtgaaaaaatctgaatcgaCCAAACAATTTGCTCCAAA
GCCAACCAAAGACATGTCATTAGAAGAAGTCGGTAAACACATCAAGAAAT
GgcaagaaaacaagaaaagcGAAGATGTGGATGTCGAATCTGATGAAGGC
ACCACAAGGagttggaaagaagaaaaacaaaaacttgtCCGGAAATTGAA
GAATCCGTTGATGGAGGGAGTTGACGAAGAAGGTGGAGATGTAGAAAACG
AAGGAGCTGAAGAAGCCAGTGATATCACCAAAAGTGCTGACGATGCATTT
ACCAAAGTTGTTGATACGGTCACCACATCCGCACATGtacagaaattgaa
aaaatcgcaagaaaaagatgtaaaagaggtatagaaaatattttttctta
attATTTCCGGACAGAAGAAGTTTTCGTGCGTTTTTTGATGAAACTTCAG
CATGCGAGACTCCATGCGATATATAGTTTGGCCCCTATATGGTCCACAAC
CAACGAGTAGAAGAAGGATTAaagcaacgatgtaaaaataatagataacc
aactacctctagaaggcacttctcccaagagaacaaccattgttttccta
ttgaaatgagcactcctttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNtcatctggataaataaacgctcataaaatg
ctgttatctgaaaaatatatgtgtgatttgaagtgcgatacctcacgaat
gaaaagtgcatgaaggttgcctgatacaaaataaacagatgaatgtgtat
agaacaataatatctaattaaaaaattccttctgtgaggctgcctatagg
aaaatacactttttctaacccaaattttggaaaaatatacatcacgtgat
cgattctgtccaatagaaggttgcaaatgaaggaagtttttatttaattg
cactttttacgatgcaaaatgtcattaatatttttacaaccgtaacacgg
atgtttttcgagaatcaaggcaagttggttatctattatttttacatcgt
tgattaAAGGATAGGATCGGAACCTATGGATATATTATCGACCGCCCTGA
AGGCGGTCCCACCAGTTTTGTATACGgtgaaaaatctcatttgctcgaAA
TCGGTAGGCCAATTGTCGCATATGAGTGCAATACTGAGGAGATAATAACA
ATTTCGATTACCTCCGTAATATATTAACCGCGTgaccaaatttaataaaa
cgcgggaaagaaCTTTTGCAAGTCACTCAATNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
CAATAGTTTTTAACGTGtaatactctcgggtatctaattacttttgattg
aaaacaatttacctttcggtaattagttattataaagtaaacaaaggatg
gtgaaaaatatgagcatttttatttttattataagcatctactttataag
aatcaaatcaaaaactcttgCTTAAAGGCaatttacctttcggtaattag
tttttacaaagtaaacaaaggatggcgaaaaatatgagcatatttatttt
tcttataagcatctactttataagaatcaaatcaataactcttgattaaa
ggcaatttacctttcggtaattagtttttacaaagtaaacaaaggatggc
gaaaaatatgagcatatttatttttcttataagcatctactttataagaa
tcaaatcaataactcttgattaaaggcaatttacctttcggtaattagtt
attatgAAGTAAACAAAGAACTATTGAGTAATTAATTGACTGCTTAAGTT
AACAAAATGTGAGATTCTTCCGGTTTGATCAATTGGTATTTTAAGCAACT
TTACTTAGTTtgcaaatttttaatctcaaaaatcaaacagaCGGGTGGAA
AGataattataaaaatcaaaatgagtTTAATCAAATTTTCAGGGCGGTCG
CACCAGTGGGTGAAATGACTTTTCAGCCACTGTACTAGTATATTCTAAGA
AAAGGGAACGTAAAAGTCAATGTATATTTGTGTCAAAAATTAAAAGTGAA
CATTAAAAACACAGTAGTGTGTGCGACGTTTCGACGGTTGTCTTTATCAA
GTATTCTAAGAAAAGGGCATGTACTATAGTATGATGAAAGTTGAGTTTAT
AAACTTTGTTGGAAGAAAAACTGCCTATGTTATTAAGATTGCATTGTCAT
TTGTATCTTATAGGTAGCAGCAAGTGCTGAGAAAGCATTTTCAAACGTTG
TGAACAACGTGATGAGTGGAAAAGCCAACGAAATCTCTTTGAATCACCAT
GCATTGACAAAGACTGCAAATGAACTCATCTCAAATGTCAAAGATGCATC
TCATGGAGCCAATATGAAGAAATTACTGaaattcaaaacacaaattCTCA
GCGAGATCAAGAAAATCAGTAAATTGCAGAAACAGTATGGTTTTAAAGCT
AAAGGGGCTGGTGATCTGACCGAAGCTAGATCAGTGTTGGAGAAAGATTT
GAAGGTTGTCAGCGAACTGGAAGGCAGATTGAAGAATCAACACAAGCAAG
CTGAAGCTGCCAACCATGACCAGAAAGCTTTTGGTCAATTCGCTAAGAGT
GATTCTGAAACAATTCCTGATGAAACGTTAGGTTTTTCTTCTGAAGACGA
TACTAAGCAAACCAAAGCTGCTGGAAAATCGAAAGGAGGAAACaacaaat
tgaaagaaattcaaCAATTACTGAAAGCTGAAATTAAAcgattgaagaag
aagaagactgGAAAACCAGATCCACAATTGAATGATATCCGAAAAATGgt
tcaaaagaaattgaaagggTTTTTGAAGAATGGAAACCTGGATAAAAATG
CGTTTAAAAAATTAGCACCGGAGATCAAGGAGTTGGGTAACCTGCTGAAA
CATAGAATCAAAAATGCGAAATCATACCACAAGAAAGTCATGAAAGCTAC
TAAGGCTGCTACTAATGGTTTCGCTCCAGCACCTGTTACACATAAAGgtt
taaaagaagttttgaaCCAAGCTCAAACCCTACTTTCGGCTACCTCACCA
CACAATGATTTACTCCAACAATCAATGACTCTGCAGGCTGCCAAGAATGC
TTTGACCAGAATCAAATCCAGCAACGTATCACTTGTCGGAAGCCAAAGCA
GTAAAATGAAATCTCTATTAACTTCCCTAAACTCAAAACTTGGTAAGGTT
TTCCAGCATGGTGGCTTCATGCAGAAGCCTCAACAACAACAAGGGCAAGG
ACAACAAAGTTATGATCAACTTCACCAAATCCAAGGGATGAACCCAGCAG
GTCAAGCCGTTCAAGTACCATCCTCATTTGTCCAAGCATTCAAACCGAGA
CCTGGAGAATCTCTTTTGTTGCCCAAATCTCCTTACCAAGCTCAAGCTTT
AGGTAAGAGAATCATACATTCAATTCTTGATTAATAAATAAGTGATGTTT
GAAATATCCCTGTTTTGATCCGACAATTGATTACCAACTACTGTGTAGAT
CGCGGTAGCAAATCCACGGCAAATCCATGATGTAATTcttttaaggtttt
tcaccaACCaaaattattatccatatagcggtcattaagtaagccattaa
agattcgaacggcgggcggtattgaaaggttctatgactcaaatagtcat
aNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNatgactcaaatagtcatacccgcgct
gagaaaactaaggcgtcgtgcttcagagggctgaaatatcattaaccgcc
ctggttatagggcaataacgtcatttgtggcccgctcggaactttattga
agtcgttgcattgaagcggtgagactaaaccgacgtcagaaaaaaaacac
tttttggtcatttgcggcccgctcggaactttattgaagtcgttgcattg
aagcggtgagactaaaccgacgtcagaaaaaaaacactttttggtcattt
gcggcccgctcgcaagggtacttaaaacttgttgaagtcattgcattgaa
gcgaaaagacttggcTGATGCTAGAAAAAAACATTGTTTGAATTTCCGAT
Atagataataatagtaatagcgttaagctatcgttcgttgttgtcattaa
ctctgcccttgcagtttgattattagccctctagtgccatttgcgccctc
cgcttcgcgtcgggcccaaatgacactctcGGGCTATTAATCAAACTgtg
cgggcagaaaataacaacaacgacctcaaactgaacgctattgttatatt
atacaAATATGATAGTATGTCAAAGTGAAAGTTTATAGTGCAGTATTATC
TTTTGCGTTCGATGGTCGAGTTGCAAAAATGGTCTggaaattgatgtttt
ttctcTGAGATTTGAATGCATTTAATGTTTtctcaacgttcatctaacgt
tttatGCACCTTATTGGACATTTGATGACCGTTACAAGATCATAACAAGA
ATTGAAATACTAACAAATCTTTTTATCATTTCTTTCCAGCCAAAGCCGAA
ACACCAGAACCTGATTTCGATCCAGATCAAACAAAACCAATGGCTGGAGC
AGAGCCTGTCAACACATTGATCGATGCATTGGAAAGAGATATCACTGAAG
TATGGTCATACAAAGATCAATTCCAAAATGCAGAATCTCTTGGATTAGAC
AACGAAAAGGTTTTTAAGTTTAAATTGTTAATTTAGAAATTAAGGCtgta
ttttaacaaaaatttttagaCCTATGTGCAATTTCAAGCAAGCTATAAGG
CCCCTGAGGGGGGCACTTGTTTTAAAATTAACACAATGCACTTTGTGAAG
CTTGAAAACGCAGCCTTAAGGACCGCACACACGACCAGTCTTTTACCTAG
AGTGCCACACCTGAGGATGAGGATGTGTCAAATTTGTCACAGTTCAAGAA
TGTGAAATCAGGATTAAGTCAGTTTCACTTTTACACCATTAGCTTCAAAG
CATGAATGGAAAAGAAATATTCCATTAGTTTATACTTCAGCGGCAAAAGA
AGACATACTTTTCTTCTTAAGCACATGCATACTCCTTCCCTGCACAGGAA
ATATATACTTGAGCGCCGAGAacaattatataaaaaatgatTCTCCATTT
TCTTACAGGTCCACAATGCATATGCCAACTTAGGATCATTATCCGGGTTA
AGTTTGAGAAGAGCTTTAGATCGAGCACTACGAGGCGAAGATGTCGGTCT
TGCAATTGTCGGTGGTTCCATCTCTAAAGGAGGTCCTTTCAGTGAAAAAG
GAATTGATTACATTTTGAAATNGATCTCAAAAGGAGGTCCTTTCAGTGAA
AAAGGAATTGATTACATTTTGAAATCATATTTTTATGCTATTGAGGATTA
CTGGAATAAGATCATTCGTCCGGTCACTGGCTCCTCCTTGATTGTCCGGG
ATTGCTCCATTGGGGGTATCGCAACTGATTATTATTCATACTGCTTAAGA
AGTCATTTACCCGACGATAAATTAACCAATATTGTCCTTTGGGAATTATC
GGCAAATGATATGAAACGATTTGAAGAATCTGGGAAAAGTAGAACTCAAC
CTTTGGAACAGTTCGTTAGAAACGTCATCTCGTACCGTGCTAAACCATCC
TTAATATTCGTCAACTTTTTCGCAAACTTGGATTGGGACGCCGATATGGC
CGCTCATTGTCGTAACTTCGAAGACGAAGGAGGAGACGATATTGCTAAAT
ACTACAAAATCACAAGTCTCAGCTGGCGAAACATGGTTTGCCCTGAACTA
CAATCTGGATCACCTCTCTTCACAAGAGATAGGCTATTCTCAGAAGATAA
ATTCCATCCGTCAATCCAAGGGCATGCACAAGTCGCATATCTTCTCATTG
ATTACATCCGAACAGAGTTCCTGAAGAATCTGGTCAAAATGAGAACGACG
AATATTGAAGATGCCGTCACACGTCTACAAATCCCACATTCTGTCTATGT
GCCACGCCCGTTATTCCGTGATACAGTTACATGGAAACCTCTCTGTTACA
CTTACATGCTGACTGATGATAAAATGCCCAACAATACTCTACAGCTTGAT
ACATCCGCAAGTGGTTCATTCAAAAGTGTAGTTGTCCGCGCGTTCAAAGT
GCGTTCAGATAAGATAGCAGGTATGAATACGCAAGATAACGATCAACACG
TCAGCTATACTATCCACCTACCCCCACATCCTGGAGGTGGAATCCAACCC
TACAGAAGACTTGGAATCATGTCTTTCACCGATAACAGAAGTGCAAATAT
TCAATTTGATGCAGAACCAACTCAGACCATAGAAACAGGGAAAAGATTCT
TGGAAGGAACCACCATCAAATATATAGCAAAAGACATTCGACCCGGTGAT
CACCAGCTCTCTGTTAGATCTGGAAATAATGGATTCTTAGTATGTGCTAT
TCTTGTTGGGTAGAATGGAAACGAGCTTAAGACTCTTGATAGAGGAAAGA
GGCTAGCAAGACCCCCTGACAGACAATGGTTTACGCAAGAAAAACAATTA
GAGAAAGAAGAGTAGGAAAACTATCATTTCCAATCCCAAGAATCCGTTTA
GGCTTCTTTGGTGTTACATCAGGGACGCCTTGTAGTTGAATATTCTACTG
TAGCATTGCAATTAAAAGTGCGAAGAGAACACTTGTATATTGGAGCTTCG
GGACCtttaaaacaaataattttagAGTTCTATGTATACCAATACTTTGC
TaacaaatagaaattttatcaatttataGATTGTAAATAGTGATATATAG
ATCATACATTTATTATTCGTAAGAATTCCAGAAAAAACGAAGAaagctta
tttttattcatcatTTGTTGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009002XLOC_009002Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016096-exon-sc0000226-1491911889:254239..254386TCONS_00016096-exon-sc0000226-1491911889:254239..254386Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1510915933:254239..254386TCONS_00016096-exon-sc0000226-1510915933:254239..254386Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1575043694:254239..254386TCONS_00016096-exon-sc0000226-1575043694:254239..254386Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1491911889:254918..255250TCONS_00016096-exon-sc0000226-1491911889:254918..255250Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1510915933:254918..255250TCONS_00016096-exon-sc0000226-1510915933:254918..255250Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1575043694:254918..255250TCONS_00016096-exon-sc0000226-1575043694:254918..255250Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1491911889:255743..255955TCONS_00016096-exon-sc0000226-1491911889:255743..255955Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1510915933:255743..255955TCONS_00016096-exon-sc0000226-1510915933:255743..255955Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1575043694:255743..255955TCONS_00016096-exon-sc0000226-1575043694:255743..255955Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1491911889:256495..256572TCONS_00016096-exon-sc0000226-1491911889:256495..256572Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1510915933:256495..256572TCONS_00016096-exon-sc0000226-1510915933:256495..256572Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1575043694:256495..256572TCONS_00016096-exon-sc0000226-1575043694:256495..256572Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1491911889:257534..257724TCONS_00016096-exon-sc0000226-1491911889:257534..257724Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1510915933:257534..257724TCONS_00016096-exon-sc0000226-1510915933:257534..257724Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1575043694:257534..257724TCONS_00016096-exon-sc0000226-1575043694:257534..257724Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1491911889:258216..258389TCONS_00016096-exon-sc0000226-1491911889:258216..258389Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1510915933:258216..258389TCONS_00016096-exon-sc0000226-1510915933:258216..258389Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1575043694:258216..258389TCONS_00016096-exon-sc0000226-1575043694:258216..258389Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1491911889:258714..258927TCONS_00016096-exon-sc0000226-1491911889:258714..258927Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1510915933:258714..258927TCONS_00016096-exon-sc0000226-1510915933:258714..258927Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1575043694:258714..258927TCONS_00016096-exon-sc0000226-1575043694:258714..258927Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1491911889:259249..259353TCONS_00016096-exon-sc0000226-1491911889:259249..259353Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1510915933:259249..259353TCONS_00016096-exon-sc0000226-1510915933:259249..259353Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1575043694:259249..259353TCONS_00016096-exon-sc0000226-1575043694:259249..259353Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1491911889:259657..260066TCONS_00016096-exon-sc0000226-1491911889:259657..260066Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1510915933:259657..260066TCONS_00016096-exon-sc0000226-1510915933:259657..260066Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1575043694:259657..260066TCONS_00016096-exon-sc0000226-1575043694:259657..260066Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1491911889:262252..263440TCONS_00016096-exon-sc0000226-1491911889:262252..263440Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1510915933:262252..263440TCONS_00016096-exon-sc0000226-1510915933:262252..263440Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1575043694:262252..263440TCONS_00016096-exon-sc0000226-1575043694:262252..263440Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1491911889:264578..264747TCONS_00016096-exon-sc0000226-1491911889:264578..264747Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1510915933:264578..264747TCONS_00016096-exon-sc0000226-1510915933:264578..264747Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1575043694:264578..264747TCONS_00016096-exon-sc0000226-1575043694:264578..264747Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1491911889:265197..265349TCONS_00016096-exon-sc0000226-1491911889:265197..265349Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1510915933:265197..265349TCONS_00016096-exon-sc0000226-1510915933:265197..265349Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1575043694:265197..265349TCONS_00016096-exon-sc0000226-1575043694:265197..265349Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1491911889:265404..266911TCONS_00016096-exon-sc0000226-1491911889:265404..266911Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1510915933:265404..266911TCONS_00016096-exon-sc0000226-1510915933:265404..266911Clytia hemisphaericaexon
TCONS_00016096-exon-sc0000226-1575043694:265404..266911TCONS_00016096-exon-sc0000226-1575043694:265404..266911Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000226supercontigsc0000226:254239..266911 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.333077	0.243628	0.077299	0.0588195	1.21908	0.926469	1.90079	2.36988	1.13823	0.942736	0.872668	1.88221	2.96116	2.24415	2.5202	6.49981	3.02366	3.90708	0.531175	0.0926399	1.59352	1.49403	1.25131	2.2576	3.78467	4.04389	0.570527	0.121872	0.277307	0.282531
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016096 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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