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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016086 ID=TCONS_00016086|Name=TCONS_00016086|organism=Clytia hemisphaerica|type=transcript|length=1096bp
GGGATTTATTTTTGCAGGTGGGTCAGTTGGGCAACGCGGACAGAACATTA
TTGATGGTTGCCTTAACTCCTTCCTTTCATCTAAGGCATTCTTTTGAGAC
ATACAGATGGGAAATAAATTGAATACacaatttgaaatttgccaATAACA
CAAAGTATTGCATCATTCTGTCCTAAAATACATCCATCCACATTTATTTG
AGGAGTCCCTACATTATGAGAATTATGTAAGAATAATGCCCATAGTCTAC
CCTTACACAGTGCAATACTTGTCAAACCATATACCCTTTTAGTCCCCTTA
CAGTGCACACCTTAACCACTCTTCCCAAGTTAGAACAGTTCAGAACAGTT
GACTGTATCTTGTTTATTCAACAATGTCTCATAATAAAGTATGTATACAC
ATGTCACATTTATAGGCTGATGGAATTGAATTTCAAGTTCACTGTAATAT
AGACTTTCCAAATTTGGGTGCGGGCGAGTTGTCATTATTAATTACTTTAC
AGCACACACCAAATTTTATTCAGATTGGGCCTTTAAATGACTCATAAACT
AAAAAATATAGCTATTATAGCTCCATCCTTACAGTGTATATACAAGAGAA
AACTAAATTCAATTACGATAATACTTTAAAGTTTCATCTTTATCGAATCg
tcattttattttatgaaaaatgacGATTATTGtaattgaattttgttttt
tcttgcaaaacgtcaattgacgggTTGAAGGTTGTTGACGTTTTCTTTGA
AAAccagaaatattgatttttcattccatgccAAATGTTTCTTCTCGCTG
CCATGTTTCTTTTTGATCTCATTGtctgttttgaaaaccaaaacaaacag
cccgatgtttatgtcttATCTTTGTTTGACGGTCCGCACAGCCCTCAAAA
TTTTAAGGatggttgttttttttgctgcTATATTATACTACGGAGACAAT
TAATTTACAggaattttgtgaacaagtttagaaatcatctccattatttt
tcaaatataaactatGCAGGCCGTAGCAAAAATCAAGATGGGTGACAAAA
CAGCGATGGAAACagtttttcaccaattttcaggGATTTCAAGTGT Run BLAST on NCBI transcript from alignment at sc0000225:409960..411055 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016086 ID=TCONS_00016086|Name=TCONS_00016086|organism=Clytia hemisphaerica|type=transcript|length=1096bp|location=Sequence derived from alignment at sc0000225:409960..411055 (Clytia hemisphaerica)
ACACTTGAAATCcctgaaaattggtgaaaaactGTTTCCATCGCTGTTTT
GTCACCCATCTTGATTTTTGCTACGGCCTGCatagtttatatttgaaaaa
taatggagatgatttctaaacttgttcacaaaattccTGTAAATTAATTG
TCTCCGTAGTATAATATAgcagcaaaaaaaacaaccatCCTTAAAATTTT
GAGGGCTGTGCGGACCGTCAAACAAAGATaagacataaacatcgggctgt
ttgttttggttttcaaaacagaCAATGAGATCAAAAAGAAACATGGCAGC
GAGAAGAAACATTTggcatggaatgaaaaatcaatatttctggTTTTCAA
AGAAAACGTCAACAACCTTCAAcccgtcaattgacgttttgcaagaaaaa
acaaaattcaattaCAATAATCgtcatttttcataaaataaaatgacGAT
TCGATAAAGATGAAACTTTAAAGTATTATCGTAATTGAATTTAGTTTTCT
CTTGTATATACACTGTAAGGATGGAGCTATAATAGCTATATTTTTTAGTT
TATGAGTCATTTAAAGGCCCAATCTGAATAAAATTTGGTGTGTGCTGTAA
AGTAATTAATAATGACAACTCGCCCGCACCCAAATTTGGAAAGTCTATAT
TACAGTGAACTTGAAATTCAATTCCATCAGCCTATAAATGTGACATGTGT
ATACATACTTTATTATGAGACATTGTTGAATAAACAAGATACAGTCAACT
GTTCTGAACTGTTCTAACTTGGGAAGAGTGGTTAAGGTGTGCACTGTAAG
GGGACTAAAAGGGTATATGGTTTGACAAGTATTGCACTGTGTAAGGGTAG
ACTATGGGCATTATTCTTACATAATTCTCATAATGTAGGGACTCCTCAAA
TAAATGTGGATGGATGTATTTTAGGACAGAATGATGCAATACTTTGTGTT
ATtggcaaatttcaaattgtGTATTCAATTTATTTCCCATCTGTATGTCT
CAAAAGAATGCCTTAGATGAAAGGAAGGAGTTAAGGCAACCATCAATAAT
GTTCTGTCCGCGTTGCCCAACTGACCCACCTGCAAAAATAAATCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016086-exon-sc0000225-1491911889:409960..411055 | TCONS_00016086-exon-sc0000225-1491911889:409960..411055 | Clytia hemisphaerica | exon |
| TCONS_00016086-exon-sc0000225-1510915933:409960..411055 | TCONS_00016086-exon-sc0000225-1510915933:409960..411055 | Clytia hemisphaerica | exon |
| TCONS_00016086-exon-sc0000225-1575043694:409960..411055 | TCONS_00016086-exon-sc0000225-1575043694:409960..411055 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000225 | supercontig | sc0000225:409960..411055 . |
Blast
The following BLAST results are available for this feature:
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