TCONS_00016072 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016072
Unique NameTCONS_00016072
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length150

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016072 ID=TCONS_00016072|Name=TCONS_00016072|organism=Clytia hemisphaerica|type=transcript|length=150bp
AGACAATTTATAAAACTGTTCTACTATACACAATAAATTGAAGTCGAGAT
TAGTATTGTttgatactcaaagtttcacgcAACTTTTCGTTACGATCTCT
TCGGTCAAAAATCTATACTAAAAATGCGTTtcaagtttacaaaaatatac
Run BLAST on NCBI

transcript from alignment at sc0000225:192207..192356

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016072 ID=TCONS_00016072|Name=TCONS_00016072|organism=Clytia hemisphaerica|type=transcript|length=150bp|location=Sequence derived from alignment at sc0000225:192207..192356 (Clytia hemisphaerica)
gtatatttttgtaaacttgaAACGCATTTTTAGTATAGATTTTTGACCGA
AGAGATCGTAACGAAAAGTTgcgtgaaactttgagtatcaaACAATACTA
ATCTCGACTTCAATTTATTGTGTATAGTAGAACAGTTTTATAAATTGTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008982XLOC_008982Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016072-exon-sc0000225-1491911889:192207..192356TCONS_00016072-exon-sc0000225-1491911889:192207..192356Clytia hemisphaericaexon
TCONS_00016072-exon-sc0000225-1510915933:192207..192356TCONS_00016072-exon-sc0000225-1510915933:192207..192356Clytia hemisphaericaexon
TCONS_00016072-exon-sc0000225-1575043694:192207..192356TCONS_00016072-exon-sc0000225-1575043694:192207..192356Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000225supercontigsc0000225:192207..192356 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016072 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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