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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015940 ID=TCONS_00015940|Name=TCONS_00015940|organism=Clytia hemisphaerica|type=transcript|length=583bp
CAAGAACAcggagaacacaagatttggattCGGGAATTCTGCGAAAATGG
GGCTGGCAGGAGGGCTTCACCCTCTTGCATAATAACCCACGAAGAATATA
ATTAGGACTCGACGTGTTAAAgtgaaattaagaatataACACGACATCTA
ATGGAGGAAtgatattgaattttttcttatgagcggaattgaaaatgaag
aagtttgaaagatcaaaattctttttgctCTGCTTTCTTACGCTTTATAT
TCAATACATCGGTGCTAAATTTTATTCAACACATTCGATCAAGCAACCAG
ACACCAATTGTTTGGTAAAATTTTTGGAATCAAAAAGCAACTCACTAAct
gagtgtatctcacgatgtCGAATAAAAGGACGAAGAAATTTGATGGTTGA
CTACAGATGTTATTGTGTACCTCATGATGAAAAAGTTGAGGAGAATTGCA
AGATTGTTGAATCTGAGNGTgagcgttagataaacgttgaaaaacgttgt
gtgccagctgggtagtttaaatttaattaaaaacatgACTGCATGGTAGT
Atcttaatttgttttgttttaaatttgaaaaac Run BLAST on NCBI transcript from alignment at sc0000222:414610..415638- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015940 ID=TCONS_00015940|Name=TCONS_00015940|organism=Clytia hemisphaerica|type=transcript|length=1029bp|location=Sequence derived from alignment at sc0000222:414610..415638- (Clytia hemisphaerica)
CAAGAACACGGAGAACACAAGATTTGGATTCGGGAATTCTGCGAAAATGG
GGCTGGCAGGAGGGCTTCACCCTCTTGCATAATAACCCACGAAGAATATA
ATTAGGACTCGACGTGTTAAAGTTAGTCAATTTTCTGTACTTTTTAATAA
TAAATATTTGCCATAATGAAGCTCGAAACAGCTTAAGCGCTTAAGTAAAC
AGCTGACACACAACGTTGTTTCAACGTTCATCTAACGTTATATGGATGTT
GTGAGCGTTAGATAAACGTTGAAAAACGTTGTGTGCCAGCTGGGTAGTTT
AAATTTAATTAAAAACATGACTGCATGGTAGTATCTTAATTTGTTTTGTT
TTAAATTTGAAAAACACTTCCTTTAAATTGCAATTTTTTCCTAAAGGTAG
CCTACTATTCAAGCCGAACTAGTAAATAAAAAACGACATAGATTCCACGA
TAAGCGTTTATTTCAACAACATGAAAACCTTAAGACATCTCCCGTATAAT
ATTAATAAATTTTAGTTTAGGGTTTTAAGTTAAGGTTTTAATACAATATA
TCGTATATTCAATATAGGTGAAATTAAGAATATAACACGACATCTAATGG
AGGAATGATATTGAATTTTTTCTTATGAGCGGAATTGAAAATGAAGAAGT
TTGAAAGATCAAAATTCTTTTTGCTCTGCTTTCTTACGCTTTATATTCAA
TACATCGGTGCTAAATTTTATTCAACACATTCGATCAAGCAACCAGACAC
CAATTGTTTGGTAAAATTTTTGGAATCAAAAAGCAACTCACTAACTGAGT
GTATCTCACGATGTCGAATAAAAGGACGAAGAAATTTGATGGTTGACTAC
AGATGTTATTGTGTACCTCATGATGAAAAAGTTGAGGAGAATTGCAAGAT
TGTTGAATCTGAGNGTGAGCGTTAGATAAACGTTGAAAAACGTTGTGTGC
CAGCTGGGTAGTTTAAATTTAATTAAAAACATGACTGCATGGTAGTATCT
TAATTTGTTTTGTTTTAAATTTGAAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015940-exon-sc0000222-1575043694:415518..415638 | TCONS_00015940-exon-sc0000222-1575043694:415518..415638 | Clytia hemisphaerica | exon |
| TCONS_00015940-exon-sc0000222-1575043694:414610..415071 | TCONS_00015940-exon-sc0000222-1575043694:414610..415071 | Clytia hemisphaerica | exon |
| TCONS_00015940-exon-sc0000222-1510915933:415518..415638 | TCONS_00015940-exon-sc0000222-1510915933:415518..415638 | Clytia hemisphaerica | exon |
| TCONS_00015940-exon-sc0000222-1510915933:414610..415071 | TCONS_00015940-exon-sc0000222-1510915933:414610..415071 | Clytia hemisphaerica | exon |
| TCONS_00015940-exon-sc0000222-1491911889:415518..415638 | TCONS_00015940-exon-sc0000222-1491911889:415518..415638 | Clytia hemisphaerica | exon |
| TCONS_00015940-exon-sc0000222-1491911889:414610..415071 | TCONS_00015940-exon-sc0000222-1491911889:414610..415071 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000222 | supercontig | sc0000222:414610..415638 - |
Blast
The following BLAST results are available for this feature:
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