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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015875 ID=TCONS_00015875|Name=TCONS_00015875|organism=Clytia hemisphaerica|type=transcript|length=927bp
ttttggaaagccctACCTTTCCCCTTTCTAAATATGTTTAACTGAGTACT
TCAAACAATTTTGGGCAGAAATTATGAAGCCAGACAAAAGGTATATGAAA
AATGTcgcgaaaaagtcattttttggtgcaaaacttcaaaaaattataga
gaactgaaaaattgataaaaacacttacttttttctttagaaggtTTCTT
TATAGTTAAGTAATACAATTCcatacttttgttttgaaaagccaaataaa
actctaaaacactttTATAAACCCTTACTTTCATAGCTAACTTTCTGCCT
CCTCCAGTTTCACAAAATCACGCAACACAGCTCGGTCTaccatttctatt
tttgaaaaatgttgcgtACCAAAATACCAAAACAAACCCCGATTGTTTCT
TATCGGAAATTTCACGCTGATTCCGATTTTTTAATCGGTTTTACCGTACC
TCTGACAGTTGGGGCGTAATCCGACCAAATATAAAGGTCACCTTAAAaac
gtatcagatacgtctttcggaacgtatggcgaacgtatcagatacgtctt
tcggaacgtatggcgaacgtatcagatacgtctttcgggGCGGAAAGGTT
AAAGTTCAAAATTCTGTCAGACTCCGTACggtttagacaaaatttgacgt
caatcgtacTCTATCTAACAGAATTTCAAACCACATGCGgttgcgtcgca
taaaagatgtcacggatccTAAGGATTGGCCCCCCTACTAAATGTTTTTC
TCTTTGGTGTTGGTTgggaaaaagtgaatatagtgactatagtgaatttt
tcatgtACAAAATTCAGATTTTTGCATGATGTAACCAAAAAAGCTATGAa
atattatacattttctgtaaaACTACCttaaggaagaaattttcgcggaa
caaATATTCGCGGAATTTCATTTCGCG Run BLAST on NCBI transcript from alignment at sc0000217:72404..73330 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015875 ID=TCONS_00015875|Name=TCONS_00015875|organism=Clytia hemisphaerica|type=transcript|length=927bp|location=Sequence derived from alignment at sc0000217:72404..73330 (Clytia hemisphaerica)
CGCGAAATGAAATTCCGCGAATATttgttccgcgaaaatttcttccttaa
GGTAGTtttacagaaaatgtataatattTCATAGCTTTTTTGGTTACATC
ATGCAAAAATCTGAATTTTGTacatgaaaaattcactatagtcactatat
tcactttttcccAACCAACACCAAAGAGAAAAACATTTAGTAGGGGGGCC
AATCCTTAggatccgtgacatcttttatgcgacgcaacCGCATGTGGTTT
GAAATTCTGTTAGATAGAgtacgattgacgtcaaattttgtctaaaccGT
ACGGAGTCTGACAGAATTTTGAACTTTAACCTTTCCGCcccgaaagacgt
atctgatacgttcgccatacgttccgaaagacgtatctgatacgttcgcc
atacgttccgaaagacgtatctgatacgttTTTAAGGTGACCTTTATATT
TGGTCGGATTACGCCCCAACTGTCAGAGGTACGGTAAAACCGATTAAAAA
ATCGGAATCAGCGTGAAATTTCCGATAAGAAACAATCGGGGTTTGTTTTG
GTATTTTGGTacgcaacatttttcaaaaatagaaatggtAGACCGAGCTG
TGTTGCGTGATTTTGTGAAACTGGAGGAGGCAGAAAGTTAGCTATGAAAG
TAAGGGTTTATAaaagtgttttagagttttatttggcttttcaaaacaaa
agtatgGAATTGTATTACTTAACTATAAAGAAaccttctaaagaaaaaag
taagtgtttttatcaatttttcagttctctataattttttgaagttttgc
accaaaaaatgactttttcgcgACATTTTTCATATACCTTTTGTCTGGCT
TCATAATTTCTGCCCAAAATTGTTTGAAGTACTCAGTTAAACATATTTAG
AAAGGGGAAAGGTagggctttccaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015875-exon-sc0000217-1491911889:72404..73330 | TCONS_00015875-exon-sc0000217-1491911889:72404..73330 | Clytia hemisphaerica | exon |
| TCONS_00015875-exon-sc0000217-1510915933:72404..73330 | TCONS_00015875-exon-sc0000217-1510915933:72404..73330 | Clytia hemisphaerica | exon |
| TCONS_00015875-exon-sc0000217-1575043694:72404..73330 | TCONS_00015875-exon-sc0000217-1575043694:72404..73330 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000217 | supercontig | sc0000217:72404..73330 . |
Blast
The following BLAST results are available for this feature:
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