|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015795 ID=TCONS_00015795|Name=TCONS_00015795|organism=Clytia hemisphaerica|type=transcript|length=895bp
ATCGAATCTTTCAATCTTCTTCACACTAGACTTTTCAAATGAGTTTTCAT
CATGATTACTACAAAAGATATTTGCGAGGACAACTGGTTTTCGATAAAAT
GTATCCTTTACAGGAACAAAACAAGCATTGACTTCGGGACACGGTAAATA
ACACGATTCAGTTCGATTGACTTCCACTTTAACCAAGACAGGAGCTCGAA
TGCTTGGCTTCTTTAAAACAACAGGTGGTGAGATGTTCTGACTCTCTGTA
CCAAATGTAACAACACATTTTGGACCTGCTAATGAAGTCCGTTTAACTGC
ACTTAAGACAACTTCTGTAATTTCATTGACAACGTTTACGACTACGGGTT
TCACTTCATTAACAACCTCAACGCAAATACGATTCGACGTGGCAGTGATA
TTCTTCAACTTACGTAATTGGCTTGGTGCAGCGTCAATGACATCAAGTGC
ACCACGGATAACGCCCTCACAAACACTAACTTCTTCAGATCCTCTGTCTG
ATAACATTTTGAGTGAAGGACGATACCTAACCAGCAAATCTATATACCTC
TTCAGGATGCGCACCAATCTTTCACGCTCCCACTGATACATTTGAACCTT
GAGATTATTGCTTTTATCTTTGCCATTgtagatatttttgagaaaatttg
tcGACTCAAATATAGATTCAAGAATACCAATGCGTTCTTTGTTGTAGTTT
CTCAAACTCTGAgctgccattttgaatttctatGATCAACTTTCCATGTT
CCAGTTTTGTCACATTACCATTAGCAAATTAAATCTCTGTCATACATAAC
CATGTCGTGTATCGATAGTGTTTTTACTGTTACTGTCGTCCAGTCCTCAG
ATTAGGCAACAGTAAGGGAGTCAAGTGGTTGGGTTTTCATACGCG Run BLAST on NCBI protein sequence of TCONS_00015795-protein >TCONS_00015795-protein ID=TCONS_00015795-protein|Name=TCONS_00015795-protein|organism=Clytia hemisphaerica|type=polypeptide|length=240bp
MAAQSLRNYNKERIGILESIFESTNFLKNIYNGKDKSNNLKVQMYQWERE
RLVRILKRYIDLLVRYRPSLKMLSDRGSEEVSVCEGVIRGALDVIDAAPS
QLRKLKNITATSNRICVEVVNEVKPVVVNVVNEITEVVLSAVKRTSLAGP
KCVVTFGTESQNISPPVVLKKPSIRAPVLVKVEVNRTESCYLPCPEVNAC
FVPVKDTFYRKPVVLANIFCSNHDENSFEKSSVKKIERFD Run BLAST on NCBI transcript from alignment at sc0000216:326115..327009 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015795 ID=TCONS_00015795|Name=TCONS_00015795|organism=Clytia hemisphaerica|type=transcript|length=895bp|location=Sequence derived from alignment at sc0000216:326115..327009 (Clytia hemisphaerica)
CGCGTATGAAAACCCAACCACTTGACTCCCTTACTGTTGCCTAATCTGAG
GACTGGACGACAGTAACAGTAAAAACACTATCGATACACGACATGGTTAT
GTATGACAGAGATTTAATTTGCTAATGGTAATGTGACAAAACTGGAACAT
GGAAAGTTGATCatagaaattcaaaatggcagcTCAGAGTTTGAGAAACT
ACAACAAAGAACGCATTGGTATTCTTGAATCTATATTTGAGTCgacaaat
tttctcaaaaatatctacAATGGCAAAGATAAAAGCAATAATCTCAAGGT
TCAAATGTATCAGTGGGAGCGTGAAAGATTGGTGCGCATCCTGAAGAGGT
ATATAGATTTGCTGGTTAGGTATCGTCCTTCACTCAAAATGTTATCAGAC
AGAGGATCTGAAGAAGTTAGTGTTTGTGAGGGCGTTATCCGTGGTGCACT
TGATGTCATTGACGCTGCACCAAGCCAATTACGTAAGTTGAAGAATATCA
CTGCCACGTCGAATCGTATTTGCGTTGAGGTTGTTAATGAAGTGAAACCC
GTAGTCGTAAACGTTGTCAATGAAATTACAGAAGTTGTCTTAAGTGCAGT
TAAACGGACTTCATTAGCAGGTCCAAAATGTGTTGTTACATTTGGTACAG
AGAGTCAGAACATCTCACCACCTGTTGTTTTAAAGAAGCCAAGCATTCGA
GCTCCTGTCTTGGTTAAAGTGGAAGTCAATCGAACTGAATCGTGTTATTT
ACCGTGTCCCGAAGTCAATGCTTGTTTTGTTCCTGTAAAGGATACATTTT
ATCGAAAACCAGTTGTCCTCGCAAATATCTTTTGTAGTAATCATGATGAA
AACTCATTTGAAAAGTCTAGTGTGAAGAAGATTGAAAGATTCGAT Coding sequence (CDS) from alignment at sc0000216:326115..327009 >TCONS_00015795 ID=TCONS_00015795|Name=TCONS_00015795|organism=Clytia hemisphaerica|type=CDS|length=720bp|location=Sequence derived from alignment at sc0000216:326115..327009 (Clytia hemisphaerica)
atggcagcTCAGAGTTTGAGAAACTACAACAAAGAACGCATTGGTATTCT
TGAATCTATATTTGAGTCgacaaattttctcaaaaatatctacAATGGCA
AAGATAAAAGCAATAATCTCAAGGTTCAAATGTATCAGTGGGAGCGTGAA
AGATTGGTGCGCATCCTGAAGAGGTATATAGATTTGCTGGTTAGGTATCG
TCCTTCACTCAAAATGTTATCAGACAGAGGATCTGAAGAAGTTAGTGTTT
GTGAGGGCGTTATCCGTGGTGCACTTGATGTCATTGACGCTGCACCAAGC
CAATTACGTAAGTTGAAGAATATCACTGCCACGTCGAATCGTATTTGCGT
TGAGGTTGTTAATGAAGTGAAACCCGTAGTCGTAAACGTTGTCAATGAAA
TTACAGAAGTTGTCTTAAGTGCAGTTAAACGGACTTCATTAGCAGGTCCA
AAATGTGTTGTTACATTTGGTACAGAGAGTCAGAACATCTCACCACCTGT
TGTTTTAAAGAAGCCAAGCATTCGAGCTCCTGTCTTGGTTAAAGTGGAAG
TCAATCGAACTGAATCGTGTTATTTACCGTGTCCCGAAGTCAATGCTTGT
TTTGTTCCTGTAAAGGATACATTTTATCGAAAACCAGTTGTCCTCGCAAA
TATCTTTTGTAGTAATCATGATGAAAACTCATTTGAAAAGTCTAGTGTGA
AGAAGATTGAAAGATTCGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015795-exon-sc0000216-1491911889:326115..327009 | TCONS_00015795-exon-sc0000216-1491911889:326115..327009 | Clytia hemisphaerica | exon |
| TCONS_00015795-exon-sc0000216-1510915933:326115..327009 | TCONS_00015795-exon-sc0000216-1510915933:326115..327009 | Clytia hemisphaerica | exon |
| TCONS_00015795-exon-sc0000216-1575043694:326115..327009 | TCONS_00015795-exon-sc0000216-1575043694:326115..327009 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000216 | supercontig | sc0000216:326115..327009 . |
Blast
The following BLAST results are available for this feature:
|
