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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015767 ID=TCONS_00015767|Name=TCONS_00015767|organism=Clytia hemisphaerica|type=transcript|length=2147bp
ACAAAAGTAAGAGGTCCCCTTTTTTCAAATACAGATGAACAGGAGCTTGT
GGAACATAGCACTTTGTGTCCATAAGTGTGCTACTAGATAGCACACAATT
CCTTCCTGACTAATTCCCTTTGCGTAAGCTTAAGCTAGTAGAGTGGAAGG
CTTCAGAGTGTTGTCCAACCCCTTTTGAATAGTATTGGAATAAAGATAGC
TCATCAAACCAAAGGTTAGTGGATTTTCATACATTCATACTGATTTACTG
ATTTCAACCTAAGTTCTGAGCGTAGGTTGGGAACAGTAGCCTTATATATA
TTGAAGCGGGAATGTTACGTAAAAACATTATATATAATAACGTATGTATA
ACCTTTATGAATATcttcttgaaaaatatttcattcacCTTCAAATTCAC
ATAGGAACTGCACTTCTATATGCTTAATCAATCTCTGGTAGTGGTTTgtt
gtaaaaaaatttattcgcGACATTAAAAAATAAAGCGACTTTTGATAAAA
CCGTGAATTATGGCATAATAGAGAAAATGATCTATTTTGTTCACAAgtcc
atgaaaaatgtttcaatcttcttcaaacTTACACAGGAACTGTATTATAT
GATGCTTTGTGAAATTCCATTAGTGGTTTGTTTTAACTCGGTCCCAGTCC
AATGTAAAAAATCAACTTGACGGCCGTCAACAAAGCGAAAAACGACTAAG
TCCAGCAAAacatcattttcagccataactttaccaaaaatgtttcaatc
ttcttcaaacTTACACAGGAACTGTATTATATGATGCTTTGTGAAATTCC
ATTAGTGGTTTGTTTTAACTCGGTCCCAGTCCAATGTAAAAAATCAACTT
GACGGCCGTCAACAAAGCGAAAAACGACTAAGTCCAGCAAAacatcattt
tcagccataactttaccaaaaatgtttcaatcttcttcaaacTTACACAG
GAACTGTATTATATGATGCTTTGTGAAATTCCATTAGTGGTTTGTTTTAA
CTCGGTCCCAGTCCAATGTAAAAAATCAACTTGACGGCCGTCAACAAAGC
GAAAAACGACTAAGTCCAGCAAAacatcattttcagccataactttacca
aaaatgtttcaatcttcttcaaacTTACACAGGAACTGTATTATATGATG
CTTTGTGAAATTCCATTAGTGGTTTGTTTTAACTCGGTCCCAGTCCAATG
TAAAAAATCAACTTGACGGCCGTCAACAAAGCGAAAAACGACTAAGTCCA
GCAAAacatcattttcagccataactttaccaaaaatgtttcaatcttct
tcaaacTTACACAGGAACTGTATTATATGATGCTTTGTGAAATTCCATTA
GTGGTTTGTTTTAACTCGGTCCCAGTCCAATGTAAAAAATCAACGTGACA
GCCATCAACAAAGCGAAAAACGACTAAGTccagaaaatcatctttttcag
ccataacttcattaaaaatgtttcaatcttcttcaaacTTACACAGGAAC
TGTACTATATGATGCTTTGTCCATTCCCAGTGGTGGTTGTTTGTAAAGAT
ATCCTTGTCCAGTTCTAAAAAATCAATGTTTATGCTGAAAAATGACTAAG
TCTGGATTTAGTAGAAAATCACTCATAATTtgatgaaaacttgagcaaat
gaCTTGAAACTTTTAGAGAATGTTTAAAAGAATGTTCCTGAAGTAAAACC
AGGTTTACTTCTGTTTAAATCGCAGTCTTAGAGTCACTTGAATAAGATGT
AAAGTCTGAAATTCTAGCTACAGCTAAAAAGCTGAGAAAATCAACTCCGC
CAcggcagccattttgtttttatttttggaccAATAGATTCACGGGATTT
AAGATATGAAATAAGCCAATAGAAATAGTACATTTGGAACTTTGGAACTA
ATCGGAACTCACGGAGCGATATGATTGGTAGTATTTGGAACTAACTTAAG
GATGACACGCAAATTCGTGAAGCgttccaaatttttttaaatttccatcC
CGACAAATGTCACGTACTAACTATTGGCAAATTCTCTGACATCAAGCATG
CCTATCCATATTGTTTGGATGGAAATCAgcttgaacatgtttttgaagag
aaaGATCTTGGGATTGTGATCGACTCAGAACTTACATTCGAGGAGCA Run BLAST on NCBI transcript from alignment at sc0000216:188026..190172- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015767 ID=TCONS_00015767|Name=TCONS_00015767|organism=Clytia hemisphaerica|type=transcript|length=2147bp|location=Sequence derived from alignment at sc0000216:188026..190172- (Clytia hemisphaerica)
ACAAAAGTAAGAGGTCCCCTTTTTTCAAATACAGATGAACAGGAGCTTGT
GGAACATAGCACTTTGTGTCCATAAGTGTGCTACTAGATAGCACACAATT
CCTTCCTGACTAATTCCCTTTGCGTAAGCTTAAGCTAGTAGAGTGGAAGG
CTTCAGAGTGTTGTCCAACCCCTTTTGAATAGTATTGGAATAAAGATAGC
TCATCAAACCAAAGGTTAGTGGATTTTCATACATTCATACTGATTTACTG
ATTTCAACCTAAGTTCTGAGCGTAGGTTGGGAACAGTAGCCTTATATATA
TTGAAGCGGGAATGTTACGTAAAAACATTATATATAATAACGTATGTATA
ACCTTTATGAATATCTTCTTGAAAAATATTTCATTCACCTTCAAATTCAC
ATAGGAACTGCACTTCTATATGCTTAATCAATCTCTGGTAGTGGTTTGTT
GTAAAAAAATTTATTCGCGACATTAAAAAATAAAGCGACTTTTGATAAAA
CCGTGAATTATGGCATAATAGAGAAAATGATCTATTTTGTTCACAAGTCC
ATGAAAAATGTTTCAATCTTCTTCAAACTTACACAGGAACTGTATTATAT
GATGCTTTGTGAAATTCCATTAGTGGTTTGTTTTAACTCGGTCCCAGTCC
AATGTAAAAAATCAACTTGACGGCCGTCAACAAAGCGAAAAACGACTAAG
TCCAGCAAAACATCATTTTCAGCCATAACTTTACCAAAAATGTTTCAATC
TTCTTCAAACTTACACAGGAACTGTATTATATGATGCTTTGTGAAATTCC
ATTAGTGGTTTGTTTTAACTCGGTCCCAGTCCAATGTAAAAAATCAACTT
GACGGCCGTCAACAAAGCGAAAAACGACTAAGTCCAGCAAAACATCATTT
TCAGCCATAACTTTACCAAAAATGTTTCAATCTTCTTCAAACTTACACAG
GAACTGTATTATATGATGCTTTGTGAAATTCCATTAGTGGTTTGTTTTAA
CTCGGTCCCAGTCCAATGTAAAAAATCAACTTGACGGCCGTCAACAAAGC
GAAAAACGACTAAGTCCAGCAAAACATCATTTTCAGCCATAACTTTACCA
AAAATGTTTCAATCTTCTTCAAACTTACACAGGAACTGTATTATATGATG
CTTTGTGAAATTCCATTAGTGGTTTGTTTTAACTCGGTCCCAGTCCAATG
TAAAAAATCAACTTGACGGCCGTCAACAAAGCGAAAAACGACTAAGTCCA
GCAAAACATCATTTTCAGCCATAACTTTACCAAAAATGTTTCAATCTTCT
TCAAACTTACACAGGAACTGTATTATATGATGCTTTGTGAAATTCCATTA
GTGGTTTGTTTTAACTCGGTCCCAGTCCAATGTAAAAAATCAACGTGACA
GCCATCAACAAAGCGAAAAACGACTAAGTCCAGAAAATCATCTTTTTCAG
CCATAACTTCATTAAAAATGTTTCAATCTTCTTCAAACTTACACAGGAAC
TGTACTATATGATGCTTTGTCCATTCCCAGTGGTGGTTGTTTGTAAAGAT
ATCCTTGTCCAGTTCTAAAAAATCAATGTTTATGCTGAAAAATGACTAAG
TCTGGATTTAGTAGAAAATCACTCATAATTTGATGAAAACTTGAGCAAAT
GACTTGAAACTTTTAGAGAATGTTTAAAAGAATGTTCCTGAAGTAAAACC
AGGTTTACTTCTGTTTAAATCGCAGTCTTAGAGTCACTTGAATAAGATGT
AAAGTCTGAAATTCTAGCTACAGCTAAAAAGCTGAGAAAATCAACTCCGC
CACGGCAGCCATTTTGTTTTTATTTTTGGACCAATAGATTCACGGGATTT
AAGATATGAAATAAGCCAATAGAAATAGTACATTTGGAACTTTGGAACTA
ATCGGAACTCACGGAGCGATATGATTGGTAGTATTTGGAACTAACTTAAG
GATGACACGCAAATTCGTGAAGCGTTCCAAATTTTTTTAAATTTCCATCC
CGACAAATGTCACGTACTAACTATTGGCAAATTCTCTGACATCAAGCATG
CCTATCCATATTGTTTGGATGGAAATCAGCTTGAACATGTTTTTGAAGAG
AAAGATCTTGGGATTGTGATCGACTCAGAACTTACATTCGAGGAGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015767-exon-sc0000216-1575043694:188026..190172 | TCONS_00015767-exon-sc0000216-1575043694:188026..190172 | Clytia hemisphaerica | exon |
| TCONS_00015767-exon-sc0000216-1510915933:188026..190172 | TCONS_00015767-exon-sc0000216-1510915933:188026..190172 | Clytia hemisphaerica | exon |
| TCONS_00015767-exon-sc0000216-1491911889:188026..190172 | TCONS_00015767-exon-sc0000216-1491911889:188026..190172 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000216 | supercontig | sc0000216:188026..190172 - |
Blast
The following BLAST results are available for this feature:
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