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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015753 ID=TCONS_00015753|Name=TCONS_00015753|organism=Clytia hemisphaerica|type=transcript|length=675bp
tgatcGCAAGCAAAGAAAACagcatgaaattttaaaaaatggaaGCATGG
CCactaaagaaaaagtaaagccaGGACTTCACATCTCATCAAGATTCCAG
CCTCCGTAAACCAGTACTCGCATCAATATCAACGTAACGAGAAGGAGCTT
ACTTTCTATCAGACCATTACAGCGTAGTCATATAGGATGCTTAATTATTG
ACTGGATGGCATAGCCCTTGGTAatgaaaatcatcatcatcatcatcatc
atcatccttcgatctAGGTCCCAAGGAAACTACCCAGGTACAACAATTGA
AATCATAAGCAAATGTTTTTATCTTTGCTAACGTGTATCCTTACTATGTC
TCTTTTAAAGGTTAAAAGCTTCTCTCTATTTTTCAGAAGATTACTAAACA
GGTCTAGTGTTTTCGTATCAGTGTACAGAATTATTGAACCATCAGTGGTA
GTTTGTACTGACCCTAAAGAATATTTTGTTTCTGGTCCAGCTTGAAATTG
TCTTCACCCGGGCtgcattctttattttttgaactttccaaatttttcca
actttcccattttaacattttctacACACACACTTAAGTGATCTAAAACA
ATCTTTCCACATTTTTTATTCCGTACTCCTTCAATCCCAATTTCAcggat
ttttcttttcaaattttaatcgaaa Run BLAST on NCBI transcript from alignment at sc0000216:329854..330773+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015753 ID=TCONS_00015753|Name=TCONS_00015753|organism=Clytia hemisphaerica|type=transcript|length=920bp|location=Sequence derived from alignment at sc0000216:329854..330773+ (Clytia hemisphaerica)
tgatcGCAAGCAAAGAAAACagcatgaaattttaaaaaatggaaGCATGG
CCactaaagaaaaagtaaagccaGGACTTCACATCTCATCAAGGTCTCAG
ATAGTTTCATATAAACTAAATGAAGTTCATGATGTCCAAAATCTGATTGa
taaaatgattttattgaagTTTATCAGCTGTTTTGTTCTCTATTTTAATC
AGTTTGAATAAATAAACAACATACCCTCCCACCACACAATTTTCATCTTC
CCACCAGGTTTCCATTATTATTACTAAGCAAATTTTTGAATTCATTCAAG
TGTTTCAAGATATAAGTATTCATTTGCATTAACTTTAGATTCCAGCCTCC
GTAAACCAGTACTCGCATCAATATCAACGTAACGAGAAGGAGCTTACTTT
CTATCAGACCATTACAGCGTAGTCATATAGGATGCTTAATTATTGACTGG
ATGGCATAGCCCTTGGTAatgaaaatcatcatcatcatcatcatcatcat
ccttcgatctAGGTCCCAAGGAAACTACCCAGGTACAACAATTGAAATCA
TAAGCAAATGTTTTTATCTTTGCTAACGTGTATCCTTACTATGTCTCTTT
TAAAGGTTAAAAGCTTCTCTCTATTTTTCAGAAGATTACTAAACAGGTCT
AGTGTTTTCGTATCAGTGTACAGAATTATTGAACCATCAGTGGTAGTTTG
TACTGACCCTAAAGAATATTTTGTTTCTGGTCCAGCTTGAAATTGTCTTC
ACCCGGGCtgcattctttattttttgaactttccaaatttttccaacttt
cccattttaacattttctacACACACACTTAAGTGATCTAAAACAATCTT
TCCACATTTTTTATTCCGTACTCCTTCAATCCCAATTTCAcggatttttc
ttttcaaattttaatcgaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015753-exon-sc0000216-1491911889:329854..329946 | TCONS_00015753-exon-sc0000216-1491911889:329854..329946 | Clytia hemisphaerica | exon |
| TCONS_00015753-exon-sc0000216-1510915933:329854..329946 | TCONS_00015753-exon-sc0000216-1510915933:329854..329946 | Clytia hemisphaerica | exon |
| TCONS_00015753-exon-sc0000216-1575043694:329854..329946 | TCONS_00015753-exon-sc0000216-1575043694:329854..329946 | Clytia hemisphaerica | exon |
| TCONS_00015753-exon-sc0000216-1491911889:330192..330773 | TCONS_00015753-exon-sc0000216-1491911889:330192..330773 | Clytia hemisphaerica | exon |
| TCONS_00015753-exon-sc0000216-1510915933:330192..330773 | TCONS_00015753-exon-sc0000216-1510915933:330192..330773 | Clytia hemisphaerica | exon |
| TCONS_00015753-exon-sc0000216-1575043694:330192..330773 | TCONS_00015753-exon-sc0000216-1575043694:330192..330773 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000216 | supercontig | sc0000216:329854..330773 + |
Blast
The following BLAST results are available for this feature:
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