TCONS_00015725 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015725
Unique NameTCONS_00015725
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length487

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015725 ID=TCONS_00015725|Name=TCONS_00015725|organism=Clytia hemisphaerica|type=transcript|length=487bp
GCAATATACAAGAGTTTTTTccatgcaagttacctgacggtaagtacttt
taaaatgcttaaaaaatacattgacatttggttgtgattatgggatggtg
aaagtttgtttgataaatttggttgaagtatcaaaacaaacttgttgtta
AAGAGATTTAAACAGTATGTAAAAATACAGCCCAGAAATCAACCATCCCA
AGATTTGACCGATCGTCCCGCCCAACCAAgttttagagcagttgacggct
TGACGGCATGTTTTACTACAAATCAAAGCCTACAAAGCACACAGTATTTC
CCAAGCTGTTTGATGTCAACAAAAGTTGCATGTCTGCATGTGGATAGGAG
AGACCTTCCATCATCCCATTCAAACTTTCGAATAGTATCCCTAAATGTTT
GAATACCTTTCTCCTGTGTCCTGCCTTTcgctttaaaaataaaagaagtc
GACTTGTTGACGCTCTGCCTCTCAGGACAGCTCAGGA
Run BLAST on NCBI

transcript from alignment at sc0000215:170337..170823

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015725 ID=TCONS_00015725|Name=TCONS_00015725|organism=Clytia hemisphaerica|type=transcript|length=487bp|location=Sequence derived from alignment at sc0000215:170337..170823 (Clytia hemisphaerica)
TCCTGAGCTGTCCTGAGAGGCAGAGCGTCAACAAGTCgacttcttttatt
tttaaagcgAAAGGCAGGACACAGGAGAAAGGTATTCAAACATTTAGGGA
TACTATTCGAAAGTTTGAATGGGATGATGGAAGGTCTCTCCTATCCACAT
GCAGACATGCAACTTTTGTTGACATCAAACAGCTTGGGAAATACTGTGTG
CTTTGTAGGCTTTGATTTGTAGTAAAACATGCCGTCAagccgtcaactgc
tctaaaacTTGGTTGGGCGGGACGATCGGTCAAATCTTGGGATGGTTGAT
TTCTGGGCTGTATTTTTACATACTGTTTAAATCTCTTtaacaacaagttt
gttttgatacttcaaccaaatttatcaaacaaactttcaccatcccataa
tcacaaccaaatgtcaatgtattttttaagcattttaaaagtacttaccg
tcaggtaacttgcatggAAAAAACTCTTGTATATTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008779XLOC_008779Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015725-exon-sc0000215-1491911889:170337..170823TCONS_00015725-exon-sc0000215-1491911889:170337..170823Clytia hemisphaericaexon
TCONS_00015725-exon-sc0000215-1510915933:170337..170823TCONS_00015725-exon-sc0000215-1510915933:170337..170823Clytia hemisphaericaexon
TCONS_00015725-exon-sc0000215-1575043694:170337..170823TCONS_00015725-exon-sc0000215-1575043694:170337..170823Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000215supercontigsc0000215:170337..170823 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.282732	0.1721	0.135996	0	0.153603	0.215082	0	0	0	0.254624	0	0.144931	0.155533	0.479011	0.0981942	0	0.283918	0.123388	0.361106	0	0	0	0.122285	0	0	0	0.144315
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015725 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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