TCONS_00015723 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015723
Unique NameTCONS_00015723
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length329

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015723 ID=TCONS_00015723|Name=TCONS_00015723|organism=Clytia hemisphaerica|type=transcript|length=329bp
CAGATATCAGGGAAAACTGAATATAATCTAAGAACAGCAATTTAATATCT
GTGACCTTAGCAGATCAGATGACGTTTTGGCCCATGACCTTTTCTTCACA
AAGTTAGTTTAATTTTAAATAAGTTGTTGTGTTTTTCTTCCattcaaaaa
cacaattttcaataaatgcaATTATTCCTGTAGGCGTTCACGAAGGTGAT
TATTGCTAATTAACAGATTTCTATTTGTAATTATATCTCTCCTGTTTTTG
CATGTTAAATAATTGTATCGAGCCAATCATCGAGCTCTTGTGCATTCTCC
TCCTGTAGAAAGTAGAAAAATGTAAGATT
Run BLAST on NCBI

transcript from alignment at sc0000215:143013..143341

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015723 ID=TCONS_00015723|Name=TCONS_00015723|organism=Clytia hemisphaerica|type=transcript|length=329bp|location=Sequence derived from alignment at sc0000215:143013..143341 (Clytia hemisphaerica)
AATCTTACATTTTTCTACTTTCTACAGGAGGAGAATGCACAAGAGCTCGA
TGATTGGCTCGATACAATTATTTAACATGCAAAAACAGGAGAGATATAAT
TACAAATAGAAATCTGTTAATTAGCAATAATCACCTTCGTGAACGCCTAC
AGGAATAATtgcatttattgaaaattgtgtttttgaatGGAAGAAAAACA
CAACAACTTATTTAAAATTAAACTAACTTTGTGAAGAAAAGGTCATGGGC
CAAAACGTCATCTGATCTGCTAAGGTCACAGATATTAAATTGCTGTTCTT
AGATTATATTCAGTTTTCCCTGATATCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008777XLOC_008777Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015723-exon-sc0000215-1491911889:143013..143341TCONS_00015723-exon-sc0000215-1491911889:143013..143341Clytia hemisphaericaexon
TCONS_00015723-exon-sc0000215-1510915933:143013..143341TCONS_00015723-exon-sc0000215-1510915933:143013..143341Clytia hemisphaericaexon
TCONS_00015723-exon-sc0000215-1575043694:143013..143341TCONS_00015723-exon-sc0000215-1575043694:143013..143341Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000215supercontigsc0000215:143013..143341 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.46039	6.63074	6.69471	3.60235	1.19605	0.315045	0.760177	0.711668	0.996511	0.925755	1.4976	1.57514	1.17971	1.22515	1.00724	2.52214	3.55094	3.86707	0.314269	0	1.42919	2.92787	2.03383	4.93079	0.317413	0	0.405377	0.865259	1.31254	1.67158
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015723 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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