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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015651 ID=TCONS_00015651|Name=TCONS_00015651|organism=Clytia hemisphaerica|type=transcript|length=1553bp aagaaaagaaaaaggaattAATGGACAAAAGTTGATGACtggagaaaaac aacaaaagaaaagatACAACAAGAAAGGGGGAAACCACCATGTGAATACA AATGAAGTTATTGAGGAAGGAACCGGCTGACGCACGACAAAGAACGAAAA CTACATATAAATAAGCGAATAGAACAACACAAAAAAACACACTATTAAAA TCAGCTGATTATCAAAGAAAGAGCTGGGTTGAAGAATATATTGGATTTTG CAGACAGTAAAACTTGTGGTACAAACATGTGGTTTTGGTTTGGTTTATTA TTGACATTCTACTGCAAGACTCATGGTCTCTCGATCACTGAAGACATAGC AGAACAGattgaagttgaaaatgaagACAGCTCATTGATCCATTTCGAAA GTGGTCAACAGAATAATGACCAAGGAAAATCATCAAAGAACTTAGATAAC CTTTTACAGAAACCAACGCAAATTTGGAATGTTCCTAACGAGCTATCTAT ACACCCATCATCATGCGAGCAATATACATACTGTGAGAGAGAAGACCGAC CAGCAGAGGGAGTTTACAGACGTTTACCCATCTACCCTTGGTGGTATTAT TCATGTGAGGGTAACAAAGTCAAATGTCAACCATGCCCCTCCACTGAAGA TCTCGATCATCCAACTTTATTCTTCTCAGAAAGATGCCAGAAATgtattt cagaatttaaagACGAGAAGATCGCATGCCCACCAAAAACTAAAGAAGAT GAGAAAACAAGCAACTGGacgaaattgaaattgatgttTTGGTAAATTAG TGGAATAATGATATTAACATCACGAAAAAAACGAAAAcagattttacatt ttacaattttattaccAAGAATCTTTTNATGAGAAAACAAGCAACTGGac gaaattgaaattgatgttTTGGTAAATTAGTGGAATAATGATATTAACAT CACGAAAAAAACGAAAAcagattttacattttacaattttattaccaaca atcttttatatttttatttattcttcaaaagattttattaatttattcta atttttttaatagcgaacaaggaaaaaatcattttagggTACCTGGTATT TTCTGGTATTTCCaagagagaaatttcaaatacaCACAAAACCAACGTTG AATTCTCAAATTGTTTGGACTTAATTCTACTAAGTtattgttttagaaaa tttaattctgtttaaaagaaaatatttttgttttatcaatttttatatAT ACAGATATTgtaaataataacaaaaacagtttttatcttcattcaaaata tattattttcaagCTTAATCCAAGAAGAAAAATAGACCCCCCCCTAAGAA GGATAGCCGATGGTCAAAGGCCAAAATACTTTTGAAGGATTTCATAAGTT TAGGAGAGAGAAGGAGCATAATGTCTTGGTGACCAGGTGATATTGTAAAA TCCAAATCTAAATTTCTACAGAGAGCTCAAGGAGGATTTTCAATGAATTC AAACGAACAAATCTTTGAGATTAGTCAAAAACAATATCTCATGTCACAAA AAT Run BLAST on NCBI protein sequence of TCONS_00015651-protein >TCONS_00015651-protein ID=TCONS_00015651-protein|Name=TCONS_00015651-protein|organism=Clytia hemisphaerica|type=polypeptide|length=172bp
MWFWFGLLLTFYCKTHGLSITEDIAEQIEVENEDSSLIHFESGQQNNDQG KSSKNLDNLLQKPTQIWNVPNELSIHPSSCEQYTYCEREDRPAEGVYRRL PIYPWWYYSCEGNKVKCQPCPSTEDLDHPTLFFSERCQKCISEFKDEKIA CPPKTKEDEKTSNWTKLKLMFW Run BLAST on NCBI transcript from alignment at sc0000215:85892..91137+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015651 ID=TCONS_00015651|Name=TCONS_00015651|organism=Clytia hemisphaerica|type=transcript|length=5246bp|location=Sequence derived from alignment at sc0000215:85892..91137+ (Clytia hemisphaerica) aagaaaagaaaaaggaattAATGGACAAAAGTTGATGACtggagaaaaac
aacaaaagaaaagatACAACAAGAAAGGGGGAAACCACCATGTGAATACA
AATGAAGTTATTGAGGAAGGAACCGGCTGACGCACGACAAAGAACGAAAA
CTACATATAAATAAGCGAATAGAACAACACAAGTGGGAATTGCTTTTAGA
TACATTTTATATTGACTTGTTGATTGACTGTCTATGAGACCGAATGTCAA
CAAATTAAAAGCTTTTTGGGTACCTACAATGATTTTGTGGTTTAATGCAt
tggttttcatttttctcaaacTCAAGAGATGTTATACACTTGGTTGTTTG
TGATTTTAAAGAAATAACATTTGTATGAACATTATTATCTTACCAAGCTG
TCGGTTGGTTTAAAAGTAGAAGAGGTCAATAACATTTTTGTTTCTGctca
aaaattatttgaaaaaacaGAATCTGTGTTTGCGATTGAAGAATATCATC
TCTCTAAATCTCTTGTGTTGATTGTATCTAGAAAAACACACTATTAAAAT
CAGCTGATTATCAAAGAAAGAGCTGGGTTGAAGAATATATTGGATTTTGC
AGACAGTAAAACTTGTGGTACAAACATGTGGTTTTGGTTTGGTTTATTAT
TGACATTCTACTGCAAGACTCATGGTAAGAAACTTGCAAAAATATAACAG
AACGATATATATATTCTGGCAAATTGGATATTTAGCTCAGCAGACAAGTA
TATTTATTTATCAAGAGTTATAACTGATCCAAATATAAATTTCCTTAGTT
GAGATATGGCATATACGTTGATGATATTATATCGGCTTCCCTAGATCTAT
TTATGAAATCTGGCTTTTAGATTTTCAAGGAAATGGTGATATAATTTTCA
TAGAAAACCAGCAAGACAGAGGATTCTGAGAATAAAGTTTAGGAAAAAGA
AATCAATCGATTTTCGTCGTCTTTGTTAGTGAGATAGAGAGGGGTATCAG
GTGTCTTTTTAAGAGAACTTTCTTTTACTTCAATGTTCGAAAGGCCAAGT
ACAGTAGATCGGTACATTGCAAAAAGAATTAGAAATGACTCTATAAGAAT
GTACAAAATAAATCTGtgattattttcggaaaacaacTTATTGTGATTTT
AGAAGAGAATAGAATAAGACTATTCTTCTGAGTCTATGAAAGAAGAAGCT
AATACCACGAGGGAATAACAACAAATAGTCGAGAAAATCTTTTcgacttt
atttttttttgtacaatgaGTGTGATGGACAAAGAAAAGAGGAACCTTAG
GATAAAGACTGCCCAATTATTACAGATTACAGCTAAAGAACTCTCTTAAT
TGATATCAAGAAAACAACTTCTTGGAGATTGACGTTCCATGAACTTACTT
ACAACTTGAAGTTTATAAAACTACATGTGTTGCGATACGTTTTTGATTTC
GAGAGCCAAAATCGTCATCCGTTCATTACGTCAGCGAAAATAAAACACTT
GAAGAAGCAAGATTTTCGACCATTTAACAACTTAATTGAATTGAGTTGAA
AGAGTTGTTTTGATATTAAGTTATGGAGTCTCTTGTAGTTatgatgtttt
tgatttttcttcctttGATAAATGGTAAGCTGTGGAGAGTTTTTCATTTC
TGTTGGGGGTAATTGCAAAGAAAAACAACATCGTAGCTTCTTCTATGATC
GCTGTCTTTGAGAATCATTGTCTTTGAGAAGATTTtaaccttcttttttt
aatcatgGTCATTTTCTTAAACCTCAAACTCATCATGGGTCTCGAACAAT
CCAATTAGCATTGAGATTAGTAAGGTAAAGAAAGAAGGGCTTCAACTAAT
GAATAGTCTGATTAATAGCCTTAAAAGTTTTGCAGCAGTGTCGTCCTTAA
GCAGTATTTTTAAAAAAGCTATTagtcaggaagaaaagacactttttctT
TCTGACTGACATCGCTCTACTTATGTATCGAGCACTGTATacgcccccca
gcggtttgcgtgaatgcgtgaatgcgtgaatgggcattttcggttgcgtg
aatgcgtgaattgaaaaaacttgcgtgaatgtgaaaatccactttttaac
tgcgtgaatgcgtgaatctgggctattttttgcgtgaatacgtgaatttt
cccttttttccactgATTGTGTGCAgtgttcccgattttccaatgtttct
ccgatttttcccgaaaattttccgattttctgaaaaattgggttattgcg
tgaaactcgaggaaaatttgcgtgattgcgtggtttgagggtccgctggg
gggggggtggtGATGCTCGTATACTGAAGAAATACTTAAAGAAGCTATTA
GAAGTTCTGACCGAATCTATGACCCACTACGAGCTAAACATCATCTAAAG
AATGATATTAAAATCATACGCCATAACAAAAAACAATCGTTCAAATCTTC
CTTTGCAGGTCTCTCGATCACTGAAGACATAGCAGAACAGattgaagttg
aaaatgaagACAGCTCATTGATCCATTTCGAAAGTGGTCAACAGAATAAT
GACCAAGGAAAATCATCAAAGAACTTAGATAACCTTTTACAGAAACCAAC
GCAAATTTGGAATGTTCCTAACGAGCTATCTATACACCCATCATCATGTA
AGGACATTCCTTTGTCAATCAAATACTGTTTGACGCTTGTTTCACACCTT
TTATTTATTAAAACTAAAAGCCATAAATGATTAACTCAGTGAAAGATACG
AACATGATTCAATCGTTGTGAGAGGAGCTTAAAGTATTCTTGATTTTCAC
CATCGTATCAAATCTTCTTTGACTTATTCAATCGTAAACACTTCATATTA
AGTCTGATAACCATAAATGGTTAATTTAGTTTACAACTGATTTGAGGGGG
ATTCGATGACAGCTTCATTGTGAgacgaatacacgtttttttttatataa
gaacatcaaaaattttcgaagccttcggatgttcttagttttttggattt
gaagcctaaaaatgttcttaaaatgttcttattttcagcattttttgaga
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
caaagccttagtatgttcttagaatgttcttaaatttttgggcctcgaag
ccttatgttcttatatagtttgttcttataaaaaaaaaacgtgtaagtcg
GGAATTTATAATATCGACAATTTTGACCAACTTTATCAAAACTTTCATTT
CCAGGCGAGCAATATACATACTGTGAGAGAGAAGACCGACCAGCAGAGGG
AGTTTACAGACGTTTACCCATCTACCCTTGGTGGTATTATTCATGTGAGG
GTAACAAAGTCAAATGTCAACCATGCCCCTCCACTGAAGATCTCGATCAT
CCAACTTTATTCTTCTCAGAAAGATGCCAGAAATgtatttcagaatttaa
aggtaaGTGAGACGGAGAAAGGAATGAGCTTATGTCTTGGGATGCTAAAA
TCCTCATTAGGCTTGTCTAGAACAAGCTTGGGGTAGACTAAAACACATTT
TTCATCATGCTAAGTTTACTGGCAATACAAGAAAACATTGCATTCGTCTT
TTGCACTACTGTTTTTTACACACTTTTGGTTTTTGCTTATAACGAGACAT
ATCTGACGGTGAGGGAGACATTTTGTTTCCTTCGATACAGTACATACATC
TAAAGTACGCAAAAGGTTTTTCACGTATAGATGCCAACGACGAAAACACC
GTCTCTCTCGGGTGCTCTTTGAAGACACCCGTCACAAAAAGACAAGTGAG
CGACTGCTTAATTAAATCTAATCAATATTCATTTTCGTATTCTTTCTACA
TTTAGACGAGAAGATCGCATGCCCACCAAAAACTAAAGAAGGTAATTAAA
TTTCTCTCTATTTTTGTAGTTTTCGATCGCTTGCCCATTCATGTTATTAA
TATACCGTTGATTGAAATGGGCTAATTTCGTTTGATTCGAAGAGCGCATC
TCGCTTTTAAAAAGAAGTCGTTAGGAGGAACTTATGCGTTAAGTTCATTA
CCGGAGTAATTAGTCATTAAGAATCTAATTATCCAGGAAAGAATGGAGGA
TATTATAAATTATAAGAGAATGTCTATCGAGAATTAAAGACTCGGTTAAA
TATCTGCTTTAGGGACGTCCCGTCCATCCGGTTATATAGCCTATAAGAAC
ACATTATCACTTTGAAAGCACCTATAAATTCACATAACGAGTTTAAAAAT
TACATAAaccaaaattgttaatttttttttttgcaccatAGATGAGAAAA
CAAGCAACTGGacgaaattgaaattgatgttTTGGTAAATTAGTGGAATA
ATGATATTAACATCACGAAAAAAACGAAAAcagattttacattttacaat
tttattaccAAGAATCTTTTNATGAGAAAACAAGCAACTGGacgaaattg
aaattgatgttTTGGTAAATTAGTGGAATAATGATATTAACATCACGAAA
AAAACGAAAAcagattttacattttacaattttattaccaacaatctttt
atatttttatttattcttcaaaagattttattaatttattctaatttttt
taatagcgaacaaggaaaaaatcattttagggTACCTGGTATTTTCTGGT
ATTTCCaagagagaaatttcaaatacaCACAAAACCAACGTTGAATTCTC
AAATTGTTTGGACTTAATTCTACTAAGTtattgttttagaaaatttaatt
ctgtttaaaagaaaatatttttgttttatcaatttttatatATACAGATA
TTgtaaataataacaaaaacagtttttatcttcattcaaaatatattatt
ttcaagCTTAATCCAAGAAGAAAAATAGACCCCCCCCTAAGAAGGATAGC
CGATGGTCAAAGGCCAAAATACTTTTGAAGGATTTCATAAGTTTAGGAGA
GAGAAGGAGCATAATGTCTTGGTGACCAGGTGATATTGTAAAATCCAAAT
CTAAATTTCTACAGAGAGCTCAAGGAGGATTTTCAATGAATTCAAACGAA
CAAATCTTTGAGATTAGTCAAAAACAATATCTCATGTCACAAAAAT Coding sequence (CDS) from alignment at sc0000215:85892..91137+ >TCONS_00015651 ID=TCONS_00015651|Name=TCONS_00015651|organism=Clytia hemisphaerica|type=CDS|length=2595bp|location=Sequence derived from alignment at sc0000215:85892..91137+ (Clytia hemisphaerica) ATGTGGTTTTGGTTTGGTTTATTATTGACATTCTACTGCAAGACTCATGG TCTCTCGATCACTGAAGACATAGCAGAACAGattgaagttgaaaatgaag ACAGCTCATTGATCCATTTCGAAAGTGGTCAACAGAATAATGACCAAGGA AAATCATCAAAGAACTTAGATAACCTTTTACAGAAACCAACGCAAATTTG GAATGTTCCTAACGAGCTATCTATACACCCATCATCATGCGAGCAATATA CATACTGTGAGAGAGAAGACCGACCAGCAGAGGGAGTTTACAGACGTTTA CCCATCTACCCTTGGTGGTATTATTCATGTGAGGGTAACAAAGTCAAATG TCAACCATGCCCCTCCACTGAAGATCTCGATCATCCAACTTTATTCTTCT CAGAAAGATGCCAGAAATgtatttcagaatttaaagACGAGAAGATCGCA TGCCCACCAAAAACTAAAGAAGATGAGAAAACAAGCAACTGGacgaaatt gaaattgatgttTTGGTAAATGTGGTTTTGGTTTGGTTTATTATTGACAT TCTACTGCAAGACTCATGGTCTCTCGATCACTGAAGACATAGCAGAACAG attgaagttgaaaatgaagACAGCTCATTGATCCATTTCGAAAGTGGTCA ACAGAATAATGACCAAGGAAAATCATCAAAGAACTTAGATAACCTTTTAC AGAAACCAACGCAAATTTGGAATGTTCCTAACGAGCTATCTATACACCCA TCATCATGCGAGCAATATACATACTGTGAGAGAGAAGACCGACCAGCAGA GGGAGTTTACAGACGTTTACCCATCTACCCTTGGTGGTATTATTCATGTG AGGGTAACAAAGTCAAATGTCAACCATGCCCCTCCACTGAAGATCTCGAT CATCCAACTTTATTCTTCTCAGAAAGATGCCAGAAATgtatttcagaatt taaagACGAGAAGATCGCATGCCCACCAAAAACTAAAGAAGATGAGAAAA CAAGCAACTGGacgaaattgaaattgatgttTTGGTAAATGTGGTTTTGG TTTGGTTTATTATTGACATTCTACTGCAAGACTCATGGTCTCTCGATCAC TGAAGACATAGCAGAACAGattgaagttgaaaatgaagACAGCTCATTGA TCCATTTCGAAAGTGGTCAACAGAATAATGACCAAGGAAAATCATCAAAG AACTTAGATAACCTTTTACAGAAACCAACGCAAATTTGGAATGTTCCTAA CGAGCTATCTATACACCCATCATCATGCGAGCAATATACATACTGTGAGA GAGAAGACCGACCAGCAGAGGGAGTTTACAGACGTTTACCCATCTACCCT TGGTGGTATTATTCATGTGAGGGTAACAAAGTCAAATGTCAACCATGCCC CTCCACTGAAGATCTCGATCATCCAACTTTATTCTTCTCAGAAAGATGCC AGAAATgtatttcagaatttaaagACGAGAAGATCGCATGCCCACCAAAA ACTAAAGAAGATGAGAAAACAAGCAACTGGacgaaattgaaattgatgtt TTGGTAAATGTGGTTTTGGTTTGGTTTATTATTGACATTCTACTGCAAGA CTCATGGTCTCTCGATCACTGAAGACATAGCAGAACAGattgaagttgaa aatgaagACAGCTCATTGATCCATTTCGAAAGTGGTCAACAGAATAATGA CCAAGGAAAATCATCAAAGAACTTAGATAACCTTTTACAGAAACCAACGC AAATTTGGAATGTTCCTAACGAGCTATCTATACACCCATCATCATGCGAG CAATATACATACTGTGAGAGAGAAGACCGACCAGCAGAGGGAGTTTACAG ACGTTTACCCATCTACCCTTGGTGGTATTATTCATGTGAGGGTAACAAAG TCAAATGTCAACCATGCCCCTCCACTGAAGATCTCGATCATCCAACTTTA TTCTTCTCAGAAAGATGCCAGAAATgtatttcagaatttaaagACGAGAA GATCGCATGCCCACCAAAAACTAAAGAAGATGAGAAAACAAGCAACTGGa cgaaattgaaattgatgttTTGGTAAATGTGGTTTTGGTTTGGTTTATTA TTGACATTCTACTGCAAGACTCATGGTCTCTCGATCACTGAAGACATAGC AGAACAGattgaagttgaaaatgaagACAGCTCATTGATCCATTTCGAAA GTGGTCAACAGAATAATGACCAAGGAAAATCATCAAAGAACTTAGATAAC CTTTTACAGAAACCAACGCAAATTTGGAATGTTCCTAACGAGCTATCTAT ACACCCATCATCATGCGAGCAATATACATACTGTGAGAGAGAAGACCGAC CAGCAGAGGGAGTTTACAGACGTTTACCCATCTACCCTTGGTGGTATTAT TCATGTGAGGGTAACAAAGTCAAATGTCAACCATGCCCCTCCACTGAAGA TCTCGATCATCCAACTTTATTCTTCTCAGAAAGATGCCAGAAATgtattt cagaatttaaagACGAGAAGATCGCATGCCCACCAAAAACTAAAGAAGAT GAGAAAACAAGCAACTGGacgaaattgaaattgatgttTTGGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00015651-exon-sc0000215-1491911889:85892..86073 | TCONS_00015651-exon-sc0000215-1491911889:85892..86073 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1510915933:85892..86073 | TCONS_00015651-exon-sc0000215-1510915933:85892..86073 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1575043694:85892..86073 | TCONS_00015651-exon-sc0000215-1575043694:85892..86073 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1491911889:86423..86565 | TCONS_00015651-exon-sc0000215-1491911889:86423..86565 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1510915933:86423..86565 | TCONS_00015651-exon-sc0000215-1510915933:86423..86565 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1575043694:86423..86565 | TCONS_00015651-exon-sc0000215-1575043694:86423..86565 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1491911889:88350..88538 | TCONS_00015651-exon-sc0000215-1491911889:88350..88538 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1510915933:88350..88538 | TCONS_00015651-exon-sc0000215-1510915933:88350..88538 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1575043694:88350..88538 | TCONS_00015651-exon-sc0000215-1575043694:88350..88538 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1491911889:89296..89493 | TCONS_00015651-exon-sc0000215-1491911889:89296..89493 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1510915933:89296..89493 | TCONS_00015651-exon-sc0000215-1510915933:89296..89493 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1575043694:89296..89493 | TCONS_00015651-exon-sc0000215-1575043694:89296..89493 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1491911889:89897..89932 | TCONS_00015651-exon-sc0000215-1491911889:89897..89932 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1510915933:89897..89932 | TCONS_00015651-exon-sc0000215-1510915933:89897..89932 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1575043694:89897..89932 | TCONS_00015651-exon-sc0000215-1575043694:89897..89932 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1491911889:90333..91137 | TCONS_00015651-exon-sc0000215-1491911889:90333..91137 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1510915933:90333..91137 | TCONS_00015651-exon-sc0000215-1510915933:90333..91137 | Clytia hemisphaerica | exon |
| TCONS_00015651-exon-sc0000215-1575043694:90333..91137 | TCONS_00015651-exon-sc0000215-1575043694:90333..91137 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000215 | supercontig | sc0000215:85892..91137 + |
Blast
The following BLAST results are available for this feature:
|