TCONS_00015638 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015638
Unique NameTCONS_00015638
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1727

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015638 ID=TCONS_00015638|Name=TCONS_00015638|organism=Clytia hemisphaerica|type=transcript|length=1727bp
CTATCGTCCTCGCCAGATATATTGAATTGGACGAGGGGCTGGTTGGCGTC
AGTTTGACGTACGTGCTCTTATTAAGTGGAATGTTCCAATGGTGCGTTCA
ACAGAGCGCGCAAGTCGATAACCTGATGACCTCGGTACAACGTGCTTTTC
AATACGCTGACCTACATCCAGAACGGGATGAGGGTACGGATAAAGATTTA
CGAGACACGTGGCCGGAATATGGTTTGTTGACATTCGAAAGCGCTTCCTT
TTCATATCACAAATCGCTACCGTacgttttgaaaaagattttcacgGCTG
TGCGTCCATATgaaaagctTGGCATTGTTGGCAGAACAGGTTCCGGCAAA
AGTTCCGTTTTGAACATGCTGTTCCGGCTTGGAAATAATGCGGGAACAGT
CCGTATTGATGGCTATCCGATTGCAGATTTATGTTTGAAGACATTGAGAC
AATCTATTTCTGTTATCCCGCAGTGCCCAGTCCTTTTCAGTGGAACGCTT
CGGAAGAATTTGGATCCATTCAGTGAACACGTTGATGGAGATATCTGGGA
GGCCCTGGATGACGTCCAAATGAAAgacgccattttgaattgtaaacaaa
aacttgatacCATGGTAACAGAGTCAGGAAACAACTGGAGTGTGGGGGAG
CGCCAACTGTTGTGTTTGGCCAGAGCGTTGTTGAGAAGCTGCAAAATCCT
TTTCATCGATGAAGCCACCTCAAACGTCGATAATGAAACGGATGCTTTGG
TGCAAGAGACCATCCGCCGGAAGTTCAAAGAATGCACCGTCATCACGATC
GCTCATCGTTTGAACACGGTTATGGATTCCGATCGAATCATGGTTCTTGA
TAACGGTAAAATGGTTGAACTGGACGAACCAGCCATTCTGTTGGAGAGCT
CAAACGGATACTTCCGTAAATTGGTTGATCAAGCCGGTCGAAATGAAGCT
CATCGATTGGTCAATGTAGCGGAAGATtctaaaagattacgtcatttgtT
ATTGTTACAAAGCAAAACGAAGTATCCGGGCTCACACATTACCGTATCCA
AAACCAAAGCGGAAATCATCAATTATTTCGGGACTCAAGTTGTTTATGAG
ACAACTGTATAAATGTATGGTGATGGTGTTGAACAATTTTAGTGAAATAA
TTTTGACGAAAGCTGTGATCACCaatgattttactttcaatccggtgttt
ttgtaagaaccacgcgcgggcgttctggatgggaaataagtggcttcatt
tcccatccaggagtctcgagtctagcccttcgggcttggaagtcaatgga
gATTCGCATCTAAGCCTTTATCAGTGAAAATCCTGTTTTTTCGGATTTAT
TGAAATTAGTTTTGTATTTGTACCTACATGTAAAGAACTGATGGGGTGGA
CATATTTTATGTAAGGGAAATTTTAACCTCCGTGGCCAACTAAAGGGGGT
GATTTTTTATGCTATAGTATTTCATATATGatatatttttaaacatttta
actTATTTGTGGAGTGCAAAGTACATATAGTTATAGTTTAttaacactta
ttattttttatataaaagggGGACATTTTTCAAACAACATCGATACTATG
GGGGTGAATTTTTCGTTTTGCGTTTTTTATGTAGAATACTCGCAGTAACA
TTTGATTTTGACCGCTATTTTGATGTTCATACGCGCTTATCGAAATTCAT
CGAATCGTTAAGAGTTCATGTCCAAAG
Run BLAST on NCBI

transcript from alignment at sc0000214:400931..410561-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015638 ID=TCONS_00015638|Name=TCONS_00015638|organism=Clytia hemisphaerica|type=transcript|length=9631bp|location=Sequence derived from alignment at sc0000214:400931..410561- (Clytia hemisphaerica)
CTATCGTCCTCGCCAGATATATTGGTAAGTTTTCTTTCTAAATTTGATCT
TATTTCTTCTCTGATATACTTAATCTCCGTATATCAGCCATCTTTGTACC
TATCGTCCTCGCCAGATATATTGGTAAGTTTTCTTTCTAAATTTGATCTT
ATCTCTTCTCTGATATATTTAATCTCCGTATATCAGCCATCTTTGCACCT
ATCGTCCTCGCCAGATATATTGGTAAGTTTTCTTTCTAAATTTGATCTTA
TCTCTTCTCTGATATATTTAATCTCCGTATATCAGCCATCTTTGCACCTA
TCGTCCTCGCCAGATATATTGGTAAGTTTACTTTCTAAATTTGATCTTAT
CTCTTCTCTGATATATTTAATCTCCGTGTATCAGCCATCTTTGCACCTAT
CGTCCTCGCCAGATATATTGGTAAGTTTACTTTCTAAATTTGATCTTATC
TCTTCTCTGATATATTTAATCTCCGTGTATCAGCCATCTTTGCACCTATC
GTCCTCGCCAGATATATTGGTAAGTTTACTTTCTAAATTTGATCTTATCT
CTTCTCTGATATATTTAATCTCCGTGTATCAGCCATCTTTGCACCTATCG
TCCTCGCCAGATATATTGGTAAGTTTTCTTTCTAAATTTGATCTTATTTC
CTCTCTGATATATTTAACCTCCGTGTATCAGCCATCTTTGTACCTATCGT
CCTCGCCAGATATATTGGTAAGTTTTCTTTCTAAATTTGATCTTATTTCT
TCTCTGATATCTTTAACCTCCTTGTATCAGCCATTATTTTTCAATCGCGA
AAATTAATTCCCAAGAATTGCGTTTAGACTGCGAAAATTAGATCCCGCGA
AAATTAGTTCCCTTAAGATAGAAAAGTTATGTATTTCAAGCCATGGCCAG
CTGATAACTTTAGGTAAAATAAAACGAAAGCAGGACCGACAAAAGATGTT
CCGGTTCCTTGATACTGAAAGACAAACAAAATGTTTGGATTTTCTACTAG
ACTACGTATAAAGACTAATACTAAATAGATTAAGTATCTGTTTTTAAGAG
TTTTTTGATACTCTCGAAATGCTTTGCAAGGGTATACTTTTGATAGAGTG
CACTACAAGGGTTTTCTTTTAGCTGGACACGCTGTAAAGGTGTGTTTTGG
AACTGTTAATTGCATGCCATGTACCTTATTACACGAATATTACTAGACAA
GTATTCAACGGCCTTGAAATTAACACGATCTGAAATTAACACGAATTTTT
CTGCTTTTTCAAGGAAGCAGTCGCTGGTCTTAATTAAGGAGGTTTTTATT
AACACGAAATTTTTCAATTCGTGTTTATAAAATGACTAATAATATTCTTG
TAATAAGGTACATCTTTCAGGCATGTAATCCATTGGTTCTTATAAAAGAC
TTTTTATCGTTTTTGGTTGAAACCATTAAAATTGGACGAGGGGCTGGTTG
GCTGAAAATCACGAAAAATAGATTTATTTGATCATATAAAAAACGTCATT
AGTTTAGTTTATTGTTTTTGCTTCAAATCTTTAGAATTGGACGAAGGGCT
GGTTGGCTGAAAATCACGAAAAATAGATTTATTTGATCATATAATATGTA
AACGTCATTAGTTTATTTTATTGTTTTTGCTTCAAACGTTTAGAATTGGA
CGAGGGGCTGGTTGGCGTCAGTTTGACGTACGTGCTCTTATTAAGTGGAA
TGTTCCAATGGTGCGTTCAACAGAGCGCGCAAGTCGATAACCTGATGACC
TCGGTACAACGTGCTTTTCAATACGCTGACCTACATCCAGAACGGGATGA
GGGTACGGATAAAGATTTACGAGACACGTGGCCGGAATATGGTTTGTTGA
CATTCGAAAGCGCTTCCTTTTCATATCACAAATCGCTACCGTACGTTTTG
AAAAAGATTTTCACGGCTGTGCGTCCATATGAAAAGGTTTGTTATATTTT
TATTACCCGTATCAGCCCTTTTGCACCGGCCCTTGTGACAACTTTTTCAA
TCAGCCCGGCCCTTAAATTAGCCCTGGAATTGCACTATAATGATCATTTT
CACAGTACATATAATATATAAAATAATATATAAAATTCAAAACATAAAAA
AAAACTTTCTTTTTGTTGTTTTTTGATGATATTTAAAATCAATCAGTGAA
AAACTTGACTATGGGTTATAAATGAATTTGCAATAAATATTTTTGATTTT
TTTTCACAGTGATGATTTTATATGATCAAGGCAATGATTTACTCTTCAGA
AAATGGCTATTCTTGCAACATTTTTCATCAATTCGATTTCCAATTTTCTG
TTAATATTTCCATCTGAAAACATTTCTCTCCCGAAGAGTGGTAGACCCGA
CATAATTTTGTAAGCGTTTAATTTTTCTTTTCAGCTTGGCATTGTTGGCA
GAACAGGTTCCGGCAAAAGTTCCGTTTTGAACATGCTGTTCCGGCTTGGA
AATAATGCGGGAACAGTCCGTATTGATGGCTATCCGATTGCAGATTTATG
TTTGAAGACATTGAGACAATCTATTTCTGTTATCCCGCAGGTTAGAATAT
ATAATTTAATAGAATCCTCATAATTTATGGGAAATGGTATGATTTGCATT
ATACTTAGATATTTCAATCTCAAAACCATCTTGAGAATTGAATATCTATT
ATAATTAAACAGGGCATTGTAATCTCATTTCAATCATTCTATGTTCAGTT
AAAATAATGAGTTTTGAAGATTTTACTTTATATAAAAATTTGTCCGCCTT
TTTGGGACACACTTTAGTTAATCAATCATGCATAGCAACTCTCAAAATAT
TTTTCCCTCGAAAATTCGATCCTTTTTTATCAAGAGAAATAGGGTATTCC
ACGTTTTTTATAAGAAACATTTTTATAGGGAACTTGAGGCTGAAAATGGT
CCAAAAAATAATGAATTGTTAAGGAACTGCATACTTACATAGATTTACAA
AAACCTAAACAAAAAGTCGATCAAATATTGATGAAACAACGTTCTTTTAT
TGTACTGGTAGTCAATTGTTTAACAAAACATCAAATCAGTCCAAAGTTTG
CATCTAATTAATAAGGAACTCTGAGGCTGAAATTCTCTGAAAAAAATAAG
GAACTCCAGGCTATCCGAGCCAAGTTGAGGTTTCTTATAAAAAAACGTGT
AGAAAGGTTAAACATGGTGCTATTTGCGACGTGAGGTATGATTAACACCC
TAACCGATTCACCCCGCATCCCTGTACAAAGTTTCTTATAGTTTATGTAG
GAATCTATTGAGAGCTATTTTCATTATTTTTTTTGGGGGGATTAGGGCTA
ATAACGGCTAATAACATTTCTTTAAAGTAAGTTTGTGTGAATTATTCAAA
GCTTATGTATACGTATATGAAGCTTTGTGGCCGGGTAGCTCAGTCGGTAG
AGCATTCGCCTTACAATCTAAGGGTTGTGGGTTCGATCCCCGGTCACCGC
CAACTCAGCAGATGAGTAGCTTAGATTGGATAATCTGATCTAGGCGGTAG
GTTACTGGGAGCTGAGAGTAGGTGTGACGCTCCACCTCAGCATTCGATCT
CCCAGGTCTAGCGCAAATAGAAAAGGGATAGACTCCCTCACTCCCGCCAC
CAGATGAATATACTTACTTACTTATGAAGCTGTTTGCCGATCTTTGAAAA
GCAAGACCTTTCAAGACCCTTATCGTCCGCACGTATCCTGCAGCACCCAT
TTTGTCTAAATACACCCCCCCCCCAGATTTAAAAAGATTCCATTTTTTCT
TGTTTCTAGTGCCCAGTCCTTTTCAGTGGAACGCTTCGGAAGAATTTGGA
TCCATTCAGTGAACACGTTGATGGAGATATCTGGGAGGCCCTGGATGACG
TGAGTTAAACACGCTCTTTTGTGACCCCTTACGTTATACTACAGCTTTGG
TCGAGGGTGAGACCGAAGTCTGCGTTTTATAAGAATATACCCTTTTTTCA
TCAGAATTGACCTTTTCATTTCATGATGGATAGTCTTAACTAAATAGTCA
TTCTAATATATTCTTATACTGTATTCTTGGTTAGGAGCCAAAACTCAGCC
TAAAATTAACATGCATAAAATGGCATTTTTTTGAAAGTATCAGTCGAGCC
TTACTGGGGGTAATTTTGCAATTTAGAGTTGAAAATACTCTAGAAATTGC
ATTTTTAAGTTCAGACGCCGAAATTATGGATGAAAGGACCTCTTGCCTTT
CAGCACCCCCAAAGCAATTGACTACTGGAAGGGGGATGTAGGGAATCTCT
TTAACTTAACCCTTTGCATGCCATTCTCTAATATTTCAAGGGCAATTAAT
TAATGATTAATCTCTTAATTTAAGGTCCAAATGAAAGACGCCATTTTGAA
TTGTAAACAAAAACTTGATACCATGGTAACAGAGTCAGGAAACAACTGGA
GTGTGGGGGAGCGCCAACTGTTGTGTTTGGCCAGAGCGTTGTTGAGAAGC
TGCAAAATCCTTTTCATCGATGAAGCCACCTCAAACGTCGATAATGAGTA
TGATTCTTCGAAATCTATCTATTCTTCGCACTAACTTTTATACACCCTGG
ACCAAGTTTCTAAACCCCGGCCAAGCAAAATCTTTGATTGGAGTTTTTTT
TGAAAAGTGGTACCCTTATTGTAGTACTAATCAACAGCGGTGTAAATGCA
TTGAGAGCGTTAGAGTAGAACTACTTTTCCTCAAATCCTTTTGACGAAGT
AGCGCCGCTAGATGTTATTTTTTATCATTGCAAGGGCTTCTTTGCGGGTA
CCACTTTCAAAAAAGGTCCGATCAAAGATGACTGATATAGATTTGTCCAG
GGTTTATAAAAGTCAGTGATTCTACGTTACGCGAGATATATTTTAAGAAA
GCCTGCACCAAACTCTCTAACGGTATCCTTACTTTATCCACACCAATGCA
ATGGTATCTATCGTTATCTATCGTTTTTTTCAAGCCCCCTTCTATGCACT
TTATTTTTCGAAGATTTAGTACCAGAAGTTGGTAGCAGGGAGAAACAGGA
TTCATCTAACTGAAACCGACCGACAGAAAGTAAAAGTCACCACCGGGTAC
TGACTGGTTTTGATCTTATCTGGCACCCACATGGTGAAATTTTCATCCGA
CACGCTAAAGCTCTGAAGGTCGGGAAAATTTTCAACGTCTGGAAGGTTTA
CATTACGGAATTTTACAAGACTGCGTCAGAGATTTTGCAGCCGGAGGTCT
GGTAACCCAGCCCTTGTTTTCGGGGATTGGCAGGTCCAACCGAAATATTT
TTAGCTTTACGCGCAAATATAGTTGACACCGACTGGGGAAGCGGCACTTC
AAAGGCCGACTATCATTCCTCTCCGATGTGAAATTGGTCCGCTCCTTTAG
AGCTTTAGCGTGGGCGGCCGTCAATCGGCCATCGGAATATCAGATAAGCT
TTGATTCTGCATTAAACACTCGCTTTTTCCTTCCTTTTTTGCACAGTGAT
GTTGCAAAGAATAATCACCTGTCTTATTCATATTGTAACCCAATGTTTTA
ACCCATAGGGTACTAACTTGGATCTTTTTCCATAAAATTTTACCATCACC
CTTTTCGGTACACTGTACCAACTTTTTTCCATAGTATGCTGTACTCAGCC
TGCAGAATTTTTAAACAACCTTTTTAGTACACAGTTAGTACACTGTACTA
ACTCTTTTTTGACCACACTACTCTAAGGTTTTCTTTAGTTAGTCACAAGG
CGTTCCATTTTCTTGGCCCATCAATATAGTCCGGTATAATTAGGTTTTTA
CTATTAAAGTGGTTGAATTTTAGCACAGAGTTTCCTGAAATCCAGGTTTC
CCCTGACACCAAAGTTTATCGGCTTAATTCAAAGCAAACGTTTTCCTTTA
ATGAAGATCAATGTATAATGATAATTTTGCGTAGTCAAGAAAAAAACAAC
ACATGAATGAATATTTTTCGGCCAAATTGGTCTTTCTCAACTTAAAAATG
GATTTATTCTATCCTATTTTTGAAAGTTTTGGATATATTTAACGCTTTTC
AGAATTTAAAGTTCGGGCGAGACTTACGACTTGAGTACTTCGACTTGTAT
TACTGAGAATATAGCCTGGATGCAACTGAATCCCTGATATTTCGATTTTG
GAGGGGTTCAGTGGCATCTAGGCATCAGCCTTTTTGGAACAATTTTGAGC
ATTTGGAAGCTGAGATCGTAAGTGTTAAAGCTCACGAGTAAAAGCTTAAT
GTTAAAGCTTAGAGTTATAGCTCAGAGTTGAGACTCAATAGTTAAAGCTC
AAGAGTTAAAGCTCAAGAGTTAAAGCGCAAGAGTTAAAGCGCAAGAGTTA
AAGCGCAAGAGTTAAAGCTTAATGTTAAAGCTTAGAGTTATAGCTCAGAG
TTGAAACTCAATAGTTAAAGCTCAAGAGTTAAAGCGCAAGAGTTAAAGCG
CAAGAGTTAAACTCTTGCTTTCCAGAAGTAAATTGCAACACTTACAAATC
ATTTGTAGTGTTTACAGAGAATTCCCCTTTTCATCAAACACGATTTTTTT
ATAACAATAGTTTACTTTGAAAGAGGATCAAGTATTCTTAAGAAATTGCC
AAAATTGAGAGAGAAATATTCTTAACGTATTCTTACTTTTTTAGACTTGA
CTTTTTTACAAACATGAAAATGATCAATTTGAGATTTTTGGACTTTTGAG
TGAACGTTTGGGTTAAAATTATATTTCTGCCTCAAAGTTTAAATTCAAGT
CTAACTTAAAAAGCAGTTTTTTCTGTTAACCAAATACAAAATGACTGTAT
TCGTATCAAATTCTGTGAAATTCACCCTAGAGGGTGAGGGTATTCTTACG
ATTTGGCTAACTTTTACCCTGAAATTCTTATAGAAGATATTCTTATTAAA
AAAAGCGTGTATTACGACTTTCTTTGTCGATTTTACTGATCACTCTCTAT
CTCTATCTCTTAGAACGGATGCTTTGGTGCAAGAGACCATCCGCCGGAAG
TTCAAAGAATGCACCGTCATCACGATCGCTCATCGTTTGAACACGGTTAT
GGATTCCGATCGAATCATGGTAAGTGTGACCATCATATCTTTGTTTAGTT
ACACTTACAGGTCAACTTTCACTAATCTGAATTTTTATTATTCGAACTAA
AATACTAGTCTCCTCAGCATGTCAATGACATTGAAAAGATAACTGCTACT
ATACATGCGTGATTTATGTGTAATATATAATACAAGTATTACAGGTCCGT
GTTATACACGGCGCAAAATGCAAAAGCACGTGGCAAGCATGTGGATAGAT
TTTGACCTTTAAAAAGGTTCTAGACCAATAAAATACCTTCAGAATGATAT
TTCTAACAATTACAAGTGTTTTTCAACTAAAATACCCTCAGCTGGGAAGT
CGTATAAAATAGTCTCTGTAATTTGAATCTTTCTATAATTCGAGGAAAAT
TCTAGAATTCATTAAACATCGAGTCAACTGTATTTTGGCTGGCGTGGTGC
TCGTGTCTATAGCTCATTTCACGGTTAAAATGTATCTTCGGTTATTAGGG
TTGATTTTAGCCTCTTCTTCTCATAACGGCTTTCCGTTGGATGGACGAAA
AAGCATACAAAATTTCCCACAATCCCTTTCGGCCTTGAGATTGAAACTCT
AGTAGAATAAGCAAGTCTGTATAAAAAAGGAAATGCTCGTTTAGAGCAAT
GCTATTAAAGTCTGTCTCGAAATAATTGCTTTTTTTTCTCAATTTTTTTA
ATTGATAATATTCCACTCTCGAATATCTTTTTAACGAGCACAAAACCGCA
ACTTGATTCGAATTCTATCAAAAGTTACAGCCATTTTTTTCTCCAGCTGC
AAATTATTTCGAGACAGACTTTAGTNGACCCTCAAGGGAATTATAATCTA
TTCCAGATCATTATATAATCGACATTATAATTCCTTTGAGAGTCCCCGAG
GAACCAGAATGCATTGCATTTATCTAAACGCGATATCGTCTATTCTTTTA
ACTTTGATAGAAAATCGTCCGGTAGTTGAGTTCGTCCGGTAGTAGAAAAT
TGTCCGGTATTTGAAAATTTTCCCATTTGCGAAAGTTTCGTCCCTTAAAG
TATTATTTTTTGAGATTGTATTTTATAATTTTTAGGTGCTTAGCATGGTA
ACGAGGTGGTATTGTTGTCACAATAGTTAATTCTTTATGAGTTTTAGTGG
TTAGACATTGTGATTTATATGTGGGGACAAGCTGGAGTTTCTTCAAGCTC
TTATTTGATTTGGTTGGTCGTTAAGATGTAATAAAAGAATATTATTACTT
TTTCTAAAGAACGCGTCATCTCTATCACTTTAAATGACCAATTAGTGAAG
TATCTTGTAAAAACTCCAGCTCATCCCTATATGTGAAGTTCACTAGTCAA
TGATTTGGTCTGATTTTGACTGCGTGTAGGGTAGAGTCGAGGCTTCTAAC
CTTCCCAAGGTTCCTTATCTTCTTTCTTTCGAATGTTGGCTTTTCATCTG
AAGTTTTGGAGAGTGTCATAAAGGGTTATACCAGTAGCTGCTAAACTTGC
TAAATGGTAATGTTAAAAGTTCTTTCGTCTCGAAAGGGTTTCAGTCTCGC
AAAGTATATAAAGAGGCAAAAGCCGTCTCATAGCTCTGCTTAATTCACCA
AAATTTCAAGAATATTTGTTAATTTACTGTGTATAATTCATTTCCCGTCT
TAGACGATAACCCTTTCCTTTGACCACTGAAATAGATTTTTAGGCCCCAG
ATATTTAGGGTCTGGCACATCAATGACTGAGGATTTTTCATTAAAGGTTC
TTGATAACGGTAAAATGGTTGAACTGGACGAACCAGCCATTCTGTTGGAG
AGCTCAAACGGATACTTCCGTAAATTGGTTGATCAAGCCGGTCGAAATGA
AGCTCATCGATTGGTCAATGTAGCGGAAGATTCTAAAAGATTACGTCATT
TGTTATTGTTACAAAGCAAAACGAAGTATCCGGGCTCACACATTACCGTA
TCCAAAACCAAAGCGGAAATCATCAATTATTTCGGGACTCAAGTTGTTTA
TGAGACAACTGTATAAATGTATGGTGATGGTGTTGAACAATTTTAGTGAA
ATAATTTTGACGAAAGCTGTGATCACCAATGATTTTACTTTCAATCCGGT
GTTTTTGTAAGAACCACGCGCGGGCGTTCTGGATGGGAAATAAGTGGCTT
CATTTCCCATCCAGGAGTCTCGAGTCTAGCCCTTCGGGCTTGGAAGTCAA
TGGAGATTCGCATCTAAGCCTTTATCAGTGAAAATCCTGTTTTTTCGGAT
TTATTGAAATTAGTTTTGTATTTGTACCTACATGTAAAGAACTGATGGGG
TGGACATATTTTATGTAAGGGAAATTTTAACCTCCGTGGCCAACTAAAGG
GGGTGATTTTTTATGCTATAGTATTTCATATATGATATATTTTTAAACAT
TTTAACTTATTTGTGGAGTGCAAAGTACATATAGTTATAGTTTATTAACA
CTTATTATTTTTTATATAAAAGGGGGACATTTTTCAAACAACATCGATAC
TATGGGGGTGAATTTTTCGTTTTGCGTTTTTTATGTAGAATACTCGCAGT
AACATTTGATTTTGACCGCTATTTTGATGTTCATACGCGCTTATCGAAAT
TCATCGAATCGTTAAGAGTTCATGTCCAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008723XLOC_008723Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015638-exon-sc0000214-1575043694:410538..410561TCONS_00015638-exon-sc0000214-1575043694:410538..410561Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1575043694:408626..408918TCONS_00015638-exon-sc0000214-1575043694:408626..408918Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1575043694:408022..408177TCONS_00015638-exon-sc0000214-1575043694:408022..408177Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1575043694:406713..406802TCONS_00015638-exon-sc0000214-1575043694:406713..406802Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1575043694:406065..406237TCONS_00015638-exon-sc0000214-1575043694:406065..406237Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1575043694:403543..403648TCONS_00015638-exon-sc0000214-1575043694:403543..403648Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1575043694:400931..401815TCONS_00015638-exon-sc0000214-1575043694:400931..401815Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1510915933:410538..410561TCONS_00015638-exon-sc0000214-1510915933:410538..410561Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1510915933:408626..408918TCONS_00015638-exon-sc0000214-1510915933:408626..408918Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1510915933:408022..408177TCONS_00015638-exon-sc0000214-1510915933:408022..408177Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1510915933:406713..406802TCONS_00015638-exon-sc0000214-1510915933:406713..406802Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1510915933:406065..406237TCONS_00015638-exon-sc0000214-1510915933:406065..406237Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1510915933:403543..403648TCONS_00015638-exon-sc0000214-1510915933:403543..403648Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1510915933:400931..401815TCONS_00015638-exon-sc0000214-1510915933:400931..401815Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1491911889:410538..410561TCONS_00015638-exon-sc0000214-1491911889:410538..410561Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1491911889:408626..408918TCONS_00015638-exon-sc0000214-1491911889:408626..408918Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1491911889:408022..408177TCONS_00015638-exon-sc0000214-1491911889:408022..408177Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1491911889:406713..406802TCONS_00015638-exon-sc0000214-1491911889:406713..406802Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1491911889:406065..406237TCONS_00015638-exon-sc0000214-1491911889:406065..406237Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1491911889:403543..403648TCONS_00015638-exon-sc0000214-1491911889:403543..403648Clytia hemisphaericaexon
TCONS_00015638-exon-sc0000214-1491911889:400931..401815TCONS_00015638-exon-sc0000214-1491911889:400931..401815Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000214supercontigsc0000214:400931..410561 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.137019	0.152519	0.248151	0.224062	0.99996	0.030016	0.52111	0.310808	0.63847	0.413855	0.0282324	0.322573	0.107149	0.141916	0.28484	0.274235	0.296171	0.140282	0.458845	0.184932	0.17513	0.423787	0.355166	0.501499	0.399908	0.202947	0.391813	0.182208	0.352139	0.354151
Blast
[Close]
BLAST of TCONS_00015638 vs. Swiss-Prot (Human)
Match: MRP4 (Multidrug resistance-associated protein 4 OS=Homo sapiens GN=ABCC4 PE=1 SV=3)

HSP 1 Score: 316.62 bits (810), Expect = 1.885e-94
Identity = 161/313 (51.44%), Postives = 224/313 (71.57%), Query Frame = 3 
Query:    3 IVLARYIELDEGLVGVSLTYVLLLSGMFQWCVQQSAQVDNLMTSVQRAFQYADLHPERDEGTDKDLRDTWPEYGLLTFESASFSYHKSLPYVLKKIFTAVRPYEKLGIVGRTGSGKSSVLNMLFRLGNNAGTVRIDGYPIADLCLKTLRQSISVIPQCPVLFSGTLRKNLDPFSEHVDGDIWEALDDVQMKDAILNCKQKLDTMVTESGNNWSVGERQXXXXXXXXXXXXKILFIDEATSNVDNETDALVQETIRRKFKECTVITIAHRLNTVMDSDRIMVLDNGKMVELDEPAILLESSNGYFRKLVDQAGR 941
            ++LA+   LD G VG++L+Y L L GMFQWCV+QSA+V+N+M SV+R  +Y DL  E      K     WP  G++ F++ +F Y    P VLK +   ++  EK+GIVGRTG+GKSS+++ LFRL    G + ID     ++ L  LR+ +S+IPQ PVLF+GT+RKNLDPF+EH D ++W AL +VQ+K+ I +   K+DT + ESG+N+SVG+RQL+CLARA+LR  +IL IDEAT+NVD  TD L+Q+ IR KF  CTV+TIAHRLNT++DSD+IMVLD+G++ E DEP +LL++    F K+V Q G+
Sbjct:  968 LILAK--TLDAGQVGLALSYALTLMGMFQWCVRQSAEVENMMISVERVIEYTDLEKEAPWEYQKRPPPAWPHEGVIIFDNVNFMYSPGGPLVLKHLTALIKSQEKVGIVGRTGAGKSSLISALFRLSEPEGKIWIDKILTTEIGLHDLRKKMSIIPQEPVLFTGTMRKNLDPFNEHTDEELWNALQEVQLKETIEDLPGKMDTELAESGSNFSVGQRQLVCLARAILRKNQILIIDEATANVDPRTDELIQKKIREKFAHCTVLTIAHRLNTIIDSDKIMVLDSGRLKEYDEPYVLLQNKESLFYKMVQQLGK 1278
The following BLAST results are available for this feature:
BLAST of TCONS_00015638 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MRP41.885e-9451.44Multidrug resistance-associated protein 4 OS=Homo ... [more]
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