|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015624 ID=TCONS_00015624|Name=TCONS_00015624|organism=Clytia hemisphaerica|type=transcript|length=1887bp
ACAACCACTGCACCGCCAACCCACCCACCCACAACCACTGcaccaaaaac
cactcaaaaatCGTCAACCGTACCCACGACAACCAATCCGACATCCTCGA
GTAacccaGAACCGTGCAAGCGACTTGGTTTGGAATGTGTTGTCTGTTCA
CAATGCGGTGAAAATGGATTTTGTATCACCAATCTCGATTTACGAAATTC
CAACATGGTTTGTTTATGTCGATATGGTTTCACTGGAAGTCGAGCTAAAT
TTGTTCCTCAGCATTTGGAAACAAGTACATTTACCAAAAATCGAATAAGA
GCTGATTCTTGTGAACTCAAATGCAATTATTCGCCTCATAACAGaaacCC
TCACTGTGTCAAAGAGTCACCCATCCATGTAGAAACAACCAAAACCACCT
ACGCCCCAAAGACGACAACCACGCACGCTCCAAAAACCACAACCACCACA
CACGCTCCAAAAACCACCACCACAGACTCTCCAAAAACAACAACCACACA
CGCCCCAAAAACCACAACCACCCACGCCCCAAAAACAACCAACCACACCC
CAAAAACAACCACAACCACACACGCTCCAAAGACAACAACCACAACACCA
ACGACCACCTCTACAACAATAGTAACGAACAAGCAAACTGAAAACTCAGA
ACCGTGCAAGCGACTTGGTTTGGAATGTGTTGTCTGTTCACATTGCGGTG
AAAATGGATTTTGTATCACCAATCTCGATTTACGAAATTCCAACATGGTT
TGTTTATGTCGATATGGTTTCACTGGAAGTCGAGCTAAATTTGTTCCTCA
ACGTTTGGAAACAAGTACTTTTACCAAAAATCGAATAAGAGCTGATTCTT
GTGAACTCAAATGCAATTATTCGCCTCATAACAGGAATTCCCAATGCGCC
AACTTGGAATGATAAAACTATCCTAATACTAAGCTATCCTATCGTGACAC
AGCCGAAAGGGTGattcaaaaaagtaaacaatatttttaaagaatataat
aatttgtttttgtttagatttttttgtaTGAAATGTATTATTCCAAATTT
TGTGGACGAATTTTTtacgacaatttttttttaatttttagctatttttt
tttcaaatcttttgtaTTTAAAGAACGATTTAGATGATAcgtagaaaaat
aaaataaataagcttGAATGTTTAGATGATCCATTAATAAATCTTTCTga
gtaaaaatataaaaatcactATCTTTTTATGTACACATCAAAATATatgt
ttcaaaaatataaacatttacAAATTATGTTCGGAAAATGTCCGAAAATA
CCAATACTATATTCATAAATTACGTcgcgaacatcacttgcctcgttttg
aaagtATTGCCATGGTAACTAActcccccgggggggggtactagggcaag
atgggttacggggatgctccgctggtcagggtaccttttttaaactccac
gagtcccaggtagcgtcgcaaaaacaccaaaatagaaaaatcagtccctc
gtagggtgcctatttttggaaaatttggggaaaaagtagaaaatttgaga
aaattttggaatttcagtcccattcagggtcacttttttcgcaaatttcg
agtcccacgtagggtccaatTTTCGAATCTCAGCGGaacacccccgtcgg
tcgacaagggtagtaccccccccgggctaaCTCCCACGTCCCagttgatt
ttattaaaactactttcatttataaaaaaagcttttaataTCTCAAAGGA
CATAATAACCattgaaattgtttgaatacgagacaAGTGATGGATAAGTT
GAATTTGATTGCAATTTTGTGTTCGTCGTTGAAAAAGTACCCATGAGAAG
GATATTATCGTATAATGGGTTCATTCAGAAAGTCTTT Run BLAST on NCBI protein sequence of TCONS_00015624-protein >TCONS_00015624-protein ID=TCONS_00015624-protein|Name=TCONS_00015624-protein|organism=Clytia hemisphaerica|type=polypeptide|length=303bp
TTTAPPTHPPTTTAPKTTQKSSTVPTTTNPTSSSNPEPCKRLGLECVVCS
QCGENGFCITNLDLRNSNMVCLCRYGFTGSRAKFVPQHLETSTFTKNRIR
ADSCELKCNYSPHNRNPHCVKESPIHVETTKTTYAPKTTTTHAPKTTTTT
HAPKTTTTDSPKTTTTHAPKTTTTHAPKTTNHTPKTTTTTHAPKTTTTTP
TTTSTTIVTNKQTENSEPCKRLGLECVVCSHCGENGFCITNLDLRNSNMV
CLCRYGFTGSRAKFVPQRLETSTFTKNRIRADSCELKCNYSPHNRNSQCA
NLE Run BLAST on NCBI transcript from alignment at sc0000214:390347..400585+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015624 ID=TCONS_00015624|Name=TCONS_00015624|organism=Clytia hemisphaerica|type=transcript|length=10239bp|location=Sequence derived from alignment at sc0000214:390347..400585+ (Clytia hemisphaerica)
ACAACCACTGCACCGCCAACCCACCCACCCACAACCACTGcaccaaaaac
cactcaaaaatCGTCAACCGTACCCACGACAACCAATCCGACATCCTCGA
GTAgtaagtcaatttttttggtcaTCATATTCATCGAGTTCACATGGAAT
AGCTAAAGGGAATAATTGTTGATAAAGTTGGGAATTGGCCttaaattaaa
catttttgCCACTTTCCTAAATAAATTCTCGCAACATTCCATTCACTTTT
GTTCATTTCTTCATTCTTCTTAAAATGCTCTTTTGCGTATAATTCTTATG
ATATTCAAGAAGAAAATGACAGAtcaaattacaaaattttctcccgctaa
attcaaaaatattcttgaaGCGCCCAAATAAATCCTGGAAAATTAAATGA
GCAATCATTCGCCAAAATCTCTTTCTTGAAATCACACATTGAACAgcaga
aaatctttttgattaagtttgattttAAGGAGGGCAGTAATTTTCGATAG
GCTGAATCAAATTAGGTCTTTTAAAACAATGCTTGTAACAATTTAAAGAT
GTCAAAAACCGCGGgctttgatttttgggaaaaataatCAATATCAAATA
TCGaagtgaaaatatcaaaatcatctGTCAGAATTAGCTCGTGATTTTTC
TCCTGTATTTCCCCAGAGTCGAACAAGCggccttttttctttttcgtttt
ttgtgtatgtaatttttcgtatattttacagacccaGAGCCGTGCAAGAG
ACTTGGTTTGGAATGTGTTGTCTGTTCACAATGCGGTGAAAATGGATTTT
GTATCACCAATCTGGATTTACGAGNTGCAAGCGACTTGGTTTGGAATGTG
TTGTCTGTTCACAATGCGGTGAAAATGGATTTTGTATCACCAATCTCGAT
TTACGAAATTCCAACATGGTTTGTTTATGTCGATATGGTTTCACTGGAAG
TCAAGCTAAATTTGTTCCTCAACGTTTGGAAACAAGTGCTTTTACCAAAA
ATCGAATAAGAGCTGACTCTTGTGACCTCAAGTGCAATTATTCACCTCAT
AACAGGTATCTAACCTCTTCCATTGGTTCGCTTGACTGCGTTAAacgttt
ttttcatgaaaaaaactatataagaacataaggcttcgatggccaaaatg
ttaaaaataagttaagaacatttttaggcttgaaactcacaaagttaaga
acatctgtagggtaggcttcaaaaattttagatgttctaataaaagaaac
gTGTACTTTATCACACACAATAAGATCTGCCATGTTTGAGTTGTTTTTAA
ATTGGTACCTGCAAAAAGCTATTGTAgtgctaaaactttggggctaAAAC
GGGGCTACATCACTTGTGTTCAAGCGAAGCGCTCTCGatgtgtttttcaa
aaaaactcattcAATTTAACACTTTTTCAATACGAAGCTTTGCCAAGATC
AACATCATGGAAACTGGATTGAAttgatgtttcaatttttttttctgata
tttttcacTTGTAGAAACGAACAATGTGTCAACAGTGCTTTGCCTTCCGT
CATTCCCACGACAACGATTACATCATCAACAACGACGTCGACAACAACGG
CCCAACCCTCGTCACCAGTCCCTCAAACCACACAAGCGACGCCGACAACC
GCCAAGATACAAACTGTCACTTACagtaaagttttgattttcttttaggG
GATAATTAGGTGGTTTCAAATTCTAGAATTAGAAACCCGTAGGGGAGAGG
GGTGCTAGAGTTGGCTGATGAGGGATATGCACGGACGGGActtccgaaaa
ccgacccttagagaaacCAAATTTAATGTGAAAAATGCCCCTTAGATAGT
CTACGATTTTTGTAAATgtcttttttacaattttttacaatttttgaaga
tttcctataaatcgtgaattttccgatTCTTTGAGGGACTACATTGAAAT
TCTCCGCCGATTTCTGTAGCCCTTAGGGAGACTTTGGTAGGTGAAAAAAG
CGACCCTTATTATTGTCCACACATATCCAGAACCCAGTACCCTCACCCGG
TTAGAAACCCTTTGTTGTGTGAGTGAAACCTCTAAATATTTTGGTCTAAC
GTCTTTCTGAAGTTGAGATATGACAGAAATCTCTAAAAATCTCTTGATAC
TTGAATATCTCGActtaaaaaaaagacaaaaatatttagaaGTTTTTCCC
AGGACCTCGAAAATAACCGACAGGCTAAagatctcaaaccatctgattat
ccctttaacttttttttcacatacacgtaatattttcttacacAAAAAGC
TTCGCGAAAAAACGTTCTGACCattcacattttttacaattttcatcatG
AGGTAATCACAAATTCTGAAAgaattcagaaattttgactGATTGTTAAA
AGAATGCATTTTAGTATCTTAatcaagggaagaaattttggtggatcTGG
AGAATTACCTCGAAAATTCGCCAAAAGAAATTTCCGCCATATTCAGATTT
ACAGGCCATTTggcaaaattaattctcgcaaaattaaaaaattttattaa
gtcgccaaaataaattctgccaaattgcaccaaaattggtGAATGggctc
attcgccaaaatttcttctcttaaggtattcTATTTTTTTCAGCTTTCTT
ATCAAAAAGTGTATTTTACTTTCAGACCCAAACAACCCTCCCGAATGTAG
AGTGTCCGGATTAAATTGCATCCGGTGTGATCAATGCGGGCAGTCCGGAT
ATTGTGTTACGAATGATGGATCGGAACTAAAGTGTTTGTGCCAATACGGG
TTTACCGGTGTGGATGGTGGCCAGTATATCGGAGAACATCCGGTTAACAc
attctttttgtttacaaagaATCGGATTCGAGCGAAAGACTGTCTCAGAC
AATGTCATTACAGCCCGTTCCGCAGGTACCATAAACTCTCGATAACCATT
CTAACTCAAAATTTCTTAGCTCGAACAATTCTGGCTGCAACTTTCTAAAC
TCGAAGAATTCTGACTGCAACTTTATAACTTGAACCACCGTAACTCGATT
TTTCTTAGCTTAGACCATTGTAACTCCAACTTTCTTAGCTTGAACCATTC
TAACTGCAACTTTCTAAACTCGAACAATTCTGACTGCAACTTTATAACTC
GAACCATCGTAACTCGATTTTTCTTAGCTTAGACCATTGTAACTCCAACT
TTCTTTATAGCTCGAATTTTTCTAACTTGAACATCTCCTATAACCTTAGA
CTAGAGTCTAATTctgattgatttttaatttctgTTAGTATTAACGGTGA
GACATTGAGTGAAGCGGGCTGGCTAGAGGATTCCACTACCTAAATATATT
TCACTTtcatttcgaaaaattgtacaaaaataccaaaacaacataaaaat
aaaataaaatacataGAAGTACCTACCAAATGTTAAAAAAGAATAGCACG
CTTAGCCTGCAGATAATGTTCGAGTCTAGTCAAAGAATATAAACGATTAT
CTCCCCTTTCGGAAATACGCAACCGTGGGTTTCTAAAGTTATCTTACAAA
TAGAAGATAGGGTTGCTTTAAACATCAATATTTTTTCAAGGAACACCCAT
TGTGCTAAAGAGTCACCCAGCTATGTGGAAACGNAAATTTTCTGCCGGGA
AAATTTCTGTCGTTATTTTTTGTtatcttttatcatttttaagaaacCCT
CACTGTGTCAAAGAGTCACCCATCCATGTAGAAACAACCAAAACCACCTA
CGCCCCAAAGACGACAACCACGCACGCTCCAAAAACCACAACCACCACAC
ACGCTCCAAAAACCACCACCACAGACTCTCCAAAAACAACAACCACACAC
GCCCCAAAAACCACAACCACCCACGCCCCAAAAACAACCAACCACACCCC
AAAAACAACCACAACCACACACGCCCCAAAGACTACAACAACGCACGCCC
CAAAAACCACAACCCTTGCGCACACAACAGTAACAACAACACCAACGACC
ACCTCTACAACTCCAGCAACGACCAAGCAAACTGAAGAAAGTAAGAAACC
TTCCTGTTGAAATTTTCATCGCTGAGGGCTTCTTTTTTACGCCGAAACGA
TTTTAATCCGAATACGCAACTTTGCTTACAAAGAGACTTAATCGGCCTTT
CGTTACGTTGTGAATATTAAATGCATCATTTTGAATTCAATCTCGACGCA
GTTCACCAAATTCGACTCTATTAAAAAATGTGTCCATTGTAGCGCATTGT
TTTTCGTgcaatttgaaaacaaaacgcCGTGGAATAACATACTTGAATCC
CTCCtgtatattttacagacccaGAACCGTGCAAGCGACTTGGTTTGGAA
TGTGTTGTCTGTTCACAATGCGGTGAAAATGGATTTTGTATCACCAATCT
CGATTTACGAAATTCCAACATGGTTTGTTTATGTCGATATGGTTTCACTG
GAAGTCGAGCTAAATTTGTTCCTCAGCATTTGGAAACAAGTACATTTACC
AAAAATCGAATAAGAGCTGATTCTTGTGAACTCAAATGCAATTATTCGCC
TCATAACAGGTATCTAGTCTCTCGTGTTGAAATTTTCGCGATTATTGCAA
ATTGTTAGAATTCGCGAGATTAAATGATTGCAAAactaaattcccgcgaa
atttggTTATTTCGTTCAAGCTCAGTTATCAAAACTCCCTCATTCTAAAG
TTTTTATAGAAAGGAAGTTTTTAGAAATCAGTAAAACAAATACTTTCACG
CTTTACTTTAAGAGAAAgccaggaaaagttttttactCTCTCGTcatgat
tcgcgaaattaaatctccGCGAAATACAAAAAAATGCAATAATAGCCTGA
ATCACGAAATTTTCTGCCGGGAAAATTTCTGTCGTTATTTTTTGTtatct
tttatcatttttaagaaacCCTCACTGTGTCAAAGAGTCACCCATCCATG
TAGAAACAACCAAAACCACCTACGCCCCAAAGACGACAACCACGCACGCT
CCAAAAACCACAACCACCACACACGCTCCAAAAACCACCACCACAGACTC
TCCAAAAACAACAACCACACACGCCCCAAAAACCACAACCACCCACGCCC
CAAAAACAACCAACCACACCCCAAAAACAACCACAACCACACACGCTCCA
AAGACAACAACCACAACACCAACGACCACCTCTACAACAATAGTAACGAA
CAAGCAAACTGAAAGTAAGAAATTTTCTTGTTAGAATTTTCCCATGAGTA
GTGGAGAAGAAAGAACCTCAAAACATAAGTTCAGGTCAAAATTTAAAGCT
ATGAATGAATCCAAAGTAACCTTTCTCAACTAAATATTCCAATGTTATGC
AAATCAGATTCTTTGCTCTGTCTAAATATATATATAGTCGAACCTCAAAA
TATGACTTCTTTATGAGCGTGTCAATACAATGGCTTTAGATATTGACACA
TTGTTTCCAGAGGTGCTCCCTCTCAAGGATCCCTTTAAGTAATAGGGTTT
GCAAGATGTCCGTGTATTTTACGGGTCTATACCTATTCAAGGGACacttt
gagaaattctttcCGGTATATTTTACAGACTCAGAACCGTGCAAGCGACT
TGGTTTGGAATGTGTTGTCTGTTCACATTGCGGTGAAAATGGATTTTGTA
TCACCAATCTCGATTTACGAAATTCCAACATGGTTTGTTTATGTCGATAT
GGTTTCACTGGAAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAGGGGGTAATAATGCGCAC
ATCATCTTTTTTCGCCTATATTGGCTACATAACTTAATTGAATAATGAAG
AGCTCAAATATGTTTAAAATCCTGGACAGAAGTGAGGAAGGTTTGACCAA
TATAAAACTCGTACTACAATTTCACGACACATTTATTTGCACTTTTTGGC
ATCTCAGGGGGCAAAATTCGGAGCATTCTCCGACCTCCATgttgtaccct
gagtatcaacCTCAGGACGACCaagtatagaaattttatcgcgcatgtgt
caatctaatcactatagagagaatcaaagatgaagagcaaNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNATTTCGATTAAGTCCaacattttct
atgtttttgtcgagtttttgagtattttaaagcgtgtaatttgttaAAGA
GGGTCAAAACAGGCCAAAAATAGGCAAAAGCGGCTTCTTTTTACCCGTTT
TTCTCCTTGCGAGCACCTGGAAAACATCTTTCGAAGCTTTTTGTTTTACT
ACTTCTTTTGAGTATATTTACCGAGTTTCAAGACATTTCCATGGCTAAGA
TAAAAAGATATGGACTGATGTTACTGACATAAAACGACTTCTCAATAGTA
ATTCCTTACCNTTTGGTAACTCAGTATACCCTAAAGaacatctgtgccaa
ttttcagcttgatggcaattttgtccgggttgtggtgaaatttcaactaa
ttctacctgactataaGTTCAGGTCAAAATTTAAAGCTATGAATGAATCC
AAAGTAACCTTTCTCAACTAAATATTCCAATGTTATGCAAATCAGATTCT
TTGGTCTGTCTAAATATATATATAGTCGAACCTCAAAATATGACTTCTTT
ATGAGCGTGTCAATACAATGGCTTTAGATATTGACACATTGTTTCCAGAG
GTGCTCCCTCTCAAGGATCCCTTTAAGTAATAGGGTTTGCAAGATGTCCG
TGTATTTTACGGGTCTATACCTATTCAAGGGACactttgagaaattcttt
cCGGTATATTTTACAGACTCAGAACCGTGCAAGCGACTTGGTTTGGAATG
TGTTGTCTGTTCACATTGCGGTGAAAATGGATTTTGTATCACCAATCTCG
ATTTACGAAATTCCAACATGGTTTGTTTATGTCGATATGGTTTCACTGGA
AGTCGAGCTAAATTTGTTCCTCAACGTTTGGAAACAAGTACTTTTACCAA
AAATCGAATAAGAGCTGATTCTTGTGAACTCAAATGCAATTATTCGCCTC
ATAACAGGTACATTCTTTTAAAATGTCCGCATTTTTTAGAAAAGAGAACG
AGAAAGTAATAAAATCTGATCACAACTTCTGACCTCGAAGCTTCAAGTAG
CCGAAAGAAATTCAGCGGCTTAAATGTGGATGAGTAGCTTTCTTTAGGTA
CACTATAGATCTCTAAATAAACAATCGAGTAATGTTTAATAGCTAAATTT
GGCAGCCTAGCAAGCAATGCTGAAGGTTTATAGGTATAAGTCATCCCTTT
CAACCCTTTAAAGCGCGAATAAGCTTGGGTTTAAGTTCACAAGGTAGGAT
TAACGTCAAATGTCGAAATAGgaaatttcgtgttaattaaaaccagccgt
ggtgtcctttaaaagaccatgttcgcacgtatcggttccgtttcgctgtt
aagcgaaatgaagccattctattggttagaagtgattggatagaatggct
tcatttcgttttggAGCGGAACAGAATCGTAGTGTGTGAACGTGGtctaa
aaagaaaatgaagttcGCGTTTTATTCTTCGCTTGTTGATTTTAAGGCCG
TTAATTGTGTGTCTACTTATTTTCATGTAAATAGGTACATAGTTTCATCT
ACTTTTAATATTTAATAATGCTCGTTCTTTTTTCAGGAATTCCCAATGCG
CCAACTTGGAATGATAAAACTATCCTAATACTAAGCTATCCTATCGTGAC
ACAGCCGAAAGGGTGattcaaaaaagtaaacaatatttttaaagaatata
ataatttgtttttgtttagatttttttgtaTGAAATGTATTATTCCAAAT
TTTGTGGACGAATTTTTtacgacaatttttttttaatttttagctatttt
tttttcaaatcttttgtaTTTAAAGAACGATTTAGATGATAcgtagaaaa
ataaaataaataagcttGAATGTTTAGATGATCCATTAATAAATCTTTCT
gagtaaaaatataaaaatcactATCTTTTTATGTACACATCAAAATATat
gtttcaaaaatataaacatttacAAATTATGTTCGGAAAATGTCCGAAAA
TACCAATACTATATTCATAAATTACGTcgcgaacatcacttgcctcgttt
tgaaagtATTGCCATGGTAACTAActcccccgggggggggtactagggca
agatgggttacggggatgctccgctggtcagggtaccttttttaaactcc
acgagtcccaggtagcgtcgcaaaaacaccaaaatagaaaaatcagtccc
tcgtagggtgcctatttttggaaaatttggggaaaaagtagaaaatttga
gaaaattttggaatttcagtcccattcagggtcacttttttcgcaaattt
cgagtcccacgtagggtccaatTTTCGAATCTCAGCGGaacacccccgtc
ggtcgacaagggtagtaccccccccgggctaaCTCCCACGTCCCagttga
ttttattaaaactactttcatttataaaaaaagcttttaataTCTCAAAG
GACATAATAACCattgaaattgtttgaatacgagacaAGTGATGGATAAG
TTGAATTTGATTGCAATTTTGTGTTCGTCGTTGAAAAAGTACCCATGAGA
AGGATATTATCGTATAATGGGTTCATTCAGAAAGTCTTT Coding sequence (CDS) from alignment at sc0000214:390347..400585+ >TCONS_00015624 ID=TCONS_00015624|Name=TCONS_00015624|organism=Clytia hemisphaerica|type=CDS|length=4560bp|location=Sequence derived from alignment at sc0000214:390347..400585+ (Clytia hemisphaerica)
ACAACCACTGCACCGCCAACCCACCCACCCACAACCACTGcaccaaaaac
cactcaaaaatCGTCAACCGTACCCACGACAACCAATCCGACATCCTCGA
GTAacccaGAACCGTGCAAGCGACTTGGTTTGGAATGTGTTGTCTGTTCA
CAATGCGGTGAAAATGGATTTTGTATCACCAATCTCGATTTACGAAATTC
CAACATGGTTTGTTTATGTCGATATGGTTTCACTGGAAGTCGAGCTAAAT
TTGTTCCTCAGCATTTGGAAACAAGTACATTTACCAAAAATCGAATAAGA
GCTGATTCTTGTGAACTCAAATGCAATTATTCGCCTCATAACAGaaacCC
TCACTGTGTCAAAGAGTCACCCATCCATGTAGAAACAACCAAAACCACCT
ACGCCCCAAAGACGACAACCACGCACGCTCCAAAAACCACAACCACCACA
CACGCTCCAAAAACCACCACCACAGACTCTCCAAAAACAACAACCACACA
CGCCCCAAAAACCACAACCACCCACGCCCCAAAAACAACCAACCACACCC
CAAAAACAACCACAACCACACACGCTCCAAAGACAACAACCACAACACCA
ACGACCACCTCTACAACAATAGTAACGAACAAGCAAACTGAAAACTCAGA
ACCGTGCAAGCGACTTGGTTTGGAATGTGTTGTCTGTTCACATTGCGGTG
AAAATGGATTTTGTATCACCAATCTCGATTTACGAAATTCCAACATGGTT
TGTTTATGTCGATATGGTTTCACTGGAAGTCGAGCTAAATTTGTTCCTCA
ACGTTTGGAAACAAGTACTTTTACCAAAAATCGAATAAGAGCTGATTCTT
GTGAACTCAAATGCAATTATTCGCCTCATAACAGGAATTCCCAATGCGCC
AACTTGGAATGAACAACCACTGCACCGCCAACCCACCCACCCACAACCAC
TGcaccaaaaaccactcaaaaatCGTCAACCGTACCCACGACAACCAATC
CGACATCCTCGAGTAacccaGAACCGTGCAAGCGACTTGGTTTGGAATGT
GTTGTCTGTTCACAATGCGGTGAAAATGGATTTTGTATCACCAATCTCGA
TTTACGAAATTCCAACATGGTTTGTTTATGTCGATATGGTTTCACTGGAA
GTCGAGCTAAATTTGTTCCTCAGCATTTGGAAACAAGTACATTTACCAAA
AATCGAATAAGAGCTGATTCTTGTGAACTCAAATGCAATTATTCGCCTCA
TAACAGaaacCCTCACTGTGTCAAAGAGTCACCCATCCATGTAGAAACAA
CCAAAACCACCTACGCCCCAAAGACGACAACCACGCACGCTCCAAAAACC
ACAACCACCACACACGCTCCAAAAACCACCACCACAGACTCTCCAAAAAC
AACAACCACACACGCCCCAAAAACCACAACCACCCACGCCCCAAAAACAA
CCAACCACACCCCAAAAACAACCACAACCACACACGCTCCAAAGACAACA
ACCACAACACCAACGACCACCTCTACAACAATAGTAACGAACAAGCAAAC
TGAAAACTCAGAACCGTGCAAGCGACTTGGTTTGGAATGTGTTGTCTGTT
CACATTGCGGTGAAAATGGATTTTGTATCACCAATCTCGATTTACGAAAT
TCCAACATGGTTTGTTTATGTCGATATGGTTTCACTGGAAGTCGAGCTAA
ATTTGTTCCTCAACGTTTGGAAACAAGTACTTTTACCAAAAATCGAATAA
GAGCTGATTCTTGTGAACTCAAATGCAATTATTCGCCTCATAACAGGAAT
TCCCAATGCGCCAACTTGGAATGAACAACCACTGCACCGCCAACCCACCC
ACCCACAACCACTGcaccaaaaaccactcaaaaatCGTCAACCGTACCCA
CGACAACCAATCCGACATCCTCGAGTAacccaGAACCGTGCAAGCGACTT
GGTTTGGAATGTGTTGTCTGTTCACAATGCGGTGAAAATGGATTTTGTAT
CACCAATCTCGATTTACGAAATTCCAACATGGTTTGTTTATGTCGATATG
GTTTCACTGGAAGTCGAGCTAAATTTGTTCCTCAGCATTTGGAAACAAGT
ACATTTACCAAAAATCGAATAAGAGCTGATTCTTGTGAACTCAAATGCAA
TTATTCGCCTCATAACAGaaacCCTCACTGTGTCAAAGAGTCACCCATCC
ATGTAGAAACAACCAAAACCACCTACGCCCCAAAGACGACAACCACGCAC
GCTCCAAAAACCACAACCACCACACACGCTCCAAAAACCACCACCACAGA
CTCTCCAAAAACAACAACCACACACGCCCCAAAAACCACAACCACCCACG
CCCCAAAAACAACCAACCACACCCCAAAAACAACCACAACCACACACGCT
CCAAAGACAACAACCACAACACCAACGACCACCTCTACAACAATAGTAAC
GAACAAGCAAACTGAAAACTCAGAACCGTGCAAGCGACTTGGTTTGGAAT
GTGTTGTCTGTTCACATTGCGGTGAAAATGGATTTTGTATCACCAATCTC
GATTTACGAAATTCCAACATGGTTTGTTTATGTCGATATGGTTTCACTGG
AAGTCGAGCTAAATTTGTTCCTCAACGTTTGGAAACAAGTACTTTTACCA
AAAATCGAATAAGAGCTGATTCTTGTGAACTCAAATGCAATTATTCGCCT
CATAACAGGAATTCCCAATGCGCCAACTTGGAATGAACAACCACTGCACC
GCCAACCCACCCACCCACAACCACTGcaccaaaaaccactcaaaaatCGT
CAACCGTACCCACGACAACCAATCCGACATCCTCGAGTAacccaGAACCG
TGCAAGCGACTTGGTTTGGAATGTGTTGTCTGTTCACAATGCGGTGAAAA
TGGATTTTGTATCACCAATCTCGATTTACGAAATTCCAACATGGTTTGTT
TATGTCGATATGGTTTCACTGGAAGTCGAGCTAAATTTGTTCCTCAGCAT
TTGGAAACAAGTACATTTACCAAAAATCGAATAAGAGCTGATTCTTGTGA
ACTCAAATGCAATTATTCGCCTCATAACAGaaacCCTCACTGTGTCAAAG
AGTCACCCATCCATGTAGAAACAACCAAAACCACCTACGCCCCAAAGACG
ACAACCACGCACGCTCCAAAAACCACAACCACCACACACGCTCCAAAAAC
CACCACCACAGACTCTCCAAAAACAACAACCACACACGCCCCAAAAACCA
CAACCACCCACGCCCCAAAAACAACCAACCACACCCCAAAAACAACCACA
ACCACACACGCTCCAAAGACAACAACCACAACACCAACGACCACCTCTAC
AACAATAGTAACGAACAAGCAAACTGAAAACTCAGAACCGTGCAAGCGAC
TTGGTTTGGAATGTGTTGTCTGTTCACATTGCGGTGAAAATGGATTTTGT
ATCACCAATCTCGATTTACGAAATTCCAACATGGTTTGTTTATGTCGATA
TGGTTTCACTGGAAGTCGAGCTAAATTTGTTCCTCAACGTTTGGAAACAA
GTACTTTTACCAAAAATCGAATAAGAGCTGATTCTTGTGAACTCAAATGC
AATTATTCGCCTCATAACAGGAATTCCCAATGCGCCAACTTGGAATGAAC
AACCACTGCACCGCCAACCCACCCACCCACAACCACTGcaccaaaaacca
ctcaaaaatCGTCAACCGTACCCACGACAACCAATCCGACATCCTCGAGT
AacccaGAACCGTGCAAGCGACTTGGTTTGGAATGTGTTGTCTGTTCACA
ATGCGGTGAAAATGGATTTTGTATCACCAATCTCGATTTACGAAATTCCA
ACATGGTTTGTTTATGTCGATATGGTTTCACTGGAAGTCGAGCTAAATTT
GTTCCTCAGCATTTGGAAACAAGTACATTTACCAAAAATCGAATAAGAGC
TGATTCTTGTGAACTCAAATGCAATTATTCGCCTCATAACAGaaacCCTC
ACTGTGTCAAAGAGTCACCCATCCATGTAGAAACAACCAAAACCACCTAC
GCCCCAAAGACGACAACCACGCACGCTCCAAAAACCACAACCACCACACA
CGCTCCAAAAACCACCACCACAGACTCTCCAAAAACAACAACCACACACG
CCCCAAAAACCACAACCACCCACGCCCCAAAAACAACCAACCACACCCCA
AAAACAACCACAACCACACACGCTCCAAAGACAACAACCACAACACCAAC
GACCACCTCTACAACAATAGTAACGAACAAGCAAACTGAAAACTCAGAAC
CGTGCAAGCGACTTGGTTTGGAATGTGTTGTCTGTTCACATTGCGGTGAA
AATGGATTTTGTATCACCAATCTCGATTTACGAAATTCCAACATGGTTTG
TTTATGTCGATATGGTTTCACTGGAAGTCGAGCTAAATTTGTTCCTCAAC
GTTTGGAAACAAGTACTTTTACCAAAAATCGAATAAGAGCTGATTCTTGT
GAACTCAAATGCAATTATTCGCCTCATAACAGGAATTCCCAATGCGCCAA
CTTGGAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015624-exon-sc0000214-1491911889:390347..390449 | TCONS_00015624-exon-sc0000214-1491911889:390347..390449 | Clytia hemisphaerica | exon |
| TCONS_00015624-exon-sc0000214-1510915933:390347..390449 | TCONS_00015624-exon-sc0000214-1510915933:390347..390449 | Clytia hemisphaerica | exon |
| TCONS_00015624-exon-sc0000214-1575043694:390347..390449 | TCONS_00015624-exon-sc0000214-1575043694:390347..390449 | Clytia hemisphaerica | exon |
| TCONS_00015624-exon-sc0000214-1491911889:394665..394905 | TCONS_00015624-exon-sc0000214-1491911889:394665..394905 | Clytia hemisphaerica | exon |
| TCONS_00015624-exon-sc0000214-1510915933:394665..394905 | TCONS_00015624-exon-sc0000214-1510915933:394665..394905 | Clytia hemisphaerica | exon |
| TCONS_00015624-exon-sc0000214-1575043694:394665..394905 | TCONS_00015624-exon-sc0000214-1575043694:394665..394905 | Clytia hemisphaerica | exon |
| TCONS_00015624-exon-sc0000214-1491911889:395262..395560 | TCONS_00015624-exon-sc0000214-1491911889:395262..395560 | Clytia hemisphaerica | exon |
| TCONS_00015624-exon-sc0000214-1510915933:395262..395560 | TCONS_00015624-exon-sc0000214-1510915933:395262..395560 | Clytia hemisphaerica | exon |
| TCONS_00015624-exon-sc0000214-1575043694:395262..395560 | TCONS_00015624-exon-sc0000214-1575043694:395262..395560 | Clytia hemisphaerica | exon |
| TCONS_00015624-exon-sc0000214-1491911889:398713..398953 | TCONS_00015624-exon-sc0000214-1491911889:398713..398953 | Clytia hemisphaerica | exon |
| TCONS_00015624-exon-sc0000214-1510915933:398713..398953 | TCONS_00015624-exon-sc0000214-1510915933:398713..398953 | Clytia hemisphaerica | exon |
| TCONS_00015624-exon-sc0000214-1575043694:398713..398953 | TCONS_00015624-exon-sc0000214-1575043694:398713..398953 | Clytia hemisphaerica | exon |
| TCONS_00015624-exon-sc0000214-1491911889:399583..400585 | TCONS_00015624-exon-sc0000214-1491911889:399583..400585 | Clytia hemisphaerica | exon |
| TCONS_00015624-exon-sc0000214-1510915933:399583..400585 | TCONS_00015624-exon-sc0000214-1510915933:399583..400585 | Clytia hemisphaerica | exon |
| TCONS_00015624-exon-sc0000214-1575043694:399583..400585 | TCONS_00015624-exon-sc0000214-1575043694:399583..400585 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000214 | supercontig | sc0000214:390347..400585 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000742 | EGF-like_dom |
Blast
The following BLAST results are available for this feature:
|
