TCONS_00015545 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00015545
Unique Name	TCONS_00015545
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1163

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000212:328736..336278-
coding sequence from alignment at sc0000212:328736..336278-

transcript sequence

>TCONS_00015545 ID=TCONS_00015545|Name=TCONS_00015545|organism=Clytia hemisphaerica|type=transcript|length=1163bp
CTTGGAGAAACAGATGTTAGAATTCACCAGTTCCAAACCGCTATCAACGG
AAGATTTGAGATCAATGGTTTACTTTGAAGCACGTGCTGATGGTGCATCA
GACTTGACGATTAATGATCAAGacaagttttacgtcactttgtCCAGATA
TGATGAAAAACTGGGAAGATTACCAGATGTCTCAAGATTGAACATTTACA
AAAAAGGTTTTGCAACAAAACGTTACATCAACTTGATTTTCAACAATGTA
GAAAGCTACCCAATCACTGTCTCAAGCAATAAAATCATTTCTGATGATCT
TGTTTACTCAAACAATCCAAAGACTTTCACCGTATACCCAGGTGCTTCAA
AACGTGTTTCGTTCGTCTTCTGGTCATTCAACCTAGATTCGTTGACCACA
GATCGcgaaatgacgtcattgacagCCAACGCCCATCAACAACCTATCAT
GTTGAATGGAAATCGAAAGTACTTCTTGAATACAAACAGTTTGCAACGAA
AATGTGATAATGATGAATATACACCAATCACATTATCTGCTCCTAAAGAG
TTCACTTCGAACGTAGAATTTATCGTCTCCAACAGCCTCTCGTTTCCTGT
TCAACTAAAATGGAAACTAAGCGATCCACAAATCACAATCACTTCTGCAT
CTCAACTTACCATCCAACCTGGTGCTCGAGCACAAAAAGTTTTATTCACA
TTCAAAAGCAAGAAGCCTCTGTCACCAAGAGAAATGAATAATTTGATGAC
TCTGTCCGGAATAAGTGTCCGAGATAATCAACCAGTTCTGTTGAACGGGA
AGAGTTCTATTTTAATATCACCACGATCGCCAGCAGATGAAGAGGATGTT
CAAAGTATCCCCATTCGAATCTCTTTGAAAGTAACTCGCTTCCCTGTTAA
TCTCAAAGTCAGCAATATACTACCGTATCCAATCATATTCATCGGGCGAT
TCCTTGTCAGCTCGCAATACACCATCATCAGTCGCCGGTCTTATGAAATT
CCCTCAGGAGAATCAAAGATGGTGTCGTTCTTCATCAATGGCCCGTCGAG
GCCGACCAAGTTCGGCTTGACCTTTGATGTTATACCAAGTAACAGGGCTG
AAGATATTTTATTGATTAGTGGAAAGAGGCTATTCGTATTTGATGAAATC
CCAAAAAGAGGCG

Run BLAST on NCBI

protein sequence of TCONS_00015545-protein

>TCONS_00015545-protein ID=TCONS_00015545-protein|Name=TCONS_00015545-protein|organism=Clytia hemisphaerica|type=polypeptide|length=387bp
LEKQMLEFTSSKPLSTEDLRSMVYFEARADGASDLTINDQDKFYVTLSRY
DEKLGRLPDVSRLNIYKKGFATKRYINLIFNNVESYPITVSSNKIISDDL
VYSNNPKTFTVYPGASKRVSFVFWSFNLDSLTTDREMTSLTANAHQQPIM
LNGNRKYFLNTNSLQRKCDNDEYTPITLSAPKEFTSNVEFIVSNSLSFPV
QLKWKLSDPQITITSASQLTIQPGARAQKVLFTFKSKKPLSPREMNNLMT
LSGISVRDNQPVLLNGKSSILISPRSPADEEDVQSIPIRISLKVTRFPVN
LKVSNILPYPIIFIGRFLVSSQYTIISRRSYEIPSGESKMVSFFINGPSR
PTKFGLTFDVIPSNRAEDILLISGKRLFVFDEIPKRG

Run BLAST on NCBI

transcript from alignment at sc0000212:328736..336278-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00015545 ID=TCONS_00015545|Name=TCONS_00015545|organism=Clytia hemisphaerica|type=transcript|length=7543bp|location=Sequence derived from alignment at sc0000212:328736..336278- (Clytia hemisphaerica)
CTTGGAGAAACAGATGTTAGAATTCACCAGTTCCAAACCGCTATCAACGG
AAGATTTGAGATCAATGGTTTACTTTGAAGCACGTGCTGATGGTGCATCA
GACTTGACGATTAATGATCAAGACAAGTTTTACGTCACTTTGTCCAGATA
TGATGAAAAACTGGGAAGATTACCAGATGTCTCAAGATTGAACATTTACA
AAAAAGGTGAGATGTTTCACTGTAATCTGTGGTTACACCCCTGTGTCACA
GACCTACTGGGACCCCATCCCCTCAGGAAAATTTGGCAAATATTTCGTCC
CCGGTGGGCAAATAACCTGGAATTTCAGCCCCACTGGCAAATTGACTTTA
AGTTCATCCCCATTCGAAATTCAATGTTTAGAAATTGCACTCTAAAACCA
TCCCCACTGGATTTTTTAACCTTGGAACAATAAAATTTCTAGTCCCATCG
AGACTTCAATAGAAATTTTTGTCCCCACTGAGGAGAAAGTTTCTCCAAGG
CTGTGAGACAGGGATGTGTTGTTCAGACGTTGTGAAATATTTTGTGTTCT
ACATTTGACCTGATATTGCGGTCGTTTTGAAATTTAGAATCTGTTTAAAA
CAGAATTTGCATAAAAGCATTTGATAACCAAAGAATTATTTTTGCTTTTG
GAAATGATTAACAAAGTTATCCCTGTTGCTTTGTTTTTGAAAATATCTTT
TTTTCCTCCTTATAGGTTTTGCAACAAAACGTTACATCAACTTGATTTTC
AACAATGTAGAAAGCTACCCAATCACTGTCTCAAGCAATAAAATCATTTC
TGATGATCTTGTTTACTCAAACAATCCAAAGACTTTCACCGTATACCCAG
GTAAGTTTCCACTTCATGCGATACTTAATTTTCTTTGAGGGATTTCCAAC
ACATAAAGACAATTTTGAATTAATCTTGTGGATTAAGTTTCTATTTCTAC
TAGATGGGGGTAAGTTTATCCAGCCTGAAGGTCCAACTTGGATCATGATA
AGGTTGTTTTACATTTACTTTTCGCAACCGGTGTTTTAAAACTTGTTAAT
TTCGCATAGCGAAGTATTACAATCGGTTTTCTGTTTTCGCGGTAGTGCTA
AAAATTAACACTCTCCACTCGTTCTTCGTGTTCATAATGCTCCACATGTT
CTTCTAGAACTTTCTAGAATATTCTAAAGATGGACTCACGCACAAAGATG
AATAATAGCGTTTCTTTAATAGTTATTCAAGGTGAGTGTAACCAAGGGTT
GGTAAACATTCCTCGTGAAAGCTTTTTAATGGCTGCTTGAAGTTAACACT
TTTGTACACTTTCACTTTGCTGCTGTATGTTTTCTGGTAACTTGTAGAGT
ATTTAAAGAGGTTTATCATTCATTTACTACTTAGTATTTTATGTTTGTGT
AGTTAGTGAATGCACCAATAAACTTTTACAGTGTGTTCAGTTATACAAAT
TAAGAGTTTTTGGATTCTTTTTCACGTCCACAACAACTGACAACAGGCAG
AACCCTAGCAGTACCCTTCAATTACAAAAACGCAGGTATAATATTTTTTT
AGCAATTAGCCATAGGTGTCGATAATGAGATGAATAGAGCTTTTCGCCAT
TGATTTCATTTATATGCAAGCAGCTATTTTTCATACAAATCAGAGATTGC
GAACAGATTTGCATAACTCTCAGGTGCCTAATAAACGTACAGACCAAAAT
AAACGTACAGGGGGGAAATAAAATTGGAATTAATAAACGTACAGGCTGAA
ATAAACGTACAGGCGAGAAATCAGAGCTAAAATAAATAAAGGTAAAGGGA
AAAATCTACCAATTTTTCAAAAGTAGAACATCCAGGTCGAAACGACTGAG
ACTTAAGTATAGGTATATCTCTTATAGATCAATGACAAGTACTACTTCTC
AAAATCTCCCACAATTGACAATACGTTTGAATGTAATTAACAGCCTTTCT
ACACGTCTTACTTAAACAAAAATAACAAATTTTTCCAGTAGTTATGAATC
GGGTCAAAATATTGGGTCAAAATAAATAAACTTACAGGAGGGAATAAACG
TACAGGCGGGAAAATTCTTCAAAATAAATAAACGTACAGGTCCTAATCAG
GTGCGTACAGGCGGGAAATTTGACACGAAAAAAATAAACGTAGACACCTG
AGAGTAATTTTGCATATATATAAATGACGTCATTTTTGAAATATTGAGAT
ATATAAGATATATAATCTTTTTTCAACCTATGATTTGTATGAAAAATGAC
AAGGCAAAAATATGGCTGTGTCAAACAGCCTGTTTTACTACTGTAAATGA
TTTTAGAAGAAATCATTTCAATGATTTTTAGCCCTAAATCATTGATGTTT
GGCAAGTTCAGGCCACAAACTTTTTTTATTTTTGCCTCCGAAAAACTGGG
TCGAGCACGCCCAAAACATGTGAAGGTGAAAATCGTTGGAAAAAGTTATT
GATTGTAACGAGTGGGAGAGCGTTAAATATACCTTTTCCTAGTCAGGATA
NAAAAGTTATTGATTGTAACGAGTGGGAGAGCGTTAAATATACCTTTTGC
TAGTCAGGATGTCCTGTTGAATACTTTATCGGTCAAAACTTAGTCGGCCT
TAATTTTAGTCTGACTTAATTATTAGTCGGTCCTAATTTTAGTCACCTCG
TCAAAATTTAGTCACTAAGGGCCGACTAATAATTAAGTTTTGGCCACTTC
TAAGTTTTTAGTCAGCTCAAATTTTAGTCGGCCCTAATTTTAGTCACCAA
GCCAAAATTAGTGGTCACTTAGGCTAAGTTTTGGCCGATAAGGTAATTTA
AAAACTCCATCACTAAAACAATGACTACATTATAGCACATATAATTACTA
TAATTGTGCGTTAATTTTTCTAATCTTTGTTTTGAGGTTGGTTTTTTTCA
TTATTCGACATCCTGACTAGCAAAAGGTCTATCTGGAATAGACATTTGTT
TCATAGGATGCAATGTCAGGTTGAACAAGACCACAGATTTCTGTAAAGCC
AAAAGGGCTAGATGTTGTTGTGCTTTAAGCTCGTCCAAGCAAAAATAAAG
TGAATATCACAAAAAAATATTGCTGCACTTGTTTTTGAAAACCTGCCAAA
GCTTCTTATTGGTCAAGCGCTGAAATTCTAATGTAATGTCACGTGACCTA
GATGGAATTTCCTACCTAACCTTGACACACTTTTTAGCCAAAGCACGACC
CCTATCATTTTGGGCTAAATCTATGGCTACAACCCTGCCAGCACAGTGGC
CTTAGTGAAACACTGGACACAAAATGGCTGGTGTCAGACAAGAAAACTTT
GCACTACTGGACAATCCTAACACGGGACCAGATGTGAATCCCTCATGTTG
GTGGGTAAAAGAAAAAGTCAGGTGTTTGTTCAGTGTCAAGAATTTGCATA
ATGTAACACTGGATAAACACCAAACATTTTTTAGTGGTGTAATCTGATGG
GTCAAGTTGAACATTTACAAGAATTTTTGTCATTGGATTGGTCGTTAACT
ATTCAAACAAAAACTTTTATTATATTTTTCTAAAGAACGCGTCATCTCTA
TTGTTTTGAATAACCAATTATGTGAGCATCTTGTAAAAACTTCAATACAA
CTGAATCTGATAATACTTTTCAGCATCCAACAGAAGCGGGCAACAGTCTG
GTGCATAGGTAGGGTAGATGAAACTCCAACATCATAACAACAAAATAACA
TAACTAAACTTATTTATAAAATAACATTTTATAAATGAGTGTACTAGATA
TTTTCTTAACATTGTTTTGATGCTGGAGTTAGTGGAGTCTTTAATTGTAT
TCAACTTGACATTGCGTTCTTGAAGGGGCCATCAACAAGCCATTTTTAAT
TCTTAATGGCATTTGGCTGTTAACGGGTGGAGCTTTCATACCCCATATGC
TGCTAAGAAGATTTACAAAGGTCAAAAATGTTTTTTTTTCTATAAGCATG
TATTTTTGATATCCAAACAATGGCTCTATTGTTTAATACAATGCAAACCT
GATATAGGGGTACAGCAGGTGGGAAAAACTGAGTGACAAGTGCTAAATAA
AGACCCTAATTCTGTCTTGGTCAAGCCTTGGTTGAGCTTTTTTAACATGG
TTTTATTCGGTTTAATATTACATCAAGATTTTGGAAAATTTGGGCTTAAA
ACAGCCATAGTCAGTTTATTCTATAAATATAGACTTGGCCTAGGATATAC
TGTATTCTTCTGTATGAAGTCCAGTGTACAATTGCCATCTGTAGAAGCTT
TTTCTACGCTAATAAAAGGGAATCTTGATGATGATTTATGGATAGGATTC
AGGTGTATAATATACTATATGAGAAAATAAAATAGTATCTACGACCTTTG
TGTACAATCTCCTCCAGGCATCACGTTTCACACGTCGTTGTATAGCAGAT
ATCCCCCTGCTTGACCTCGGTATTTTATGGTCAATATTTCTCAATCGTAT
CTCTTTCAAACTTTAAAGGCTCGATGAATTTTCTCCATTTCGTCATGCAG
TGTTTGAATATTATGCGAAATTTTCGACTTCCGAGTCGTCTTGTTTCTGT
ATTGTTACAATCTTAAAAGTAGTTTTAAATGTAAAACAATTTTAAGTAAC
AAAGCTCGTCAATTTCTTCATTTGATTTCTTCATTTGATTATTTTTCAAT
AAGCACAAAACCTCGTTACTTCGTTATCTCCGTTGCAAATTATTTTTAAA
CAGACTTTACATTTTCATCACTACATGTGCTTCAAAACGTGTTTTGTTCG
TTTTAAAAAACTTACACCAAATAAATTTATGAGCTTACAGTTAGTTAGTT
CGTTATCTCGGCTGCAGATTATTTTTAGACAGACTTTACATTTTCATCAC
TACATGTGCTTCAAAACGTGTTTTGTTCGTTTTAAAAAACTTACACCAAA
TAAATTTATGAGCTTACAGTTAGTTAGTTCGTTATCTCGGCTGCAGATTA
TTTTTAGACGGACTTTACATTTTCATCACTACATGTGCTTCAAAACGTGT
TTTGTTCGTTTTAAAAAACTTACACCAAATAAATTTATGAGCTTACAGTT
AGTTAGTTCGTTATCTCGGCTGCAGATTATTTTTAGACAGACTTTACATT
TTCATCACTACAGGTGCTTCAAAACGTGTTTTGTTCGTTTTAAAAAACTT
ACACCAAATAAATTTATGAGCTTACAGTTAGTTAGTTCGTTATCTCGGCT
GCAGATTATTTTTAGACGGACTTTACATTTTCATCACTACATGTGCTTCA
AAACGTGTTTTGTTCGTTTTAAAAAACTTACACCAAATAAATTTATGAGC
TTACAGTTAGTTAGTTCGTTATCTCGGCTGCAGATTATTTTTAGACAGAC
TTTACATTTTCATCACTACAGGTGCTTCAAAACGTGTTTCGTTCGTCTTC
TGGTCATTCAACCTAGATTCGTTGACCACAGATCGCGAAATGACGTCATT
GACAGCCAACGCCCATCAACAACCTATCATGTTGAATGGAAATCGAAAGT
ACTTCTTGAATACAAACAGTTTGCAACGAAAATGTGATAATGATGAATAT
ACACCAATCACATTATCTGCTCCTAAAGGTATGGAAAAATCTTCATTAGT
CTAATGTACATTGTTGTATGTTTTTGTCAACATTTGCACTTGTAAATGTT
CGTTTTAGAAAACTTACACTAAATGAATGTATAATTTTTTGAATGAGCTT
TACTTGTTTTTGGTATAAAGCACTTTGCACAACAGAGATTATCTACACCA
AACAAAAAATTCATTCAATTCCTGACTCATTTACAGTAATTAATTTCCCC
GCTTTAAATCGACATCTATGAAATAATCATTTTGTAATTTATGGAGATCT
TTTTGCCATTCTATGAGCAATTTTTTTTTTGAAGTTGGCGACAGATGTTG
CAGCAACGACATCAACTCCAAGACCATTCCATATGTCAATACTTCTTTGT
AGTTTGTAATCGTGCTGACGTTTCGAGCGCTTGTGAAGGACATTATATAT
ATTGACACCCTCTAACACCATCATTTGCAAATTCTCTTTGTAGTTTGTAA
TCGTGCTGACGTTTCGAGCGCGTGCGAAGGACATTATATATATTGACACC
CTCTAACACCATCATTTGCAAATTCTCTTTGTAGTTTGTAATCGTGATGA
CGTTTCGAGCGCTTGCGAAGGACATTATATATAGAGACAGCATTATCGTC
ATTGCCTTGTCACTGATTCAAAATGATTTCGTTTTCATTTCAGAGTTCAC
TTCGAACGTAGAATTTATCGTCTCCAACAGCCTCTCGTTTCCTGTTCAAC
TAAAATGGAAACTAAGCGATCCACAAATCACAATCACTTCTGCATCTCAA
CTTACCATCCAACCTGGTGCTCGAGCACAAAAAGTTTTATTCACATTCAA
AAGCAAGAAGCCTCTGTCACCAAGAGAAATGAATAATTTGATGACTCTGT
CCGGAATAAGTGTCCGAGATAATCAACCAGTTCTGTTGAACGGGAAGAGT
TCTATTTTAATATCACCACGATCGCCAGCAGATGAAGAGGATGTTCAAAG
TATCCCCATTCGAATCTCTTTGAAAGGTAAGATTACCCAGTAGTAGGGGA
CCAATCCTTAGGATCCGTGACATCTTTTATGTGACGCAACCGCATGTGGT
TAGTTCGAAAGTAGGAAGGTTTTTAAGACTTTTTTGAGAGAGGGCTCGCA
AATTAGGCCCGGCAAAAGTTTTTATGACTAAAAGAGTGACGTTTACAGAC
AAAACTGTAAGGGTAAAAAATGGGTAAAAGATTTACGTTTTTTAAAAGTC
GAATTTGAAAGAAGTGAATGAGACCATCGGAAAGAGCATGAAATTCTGAG
CAAAAAAATATATACTACCTCTTACTCGAACGCACGAAGAAATACGGCCA
TCTAAAGTTTGAAATTCTGTCAGATAGAGTACGATTGACGTCAAATTTTG
TCTAAGCCGTACGGAGTTTGACAGAATTTCGAACTTTAAGTGGCCCCCTA
CTATAGAGAATTAATTACATTTTTATAAGGACCTTGGTGATTTCTACAGA
GCCTGACTTTTATTGAATTTTTGTTATTGGATATATTTGCAATTCGTAAT
CAGATTACTTGTGGCCAAAGTATAGTACTGCTTTCATTCAACGTCAAGAA
ATATTTACTTTCTCAAGTCTTTCTTTATTAACTATAGAGAAATTCAATAT
TTCAGTGAAATATTATTGTGAGAACCGCATAAATACCCTCTTATAAATCT
TCTTGTTCTAGTAACTCGCTTCCCTGTTAATCTCAAAGTCAGCAATATAC
TACCGTATCCAATCATATTCATCGGGCGATTCCTTGTCAGCTCGCAATAC
ACCATCATCAGTCGCCGGTCTTATGAAATTCCCTCAGGAGAATCAAAGAT
GGTGTCGTTCTTCATCAATGGCCCGTCGAGGCCGACCAAGTTCGGCTTGA
CCTTTGATGTTATACCAAGTAACAGGGCTGAAGATATTTTATTGATTAGT
GGAAAGAGGCTATTCGTATTTGATGAAATCCCAAAAAGAGGCG

Coding sequence (CDS) from alignment at sc0000212:328736..336278-

>TCONS_00015545 ID=TCONS_00015545|Name=TCONS_00015545|organism=Clytia hemisphaerica|type=CDS|length=5805bp|location=Sequence derived from alignment at sc0000212:328736..336278- (Clytia hemisphaerica)
TAACTCGCTTCCCTGTTAATCTCAAAGTCAGCAATATACTACCGTATCCA
ATCATATTCATCGGGCGATTCCTTGTCAGCTCGCAATACACCATCATCAG
TCGCCGGTCTTATGAAATTCCCTCAGGAGAATCAAAGATGGTGTCGTTCT
TCATCAATGGCCCGTCGAGGCCGACCAAGTTCGGCTTGACCTTTGATGTT
ATACCAAGTAACAGGGCTGAAGATATTTTATTGATTAGTGGAAAGAGGCT
ATTCGTATTTGATGAAATCCCAAAAAGAGGCAGTTCACTTCGAACGTAGA
ATTTATCGTCTCCAACAGCCTCTCGTTTCCTGTTCAACTAAAATGGAAAC
TAAGCGATCCACAAATCACAATCACTTCTGCATCTCAACTTACCATCCAA
CCTGGTGCTCGAGCACAAAAAGTTTTATTCACATTCAAAAGCAAGAAGCC
TCTGTCACCAAGAGAAATGAATAATTTGATGACTCTGTCCGGAATAAGTG
TCCGAGATAATCAACCAGTTCTGTTGAACGGGAAGAGTTCTATTTTAATA
TCACCACGATCGCCAGCAGATGAAGAGGATGTTCAAAGTATCCCCATTCG
AATCTCTTTGAAAGGTGCTTCAAAACGTGTTTCGTTCGTCTTCTGGTCAT
TCAACCTAGATTCGTTGACCACAGATCGCGAAATGACGTCATTGACAGCC
AACGCCCATCAACAACCTATCATGTTGAATGGAAATCGAAAGTACTTCTT
GAATACAAACAGTTTGCAACGAAAATGTGATAATGATGAATATACACCAA
TCACATTATCTGCTCCTAAAGGTTTTGCAACAAAACGTTACATCAACTTG
ATTTTCAACAATGTAGAAAGCTACCCAATCACTGTCTCAAGCAATAAAAT
CATTTCTGATGATCTTGTTTACTCAAACAATCCAAAGACTTTCACCGTAT
ACCCAGTTGGAGAAACAGATGTTAGAATTCACCAGTTCCAAACCGCTATC
AACGGAAGATTTGAGATCAATGGTTTACTTTGAAGCACGTGCTGATGGTG
CATCAGACTTGACGATTAATGATCAAGACAAGTTTTACGTCACTTTGTCC
AGATATGATGAAAAACTGGGAAGATTACCAGATGTCTCAAGATTGAACAT
TTACAAAAAAGTAACTCGCTTCCCTGTTAATCTCAAAGTCAGCAATATAC
TACCGTATCCAATCATATTCATCGGGCGATTCCTTGTCAGCTCGCAATAC
ACCATCATCAGTCGCCGGTCTTATGAAATTCCCTCAGGAGAATCAAAGAT
GGTGTCGTTCTTCATCAATGGCCCGTCGAGGCCGACCAAGTTCGGCTTGA
CCTTTGATGTTATACCAAGTAACAGGGCTGAAGATATTTTATTGATTAGT
GGAAAGAGGCTATTCGTATTTGATGAAATCCCAAAAAGAGGCAGTTCACT
TCGAACGTAGAATTTATCGTCTCCAACAGCCTCTCGTTTCCTGTTCAACT
AAAATGGAAACTAAGCGATCCACAAATCACAATCACTTCTGCATCTCAAC
TTACCATCCAACCTGGTGCTCGAGCACAAAAAGTTTTATTCACATTCAAA
AGCAAGAAGCCTCTGTCACCAAGAGAAATGAATAATTTGATGACTCTGTC
CGGAATAAGTGTCCGAGATAATCAACCAGTTCTGTTGAACGGGAAGAGTT
CTATTTTAATATCACCACGATCGCCAGCAGATGAAGAGGATGTTCAAAGT
ATCCCCATTCGAATCTCTTTGAAAGGTGCTTCAAAACGTGTTTCGTTCGT
CTTCTGGTCATTCAACCTAGATTCGTTGACCACAGATCGCGAAATGACGT
CATTGACAGCCAACGCCCATCAACAACCTATCATGTTGAATGGAAATCGA
AAGTACTTCTTGAATACAAACAGTTTGCAACGAAAATGTGATAATGATGA
ATATACACCAATCACATTATCTGCTCCTAAAGGTTTTGCAACAAAACGTT
ACATCAACTTGATTTTCAACAATGTAGAAAGCTACCCAATCACTGTCTCA
AGCAATAAAATCATTTCTGATGATCTTGTTTACTCAAACAATCCAAAGAC
TTTCACCGTATACCCAGTTGGAGAAACAGATGTTAGAATTCACCAGTTCC
AAACCGCTATCAACGGAAGATTTGAGATCAATGGTTTACTTTGAAGCACG
TGCTGATGGTGCATCAGACTTGACGATTAATGATCAAGACAAGTTTTACG
TCACTTTGTCCAGATATGATGAAAAACTGGGAAGATTACCAGATGTCTCA
AGATTGAACATTTACAAAAAAGTAACTCGCTTCCCTGTTAATCTCAAAGT
CAGCAATATACTACCGTATCCAATCATATTCATCGGGCGATTCCTTGTCA
GCTCGCAATACACCATCATCAGTCGCCGGTCTTATGAAATTCCCTCAGGA
GAATCAAAGATGGTGTCGTTCTTCATCAATGGCCCGTCGAGGCCGACCAA
GTTCGGCTTGACCTTTGATGTTATACCAAGTAACAGGGCTGAAGATATTT
TATTGATTAGTGGAAAGAGGCTATTCGTATTTGATGAAATCCCAAAAAGA
GGCAGTTCACTTCGAACGTAGAATTTATCGTCTCCAACAGCCTCTCGTTT
CCTGTTCAACTAAAATGGAAACTAAGCGATCCACAAATCACAATCACTTC
TGCATCTCAACTTACCATCCAACCTGGTGCTCGAGCACAAAAAGTTTTAT
TCACATTCAAAAGCAAGAAGCCTCTGTCACCAAGAGAAATGAATAATTTG
ATGACTCTGTCCGGAATAAGTGTCCGAGATAATCAACCAGTTCTGTTGAA
CGGGAAGAGTTCTATTTTAATATCACCACGATCGCCAGCAGATGAAGAGG
ATGTTCAAAGTATCCCCATTCGAATCTCTTTGAAAGGTGCTTCAAAACGT
GTTTCGTTCGTCTTCTGGTCATTCAACCTAGATTCGTTGACCACAGATCG
CGAAATGACGTCATTGACAGCCAACGCCCATCAACAACCTATCATGTTGA
ATGGAAATCGAAAGTACTTCTTGAATACAAACAGTTTGCAACGAAAATGT
GATAATGATGAATATACACCAATCACATTATCTGCTCCTAAAGGTTTTGC
AACAAAACGTTACATCAACTTGATTTTCAACAATGTAGAAAGCTACCCAA
TCACTGTCTCAAGCAATAAAATCATTTCTGATGATCTTGTTTACTCAAAC
AATCCAAAGACTTTCACCGTATACCCAGTTGGAGAAACAGATGTTAGAAT
TCACCAGTTCCAAACCGCTATCAACGGAAGATTTGAGATCAATGGTTTAC
TTTGAAGCACGTGCTGATGGTGCATCAGACTTGACGATTAATGATCAAGA
CAAGTTTTACGTCACTTTGTCCAGATATGATGAAAAACTGGGAAGATTAC
CAGATGTCTCAAGATTGAACATTTACAAAAAAGTAACTCGCTTCCCTGTT
AATCTCAAAGTCAGCAATATACTACCGTATCCAATCATATTCATCGGGCG
ATTCCTTGTCAGCTCGCAATACACCATCATCAGTCGCCGGTCTTATGAAA
TTCCCTCAGGAGAATCAAAGATGGTGTCGTTCTTCATCAATGGCCCGTCG
AGGCCGACCAAGTTCGGCTTGACCTTTGATGTTATACCAAGTAACAGGGC
TGAAGATATTTTATTGATTAGTGGAAAGAGGCTATTCGTATTTGATGAAA
TCCCAAAAAGAGGCAGTTCACTTCGAACGTAGAATTTATCGTCTCCAACA
GCCTCTCGTTTCCTGTTCAACTAAAATGGAAACTAAGCGATCCACAAATC
ACAATCACTTCTGCATCTCAACTTACCATCCAACCTGGTGCTCGAGCACA
AAAAGTTTTATTCACATTCAAAAGCAAGAAGCCTCTGTCACCAAGAGAAA
TGAATAATTTGATGACTCTGTCCGGAATAAGTGTCCGAGATAATCAACCA
GTTCTGTTGAACGGGAAGAGTTCTATTTTAATATCACCACGATCGCCAGC
AGATGAAGAGGATGTTCAAAGTATCCCCATTCGAATCTCTTTGAAAGGTG
CTTCAAAACGTGTTTCGTTCGTCTTCTGGTCATTCAACCTAGATTCGTTG
ACCACAGATCGCGAAATGACGTCATTGACAGCCAACGCCCATCAACAACC
TATCATGTTGAATGGAAATCGAAAGTACTTCTTGAATACAAACAGTTTGC
AACGAAAATGTGATAATGATGAATATACACCAATCACATTATCTGCTCCT
AAAGGTTTTGCAACAAAACGTTACATCAACTTGATTTTCAACAATGTAGA
AAGCTACCCAATCACTGTCTCAAGCAATAAAATCATTTCTGATGATCTTG
TTTACTCAAACAATCCAAAGACTTTCACCGTATACCCAGTTGGAGAAACA
GATGTTAGAATTCACCAGTTCCAAACCGCTATCAACGGAAGATTTGAGAT
CAATGGTTTACTTTGAAGCACGTGCTGATGGTGCATCAGACTTGACGATT
AATGATCAAGACAAGTTTTACGTCACTTTGTCCAGATATGATGAAAAACT
GGGAAGATTACCAGATGTCTCAAGATTGAACATTTACAAAAAAGTAACTC
GCTTCCCTGTTAATCTCAAAGTCAGCAATATACTACCGTATCCAATCATA
TTCATCGGGCGATTCCTTGTCAGCTCGCAATACACCATCATCAGTCGCCG
GTCTTATGAAATTCCCTCAGGAGAATCAAAGATGGTGTCGTTCTTCATCA
ATGGCCCGTCGAGGCCGACCAAGTTCGGCTTGACCTTTGATGTTATACCA
AGTAACAGGGCTGAAGATATTTTATTGATTAGTGGAAAGAGGCTATTCGT
ATTTGATGAAATCCCAAAAAGAGGCAGTTCACTTCGAACGTAGAATTTAT
CGTCTCCAACAGCCTCTCGTTTCCTGTTCAACTAAAATGGAAACTAAGCG
ATCCACAAATCACAATCACTTCTGCATCTCAACTTACCATCCAACCTGGT
GCTCGAGCACAAAAAGTTTTATTCACATTCAAAAGCAAGAAGCCTCTGTC
ACCAAGAGAAATGAATAATTTGATGACTCTGTCCGGAATAAGTGTCCGAG
ATAATCAACCAGTTCTGTTGAACGGGAAGAGTTCTATTTTAATATCACCA
CGATCGCCAGCAGATGAAGAGGATGTTCAAAGTATCCCCATTCGAATCTC
TTTGAAAGGTGCTTCAAAACGTGTTTCGTTCGTCTTCTGGTCATTCAACC
TAGATTCGTTGACCACAGATCGCGAAATGACGTCATTGACAGCCAACGCC
CATCAACAACCTATCATGTTGAATGGAAATCGAAAGTACTTCTTGAATAC
AAACAGTTTGCAACGAAAATGTGATAATGATGAATATACACCAATCACAT
TATCTGCTCCTAAAGGTTTTGCAACAAAACGTTACATCAACTTGATTTTC
AACAATGTAGAAAGCTACCCAATCACTGTCTCAAGCAATAAAATCATTTC
TGATGATCTTGTTTACTCAAACAATCCAAAGACTTTCACCGTATACCCAG
TTGGAGAAACAGATGTTAGAATTCACCAGTTCCAAACCGCTATCAACGGA
AGATTTGAGATCAATGGTTTACTTTGAAGCACGTGCTGATGGTGCATCAG
ACTTGACGATTAATGATCAAGACAAGTTTTACGTCACTTTGTCCAGATAT
GATGAAAAACTGGGAAGATTACCAGATGTCTCAAGATTGAACATTTACAA
AAAAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_008672	XLOC_008672	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00015545-protein	TCONS_00015545-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000212	supercontig	sc0000212:328736..336278 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.356157	0.0725291	0.12632	0.0823895	0.823053	1.32157	1.27261	2.1009	0.590493	0.786456	0.59682	0.773098	0.826452	1.15173	0.549037	0.948824	0.342288	0.38156	0.772513	1.23569	1.3077	1.31535	0.429409	1.18381	1.68222	1.28284	2.48608	1.90488	1.19996	1.42105

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR013783	Ig-like_fold

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00015545 vs. Swiss-Prot (Human)

BLAST of TCONS_00015545 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00015545 (transcript) - C. hemisphaerica