TCONS_00015511 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015511
Unique NameTCONS_00015511
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2643

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015511 ID=TCONS_00015511|Name=TCONS_00015511|organism=Clytia hemisphaerica|type=transcript|length=2643bp
CCATagcaaatgatttaaaaaacatttttgttggaaattgaGCAAAATAC
AAGAAATCACAACCACACACGTGGCAATGAGCTCAGACATTCTTCGACAC
GTGACCAAAGATGGTAGCAGTGGATTCAAAGTAGAAAAAGACCGATATCA
TTTGTATGTAGCTCATGGATGTCCATTTGCTCACAGAACCATCATTGGGC
GTAAAATAAAAGGGCTTGAAAATATCATAACAATGGATTACATCGACAGT
TTAAGGGAGGATGCTGGGAAGAGTTTCAACTTTTCACCGGAACACCCGGA
TACTATCAACGGAAAAGAGTACTTATCGGAAGTGTACTTGTTATCACATC
CTGATTACACCGGTCGATGCACTGTTCCGGTGCTATTTGATAAGCAAACC
AAGAAGATAGTGTCGAATAGTTCAGCAGAAATTTTGAAGATGTTGAACAG
TgaatttgaagagttgtcaacGACGGATGTTGATCTGTATCCTGAGGAAT
TGAAGAAGGAAATTGATGATTTGAACGAATGGATCACACCAGGGATCGCT
GGAGCAGTGTATCGTGTTGGTTTTGCGCAACTAGCTCACAATCAAGAact
ctatgataaagaagttgAAGCGTTATTCCACAACCTTGACAAGGTTGATG
AACTATTGGAGACCAAACGATATTTAACTGGTCCACAATTAACTGATGCT
GACATTCGACTCATCGTTGTCCTGTTACGTTTTGATTCTGTTTATTATTC
GCTTTTCAAGtgttgCAAACGCACTTTGGTCTCGTACAAGAACTTATGGC
CCTACCTTCGAGATGTTTATCAGACTTTTGGTTTAGCCTCAATCAACAAC
ATggctgaaataaagaaaatgtatTTCAGATCGCCAAAATTTGCTTCGTT
TGATGGAGTTGTTCCTGTGGGTCCAGAGCTTGACTTCAATGAGCCACACG
GAAGAGAAGGAAAGTAAAGATTGCTTTTTGAGTGTGGAAAATCTAGACAA
GAAGAAAGAGGCCATCATCATGGAGTTCTTGTCGAAAGTTGTTCTATTAT
GTGCTGTAACGACCGTGTTTTCCGGTGATGGATTGTTTTCACCGTGTAGC
TCAACAGCACCTACCAAGAGTCTTTTTGAATACAAGAGCACTTTATTGAA
CGGAGAAGAGAAAGATTTTAATGATTATGCAGgTCACGTGACAATTGCTG
CCAACTTGGCATCTTTCTGAGGGTTAACCAACATGACCTATCATTACTTA
AATGCACTCCAAGAGAAGTATGGTGGAAATAGCCAATGTTCTCTTAAAGT
ACTTGGCTTCCCTTGTGGCCAGTTTTACAACCAAGAACCAGGATCAAATG
CAGAGATTCCCAACCTTTTGCGTTATGTTCGCCCTGGTAATGGCTTCATT
CCAAATTTTAACATGTTTAACAAAATTGAGGTGAACGGAGCTAAAGAAGA
CCCTATCTTTACCATGTTAAAGgGTCAATGTCCACGTCCGAACAACGTGA
TTGCTGATTTTCTAATGGCTGTTTCATGGCGACCCATACGCACGTATGAT
ATCCACTGGAATTTCGAGAAGTTCTTGGTTGATCATAAGGGACAGCCTTT
GTATCGTTACGCTGAACCTAATACAACTTATGTAACCATTGAAAAACATA
TAGAAGCAGCAATTCAAGAATGCCAATCTGAATCGAATGCGGACTATTAT
GTCAATAAGGTTCAAAATCTATGGAAATAGGTACATACttagaccattga
gtttcaggcccgaagggctagaagcgaaattttaacccttctcaggcaag
agaaattgaagccacttatttcccatctaaaacGCGCagagaacgcgccg
taatcatgccgacggattgtatctagtggttcctttgttttggaggacta
cattttttgaaatctagcgatatattttagtttcaatccggtgtttgtgt
aaaaactacgcacGGAcgtcctggatgggaaataagtggtttcatttccc
atacaggagtttcgcctctagcccgtCGGGCTTGAAATTCAATGACTTAG
ACTTGTGCTACGCCCTGGCGCCCACGGGTGATTTCTGCTTTTTGAAGAAC
TCTTTAATTCACATTCCAAACATGAAttaataaatgattttttaattaac
agagaatttcgaaatttttattgGGAGAGTATAAAGTAAGCCTACTGTTT
ccaatttgtttttcaaataagaAAACTTTCTGTATTTTGATTAAAACTTT
AAAAGGAGACGTAACAGTCAAAATATTCGAACGTATTTAACAGACATgat
aaacttttattttaaaagagaaaatattacattctattatatttcaaatt
tttgatattattttctttgaaactaTTTTTCGCATGATGATAGGAAATCC
AATTACAATTTTTTGTAGCATTTCTTCTATCGGATATAGTTGTACCTTTT
TATGctgatttttttatctttgaaaattttgtatttgtgcatttttacag
aattttttACTGAAAAGAATTGGTATATTTTGAGTACGATTTGGAAAAGA
CAAGAATTATGAATTTGAAggatttgtctttttttactcGTGTAGGGGAG
CAAAATGACTTCCCAAACTGAAATGACAAGTAATATATAAAAT
Run BLAST on NCBI

transcript from alignment at sc0000212:208037..218456+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015511 ID=TCONS_00015511|Name=TCONS_00015511|organism=Clytia hemisphaerica|type=transcript|length=10420bp|location=Sequence derived from alignment at sc0000212:208037..218456+ (Clytia hemisphaerica)
CCATagcaaatgatttaaaaaacatttttgttggaaattgaGCAAAATAC
AAGAAATCACAACCACACACGTGGCAATGAGCTCAGACATTCTTCGACAC
GTGACCAAAGATGGTAGCAGTGGATTCAAAGTAGAAAAAGACCGATATCA
TTTGTATGTAGCTCATGGATGTCCATTTGCTCACAGGTTCGTGCGGAGAA
GTAaagtaaaaaagatgtcacggaaccccaggattggccccctactatta
gTAACCTACTTGTACCGTCGCTAATATAATTCAATAAGATAAGATTTGGG
GTGATTAAGTTTCACTGTGCTAAGTATTGGTTTAAGATATCAGTGTTTTT
AGATTACATAAGCCTAAAAGGTTGGATCTTTGTAGAGCAGATATATGGGA
GCAGAAACTGATAACTTTTTATGACTCtgtaaatttaaaatgaaagataa
aGTTTCCGTTTTTCTGGACTagcttggattttttttcatttttgttcttC
TTATCATTTAGAACCATCATTGGGCGTAAAATAAAAGGGCTTGAAAATAT
CATAACAATGGATTACATCGACAGTTTAAGGGAGGATGCTGGGAAGAGTT
TCAACTTTTCACCGGAACACCCGGATACTATCAACGGAAAAGAGTACTTA
TCGGAAGTGTACTTGTTATCACATCCTGATTACACCGGTCGATGCACTGT
TCCGGTGCTATTTGATAAGCAAACCAAGAAGATAGTGTCGAATAGTTCAG
CAGAAATTTTGAAGATGTTGAACAGTgaatttgaagagttgtcaacGACG
GATGTTGATCTGTATCCTGAGGAATTGAAGAAGGAAATTGATGATTTGAA
CGAATGGATCACACCGTAAGATAATTCTATTCTCCCAGAAACCTCTGCTT
AAAAATATCGATTGAGTAATCCTAAAATCATTTTACTAAGTAGATTTTTT
AGTTAAGAAATGCTGGACTCACTCAAAACTTAGTTTAACGATTTTTATGA
TCTACACACAAATCTACTTTATTCAATTTTAATGGTTTAATGAAAagcag
ggctcgaaataacggtcggacatcggacattgtccgacccaaatggcttc
atgtccgacccaaaaatcataattttcaagcaaaagcaaccctgatcgga
cattttgtccgacccacttgaaatcgttatttcgagccttggAAAAGGGA
ATCgatcagcaaaaaaattttaaatggaCTTTGTTTTCGATGCCGATTCG
CTTGTCTTAAAAAATATTCCGAGGATGTATACAGTATAATTAAATGATAT
TAGCTTCACTTTCACCTAGAGGGATCGCTGGAGCAGTGTATCGTGTTGGT
TTTGCGCAACTAGCTCACAATCAAGAactctatgataaagaagttgAAGC
GTTATTCCACAACCTTGACAAGGTAACTGGCTCATTCGAACACGAAAATG
AAAGCAAATACGGATGCAACCGGGCTCTATTGTATCATTTTTGATTGCTA
TTGATTTTACGCTATTGTTTTATTACTTCAACCAAAAACAGCGCTCTTAA
GctcaaaacttcaaaaagcgGACCGCCGAGGGCAAATCCTGTAACGAAGG
GTCAGTAGCAGACGACTACTTAATGACTACTTCTCGGAGATTAGCCTATT
TCAATGGATTCATGTTTTAATTATATGATATTTTTCTACGTCATTCCAGT
AATCAACTTTTGTGTTTGAGCACCCGTTTAAATTGAGAAAAGCAAAAAAC
AATGCGAAAGAATTCTTGAATTCCCAAGTCAATTGAATGATGACagaaaa
gcaattttttcaaagtttttctttccaTCGGGAAATCTGCacaacacccc
ccccccttgaatCGAATAGGAAATAACATATATAGCAGATGCACggatcc
tatgaaataggctaatatTCCTTTTTTATACCTGACTTCCAAAGCATTAA
TGACGCAACCAACTTTAATCTGACTAAACCAGTGAAGATATGCACCCCGT
ACTtaatatttttaccatttttcccTTTCTTTGTATTACAACAGGTTGAT
GAACTATTGGAGACCAAACGATATTTAACTGGTCCACAATTAACTGATGC
TGACATTCGACTCATCGTTGTCCTGTTACGTTTTGATTCTGTTTATTATT
CGCTTTTCAAGGTATGTTTGCTTGAATTTGAATGTGGTTGCTTTCCAGAA
TCTGCTAAGAGTCCGGAGTCATGCTAAGTTTTCCTCGAAAGGGGAACCCG
GATAAAATCGGTACTAGATATGTGCAAGCGGTACCTTTTTTGTCTCGAAA
ATTTCTTGAAGAGTTACAAATTCCGAACCATTCTCTGAAAGGGTCTCAAA
GTCGAAAGGAAATTTGGGGAAAAACTTCTATAAGGATAGTTTCGTATAAA
TATCCCGTTTTTCTTGCTTTCTTctatcttcatcaaaattaacaAAGAAA
GTTCTAATAAGGGTCCCTAAAAATCCCTCCATCTGTACGGGCCAATTTCG
ATTTTGGGCTCTGACCTACCCGTCACCCgtatatttttcgtgtttttttt
ttcagtgttgCAAACGCACTTTGGTCTCGTACAAGAACTTATGGCCCTAC
CTTCGAGATGTTTATCAGACTTTTGGTTTAGCCTCAATCAACAACATggc
tgaaataaagaaaatgtatTTCAGATCGCCAAAATTTGCTTCGGTAAGAA
ACACGAAAAGAGGAAttgtaaacattgaaaaaaaacttttcgaaagCGCA
TTCGGCAATATGCAATATATCCACTTTTTTTCCTCAATCGAATGCGAGGA
AGACAGATGCGGTATCCCACTTCCACGCGATGTCTTTTATAGACCAATGA
AATCGctagaatcttactgatgcTGGATAATACATTATACCTTCGCTAAG
ACATGTCGATTTAGAGTACACTAGGCTGGAGATATTTTCCTTTACCGTTT
TGAAATATATAAACTTTTGTCATCATCTTTCAGTTTGATGGAGTTGTTCC
TGTGGGTCCAGAGCTTGACTTCAATGAGCCACACGGAAGAGAAGGAAAGT
AAAGATTGCTTTTTGAGTGGTATGAAATTGTATAAATTagaatttagttt
tcatttacatattttattaaattgtATGGCATCATTGCTTTATTTTTCTG
CACATAAATGCACTTGCACATTTGAAACTTCGTCATTGAAAATTTAATCG
TAATGAAACAACATTACTACTTGGTCAATTTCCACATTTTTATCACAAAT
TATGTATTTTATGCAGGCTCTGCTTGCAAATCTAATTAAAGGTACGACAC
TGCGTTATGATTTATATCATCTCCGACGGAGATCATTTAGTATCTTTCTA
CTGTATCGTTTGACAGAAAAAAACGCTTCCCCGGAGAGTTGTTAAGGGAT
CCACGTGAGTTGATCATGTGGTTTTAGCCCTCTAAAAGGAAATTTGATAA
CATTATATAAATGAGAGCTCTTAACATTGTTGCATGAACGGGCAGATGCA
AAAATATCAATCATTATAAAATCAATACGACTCCCTTATTTCGAATTCAT
AAGTGGAAAATCTAGACAAGAAGAAAGAGGCCATCATCATGGAGTTCTTG
TCGAAAGTTGTTCTATTATGTGCTGTAACGACCGTGTTTTCCGGTGATGG
ATTGTTTTCACCGTGTAGCTCAACAGCACCTACCAAGAGTCTTTTTGAAT
ACAAGAGCACTTTATTGAACGGAGAAGAGAAAGATTTTAATGATTATGCA
GGTaggattttcaatatttttgtgttGAACTATCATCTGACGTCTTGtat
ccatttttattttttcctgttTTCGCACACCTTGTGAAACGGCATTTCGT
CCGATCTCAAGATCTAAACTTCTGACTAtttgaatttcaagaaaaaaaga
attctaCTGAATTGCTGTACCTGTGAAACAGAGGGAACAGCTTTCCAACG
CTGTCATGGTTCATACCTAAAACTTGCTCACTCAATCATAAGTTGATGAC
TCTGGAATCAAAAGGCTTAActgttgttctttttttaggTCACGTGACAA
TTGCTGCCAACTTGGCATCTTTCTGAGGGTTAACCAACATGACCTATCAT
TACTTAAATGCACTCCAAGAGAAGTATGGTGGAAATAGCCAATGTTCTCT
TAAAGTACTTGGCTTCCCTTGTGGCCAGGTAAACGTTTTCCCTTGTATTa
caaattatgattttcattttggatTCAACGACATTGTAAATCTTCAGGTC
TAGCAAGCATGTAATTTTGTCGGGGGAAGCTTAATTCTAGAATTCGTCAG
AGATGGGGTTTTATACTCTGATAATTGGTCATtcgaagtaataaaaatga
cgcgttctttagaaaaagtaacaaaattgcttggttaacgaccaaccaaa
tcaaataagagcttgtaaaaactccatcttgtCCTGAATTCAGGTTGCAT
TGACGGTAGCACTTgaaatttcttctcgcaaaaACAACATTATTCCAAAG
GATCCTTTTCACTATCTAAAGAAAgtgagaaaaatacaaaaacgatGACA
TCAATTCAACCATTTTTGACGACCATATTCTACAGACATAAATGGAATAA
ACACTTTCACATAGCCGACCATGCATTTCCTCAATGCAAAGTGCTCGGCC
CTgctgttttttcttttgacagGTTTAAAGTTTTAATCGTTAATTAACCA
TTGTTTTGTGATCTTTTTGTTACTTTAGTTTTACAACCAAGAACCAGGAT
CAAATGCAGAGATTCCCAACCTTTTGCGTTATGTTCGCCCTGGTAATGGC
TTCATTCCAAATTTTAACATGTTTAACAAAATTGAGGTGAACGGAGCTAA
AGAAGACCCTATCTTTACCATGTTAAAGGTAATGTTTTATATGTTGTTGA
AGTGCTCTCGGCAAAAACCGATTCAATAAAGAAAATTGGTGTGAAATTCG
GGTCGGTTCGGGCCGTTTTGAAATTTGAGGTCGAAATTCTTTTCGCTCAT
GTGTTCTGATCACATGATTAGAAAATGATCGATGGAGAGTTGTCGATAGT
TTGGGGAGGTCAAACATTTTcctaaaactttaaaaataacaCAAACAAAA
CCAGCtagcaaaaagttttaaaatcgcGTAAAATTGTGCTATCATTCCTG
ATGTAGAATCTTCCAACTGACTCGTTTTGGAGTTTTTTTCAATGACCTAA
ATAAAAATCTGTCCTGTATAACAGGGTCACGTGTATAACTGCCAACTACA
CTTAATTTCATTCAAATGTCAATTTCGAACGTCTGTAATAAGATACATAC
ACGTCTTATCGAGCATGTTGTTTATTTTGTGTCAAACTGTTTATTTGTAC
TAGATGGCATTAAGCAATATTTGGATAAGTTCTCAAGGTTTTATGTTACG
TAAATCAAAACTCTGGCCATCAATTATTATGGTACCAATAAATTTATTAT
GCAACAACTTAAATCTAAACAGAGGACTAGAGCGAGATTTTATATTTTGT
CTTTAAAATAGCGAGATTCGAATTCATCTTTGTGTTGCTATCAATTAATC
TACCAACTCAACCATAAAGGTGACTTTTTAGGGGACAGTGTCGAGTTTGT
GACACAACAATTCTAGAAACCACAAGTGTggtagtctggagatccatact
ctctaacCAAGACAAACACCACCCAAACAGATATCCCATCAGAAGCTGCT
CATTGATAGTATAATATTTtatgacccagtttgaatttgttaaaGGGata
taacagtacttgcgaaattagtaaacaaactgtatgcagcggatacaaaa
tcaaaacaaatgtcacatgtcaaaataaaaaatcaaaccaaatatagCTA
ATAttaattgttcaattgttttacaagtttgttttggacacgttatttaa
attgttctctttaatgacacttggttcgcgcaatgtttacattttactac
tttaatgtccctttaaatttCCGTCGATAGGTAGTCAATCAGATTCGCAC
ATTTAAACCAAAAATTAGTATCACGTGATATCAGTCAACAGTCAACAGTC
AACAGTCAATAAAATTCTGCGCCAGGATCCTGTagtattttcaaagacat
tccCAGGCTTGAAATACCTTGGCTGTTTCCTAAATTCTAAAAAGCTTTTC
TCCTGGAAATTATGAGCAGgtcaaaaacataccgacgtcagcacgatcaa
gacaagatttgacgtcaaaatcacATTAGAGCTGACAAAATTAGTTGATC
TTAAAGcagctgtatttctttgtgtgttttagtcagagagttgttgtaat
acaattctttgctcagaatttcatgctctatcagatggtaccaatcattt
tagtttattttgacttttgaaaataaactatttctctaccccttattttc
tcttgcagttttgcctatggcattactattttggtcacaaaaaaattttc
cggacCTTATAAATTTGACTCttctcaaaaaattataattatataGAACT
ATAATAAACTTTGAAATGGAACAGGTTTCGTTTAGTCCTATAAAAATTGC
CACGGGACCGGAGACTTGGCCCCTTACTATTAGTTAGATTTTACAATTCT
ATTTTCTATTACACAATCAGCTGGAAATGATAATATTTTGTAAGCTCTCC
TGACTGACCAAAcagaataaaaaaagattttctcaaaatttatgctAAAG
TGGTGcgggaaatgaaaaaaaaattctaccttTTGTTTACGAATACTGTG
Ttagcaaatggtaggagatcactgacctttatataccctggaccaatcct
agcccggggtccacttaaagctttttttatagactggatggcgcgattaa
gtggcccggtagtatatggtattATGCTTTTGCtaaggcggactgtaaaa
cagtccgccagatttttgttgtttttggaaggtaaaaacagtatgaagca
atgtttttatttgagaataagggattgcgaATCTGTTATTGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNactgatttttgcgacc
agaactttctattaatttttccctacaacccttccctctccccccatcaa
caatcaatgatgaatttattgcgttgtgTATTTTtgctaaatgctatatt
ttctgaccgatttttttcatttttcttttcgcattgctaactaactttca
tcatcaggtaggtccattcagcatgttgcttgttgattatatctttcaac
tccaagtagttttattgttatttggatttttaacatttttttcaaaatgg
cgacctcgccaagcgctcctagtctacttcactggactcagcgtcataaa
aaattatcaaaaagcaaagttcagccaaaagtagactctagtctagacCA
ATCCGGGCCAattaaaaagagttttttgaaaagtaccctaatggcggcac
tactcaatagcggtgtaaatgcatcgagagcgctagatctactttccctc
ggaaacttttgatgatgtagcgccgctagacgttaatttttaacactgca
atggcttctttacgggtgcCAATAGCCATAGCTTGGTCTTGGTCATAGCT
TGGTctagggatatataaaggtcagtgtagGAGATACGTTAAATTATTCT
TGTAATGAATATGAATATGATTGAGATGTATTTCCATACCAACACAAATA
AGTTTAGAGCATTGAAGGAATACAAATTTAGTGATACCTTGTCTCATTGG
AGCCTCACATTTACAATGAAGTAAAGTAGactgtttttcactttttcagg
GTCAATGTCCACGTCCGAACAACGTGATTGCTGATTTTCTAATGGCTGTT
TCATGGCGACCCATACGCACGTATGATATCCACTGGAATTTCGAGAAGTT
CTTGGTTGATCATAAGGGACAGCCTTTGTATCGTTACGCTGAACCTAATA
CAACTTATGTAACCATTGAAAAACATATAGAAGCAGCAATTCAAGAATGC
CAATCTGAATCGAATGCGGACTATTATGTCAATAAGGTTCAAAATCTATG
GAAATAGGTACATACttagaccattgagtttcaggcccgaagggctagaa
gcgaaattttaacccttctcaggcaagagaaattgaagccacttatttcc
catctaaaacGCGCagagaacgcgccgtaatcatgccgacggattgtatc
tagtggttcctttgttttggaggactacattttttgaaatctagcgatat
attttagtttcaatccggtgtttgtgtaaaaactacgcacGGAcgtcctg
gatgggaaataagtggtttcatttcccatacaggagtttcgcctctagcc
cgtCGGGCTTGAAATTCAATGACTTAGACTTGTGCTACGCCCTGGCGCCC
ACGGGTGATTTCTGCTTTTTGAAGAACTCTTTAATTCACATTCCAAACAT
GAAttaataaatgattttttaattaacagagaatttcgaaatttttattg
GGAGAGTATAAAGTAAGCCTACTGTTTccaatttgtttttcaaataagaA
AACTTTCTGTATTTTGATTAAAACTTTAAAAGGAGACGTAACAGTCAAAA
TATTCGAACGTATTTAACAGACATgataaacttttattttaaaagagaaa
atattacattctattatatttcaaatttttgatattattttctttgaaac
taTTTTTCGCATGATGATAGGAAATCCAATTACAATTTTTTGTAGCATTT
CTTCTATCGGATATAGTTGTACCTTTTTATGctgatttttttatctttga
aaattttgtatttgtgcatttttacagaattttttACTGAAAAGAATTGG
TATATTTTGAGTACGATTTGGAAAAGACAAGAATTATGAATTTGAAggat
ttgtctttttttactcGTGTAGGGGAGCAAAATGACTTCCCAAACTGAAA
TGACAAGTAATATATAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008656XLOC_008656Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015511-exon-sc0000212-1491911889:208037..208222TCONS_00015511-exon-sc0000212-1491911889:208037..208222Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1510915933:208037..208222TCONS_00015511-exon-sc0000212-1510915933:208037..208222Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1575043694:208037..208222TCONS_00015511-exon-sc0000212-1575043694:208037..208222Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1491911889:208548..208901TCONS_00015511-exon-sc0000212-1491911889:208548..208901Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1510915933:208548..208901TCONS_00015511-exon-sc0000212-1510915933:208548..208901Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1575043694:208548..208901TCONS_00015511-exon-sc0000212-1575043694:208548..208901Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1491911889:209356..209458TCONS_00015511-exon-sc0000212-1491911889:209356..209458Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1510915933:209356..209458TCONS_00015511-exon-sc0000212-1510915933:209356..209458Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1575043694:209356..209458TCONS_00015511-exon-sc0000212-1575043694:209356..209458Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1491911889:210081..210197TCONS_00015511-exon-sc0000212-1491911889:210081..210197Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1510915933:210081..210197TCONS_00015511-exon-sc0000212-1510915933:210081..210197Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1575043694:210081..210197TCONS_00015511-exon-sc0000212-1575043694:210081..210197Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1491911889:210592..210729TCONS_00015511-exon-sc0000212-1491911889:210592..210729Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1510915933:210592..210729TCONS_00015511-exon-sc0000212-1510915933:210592..210729Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1575043694:210592..210729TCONS_00015511-exon-sc0000212-1575043694:210592..210729Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1491911889:211020..211105TCONS_00015511-exon-sc0000212-1491911889:211020..211105Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1510915933:211020..211105TCONS_00015511-exon-sc0000212-1510915933:211020..211105Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1575043694:211020..211105TCONS_00015511-exon-sc0000212-1575043694:211020..211105Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1491911889:211590..211787TCONS_00015511-exon-sc0000212-1491911889:211590..211787Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1510915933:211590..211787TCONS_00015511-exon-sc0000212-1510915933:211590..211787Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1575043694:211590..211787TCONS_00015511-exon-sc0000212-1575043694:211590..211787Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1491911889:212075..212214TCONS_00015511-exon-sc0000212-1491911889:212075..212214Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1510915933:212075..212214TCONS_00015511-exon-sc0000212-1510915933:212075..212214Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1575043694:212075..212214TCONS_00015511-exon-sc0000212-1575043694:212075..212214Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1491911889:212765..212914TCONS_00015511-exon-sc0000212-1491911889:212765..212914Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1510915933:212765..212914TCONS_00015511-exon-sc0000212-1510915933:212765..212914Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1575043694:212765..212914TCONS_00015511-exon-sc0000212-1575043694:212765..212914Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1491911889:217286..218456TCONS_00015511-exon-sc0000212-1491911889:217286..218456Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1510915933:217286..218456TCONS_00015511-exon-sc0000212-1510915933:217286..218456Clytia hemisphaericaexon
TCONS_00015511-exon-sc0000212-1575043694:217286..218456TCONS_00015511-exon-sc0000212-1575043694:217286..218456Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000212supercontigsc0000212:208037..218456 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.617365	0	0	0.619141	0.298726	1.44153	0.602788	2.27936	0.748433	1.98409	4.22373	18.268	17.8814	23.4637	31.8189	24.0351	38.861	8.15835	6.1909	33.865	32.408	48.873	48.0473	18.7926	11.0129	82.794	144.271	395.228	281.554
Blast
[Close]
BLAST of TCONS_00015511 vs. Swiss-Prot (Human)
Match: GPX5 (Epididymal secretory glutathione peroxidase OS=Homo sapiens GN=GPX5 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 4.438e-40
Identity = 86/222 (38.74%), Postives = 128/222 (57.66%), Query Frame = 3 
Query: 1029 LSKVVLLCAVTTVFSGDGLFSPCSSTAPTKSLFEYKSTLLNGEEK-DFNDYAGHVTIAANLASF*GLTNMTYHYLNALQEK---YGGNSQCSLKVLGFPCGQFYNQEPGSNAEIPNLLRYVRPGNGFIPNFNMFNKIEVNGAKEDPIFTMLKGQCPRPNNVIADFLMAVSWRPIRTYDIHWNFEKFLVDHKGQPLYRYAEPNTTYVTIEKHIEAAIQECQSE 1682
            L  ++L C V T    + +   C       ++++Y++  LN  E   F  Y G   +  N+A++ GLT   Y  LNALQE+   YG      L VLGFPC QF  QEPG N EI   L+YVRPG GF+P+F +F K +VNG KE  +F+ LK  CP P+ ++  F  ++SW P++ +DI WNFEKFLV   G P+ R++    T  +++  I A +++ +++
Sbjct:   10 LLPLLLACFVQTSPKQEKMKMDCHKDE-KGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLT-AQYPELNALQEELKPYG------LVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTF-KSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSH-RATVSSVKTDILAYLKQFKTK 221
The following BLAST results are available for this feature:
BLAST of TCONS_00015511 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GPX54.438e-4038.74Epididymal secretory glutathione peroxidase OS=Hom... [more]
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