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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015505 ID=TCONS_00015505|Name=TCONS_00015505|organism=Clytia hemisphaerica|type=transcript|length=1551bp
gtAAATTAATGAGTCAATTATAATGATCAACAATGAAGCGACGGTAGAGG
ATGACTCGTATATTGTTGACGACACACACAAAGTGttgagagaaaaagaa
agatCTACTCCTAAATTTCAAGGGAATTCACCACAGTTATGCTTCCGAAG
GTACTTAGTTGACTGGTTGGCGTTGATAGGTGAAAAGCTTCACCTCACCC
ATGGTATGGTACACCTTGGTGTCGCACTCATGGATTCTGTCATGGATAAG
ATGGATTTTCCAAAGCAAAACCAACTCAACTTGATGGCTATCTGTTGTCT
TTACGTGGCAAGTAGCGAAAGTGGACGAACGAGATGATTTGATACCACGT
GTGCAAACGTTGAAGTCCATTTTTACCAACGATTTTGAAGTTGAAGATTT
CCTGGAAATGGAACTGAACATCATGTCACTTTTGGAATGgagGTTACTTC
TACCTACACCAGTTCATTTTATTGGTTTCTACCTGGAATATTCTATCGAC
GAAAATGACAAACACAGCGGCGAAACAATCACACATCCTCAGAAAGCCAG
AATGTACTTGCGAAAATACACCATGTATTTCCTTGAAGTTGCTCTACAAA
GTAAGTTTCTGTATTCtgacttttgtttttttaagtttattgttacattt
tttctccatttttttgGCTAATTGGCATTTTCGAGTCCATTTTCAGCCCA
TTTTCGGGCCCATCTACGCTgacccgcgaaattaaattcgcGCAAAGTTT
TTCAAGCTctcgaaaaaataaatattgcaaaaatcATTCCGTAAAGTAAC
AAGTTTCTTGCTGCTTTCTTCCAATAACTTAGGAGGGGCAAAGTACTTTC
AACACAGCATTTCTACGTTGATTGATCATAAAATAAGAGGAATTAAATAG
CTGATAGTTCTAGTTAGTTATGTATAACCTTGAAGGGACATGCTCTAGAG
AAAGTCCGGTTAAACACATACAAGTTAAGATAATTGTGAATTAGTAAAAA
CTTGCCATTAAATGTCTTGTGGTGATAAAAGATTTTTGCGTGGTCGTCTT
TTAGCATTATTTCCCATATAATTAGTCACTCCCGACACAGTTTTCACTTT
TTGGACAGTGATCTTATTCTCATATTGGTCTTCAGTTGACAAATGGTGAG
ATTTCTTTTCGTTTTCCTTCGCTTTAAGATCTGATAACCTCTTGAATAAT
TCTCCTCTTTTGATGTGCTCGACGCGGATTCCTTCACGAGTTGACTTGAT
CTGATCGACCGTGTCTTGTATCCGTCGCCTAGCCTGTGCGATCGATTTAT
TTAAAGCTTTCTTATCTTCTCCGTCTGGCCGATATGAATCCGCTTCTGTA
TTTGGCGAGTCGTCATCGTCAATCGGAGATGAACTTTGGTACATTTGTAT
CGTTTCTTTGATTTCCGTTGTTTTGAACATGACTTCTTTTGTTAGTTTAT
TAATCTCCTCGATCGATTTGATCATGGCATTTTTGTTCCTTTCTCGTCGC
CTTTCCTCGTCCATTTTTCTCTAAAAGAATAAACTTGTTTTAGAAGAGTC
T Run BLAST on NCBI transcript from alignment at sc0000212:124425..144031+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015505 ID=TCONS_00015505|Name=TCONS_00015505|organism=Clytia hemisphaerica|type=transcript|length=19607bp|location=Sequence derived from alignment at sc0000212:124425..144031+ (Clytia hemisphaerica)
gtAAATTAATGAGTCAATTATAATGATCAACAATGAAGCGACGGTAGAGG
ATGACTCGTATATTGTTGACGACACACACAAAGTGttgagagaaaaagaa
agatCTACTCCTAAATTTCAAGGGAATTCACCACAGTTATGCTTCCGAAG
GTGCGATTTCTTGTTCCATTTGATTAGTAGTGGGCTATAGAGAGATGTCT
TGAGCAATGAATAATCCATCTGATTTTGTTTGGATTAAATGAGATCTGAC
GATGATATCAAAATTGGGTATGATGGTCAATAAAATTGCGAAGAAACTGG
TTAAGTGTAGAATGTGCACTATcatgaatttcaattttgaaatggCATGC
TTTTACAAACAAGAAAGAATACCAGTTCTATCGAATGTGAATACAAATGT
TGACCTAAATTGTAATTGCCGAACCAAGATGCCTTTCCTAGGGATGATAT
CTTTGTTCCAAAAGAATTGACAGTCCGCACATTTTGATACATTGCTCTCA
AAGAAGAAGATAGTTAATGGAAATTAATACctagttggaaagatattttt
caaatattttgtaaattaagatgaaaaatgaagacaaaaaagattttttc
tactaGACCAAAATCTCGAATTTACACTTTTCTTACACTTTTTTCTTAGA
CTTTTCAtttcttgatttatttttcCTGTACAAACTGTTACAATCCTCAA
AAGTTGGATAATCTACTTTGGATGCCTGTAATATCATATCAAAGAACTAT
TTAAAATCtggtaataaaaaaaattatatttattcaaAGGTACTTAGTTG
ACTGGTTGGCGTTGATAGGTGAAAAGCTTCACCTCACCCATGGTATGGTA
CACCTTGGTGTCGCACTCATGGATTCTGTCATGGATAAGATGGATTTTCC
AAAGCAAAACCAACTCAACTTGATGGCTATCTGTTGTCTTTACGTGGCAA
GTAGGTAGTAAAGCATTCTTTAAGTTCAGATACTGAGAAGATGTGTTCAG
TGTCTTATTAGAGTGATACCTCATTATAGAATTTCTCGAGactattttca
aatcaatttaatACAATTTTTGGActtacctggaggtcctataaactGGT
GCAAAAATGCAATACCTGAAATGTAtgggagcccgattttcgaaaaaata
tcgtcccggccacccggccgaaaatgctagaaataagtcagaaaaactag
tttttacaattttctcAAGATTCCATCATTAGTTGTTTCTGATTATGTCA
GCGTTCCGGCTTATTCTTCCCTTCTAAAATCCATATTGTTAAAAGTAGCc
aagtcaaatattttttaattctcaTGAGAAATTACAAATTAGCTGCGAGC
CTTTTTGATgatatttaagatttttaagAAGTCTCTCTCACAGCAATTCG
TCATCATTATCAGAGACAAATGCTTGATTATTTGCATTTTCGATCATGAC
CTGGCTGAACTCCACCAACACTCTGACTTAAGAGGGAAGATATACatgca
ttgagtttcaagcccgaagggctagaggcgaaactctaacccttctcagg
caagagaaattgaagccacttatttcccatccaaaacacgCATAGAAcac
gccgtaatcatgacgacggattgtatctagcggttcatttgttttggacg
actacattttttaaaatctatcgatagattttagtttcaatccggcgttt
gtgtaaaaactatgcgcgggcgttctggatgagaaataagtggtttcatt
tcccatccaggagtctcacCTCTAGCCTTTCGGGCATGAAACTCAATAGA
TTCATGGTCACACGCCACTCAGGTCTTCTCATGCCAAGataagaatatct
tttaagTCACCTTGATTTTGGTCTTTTCAGCGAAAGTGGACGAACGAGAT
GATTTGATACCACGTGTGCAAACGTTGAAGTCCATTTTTACCAACGATTT
TGAAGTTGAAGATTTCCTGGAAATGGAACTGAACATCATGTCACTTTTGG
AATGgaggtttgaaaatttcttttcatttgttttttagatCGTTTCACCA
GGTAAAAATGTAACCACGTTTAACCTTTTGAATTGCAATCGGCTGTGCGT
TTTTTGGAAATCCGTTTTGTGAAGTCTGGTCGGAGATTATCTGAGTATAA
CGAACGGGCATAAATTGGAGAATAAAAACTGAATTTGTTTTgggaaagaa
aatgaaatttgatatttagCTCAAGCAGATGTGACGTGAGCACTTTTTCC
ACAATTTTTGTCTAACtggtagactagagtctacccTTTGACCTTTATAT
CcttggaccaagctatatccaccatctttggcCGAAGTTTTTTTGCGAAG
CAAGTGGATATTCAATGATAAGaggtacggaggtaatcaaatttgtcaaa
tttgtcaagaaaacaaatcaaaactggCCGAGAACCAACAAAAAGAGCCA
TCTTTGTAGTagatttttgcttttgtttacttttgataatttcgacagac
gattcgaataaaaatgttcgaacgttcgacgaatatcgtttgATCttttt
aaggcaccatttacattaGAAGAACTAGAAATAAAGAAAGAGCGTTGCGC
GGGGCGGCGGACTTGTGCCGCCATGGTTTGTGTGGTGTGTCTGGGGTATT
ATAAGGCTCAAGACCCTGTCTCTTTTGGGGTTTTATCAGAGTgcctctta
ttttgctagcaacttgcgaattgaggtggagtctagatcgcttcgcaacc
cttatacaatacggctagtttgaATTGGTAACCGttaagaagccattgca
gtgttaaaaattaacgtctaacggcgctacatcatcaaacgTTTTCGAGG
TAAAATacactattgagtagtgccgccattagggtaccactccgatcaaa
gatttttcttggccgggcgggattgagaaacttggtccagggtatataaa
ggtcagcgAGTCTACCtctttataatttttgatgacaatGAGTCCTGTGA
GTACTTACTGAGGTCGCCATTCGGAAAGAAAAGAACTAaatatccaaata
aaaataactacTCTGCGTTGAAAAATTtaacgaaaaatgaaaaataaaca
tgaaAAACAGATTCGTAGATTTATTCCTATTTCGTCGATAGCTTTACAAT
ATATTGTAAGAACTTAACAATATCATCCCAACACTGACCAATATATTGTG
TAACGTATGTAATAACGATAACAAGTGCTAAAAATTGACCAAGCGTGTCA
AAAATATGTCACGGACTCTGAAGTATGAGGAGTTGCCTCGTAAAATTTAG
TCAGTTAAAATGAAAGTTAAAAGTAAGGGGTTCTATTTTCGACATTATCA
aagacgatgacgtcatcaattggtATTTCACAAGTTAATAAAGATATCTG
ATTAGGGAGGATGGGCTCTAGGCTCTACCTCTTCCCGCTCATGCTCCTTT
CCCAAGATTGGTTGGgtaaaacacttaaaatattTTACTCACGAGCGTTT
CAACTCCTCGCTCTTAAGAAAACCATCTTCTAAACCGTATTGGAAAAATC
CAATCAACATTATACACAGACAAGACGCAACGGGTACGGAAAGTACGGCG
GTCGCCGTATCAGATTTCCACAAAAACCcccgaaattttcctcttcgtcg
gtaaacTCGCTATAAACTCGCTATAAAATCGcctaaatttcctcattcgc
cagatataaaaagcttccgtcgtgcctgaaTATACATAAAGACTCCCATA
CTTATGAACATTAGGTGATAACCTCGGTCGTGAAAGGATAATGTATTACT
TTTGTACTGTGTAAAGCAATATCAAAAGGTTTATCCATATTTGTCAATGT
GTATTAAGGGACGTGGAGTAGTAGATCAATAAAACATAACTTCAGTAAAG
CAGTTGTACACATGCGTACGCGTCATATATGCCGAAGCCTGACTAAAGTC
ACGCATAGAACAGTAGTATACTATAGAGAAAGGTACTTAGCAAAAAGGAA
TCAATGTATGTTTCAGATTTCCATTTCATCAACAGACGTGGGTAAGAGAG
GGATTGCgaaatctttcgttttcaactTGGTTAAACCGAAAGTGAAAGTA
GATTCATATTGACATTAAAGGTCATCCAGTTAAAGGACACGCAATAAACT
CGATTataagttttcattttattttataaatcaTTATTATAAAAGATCCC
TAtttaaaaatattgctttatcATGATAagctaaaaaaagaagaaagaaa
ttttaacaaagatactaaaaaattatttttcccaaaaaatacaGTGTTTA
TGCGTCCATTAAACCAGAATTATTAACGAATTCTTCAAATTCTTGGTTAC
TAGTTTGAGTTTTCAGTGTTTTCTGTGGGACAGTTCAAACTGTGGTCTTC
ATTTTCAACAGGTTGTTTGATACATTCAATCTCAACGTTTTCCAACGGCT
CGTCTATCTCATCTCCACTCTTGCACTCATACAATCCCGTCATAACGATA
AAATTGCTTTCTCCAGGATATTTGATATAAGCTTCATCGCCACTGGCAAA
GATGACAATTCTTTGCTGTGTTGTAAGTTGTTTCTGGTGTTTTTGATCAT
CGGCCATAGTTGTAAAAGTTTTAAAGCATGAAAACCTTCCACACAAGATG
TTATCTTTGTTCCAACTATCCCGGCTATTACTTTTTCGGTgcataaaatt
tgaataatggTATGACTAATTCAAGATACTACATTTGATGATTCAGCATA
TAGAACAAAAGAAGAGTAGTAAGTGGTAGTAGTAGACTAACTTGGAAATC
TCTGTAATAATAGTAGTAGAGAAAGtgaaaaaggagaaaattaCTTATTA
GAActtaatcaaaatttaaaaaataaatataagaaTAATCTGAATAATAC
CTCTATCCTGTTTTTATATAATGATGGTATCCATTAACAAGTTCTGCTCC
TTTAAATTTGCTGccaaataaaatcaaactttactcgattattatttcat
ttttaaactaTTCAATCTTATAACGgtataaaaacaacaattttcttatg
aaaaatagaTATGGATAGCTGTAAGGGAAAATTTTAATCGACCGATTGGG
ATAAAATAAACTTATGTAAGCACGGAATTTGAAACTCATTTCTGTTGTAT
TTGACAATTCAGAGTACAATTTAAACACTATTGATTGTAGGTATCTAGAT
TGTGACGACTTTAACTTTGCTTTTTCTAAtacatatgtttttttttaata
agcataacgcttataagcatatgaaggctcagatttgcagatttcctaag
cataacataagcatatacgctagcctgaaatatttttcaagtagtCAATC
TCTTTCTATCCAAAAAGGTTTGTTTGcaagtggtcaagtaaaaaaagaca
ttccacggctagccacattccactgctcaaaaatttaaatgctttttgaa
tcgaatataaacaaaattttaaagattttactaaaaaatttggtaggggt
gaatcaaaagcataataattcttaagcatataataagcatattctatgtc
tggatgctttgaaagcttTTAAGCATACTcaagcctgaccaaggggcata
cacttgcttataaaaaaaaaaaacatgtacatctTCACACCTCTCTTTTC
TTCACTTAAATATCTggtgggagtttctaaacatcgaccagaaatggcga
ccacgaccagcgaccacgaccggcgaccagataaatttgggttatcgagt
ttttcctctttctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttagaaaatcc
atgcctaagttgggttaaaactgcttgaaaagaagaaaaattgtagtttc
ttgtcatttttttccaaactgaggctgggcatgttcattacgatgttctt
aatttttcgacgaatttcagcctaaatgttcttatagactgggttctaat
aaaaaaaaaacgtgtaattgatGAGgttgatatctctaaaactgccctTC
CCAGGGTTTGCCTACTCacaatttctatctattcatactaaaagCATCTC
ATTCGGNAATATCTGCTCTTTACCGAAACATTTTGATGAGTATAATAACT
TCTTAGAAACATTAAATCACGAATTCAAAGACTTAGGAATTTCGGAATCT
AGGCTTATTTACAAAAAGCTAACAAGGAAATAAGCGCCTTGTGCTTATGG
GTAATTTTAATATCAACTTGCAAGAATGTGGTACCTCTCCACATGTAAAT
AACTTCGTAGACTCTCTTGaatccttttttcttttacctagtATTTCTCT
ACCTACCAGAATCACTGATAGGTCNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTTTCTTCACTCCTTCTAAATACAAACCTTTAACAG
GAAATCTTCTTTCAGGTATTTCTGACCACTTGCCTCAATTTCTGATATTt
gagaattttcattttaaggaaacaaaatattacaggatatggaaaaattt
tgatgacaatAAATTCAAAGAATCCTTTTACAGAGTAGACTGGAATGACA
TCTTGCATTCTGACTCGGATAATCTAGATCTTCTTTTTAAGAGCTTTTTT
GATCGAATGAATACCCTAATAGATATACACGCACCTCTGCAAAAACTCAC
CAATAAGCAAATTAAAAAGGGAGCTAAATCTTGGATAACTAAAGGCATTA
AAACCTCTATTGCTAAACGAGATCAACTCTTAAAGGCTTAAACACGCGAG
AGAAGGACAATACTATTAAACACCAACTCCACATCAGATATAAATTCTAC
AGAAATCAAATTGTTAAGCTCTGTAGAAGAAGTAAGAATAACCATTATAA
AAAGTACTTCCAAACAAATATAAAGAACAGTAAAAATATCTGGAAAGGCG
TATACGAAGTGATCGAAAGTAAAAAATGCCGTAGTAGCACAACAATATCT
CTAAATATTGACGGACAAGTAACATCTGATCCTAAAGTAACAAGCGAGGA
ATTGaataaatacacgtttttttttatataaggaaccttaactttgctct
gagcctggagttccttatttttacagaaaatttcagcctcaaagttcctt
ttgAGTTCCTTNCTTCAAAAACCAATTTGGATTCCGTAATAAACACTATA
AATACTTCTCACGCATTAATAAATCTAACAGAAAAGATTCGGTCAAATAT
TGACAAAGGGTTGTATTCTTGCGGGGTATTCATTGATCTTCAAAAAGCTT
TCGATACAGTAGATCATGAAATTCTTCTATCAAAACNGATTACTTTTACT
GTTCCTtagaacttgttttcttattcttagcctgagcagttccttaacaa
ttccttattttttggaccattttcagcctcgagttccttataaacgtgtt
ccttataaaaaaaaaaatgtgtattttacttCAATACCCGATAAAATACG
TCAAACTATAAATGTTTATAATAATGAGAAAGCGAACTTTCATCCAACTC
TTGTAAATTCTCCAATAAATTCTCTGTTTTTCGAGGAGATAAAAGCTGAG
GACATCGTAAGAATTATCAATGCTCTTAAACCTAAGGAAAATGGACCATT
CAGCATTCcaccaaaaatcttaaaatcggttCTTGGTGAGGTAGCTCAAC
TccttgctaaaattttcaatttatcaaTACAGACATGCAAGTTCATAACA
ACTCTTAAAGTAGCAAAAGTAATACCTGTGTAAAAAAATAAAGGTTCCCC
ATACGATCCTAACAACTTTAGACCAATTTCGCTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNGCTGACGACACCTGTCTTCTCTCTTCCGATTCGAATCT
AAATTCACTTGAGACGAAAGTGAATTCTGACTTAATCAGACTCTCCTCTT
GGCTTCGTGCCATCAAAATCTCTCTTAATACTACAAAAACTGAGGTTATC
CTGTTTAGAAGTAAAAATAAACCTTTACCATATACCATGAATCTCAATCT
TGATGGGCATGTCTTGAAATTTTCGAAATGTGTCAAATATCTTGGTCTTT
TTCTCGATGAATGTCTAGCGTGGAATTTCCATTTTGATCATTTATCCGCA
AAACTTAGAAGGTCAAATGGCATTTATCCAAACTGCGTCACTTTGTTCCA
CAGACCATTCTTAAAACTTTATACTATGCTATATTCCACTCTCATGTCTT
ACGCAATAATCGTATGGGGGCAAAGTCTCACTCAAAACTCTAGAAtaggc
aaacttcaaaaaagatgCGTGCGCATCTTGACTTTTTCCGATTTTAATGC
AGAATCTGCTCCTCTTTTCATTAACCTGGATATTCCAACTTTGCCACATA
CTGTAACAAAGTTCAATATCCGACTCGTACATCAAACTCTCACTAATCTT
TCTCCTGAAAGTGTTACGAACATTTTAAACTTCAAAACTCTGTCTCATAA
TTATCTTACTAgaaataacgaactgaaacttCTGGAGCGCCCAAAAGCCA
AAACATTAAACTATGGATTGAAATCGATTAAGTACCAATCTCTTTTAAAC
TGGAACCAGCTAATATCACATACTAAAATCGATCTACAACCATTATCTGG
ATTTATTAACTGGTTGAAGTAAAAGCCGGTCAATACAAGAAAATAcgcta
ttttgattggttctctAGCGGTCAATATATTACGGTAAAGACCACTTCAG
TGCTTTGGTCAAATTGACgatgattttgaaaaaggaaatttgttttatag
aaaagtttcgtccgtttgaacatgatttaaaaaactGATTTGCAACGACT
TCTCATAAGAAAGGGACGTCAgaataaatcaaagaaaatattgggtaaaa
aagaaacgaaaaaatcatggaaaatgAGTCGAAAATGCATTTTTTGGCCA
GAAACACACAAAGAATGTTCACCAGTGTTAATAAACACAATAATATAACT
GTTTTCTCGGTCAATacgtaaaatattgaccgcACCCGAAGTacagaccg
agcttgcgaggtctgTGCGCAGGATAAGGTCAATATTTTACCGTATTGAC
CTCCAAACCagttattattgtattaatattatcaaaaaaaagataagcga
attccttcaaaattgacctcttgCATACCAGAAAAATGAAAGTCCATATA
GATATAAAAATACTCtaatttgatttattaaaacaaaagattactTATAT
AACTATATTTTTTTTGTCGATAGTTACGttgcgttttttttttattttgt
tatttggaatattgaaatattgttaCTCTAATAGTTACCGTGGCTTGTTA
GTGCCATGTGTAAACTACTTATACTTAGAGGTTCTAAGTCGACTTAGTAG
TGCTAAAGTCAACTTGGTAGTGCTAAGTCAACTTAGAAGTGCTAAGTCAA
CTTAGAAGTGCTAAAGTCGATTTAATTGCCAAGTTGATAAAAGGCGCGGG
ACTCTCTCTGGCATGTATCtagtgaaatttaaaaaaggtctGGACCCGAa
gcaaaatcgaaaaaattgcATATTGTGAATTGATCTTACACAGCAACCAA
ACACCACCACCACACAACACTTTCTTGATCTTACATTACACTCGTTGTTC
TGCTTTAACTGCATATCATGACCTCGGCCACAAAACATGCCCATTATTGC
CGTACACAACACTATATGCCCACCTCTGCTTTTCACATCAATATGTACCC
CTTTTATATACACAACAATGGAAGGCCCGCTTCTTACGGAGTTGACTTAT
GACTTAGTACTTCTAAATCGACTTAGTACTTCTAAGTCGACTTAGTACTT
ACTTATAAGTTTACTTACAACTTAGCTCTATCAAATCGACTTAGTACTTG
TAAGTTGACTTAGAACCTATAAGTATAAGTAGTTTACACATGGCACTAAC
AAGCAACGGTAAATAGTTATATCAACCccacagaaaaaaaaatctgcgtC
CAGGTAGCCATTCCATATGATTAGACGGAATTTTCTATTGGATGGACTCC
TGGCCTGCAATCCCTCCCTTGatttatacaaacttaaatatgtaaatttt
taatgatatgcaggCGAATAAATAAGTTTGAATTGAATTGTATTTCGGTC
ATGCTTTTGCTTAGCTAgacaaattcgaaaaaaaattcttagaatTGTTG
GATTCTCGGAAGTATCAAATTAATTTTCTCAATAATATTCTTAGACATAA
TATAGTTATAAACTTTTtcagggaattccccttttttaatttcgccttag
cgaaaaATATTACAATAGGCATTCTGTGTTTTTGATGaaagaaatttaga
aaacgaaagtactcgatacggtggacgaaccaatgaagtataagcccgaa
ggcagttgtgttgaagtttttataagatgctcacataattgaTTAtccaa
aacaatagagatgacgcgttctttagaaaaatataataaaagtttttgtt
tgaatagttaacgaccaatccaatgacaaaaattcttgtaaaatgttcat
cttgaccccccgaagggctagaatcgaatctccttggtacgatttgaagc
caacaaatcctaccaaagttgcgcggccttgagcggctcgcctggttttt
acacaaatgacagattgaaaccaaaatttaccgctaaatttgaaaaaaaa
tatcaatcgtaaacaaaggaattgctagattcaatctgccgtcaaaaata
cggcgcattttttaaggcttcactttttcttgtctgAGAAAGGTTAGGGA
TTTAACTCTAGCCCTTCgtgctttaaactcaatgggacGAACACACTAAA
TTATTGTTCACTAGTTTCTATAAAACCATGCACGCTTTTCGCGCATTTTT
TAGCCTTCATGTCTTGATAGACGAGGATATactgtattacttcgaatata
cgtcccccttcttttaaacgccccctcgaataaacgcccctcgtttaagg
aaaaatttttgtttgagtTTGTTTGGAACAAGTAGCAGTAAGTAGAAGTA
TGATATGAAGGAAAACTTAGATATACGATAGTAATTGTATTCTCTCGGTA
TTCGAACTAATTTTTACCCATTTCTACATTCCTACATTGACATAATTATT
TGTACGATCAAGTGATAACTGAAAAGGTAAAATAAGGTTCCAATTCACAT
TACAAAAGGGACCTAGCTTATAattcaataaacgcccccttcttttaaac
gcccccttgaATAAACTCCCCTCCTaaaacccaaaattttgtcgagCATC
CGTTTATCCGAAGTAATGCGgcatctttcggtaattaggtTAAAAGATCA
ACAAGAGACGGCGCTCAATAATGAGAatattaatttttcttataagcatc
tactttataagaatcaaatcaatagctcttgatagacggtgatatacctt
tcggtaattagttcaaAAAAAAGATCTGTATTTTTTCCACCTAAACTAGA
GGTTTTTTCCACACTTCAACATCGATTCCTGATGGATGAGGACGCATCAG
CTGACACTTCCATAGAAGACCATCCCAGTCAAAATTTCGACGATCTCCGA
TGCTCCGAAGCGAAATGTTACGGTTTCGAAGAAAACATCTTAGTATATAT
GGCATGTGAACGTTTTGTGCATTATAAATGGTGAAAGACCCTTCACAGGA
TGAGCCCAATACTCGATCAAAGAGGTGATTAAAGAAGCTCTGCGGGAAGA
AGAAGCCGAGGAAACGAACAAACAGAAGCGTGCTTCGAACATTATTGTTC
ATGGAGTACCAGAACAAGATGCCAACACGGACAGGAGCTGGGTTGAGGAT
CTCATTAAAACAACCCATTCAAACGTTACCATCAAGCGCATTGCCCGTTT
GGGTAAGACCTCGAACGATAAGAAGCGTCCCATTCTGATCTGCCTCTTGA
ACGAAGACGAGAAATTCAATCTTCTTGGAAATTTACCAGCTCTGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTG
AGCGTTACTGAAGATCTTACACCTGAAATGCGTAAGAAATTGCGCCTACT
GTCTATTGAAGCTAAAGAACTTAATGAAACCGAAAAACCAGCAACAGAAA
TATTATCGCGTCCgggttgattaaaaaaaacggCTTCACTGTCAAGAAGG
TACCACTCAGAAAACCGTCAACCCCCAACCAGTCACCAACAATGAAAAAT
GTCTCCTTCTCGAACAACCTAACGGAGACAAATATCATCGACCAACAGGA
GCCAACTTtgctcaaaaagaaaaattaatcaaatatATGAAAGTTCTGTA
TACAAATCCCGATCAGTTGACTTCATTTAAAATGAAGGAATTACAGTCCA
TGGCCCATGAGGAAAAGCCTCGCATCGTCGCAATCTGCGAAGCGAAGACA
AACGTAGTTACGTTGAGGGAATTACATGAATACGAATTCGATGATTATAA
AATTGCTAGTCAAGTTAACTTAGACACAGATAAAGGGCGTGGCGTTGTCA
TACTTGTTCACACCTCGATAAAACCTTTAGTAGCCGATGTCAAACCTCCA
ATCACTTTCAACGAAGTATGCATGATTGAAGTACAATTATCTGGAAAAGA
tttgcttgttgtcacgtgcATCTACCGAAGTCCAAGCAGTTCTACATCAT
CAAACGAAAATAACAGCAACCTGAATTGCATGATCAAATCTATTGCACTG
AACAACAATTATTCCCACAAATGTTTGCTAGGAGACTTCAACTTCCCAAC
GATAAATTGGGAAAATTGGACAACCCCACACATAGAAGATAGTAAAGAAG
AAAGATTTCTAGATGCTTTGAGAGCTGCATATCTTCATCAACACGTTGAC
GAGCCAACTCGATGTCGTGGAACAGATGACCCATCTCTAATCGACCTGAT
ATTGACAGGGGAAGAAAATCAAATAGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAT
AGCTCGTTAGCGTTCAAATTTGCTTGTTACGCTGACCCCAAAAGTGTACA
GACAAGATATATCTTTGCATCGGCCAATTTCCAATCGATGAATAACGATA
TTAGCTTAAGAAACTGGAAACAAAGTTTCAAGAAAGCATCCGTGGAAACA
TCAGTGGATGATCTTTGGAAAACTTTCAAAGAAGCTATACTCGACCTCAG
AAATAGGTTTGTACCACTGAAAGAAGTAGGTAANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAAGGCAAAATC
CCTATCAAAAAGGACCTGCGAGATGAAATCAAGAGAAAGAAATTGCTGAA
TAGAAGGTGGTTAAGATCTTCACCTCTCTACCGAGATCATCGCCGCACCA
ATTATGTACTCGCAAGGAATAGAGTAAATCGAATGCTGGTGAAGGCACAT
CGGGCATATGAGAAGAGTATCTGTGACAAATCCAAAGAGAAACCCAAGAT
CTTTTGGTCTCACGTAAGAAGTAAACTCAAATCAACAACTGGAGTTTCGC
CACTTCTTCAGAACCCTGACGATAAATCGTCTCTTAAACATGACGACCAC
GAGAAGGCAAACATCTTGCAAAAGTAGTTTTGTAGTGTCTTTACTGATGA
GCCAGAGGGTGAATTACCAGATTTCCCTGcacaaacagaaaagaagatta
GTGATCTATTCGTCACCGAGGAGATGATGAAGAAACAGATAAAACTGATT
GACACCAACAAATCCTTTGGTCCAGATGAAATTCATCCCAAAANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTGGTCGACCACGTAG
CCGAGCCTTTGGCGATCATAATGAATAAAACCTTGTCGTGTGGAATCATA
CCGAAAGAATGGAAGATGGCTTACGTTTCGCCAATATACAAGAACAAGGG
TGCTCAAAATCTAGCAATAAACTATAGACCAGTCATTCTGACATCAGTTG
TTTGTAAATTGATGGAATCATTTCTTAGGAGGCATATCATGAATCATCTA
CAAGATCAAAAACTATTGTCAAATAAATAATACGGCTTCATCAGTCACCG
ATCAACAGTTACTCAACTCCTGAACTTCTTGGAGAAGTGCTGCGAAAGCA
TTGCTAATAGTAAAGTAGTTGATACGatatatttcgattttgctaAAGCC
TTCAATACTGTTCCCTACCGTCGCTTGCTGAAGAAACTTGAAGGATACGG
AATATCAAGTAACTGTCTACGATGGATAGAGTCTTTCTTGACAGACAGAA
AGCAACTCGTAAAGGTCGATCAAGGTCGACCAAGTACAAACTCCGTTGTA
AGtggtattcctcaaggaagtgTCCTTGGACCACTTCTCTTTGTTATCTA
TATCAATGACCTCCCGGACAACGTCATCTCATCTATTTTCCTATTTGCCG
ATGATACGAAGATAGTCAAAGAGATCAACTCAATCGAGGATTCTTTGACA
ATCCAACATGACATCAATGAACTCGAAAATTGGTCGAGaaaatggctttt
aaaattcCATCCAGATAAATGCCATGTACTAACTCTCGGGAAATTCGAGA
ACATCATCCATGCACACCCATACTCGTTAGATGGAAACCAACTTGAacac
gtttcccttgaaaaggaTCTAGGTGTGCTGATCGACTTCGATATTACCTT
TGAAGAGCACATATCGAAACAGGTCAAGAAAGCAAACTCAATTCTCGGTG
TGATCAGAAGAAGCTTCGAGGAATTATGTCCCATCTTTGTTCGACCTCAT
CTGGAATATGCTCAATCTGTATAGTCACCTAAATTGCGTAAGCACGTCAA
CCTACTTAAAGGGGTTCAAAGGCGTGCAACAAGAATGGTACGTCGTCTAC
GAAATTTAACATATGAGCAGCGCCTGCGAAAACTGGACTTACCATCTCTT
GAATTTAGGAGATAATTTGGCGACATAGTTCAAATACAGTATACAAACAC
CTTCACTTCTATGACAAAAATACcatcgtcaaaaagttttctcgcCGAAC
TCGTCCCCATCGTAAACATGATTACGAATTGATTCCTAATTTCTCAGATG
ATGGATTAAGGGGTGtgtaaacaaaatcattttatcaTAGATGCATACCG
GCGTGGAACCAGCTCCTAAAAAATGTTGTTAATGCTAAGTCAATCAAAGC
ATTTAAAGAAGAACTGACTCAGGCATGGATAAAGCACCCGTTACGTTACG
ATTCAAGATCACTTTTGTAATCATTATGTAGATAgaccggtttagaggcc
ctagtgtgcctggactgtaaatcctttaataaaataaaataagataaaaa
taaaataaaaagtaaacaagggatggcgtacaatatgagcatatttatct
ttattataagcatctactttataagaatcaaatcaataactcttgataga
cggtggtatacctttcggtaattaccttatcggccctttttacaccggcc
cttattggcgtttttttgggctcgtggcgtaataagggctggCGTTAAAA
GGATCGGCGTAAAAAGGACCAAGATTTTGCATTTTTAACCTAACCTAAAc
ggcgttaattttttatcattatttctcaatttaaaggaaatTAGTATGAT
TCAAAGtcgaaaattatccattgttttactccatatttaaaacttcagtg
aattatttaatatattcaaaaatcagtgattgggctattccagaaatagt
ctgtacccctgTGTAGTCTGTATGTTGAGGAGGTGGTCagcaaaatatgg
tcaaaaatccagggtagtcagtaaaacgaggtcaAAAAGGTCTGACTGTA
GGACTGCAGAGATATATGTTGAGGaggtaaaatccagggtagtctaaaaa
ttgaaaaaaatccagaGTAGTCTAAAAGATGAGAAGAAAGGGGGTGTAGT
GTTGGAAAAATCCAAGGGGGCTGTGGttggaatagcccattttcGATGGA
ATCTttaacagtttactactgaaaaataaatgacatttttgaagcataag
tagccatttttccaaattttggcgttattaacggccctaattggcgtaag
cccaaaattagactgtggcgtaataagggccggcgtaaaaggcaCCGGCG
TtgaattagggccggcgtaaaaagtgCCGATAAGGTAGTTCTTACAAATT
TAATAGAGGACGGTGCAAAATATGAGAATGTTAATCTTTCTTATAGGCAT
CTACgttaagaatcaaatcaatagtaACTTTTAATAGAAATCACATTTCG
TTAGTTAATGCTTACAAAATAAGTATTCAAATATTCTGAAATATTAACTG
CTAACTTGTGCTAAACGCATGTTCCACATCGTTGTACTGGTTGTAACAGT
TTTAACTTGATATAATATCAGAGAGGTAGAGAAAATGTCACATGATCAAA
TacctttttatcaaatattttgactttgatgCTATAATATAAAAAGGTTC
TCCAGACACGTCTTTTTACATTGAAGTGTTATGCATTTTTCTCAACAGGT
TACTTCTACCTACACCAGTTCATTTTATTGGTTTCTACCTGGAATATTCT
ATCGACGAAAATGACAAACACAGCGGCGAAACAATCACACATCCTCAGAA
AGCCAGAATGTACTTGCGAAAATACACCATGTATTTCCTTGAAGTTGCTC
TACAAAGTAAGTTTCTGTATTCtgacttttgtttttttaagtttattgtt
acattttttctccatttttttgGCTAATTGGCATTTTCGAGTCCATTTTC
AGCCCATTTTCGGGCCCATCTACGCTgacccgcgaaattaaattcgcGCA
AAGTTTTTCAAGCTctcgaaaaaataaatattgcaaaaatcATTCCGTAA
AGTAACAAGTTTCTTGCTGCTTTCTTCCAATAACTTAGGAGGGGCAAAGT
ACTTTCAACACAGCATTTCTACGTTGATTGATCATAAAATAAGAGGAATT
AAATAGCTGATAGTTCTAGTTAGTTATGTATAACCTTGAAGGGACATGCT
CTAGAGAAAGTCCGGTTAAACACATACAAGTTAAGATAATTGTGAATTAG
TAAAAACTTGCCATTAAATGTCTTGTGGTGATAAAAGATTTTTGCGTGGT
CGTCTTTTAGCATTATTTCCCATATAATTAGTCACTCCCGACACAGTTTT
CACTTTTTGGACAGTGATCTTATTCTCATATTGGTCTTCAGTTGACAAAT
GGTGAGATTTCTTTTCGTTTTCCTTCGCTTTAAGATCTGATAACCTCTTG
AATAATTCTCCTCTTTTGATGTGCTCGACGCGGATTCCTTCACGAGTTGA
CTTGATCTGATCGACCGTGTCTTGTATCCGTCGCCTAGCCTGTGCGATCG
ATTTATTTAAAGCTTTCTTATCTTCTCCGTCTGGCCGATATGAATCCGCT
TCTGTATTTGGCGAGTCGTCATCGTCAATCGGAGATGAACTTTGGTACAT
TTGTATCGTTTCTTTGATTTCCGTTGTTTTGAACATGACTTCTTTTGTTA
GTTTATTAATCTCCTCGATCGATTTGATCATGGCATTTTTGTTCCTTTCT
CGTCGCCTTTCCTCGTCCATTTTTCTCTAAAAGAATAAACTTGTTTTAGA
AGAGTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015505-exon-sc0000212-1491911889:124425..124574 | TCONS_00015505-exon-sc0000212-1491911889:124425..124574 | Clytia hemisphaerica | exon |
| TCONS_00015505-exon-sc0000212-1510915933:124425..124574 | TCONS_00015505-exon-sc0000212-1510915933:124425..124574 | Clytia hemisphaerica | exon |
| TCONS_00015505-exon-sc0000212-1575043694:124425..124574 | TCONS_00015505-exon-sc0000212-1575043694:124425..124574 | Clytia hemisphaerica | exon |
| TCONS_00015505-exon-sc0000212-1491911889:125214..125378 | TCONS_00015505-exon-sc0000212-1491911889:125214..125378 | Clytia hemisphaerica | exon |
| TCONS_00015505-exon-sc0000212-1510915933:125214..125378 | TCONS_00015505-exon-sc0000212-1510915933:125214..125378 | Clytia hemisphaerica | exon |
| TCONS_00015505-exon-sc0000212-1575043694:125214..125378 | TCONS_00015505-exon-sc0000212-1575043694:125214..125378 | Clytia hemisphaerica | exon |
| TCONS_00015505-exon-sc0000212-1491911889:126305..126431 | TCONS_00015505-exon-sc0000212-1491911889:126305..126431 | Clytia hemisphaerica | exon |
| TCONS_00015505-exon-sc0000212-1510915933:126305..126431 | TCONS_00015505-exon-sc0000212-1510915933:126305..126431 | Clytia hemisphaerica | exon |
| TCONS_00015505-exon-sc0000212-1575043694:126305..126431 | TCONS_00015505-exon-sc0000212-1575043694:126305..126431 | Clytia hemisphaerica | exon |
| TCONS_00015505-exon-sc0000212-1491911889:142923..144031 | TCONS_00015505-exon-sc0000212-1491911889:142923..144031 | Clytia hemisphaerica | exon |
| TCONS_00015505-exon-sc0000212-1510915933:142923..144031 | TCONS_00015505-exon-sc0000212-1510915933:142923..144031 | Clytia hemisphaerica | exon |
| TCONS_00015505-exon-sc0000212-1575043694:142923..144031 | TCONS_00015505-exon-sc0000212-1575043694:142923..144031 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000212 | supercontig | sc0000212:124425..144031 + |
Blast
BLAST of TCONS_00015505 vs. Swiss-Prot (Human)
Match: CCNJ (Cyclin-J OS=Homo sapiens GN=CCNJ PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 7.920e-25 Identity = 35/84 (41.67%), Postives = 49/84 (58.33%), Query Frame = 2
Query: 62 IVDDTHKVLREKERSTPKFQGNSPQLCFRRYLVDWLALIGEKLHLTHGMVHLGVALMDSVMDKMDFPKQNQLNLMAICCLYVAS 313
+ D H+ LR KE P ++G SPQL RRY D +A++ + L HL V L+D MD+ D Q QL+L+A+ CL +AS
Sbjct: 12 LAADIHQALRYKELKLPSYKGQSPQLSLRRYFADLIAIVSNRFTLCPSARHLAVYLLDLFMDRYDISIQ-QLHLVALSCLLLAS 94 HSP 2 Score: 63.1586 bits (152), Expect = 7.920e-25 Identity = 38/101 (37.62%), Postives = 61/101 (60.40%), Query Frame = 3
Query: 312 VAKVDERDDLIPRVQTLKSI--FTNDFEV---EDFLEMELNIMSLLEWRLLLPTPVHFIGFYLEYSIDENDKHSGETITHPQKARMYLRKYTMYFLEVALQ 599
+K +E++D +P+++ L S+ TN V ++ L MEL ++ +W L LPT HFI +YL ++ E D H G + +K ++Y+ KY YFLEV+LQ
Sbjct: 93 ASKFEEKEDSVPKLEQLNSLGCMTNMNLVLTKQNLLHMELLLLETFQWNLCLPTAAHFIEYYLSEAVHETDLHDGWPMICLEKTKLYMAKYADYFLEVSLQ 193
The following BLAST results are available for this feature:
|
