TCONS_00015504 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015504
Unique NameTCONS_00015504
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1548

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015504 ID=TCONS_00015504|Name=TCONS_00015504|organism=Clytia hemisphaerica|type=transcript|length=1548bp
agtAAATTAATGAGTCAATTATAATGATCAACAATGAAGCGACGGTAGAG
GATGACTCGTATATTGTTGACGACACACACAAAGTGttgagagaaaaaga
aagatCTACTCCTAAATTTCAAGGGAATTCACCACAGTTATGCTTCCGAA
GGTACTTAGTTGACTGGTTGGCGTTGATAGGTGAAAAGCTTCACCTCACC
CATGGTATGGTACACCTTGGTGTCGCACTCATGGATTCTGTCATGGATAA
GATGGATTTTCCAAAGCAAAACCAACTCAACTTGATGGCTATCTGTTGTC
TTTACGTGGCAACGAAAGTGGACGAACGAGATGATTTGATACCACGTGTG
CAAACGTTGAAGTCCATTTTTACCAACGATTTTGAAGTTGAAGATTTCCT
GGAAATGGAACTGAACATCATGTCACTTTTGGAATGgagGTTACTTCTAC
CTACACCAGTTCATTTTATTGGTTTCTACCTGGAATATTCTATCGACGAA
AATGACAAACACAGCGGCGAAACAATCACACATCCTCAGAAAGCCAGAAT
GTACTTGCGAAAATACACCATGTATTTCCTTGAAGTTGCTCTACAAAGTA
AGTTTCTGTATTCtgacttttgtttttttaagtttattgttacatttttt
ctccatttttttgGCTAATTGGCATTTTCGAGTCCATTTTCAGCCCATTT
TCGGGCCCATCTACGCTgacccgcgaaattaaattcgcGCAAAGTTTTTC
AAGCTctcgaaaaaataaatattgcaaaaatcATTCCGTAAAGTAACAAG
TTTCTTGCTGCTTTCTTCCAATAACTTAGGAGGGGCAAAGTACTTTCAAC
ACAGCATTTCTACGTTGATTGATCATAAAATAAGAGGAATTAAATAGCTG
ATAGTTCTAGTTAGTTATGTATAACCTTGAAGGGACATGCTCTAGAGAAA
GTCCGGTTAAACACATACAAGTTAAGATAATTGTGAATTAGTAAAAACTT
GCCATTAAATGTCTTGTGGTGATAAAAGATTTTTGCGTGGTCGTCTTTTA
GCATTATTTCCCATATAATTAGTCACTCCCGACACAGTTTTCACTTTTTG
GACAGTGATCTTATTCTCATATTGGTCTTCAGTTGACAAATGGTGAGATT
TCTTTTCGTTTTCCTTCGCTTTAAGATCTGATAACCTCTTGAATAATTCT
CCTCTTTTGATGTGCTCGACGCGGATTCCTTCACGAGTTGACTTGATCTG
ATCGACCGTGTCTTGTATCCGTCGCCTAGCCTGTGCGATCGATTTATTTA
AAGCTTTCTTATCTTCTCCGTCTGGCCGATATGAATCCGCTTCTGTATTT
GGCGAGTCGTCATCGTCAATCGGAGATGAACTTTGGTACATTTGTATCGT
TTCTTTGATTTCCGTTGTTTTGAACATGACTTCTTTTGTTAGTTTATTAA
TCTCCTCGATCGATTTGATCATGGCATTTTTGTTCCTTTCTCGTCGCCTT
TCCTCGTCCATTTTTCTCTAAAAGAATAAACTTGTTTTAGAAGAGTCT
Run BLAST on NCBI

transcript from alignment at sc0000212:124424..144031+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015504 ID=TCONS_00015504|Name=TCONS_00015504|organism=Clytia hemisphaerica|type=transcript|length=19608bp|location=Sequence derived from alignment at sc0000212:124424..144031+ (Clytia hemisphaerica)
agtAAATTAATGAGTCAATTATAATGATCAACAATGAAGCGACGGTAGAG
GATGACTCGTATATTGTTGACGACACACACAAAGTGttgagagaaaaaga
aagatCTACTCCTAAATTTCAAGGGAATTCACCACAGTTATGCTTCCGAA
GGTGCGATTTCTTGTTCCATTTGATTAGTAGTGGGCTATAGAGAGATGTC
TTGAGCAATGAATAATCCATCTGATTTTGTTTGGATTAAATGAGATCTGA
CGATGATATCAAAATTGGGTATGATGGTCAATAAAATTGCGAAGAAACTG
GTTAAGTGTAGAATGTGCACTATcatgaatttcaattttgaaatggCATG
CTTTTACAAACAAGAAAGAATACCAGTTCTATCGAATGTGAATACAAATG
TTGACCTAAATTGTAATTGCCGAACCAAGATGCCTTTCCTAGGGATGATA
TCTTTGTTCCAAAAGAATTGACAGTCCGCACATTTTGATACATTGCTCTC
AAAGAAGAAGATAGTTAATGGAAATTAATACctagttggaaagatatttt
tcaaatattttgtaaattaagatgaaaaatgaagacaaaaaagatttttt
ctactaGACCAAAATCTCGAATTTACACTTTTCTTACACTTTTTTCTTAG
ACTTTTCAtttcttgatttatttttcCTGTACAAACTGTTACAATCCTCA
AAAGTTGGATAATCTACTTTGGATGCCTGTAATATCATATCAAAGAACTA
TTTAAAATCtggtaataaaaaaaattatatttattcaaAGGTACTTAGTT
GACTGGTTGGCGTTGATAGGTGAAAAGCTTCACCTCACCCATGGTATGGT
ACACCTTGGTGTCGCACTCATGGATTCTGTCATGGATAAGATGGATTTTC
CAAAGCAAAACCAACTCAACTTGATGGCTATCTGTTGTCTTTACGTGGCA
AGTAGGTAGTAAAGCATTCTTTAAGTTCAGATACTGAGAAGATGTGTTCA
GTGTCTTATTAGAGTGATACCTCATTATAGAATTTCTCGAGactattttc
aaatcaatttaatACAATTTTTGGActtacctggaggtcctataaactGG
TGCAAAAATGCAATACCTGAAATGTAtgggagcccgattttcgaaaaaat
atcgtcccggccacccggccgaaaatgctagaaataagtcagaaaaacta
gtttttacaattttctcAAGATTCCATCATTAGTTGTTTCTGATTATGTC
AGCGTTCCGGCTTATTCTTCCCTTCTAAAATCCATATTGTTAAAAGTAGC
caagtcaaatattttttaattctcaTGAGAAATTACAAATTAGCTGCGAG
CCTTTTTGATgatatttaagatttttaagAAGTCTCTCTCACAGCAATTC
GTCATCATTATCAGAGACAAATGCTTGATTATTTGCATTTTCGATCATGA
CCTGGCTGAACTCCACCAACACTCTGACTTAAGAGGGAAGATATACatgc
attgagtttcaagcccgaagggctagaggcgaaactctaacccttctcag
gcaagagaaattgaagccacttatttcccatccaaaacacgCATAGAAca
cgccgtaatcatgacgacggattgtatctagcggttcatttgttttggac
gactacattttttaaaatctatcgatagattttagtttcaatccggcgtt
tgtgtaaaaactatgcgcgggcgttctggatgagaaataagtggtttcat
ttcccatccaggagtctcacCTCTAGCCTTTCGGGCATGAAACTCAATAG
ATTCATGGTCACACGCCACTCAGGTCTTCTCATGCCAAGataagaatatc
ttttaagTCACCTTGATTTTGGTCTTTTCAGCGAAAGTGGACGAACGAGA
TGATTTGATACCACGTGTGCAAACGTTGAAGTCCATTTTTACCAACGATT
TTGAAGTTGAAGATTTCCTGGAAATGGAACTGAACATCATGTCACTTTTG
GAATGgaggtttgaaaatttcttttcatttgttttttagatCGTTTCACC
AGGTAAAAATGTAACCACGTTTAACCTTTTGAATTGCAATCGGCTGTGCG
TTTTTTGGAAATCCGTTTTGTGAAGTCTGGTCGGAGATTATCTGAGTATA
ACGAACGGGCATAAATTGGAGAATAAAAACTGAATTTGTTTTgggaaaga
aaatgaaatttgatatttagCTCAAGCAGATGTGACGTGAGCACTTTTTC
CACAATTTTTGTCTAACtggtagactagagtctacccTTTGACCTTTATA
TCcttggaccaagctatatccaccatctttggcCGAAGTTTTTTTGCGAA
GCAAGTGGATATTCAATGATAAGaggtacggaggtaatcaaatttgtcaa
atttgtcaagaaaacaaatcaaaactggCCGAGAACCAACAAAAAGAGCC
ATCTTTGTAGTagatttttgcttttgtttacttttgataatttcgacaga
cgattcgaataaaaatgttcgaacgttcgacgaatatcgtttgATCtttt
taaggcaccatttacattaGAAGAACTAGAAATAAAGAAAGAGCGTTGCG
CGGGGCGGCGGACTTGTGCCGCCATGGTTTGTGTGGTGTGTCTGGGGTAT
TATAAGGCTCAAGACCCTGTCTCTTTTGGGGTTTTATCAGAGTgcctctt
attttgctagcaacttgcgaattgaggtggagtctagatcgcttcgcaac
ccttatacaatacggctagtttgaATTGGTAACCGttaagaagccattgc
agtgttaaaaattaacgtctaacggcgctacatcatcaaacgTTTTCGAG
GTAAAATacactattgagtagtgccgccattagggtaccactccgatcaa
agatttttcttggccgggcgggattgagaaacttggtccagggtatataa
aggtcagcgAGTCTACCtctttataatttttgatgacaatGAGTCCTGTG
AGTACTTACTGAGGTCGCCATTCGGAAAGAAAAGAACTAaatatccaaat
aaaaataactacTCTGCGTTGAAAAATTtaacgaaaaatgaaaaataaac
atgaaAAACAGATTCGTAGATTTATTCCTATTTCGTCGATAGCTTTACAA
TATATTGTAAGAACTTAACAATATCATCCCAACACTGACCAATATATTGT
GTAACGTATGTAATAACGATAACAAGTGCTAAAAATTGACCAAGCGTGTC
AAAAATATGTCACGGACTCTGAAGTATGAGGAGTTGCCTCGTAAAATTTA
GTCAGTTAAAATGAAAGTTAAAAGTAAGGGGTTCTATTTTCGACATTATC
AaagacgatgacgtcatcaattggtATTTCACAAGTTAATAAAGATATCT
GATTAGGGAGGATGGGCTCTAGGCTCTACCTCTTCCCGCTCATGCTCCTT
TCCCAAGATTGGTTGGgtaaaacacttaaaatattTTACTCACGAGCGTT
TCAACTCCTCGCTCTTAAGAAAACCATCTTCTAAACCGTATTGGAAAAAT
CCAATCAACATTATACACAGACAAGACGCAACGGGTACGGAAAGTACGGC
GGTCGCCGTATCAGATTTCCACAAAAACCcccgaaattttcctcttcgtc
ggtaaacTCGCTATAAACTCGCTATAAAATCGcctaaatttcctcattcg
ccagatataaaaagcttccgtcgtgcctgaaTATACATAAAGACTCCCAT
ACTTATGAACATTAGGTGATAACCTCGGTCGTGAAAGGATAATGTATTAC
TTTTGTACTGTGTAAAGCAATATCAAAAGGTTTATCCATATTTGTCAATG
TGTATTAAGGGACGTGGAGTAGTAGATCAATAAAACATAACTTCAGTAAA
GCAGTTGTACACATGCGTACGCGTCATATATGCCGAAGCCTGACTAAAGT
CACGCATAGAACAGTAGTATACTATAGAGAAAGGTACTTAGCAAAAAGGA
ATCAATGTATGTTTCAGATTTCCATTTCATCAACAGACGTGGGTAAGAGA
GGGATTGCgaaatctttcgttttcaactTGGTTAAACCGAAAGTGAAAGT
AGATTCATATTGACATTAAAGGTCATCCAGTTAAAGGACACGCAATAAAC
TCGATTataagttttcattttattttataaatcaTTATTATAAAAGATCC
CTAtttaaaaatattgctttatcATGATAagctaaaaaaagaagaaagaa
attttaacaaagatactaaaaaattatttttcccaaaaaatacaGTGTTT
ATGCGTCCATTAAACCAGAATTATTAACGAATTCTTCAAATTCTTGGTTA
CTAGTTTGAGTTTTCAGTGTTTTCTGTGGGACAGTTCAAACTGTGGTCTT
CATTTTCAACAGGTTGTTTGATACATTCAATCTCAACGTTTTCCAACGGC
TCGTCTATCTCATCTCCACTCTTGCACTCATACAATCCCGTCATAACGAT
AAAATTGCTTTCTCCAGGATATTTGATATAAGCTTCATCGCCACTGGCAA
AGATGACAATTCTTTGCTGTGTTGTAAGTTGTTTCTGGTGTTTTTGATCA
TCGGCCATAGTTGTAAAAGTTTTAAAGCATGAAAACCTTCCACACAAGAT
GTTATCTTTGTTCCAACTATCCCGGCTATTACTTTTTCGGTgcataaaat
ttgaataatggTATGACTAATTCAAGATACTACATTTGATGATTCAGCAT
ATAGAACAAAAGAAGAGTAGTAAGTGGTAGTAGTAGACTAACTTGGAAAT
CTCTGTAATAATAGTAGTAGAGAAAGtgaaaaaggagaaaattaCTTATT
AGAActtaatcaaaatttaaaaaataaatataagaaTAATCTGAATAATA
CCTCTATCCTGTTTTTATATAATGATGGTATCCATTAACAAGTTCTGCTC
CTTTAAATTTGCTGccaaataaaatcaaactttactcgattattatttca
tttttaaactaTTCAATCTTATAACGgtataaaaacaacaattttcttat
gaaaaatagaTATGGATAGCTGTAAGGGAAAATTTTAATCGACCGATTGG
GATAAAATAAACTTATGTAAGCACGGAATTTGAAACTCATTTCTGTTGTA
TTTGACAATTCAGAGTACAATTTAAACACTATTGATTGTAGGTATCTAGA
TTGTGACGACTTTAACTTTGCTTTTTCTAAtacatatgtttttttttaat
aagcataacgcttataagcatatgaaggctcagatttgcagatttcctaa
gcataacataagcatatacgctagcctgaaatatttttcaagtagtCAAT
CTCTTTCTATCCAAAAAGGTTTGTTTGcaagtggtcaagtaaaaaaagac
attccacggctagccacattccactgctcaaaaatttaaatgctttttga
atcgaatataaacaaaattttaaagattttactaaaaaatttggtagggg
tgaatcaaaagcataataattcttaagcatataataagcatattctatgt
ctggatgctttgaaagcttTTAAGCATACTcaagcctgaccaaggggcat
acacttgcttataaaaaaaaaaaacatgtacatctTCACACCTCTCTTTT
CTTCACTTAAATATCTggtgggagtttctaaacatcgaccagaaatggcg
accacgaccagcgaccacgaccggcgaccagataaatttgggttatcgag
tttttcctctttctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttagaaaatc
catgcctaagttgggttaaaactgcttgaaaagaagaaaaattgtagttt
cttgtcatttttttccaaactgaggctgggcatgttcattacgatgttct
taatttttcgacgaatttcagcctaaatgttcttatagactgggttctaa
taaaaaaaaaacgtgtaattgatGAGgttgatatctctaaaactgccctT
CCCAGGGTTTGCCTACTCacaatttctatctattcatactaaaagCATCT
CATTCGGNAATATCTGCTCTTTACCGAAACATTTTGATGAGTATAATAAC
TTCTTAGAAACATTAAATCACGAATTCAAAGACTTAGGAATTTCGGAATC
TAGGCTTATTTACAAAAAGCTAACAAGGAAATAAGCGCCTTGTGCTTATG
GGTAATTTTAATATCAACTTGCAAGAATGTGGTACCTCTCCACATGTAAA
TAACTTCGTAGACTCTCTTGaatccttttttcttttacctagtATTTCTC
TACCTACCAGAATCACTGATAGGTCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTTTCTTCACTCCTTCTAAATACAAACCTTTAACA
GGAAATCTTCTTTCAGGTATTTCTGACCACTTGCCTCAATTTCTGATATT
tgagaattttcattttaaggaaacaaaatattacaggatatggaaaaatt
ttgatgacaatAAATTCAAAGAATCCTTTTACAGAGTAGACTGGAATGAC
ATCTTGCATTCTGACTCGGATAATCTAGATCTTCTTTTTAAGAGCTTTTT
TGATCGAATGAATACCCTAATAGATATACACGCACCTCTGCAAAAACTCA
CCAATAAGCAAATTAAAAAGGGAGCTAAATCTTGGATAACTAAAGGCATT
AAAACCTCTATTGCTAAACGAGATCAACTCTTAAAGGCTTAAACACGCGA
GAGAAGGACAATACTATTAAACACCAACTCCACATCAGATATAAATTCTA
CAGAAATCAAATTGTTAAGCTCTGTAGAAGAAGTAAGAATAACCATTATA
AAAAGTACTTCCAAACAAATATAAAGAACAGTAAAAATATCTGGAAAGGC
GTATACGAAGTGATCGAAAGTAAAAAATGCCGTAGTAGCACAACAATATC
TCTAAATATTGACGGACAAGTAACATCTGATCCTAAAGTAACAAGCGAGG
AATTGaataaatacacgtttttttttatataaggaaccttaactttgctc
tgagcctggagttccttatttttacagaaaatttcagcctcaaagttcct
tttgAGTTCCTTNCTTCAAAAACCAATTTGGATTCCGTAATAAACACTAT
AAATACTTCTCACGCATTAATAAATCTAACAGAAAAGATTCGGTCAAATA
TTGACAAAGGGTTGTATTCTTGCGGGGTATTCATTGATCTTCAAAAAGCT
TTCGATACAGTAGATCATGAAATTCTTCTATCAAAACNGATTACTTTTAC
TGTTCCTtagaacttgttttcttattcttagcctgagcagttccttaaca
attccttattttttggaccattttcagcctcgagttccttataaacgtgt
tccttataaaaaaaaaaatgtgtattttacttCAATACCCGATAAAATAC
GTCAAACTATAAATGTTTATAATAATGAGAAAGCGAACTTTCATCCAACT
CTTGTAAATTCTCCAATAAATTCTCTGTTTTTCGAGGAGATAAAAGCTGA
GGACATCGTAAGAATTATCAATGCTCTTAAACCTAAGGAAAATGGACCAT
TCAGCATTCcaccaaaaatcttaaaatcggttCTTGGTGAGGTAGCTCAA
CTccttgctaaaattttcaatttatcaaTACAGACATGCAAGTTCATAAC
AACTCTTAAAGTAGCAAAAGTAATACCTGTGTAAAAAAATAAAGGTTCCC
CATACGATCCTAACAACTTTAGACCAATTTCGCTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGCTGACGACACCTGTCTTCTCTCTTCCGATTCGAATC
TAAATTCACTTGAGACGAAAGTGAATTCTGACTTAATCAGACTCTCCTCT
TGGCTTCGTGCCATCAAAATCTCTCTTAATACTACAAAAACTGAGGTTAT
CCTGTTTAGAAGTAAAAATAAACCTTTACCATATACCATGAATCTCAATC
TTGATGGGCATGTCTTGAAATTTTCGAAATGTGTCAAATATCTTGGTCTT
TTTCTCGATGAATGTCTAGCGTGGAATTTCCATTTTGATCATTTATCCGC
AAAACTTAGAAGGTCAAATGGCATTTATCCAAACTGCGTCACTTTGTTCC
ACAGACCATTCTTAAAACTTTATACTATGCTATATTCCACTCTCATGTCT
TACGCAATAATCGTATGGGGGCAAAGTCTCACTCAAAACTCTAGAAtagg
caaacttcaaaaaagatgCGTGCGCATCTTGACTTTTTCCGATTTTAATG
CAGAATCTGCTCCTCTTTTCATTAACCTGGATATTCCAACTTTGCCACAT
ACTGTAACAAAGTTCAATATCCGACTCGTACATCAAACTCTCACTAATCT
TTCTCCTGAAAGTGTTACGAACATTTTAAACTTCAAAACTCTGTCTCATA
ATTATCTTACTAgaaataacgaactgaaacttCTGGAGCGCCCAAAAGCC
AAAACATTAAACTATGGATTGAAATCGATTAAGTACCAATCTCTTTTAAA
CTGGAACCAGCTAATATCACATACTAAAATCGATCTACAACCATTATCTG
GATTTATTAACTGGTTGAAGTAAAAGCCGGTCAATACAAGAAAATAcgct
attttgattggttctctAGCGGTCAATATATTACGGTAAAGACCACTTCA
GTGCTTTGGTCAAATTGACgatgattttgaaaaaggaaatttgttttata
gaaaagtttcgtccgtttgaacatgatttaaaaaactGATTTGCAACGAC
TTCTCATAAGAAAGGGACGTCAgaataaatcaaagaaaatattgggtaaa
aaagaaacgaaaaaatcatggaaaatgAGTCGAAAATGCATTTTTTGGCC
AGAAACACACAAAGAATGTTCACCAGTGTTAATAAACACAATAATATAAC
TGTTTTCTCGGTCAATacgtaaaatattgaccgcACCCGAAGTacagacc
gagcttgcgaggtctgTGCGCAGGATAAGGTCAATATTTTACCGTATTGA
CCTCCAAACCagttattattgtattaatattatcaaaaaaaagataagcg
aattccttcaaaattgacctcttgCATACCAGAAAAATGAAAGTCCATAT
AGATATAAAAATACTCtaatttgatttattaaaacaaaagattactTATA
TAACTATATTTTTTTTGTCGATAGTTACGttgcgttttttttttattttg
ttatttggaatattgaaatattgttaCTCTAATAGTTACCGTGGCTTGTT
AGTGCCATGTGTAAACTACTTATACTTAGAGGTTCTAAGTCGACTTAGTA
GTGCTAAAGTCAACTTGGTAGTGCTAAGTCAACTTAGAAGTGCTAAGTCA
ACTTAGAAGTGCTAAAGTCGATTTAATTGCCAAGTTGATAAAAGGCGCGG
GACTCTCTCTGGCATGTATCtagtgaaatttaaaaaaggtctGGACCCGA
agcaaaatcgaaaaaattgcATATTGTGAATTGATCTTACACAGCAACCA
AACACCACCACCACACAACACTTTCTTGATCTTACATTACACTCGTTGTT
CTGCTTTAACTGCATATCATGACCTCGGCCACAAAACATGCCCATTATTG
CCGTACACAACACTATATGCCCACCTCTGCTTTTCACATCAATATGTACC
CCTTTTATATACACAACAATGGAAGGCCCGCTTCTTACGGAGTTGACTTA
TGACTTAGTACTTCTAAATCGACTTAGTACTTCTAAGTCGACTTAGTACT
TACTTATAAGTTTACTTACAACTTAGCTCTATCAAATCGACTTAGTACTT
GTAAGTTGACTTAGAACCTATAAGTATAAGTAGTTTACACATGGCACTAA
CAAGCAACGGTAAATAGTTATATCAACCccacagaaaaaaaaatctgcgt
CCAGGTAGCCATTCCATATGATTAGACGGAATTTTCTATTGGATGGACTC
CTGGCCTGCAATCCCTCCCTTGatttatacaaacttaaatatgtaaattt
ttaatgatatgcaggCGAATAAATAAGTTTGAATTGAATTGTATTTCGGT
CATGCTTTTGCTTAGCTAgacaaattcgaaaaaaaattcttagaatTGTT
GGATTCTCGGAAGTATCAAATTAATTTTCTCAATAATATTCTTAGACATA
ATATAGTTATAAACTTTTtcagggaattccccttttttaatttcgcctta
gcgaaaaATATTACAATAGGCATTCTGTGTTTTTGATGaaagaaatttag
aaaacgaaagtactcgatacggtggacgaaccaatgaagtataagcccga
aggcagttgtgttgaagtttttataagatgctcacataattgaTTAtcca
aaacaatagagatgacgcgttctttagaaaaatataataaaagtttttgt
ttgaatagttaacgaccaatccaatgacaaaaattcttgtaaaatgttca
tcttgaccccccgaagggctagaatcgaatctccttggtacgatttgaag
ccaacaaatcctaccaaagttgcgcggccttgagcggctcgcctggtttt
tacacaaatgacagattgaaaccaaaatttaccgctaaatttgaaaaaaa
atatcaatcgtaaacaaaggaattgctagattcaatctgccgtcaaaaat
acggcgcattttttaaggcttcactttttcttgtctgAGAAAGGTTAGGG
ATTTAACTCTAGCCCTTCgtgctttaaactcaatgggacGAACACACTAA
ATTATTGTTCACTAGTTTCTATAAAACCATGCACGCTTTTCGCGCATTTT
TTAGCCTTCATGTCTTGATAGACGAGGATATactgtattacttcgaatat
acgtcccccttcttttaaacgccccctcgaataaacgcccctcgtttaag
gaaaaatttttgtttgagtTTGTTTGGAACAAGTAGCAGTAAGTAGAAGT
ATGATATGAAGGAAAACTTAGATATACGATAGTAATTGTATTCTCTCGGT
ATTCGAACTAATTTTTACCCATTTCTACATTCCTACATTGACATAATTAT
TTGTACGATCAAGTGATAACTGAAAAGGTAAAATAAGGTTCCAATTCACA
TTACAAAAGGGACCTAGCTTATAattcaataaacgcccccttcttttaaa
cgcccccttgaATAAACTCCCCTCCTaaaacccaaaattttgtcgagCAT
CCGTTTATCCGAAGTAATGCGgcatctttcggtaattaggtTAAAAGATC
AACAAGAGACGGCGCTCAATAATGAGAatattaatttttcttataagcat
ctactttataagaatcaaatcaatagctcttgatagacggtgatatacct
ttcggtaattagttcaaAAAAAAGATCTGTATTTTTTCCACCTAAACTAG
AGGTTTTTTCCACACTTCAACATCGATTCCTGATGGATGAGGACGCATCA
GCTGACACTTCCATAGAAGACCATCCCAGTCAAAATTTCGACGATCTCCG
ATGCTCCGAAGCGAAATGTTACGGTTTCGAAGAAAACATCTTAGTATATA
TGGCATGTGAACGTTTTGTGCATTATAAATGGTGAAAGACCCTTCACAGG
ATGAGCCCAATACTCGATCAAAGAGGTGATTAAAGAAGCTCTGCGGGAAG
AAGAAGCCGAGGAAACGAACAAACAGAAGCGTGCTTCGAACATTATTGTT
CATGGAGTACCAGAACAAGATGCCAACACGGACAGGAGCTGGGTTGAGGA
TCTCATTAAAACAACCCATTCAAACGTTACCATCAAGCGCATTGCCCGTT
TGGGTAAGACCTCGAACGATAAGAAGCGTCCCATTCTGATCTGCCTCTTG
AACGAAGACGAGAAATTCAATCTTCTTGGAAATTTACCAGCTCTGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGT
GAGCGTTACTGAAGATCTTACACCTGAAATGCGTAAGAAATTGCGCCTAC
TGTCTATTGAAGCTAAAGAACTTAATGAAACCGAAAAACCAGCAACAGAA
ATATTATCGCGTCCgggttgattaaaaaaaacggCTTCACTGTCAAGAAG
GTACCACTCAGAAAACCGTCAACCCCCAACCAGTCACCAACAATGAAAAA
TGTCTCCTTCTCGAACAACCTAACGGAGACAAATATCATCGACCAACAGG
AGCCAACTTtgctcaaaaagaaaaattaatcaaatatATGAAAGTTCTGT
ATACAAATCCCGATCAGTTGACTTCATTTAAAATGAAGGAATTACAGTCC
ATGGCCCATGAGGAAAAGCCTCGCATCGTCGCAATCTGCGAAGCGAAGAC
AAACGTAGTTACGTTGAGGGAATTACATGAATACGAATTCGATGATTATA
AAATTGCTAGTCAAGTTAACTTAGACACAGATAAAGGGCGTGGCGTTGTC
ATACTTGTTCACACCTCGATAAAACCTTTAGTAGCCGATGTCAAACCTCC
AATCACTTTCAACGAAGTATGCATGATTGAAGTACAATTATCTGGAAAAG
AtttgcttgttgtcacgtgcATCTACCGAAGTCCAAGCAGTTCTACATCA
TCAAACGAAAATAACAGCAACCTGAATTGCATGATCAAATCTATTGCACT
GAACAACAATTATTCCCACAAATGTTTGCTAGGAGACTTCAACTTCCCAA
CGATAAATTGGGAAAATTGGACAACCCCACACATAGAAGATAGTAAAGAA
GAAAGATTTCTAGATGCTTTGAGAGCTGCATATCTTCATCAACACGTTGA
CGAGCCAACTCGATGTCGTGGAACAGATGACCCATCTCTAATCGACCTGA
TATTGACAGGGGAAGAAAATCAAATAGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
TAGCTCGTTAGCGTTCAAATTTGCTTGTTACGCTGACCCCAAAAGTGTAC
AGACAAGATATATCTTTGCATCGGCCAATTTCCAATCGATGAATAACGAT
ATTAGCTTAAGAAACTGGAAACAAAGTTTCAAGAAAGCATCCGTGGAAAC
ATCAGTGGATGATCTTTGGAAAACTTTCAAAGAAGCTATACTCGACCTCA
GAAATAGGTTTGTACCACTGAAAGAAGTAGGTAANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAAGGCAAAAT
CCCTATCAAAAAGGACCTGCGAGATGAAATCAAGAGAAAGAAATTGCTGA
ATAGAAGGTGGTTAAGATCTTCACCTCTCTACCGAGATCATCGCCGCACC
AATTATGTACTCGCAAGGAATAGAGTAAATCGAATGCTGGTGAAGGCACA
TCGGGCATATGAGAAGAGTATCTGTGACAAATCCAAAGAGAAACCCAAGA
TCTTTTGGTCTCACGTAAGAAGTAAACTCAAATCAACAACTGGAGTTTCG
CCACTTCTTCAGAACCCTGACGATAAATCGTCTCTTAAACATGACGACCA
CGAGAAGGCAAACATCTTGCAAAAGTAGTTTTGTAGTGTCTTTACTGATG
AGCCAGAGGGTGAATTACCAGATTTCCCTGcacaaacagaaaagaagatt
aGTGATCTATTCGTCACCGAGGAGATGATGAAGAAACAGATAAAACTGAT
TGACACCAACAAATCCTTTGGTCCAGATGAAATTCATCCCAAAANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTGGTCGACCACGTA
GCCGAGCCTTTGGCGATCATAATGAATAAAACCTTGTCGTGTGGAATCAT
ACCGAAAGAATGGAAGATGGCTTACGTTTCGCCAATATACAAGAACAAGG
GTGCTCAAAATCTAGCAATAAACTATAGACCAGTCATTCTGACATCAGTT
GTTTGTAAATTGATGGAATCATTTCTTAGGAGGCATATCATGAATCATCT
ACAAGATCAAAAACTATTGTCAAATAAATAATACGGCTTCATCAGTCACC
GATCAACAGTTACTCAACTCCTGAACTTCTTGGAGAAGTGCTGCGAAAGC
ATTGCTAATAGTAAAGTAGTTGATACGatatatttcgattttgctaAAGC
CTTCAATACTGTTCCCTACCGTCGCTTGCTGAAGAAACTTGAAGGATACG
GAATATCAAGTAACTGTCTACGATGGATAGAGTCTTTCTTGACAGACAGA
AAGCAACTCGTAAAGGTCGATCAAGGTCGACCAAGTACAAACTCCGTTGT
AAGtggtattcctcaaggaagtgTCCTTGGACCACTTCTCTTTGTTATCT
ATATCAATGACCTCCCGGACAACGTCATCTCATCTATTTTCCTATTTGCC
GATGATACGAAGATAGTCAAAGAGATCAACTCAATCGAGGATTCTTTGAC
AATCCAACATGACATCAATGAACTCGAAAATTGGTCGAGaaaatggcttt
taaaattcCATCCAGATAAATGCCATGTACTAACTCTCGGGAAATTCGAG
AACATCATCCATGCACACCCATACTCGTTAGATGGAAACCAACTTGAaca
cgtttcccttgaaaaggaTCTAGGTGTGCTGATCGACTTCGATATTACCT
TTGAAGAGCACATATCGAAACAGGTCAAGAAAGCAAACTCAATTCTCGGT
GTGATCAGAAGAAGCTTCGAGGAATTATGTCCCATCTTTGTTCGACCTCA
TCTGGAATATGCTCAATCTGTATAGTCACCTAAATTGCGTAAGCACGTCA
ACCTACTTAAAGGGGTTCAAAGGCGTGCAACAAGAATGGTACGTCGTCTA
CGAAATTTAACATATGAGCAGCGCCTGCGAAAACTGGACTTACCATCTCT
TGAATTTAGGAGATAATTTGGCGACATAGTTCAAATACAGTATACAAACA
CCTTCACTTCTATGACAAAAATACcatcgtcaaaaagttttctcgcCGAA
CTCGTCCCCATCGTAAACATGATTACGAATTGATTCCTAATTTCTCAGAT
GATGGATTAAGGGGTGtgtaaacaaaatcattttatcaTAGATGCATACC
GGCGTGGAACCAGCTCCTAAAAAATGTTGTTAATGCTAAGTCAATCAAAG
CATTTAAAGAAGAACTGACTCAGGCATGGATAAAGCACCCGTTACGTTAC
GATTCAAGATCACTTTTGTAATCATTATGTAGATAgaccggtttagaggc
cctagtgtgcctggactgtaaatcctttaataaaataaaataagataaaa
ataaaataaaaagtaaacaagggatggcgtacaatatgagcatatttatc
tttattataagcatctactttataagaatcaaatcaataactcttgatag
acggtggtatacctttcggtaattaccttatcggccctttttacaccggc
ccttattggcgtttttttgggctcgtggcgtaataagggctggCGTTAAA
AGGATCGGCGTAAAAAGGACCAAGATTTTGCATTTTTAACCTAACCTAAA
cggcgttaattttttatcattatttctcaatttaaaggaaatTAGTATGA
TTCAAAGtcgaaaattatccattgttttactccatatttaaaacttcagt
gaattatttaatatattcaaaaatcagtgattgggctattccagaaatag
tctgtacccctgTGTAGTCTGTATGTTGAGGAGGTGGTCagcaaaatatg
gtcaaaaatccagggtagtcagtaaaacgaggtcaAAAAGGTCTGACTGT
AGGACTGCAGAGATATATGTTGAGGaggtaaaatccagggtagtctaaaa
attgaaaaaaatccagaGTAGTCTAAAAGATGAGAAGAAAGGGGGTGTAG
TGTTGGAAAAATCCAAGGGGGCTGTGGttggaatagcccattttcGATGG
AATCTttaacagtttactactgaaaaataaatgacatttttgaagcataa
gtagccatttttccaaattttggcgttattaacggccctaattggcgtaa
gcccaaaattagactgtggcgtaataagggccggcgtaaaaggcaCCGGC
GTtgaattagggccggcgtaaaaagtgCCGATAAGGTAGTTCTTACAAAT
TTAATAGAGGACGGTGCAAAATATGAGAATGTTAATCTTTCTTATAGGCA
TCTACgttaagaatcaaatcaatagtaACTTTTAATAGAAATCACATTTC
GTTAGTTAATGCTTACAAAATAAGTATTCAAATATTCTGAAATATTAACT
GCTAACTTGTGCTAAACGCATGTTCCACATCGTTGTACTGGTTGTAACAG
TTTTAACTTGATATAATATCAGAGAGGTAGAGAAAATGTCACATGATCAA
ATacctttttatcaaatattttgactttgatgCTATAATATAAAAAGGTT
CTCCAGACACGTCTTTTTACATTGAAGTGTTATGCATTTTTCTCAACAGG
TTACTTCTACCTACACCAGTTCATTTTATTGGTTTCTACCTGGAATATTC
TATCGACGAAAATGACAAACACAGCGGCGAAACAATCACACATCCTCAGA
AAGCCAGAATGTACTTGCGAAAATACACCATGTATTTCCTTGAAGTTGCT
CTACAAAGTAAGTTTCTGTATTCtgacttttgtttttttaagtttattgt
tacattttttctccatttttttgGCTAATTGGCATTTTCGAGTCCATTTT
CAGCCCATTTTCGGGCCCATCTACGCTgacccgcgaaattaaattcgcGC
AAAGTTTTTCAAGCTctcgaaaaaataaatattgcaaaaatcATTCCGTA
AAGTAACAAGTTTCTTGCTGCTTTCTTCCAATAACTTAGGAGGGGCAAAG
TACTTTCAACACAGCATTTCTACGTTGATTGATCATAAAATAAGAGGAAT
TAAATAGCTGATAGTTCTAGTTAGTTATGTATAACCTTGAAGGGACATGC
TCTAGAGAAAGTCCGGTTAAACACATACAAGTTAAGATAATTGTGAATTA
GTAAAAACTTGCCATTAAATGTCTTGTGGTGATAAAAGATTTTTGCGTGG
TCGTCTTTTAGCATTATTTCCCATATAATTAGTCACTCCCGACACAGTTT
TCACTTTTTGGACAGTGATCTTATTCTCATATTGGTCTTCAGTTGACAAA
TGGTGAGATTTCTTTTCGTTTTCCTTCGCTTTAAGATCTGATAACCTCTT
GAATAATTCTCCTCTTTTGATGTGCTCGACGCGGATTCCTTCACGAGTTG
ACTTGATCTGATCGACCGTGTCTTGTATCCGTCGCCTAGCCTGTGCGATC
GATTTATTTAAAGCTTTCTTATCTTCTCCGTCTGGCCGATATGAATCCGC
TTCTGTATTTGGCGAGTCGTCATCGTCAATCGGAGATGAACTTTGGTACA
TTTGTATCGTTTCTTTGATTTCCGTTGTTTTGAACATGACTTCTTTTGTT
AGTTTATTAATCTCCTCGATCGATTTGATCATGGCATTTTTGTTCCTTTC
TCGTCGCCTTTCCTCGTCCATTTTTCTCTAAAAGAATAAACTTGTTTTAG
AAGAGTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008653XLOC_008653Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015504-exon-sc0000212-1491911889:124424..124574TCONS_00015504-exon-sc0000212-1491911889:124424..124574Clytia hemisphaericaexon
TCONS_00015504-exon-sc0000212-1510915933:124424..124574TCONS_00015504-exon-sc0000212-1510915933:124424..124574Clytia hemisphaericaexon
TCONS_00015504-exon-sc0000212-1575043694:124424..124574TCONS_00015504-exon-sc0000212-1575043694:124424..124574Clytia hemisphaericaexon
TCONS_00015504-exon-sc0000212-1491911889:125214..125374TCONS_00015504-exon-sc0000212-1491911889:125214..125374Clytia hemisphaericaexon
TCONS_00015504-exon-sc0000212-1510915933:125214..125374TCONS_00015504-exon-sc0000212-1510915933:125214..125374Clytia hemisphaericaexon
TCONS_00015504-exon-sc0000212-1575043694:125214..125374TCONS_00015504-exon-sc0000212-1575043694:125214..125374Clytia hemisphaericaexon
TCONS_00015504-exon-sc0000212-1491911889:126305..126431TCONS_00015504-exon-sc0000212-1491911889:126305..126431Clytia hemisphaericaexon
TCONS_00015504-exon-sc0000212-1510915933:126305..126431TCONS_00015504-exon-sc0000212-1510915933:126305..126431Clytia hemisphaericaexon
TCONS_00015504-exon-sc0000212-1575043694:126305..126431TCONS_00015504-exon-sc0000212-1575043694:126305..126431Clytia hemisphaericaexon
TCONS_00015504-exon-sc0000212-1491911889:142923..144031TCONS_00015504-exon-sc0000212-1491911889:142923..144031Clytia hemisphaericaexon
TCONS_00015504-exon-sc0000212-1510915933:142923..144031TCONS_00015504-exon-sc0000212-1510915933:142923..144031Clytia hemisphaericaexon
TCONS_00015504-exon-sc0000212-1575043694:142923..144031TCONS_00015504-exon-sc0000212-1575043694:142923..144031Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000212supercontigsc0000212:124424..144031 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	5.57012	5.03758	36.8842	39.4618	43.5758	39.1411	24.0552	30.8573	0.263245	0.0709018	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
[Close]
BLAST of TCONS_00015504 vs. Swiss-Prot (Human)
Match: CCNJ (Cyclin-J OS=Homo sapiens GN=CCNJ PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 7.074e-32
Identity = 72/183 (39.34%), Postives = 109/183 (59.56%), Query Frame = 3 
Query:   63 IVDDTHKVLREKERSTPKFQGNSPQLCFRRYLVDWLALIGEKLHLTHGMVHLGVALMDSVMDKMDFPKQNQLNLMAICCLYVATKVDERDDLIPRVQTLKSI--FTNDFEV---EDFLEMELNIMSLLEWRLLLPTPVHFIGFYLEYSIDENDKHSGETITHPQKARMYLRKYTMYFLEVALQ 596
            +  D H+ LR KE   P ++G SPQL  RRY  D +A++  +  L     HL V L+D  MD+ D   Q QL+L+A+ CL +A+K +E++D +P+++ L S+   TN   V   ++ L MEL ++   +W L LPT  HFI +YL  ++ E D H G  +   +K ++Y+ KY  YFLEV+LQ
Sbjct:   12 LAADIHQALRYKELKLPSYKGQSPQLSLRRYFADLIAIVSNRFTLCPSARHLAVYLLDLFMDRYDISIQ-QLHLVALSCLLLASKFEEKEDSVPKLEQLNSLGCMTNMNLVLTKQNLLHMELLLLETFQWNLCLPTAAHFIEYYLSEAVHETDLHDGWPMICLEKTKLYMAKYADYFLEVSLQ 193
The following BLAST results are available for this feature:
BLAST of TCONS_00015504 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCNJ7.074e-3239.34Cyclin-J OS=Homo sapiens GN=CCNJ PE=2 SV=2[more]
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