TCONS_00015491 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015491
Unique NameTCONS_00015491
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length440

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015491 ID=TCONS_00015491|Name=TCONS_00015491|organism=Clytia hemisphaerica|type=transcript|length=440bp
aTTTGAGCTTCCAAGCATTTCAAAGATACCGTAGGAACAATCCGGGAAGT
CAGTCTGAAAATGCTCATCATTTTTGGCGATTAAATGGCGGCAAGGATGA
GCCCGGTTATGCACCGAAGTGGCGGCGGCAACAACAACAACGTCGCCGat
taaaactgaaaactgaaaataataagaCTTCAACATCCAGATCCAGATCT
CAAGTTTATTCGCGTCCTAGGCCAGGCGCAAAACACTATTCTATAACTGT
CGAAAAGGGGGCAACTCTCAACACGAGCTAACAAACTTGCTTTTGTTAGC
TCTATTGCCAATATCGTCAATTCAAGCTTTTGTTATTGTTCAACTTGAGC
CTTATTTTAGTATGAGAGTTGCCCTCTTTTTGAGTTActctgttgttgtt
tttttattattttctcattcttgaTTGGTTTCCCTTCGCA
Run BLAST on NCBI

transcript from alignment at sc0000211:424962..425401

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015491 ID=TCONS_00015491|Name=TCONS_00015491|organism=Clytia hemisphaerica|type=transcript|length=440bp|location=Sequence derived from alignment at sc0000211:424962..425401 (Clytia hemisphaerica)
TGCGAAGGGAAACCAAtcaagaatgagaaaataataaaaaaacaacaaca
gagTAACTCAAAAAGAGGGCAACTCTCATACTAAAATAAGGCTCAAGTTG
AACAATAACAAAAGCTTGAATTGACGATATTGGCAATAGAGCTAACAAAA
GCAAGTTTGTTAGCTCGTGTTGAGAGTTGCCCCCTTTTCGACAGTTATAG
AATAGTGTTTTGCGCCTGGCCTAGGACGCGAATAAACTTGAGATCTGGAT
CTGGATGTTGAAGtcttattattttcagttttcagttttaatCGGCGACG
TTGTTGTTGTTGCCGCCGCCACTTCGGTGCATAACCGGGCTCATCCTTGC
CGCCATTTAATCGCCAAAAATGATGAGCATTTTCAGACTGACTTCCCGGA
TTGTTCCTACGGTATCTTTGAAATGCTTGGAAGCTCAAAt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008648XLOC_008648Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015491-exon-sc0000211-1491911889:424962..425401TCONS_00015491-exon-sc0000211-1491911889:424962..425401Clytia hemisphaericaexon
TCONS_00015491-exon-sc0000211-1510915933:424962..425401TCONS_00015491-exon-sc0000211-1510915933:424962..425401Clytia hemisphaericaexon
TCONS_00015491-exon-sc0000211-1575043694:424962..425401TCONS_00015491-exon-sc0000211-1575043694:424962..425401Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000211supercontigsc0000211:424962..425401 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.43075	0.34779	0	1.10249	0	0.40694	0.874914	0.638062	2.98433	0.736808	2.09837	1.21129	0.522964	0	0.143424	0	0	0	0	0.366373	0.20424	1.7378	1.44044	0.0784448	0.58895	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015491 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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