TCONS_00015473 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015473
Unique NameTCONS_00015473
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4028

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015473 ID=TCONS_00015473|Name=TCONS_00015473|organism=Clytia hemisphaerica|type=transcript|length=4028bp
CAGCGAGGAGCCAGCGATGATGTACAACATGCTTCAATGATTAAGAATGG
TCTTGGCCATCGAACAGATGAAGAAATACTTCAAAATTTGTTCAGTCCTT
ATGGAGAAATTGTTAATGTTAAAGTTGTTAGGGATGCTGGTAATAATTCA
AGAGggtttggttttgttttattCAAAGATAAGTCTCAAGCAGACGCAGC
TATCAGAGCATTGCAAGGTCACTGTGATGGGTATGGTATGGACCTGCAGA
TAAAATATGCCAAAGAATCTTCAGAGCAACAGAGAACCCATCAAAGGTAC
AAAGAGTTTGTAAGATCAAGTTACCAACCAGTCCAACCTGTCACAGTGAA
TTATAATGGGGATTATGCAACAGTTGTCCCTGTCGGTAATGCTCATCAAA
TCAGTTATCCAACAAACTCTTATGGTGGAGGGTATTCACCAGTTGAATAC
CAAAAACCTCCAAGAGGTAGAGGTATGGTTGCCACAAGGTTCAATCCTAT
TGCGAGGCCTGTTTCAAATCCTGGTCATAATGCAGGAATGTCAATGGGAA
TGGGAGGAGGCCTTAATGAAGGTGCTCCGAATGTTGTTTTCGCATACAAC
ATAGGTCCAAATGCCACTGAGGGAGACATGTATGcacttttctcaaaata
tggTCGGATCAATAAGGTCGATGTTGTCGCAGGGAAAGGTTATGGTTTTG
TGCACATGCCTGTTTTTCATGAAGCAAACGAAGCAGTGAGGGCGTTGAAT
GGTGCATTTTATAACGGAAAAAGTCTCCAAGTGTCAATTAAAAGGCGTTG
ATCATTAGGATTTTAGTGGCTTCTACAGAGTGTGGCTCATCTCAAGTGCA
TAAAAATGCTTTCCTTTTTTGAGTCATTTGTTGTACTTTGGCTTAATTAA
GATTATTTAAAATGGCTAGAACTATACATTTTGTGTCATGGCTTACCGGA
CGTTTATTGAAGAGCTTCAAATTGGTGATTGTTGCATCCGTCATTTTAAT
GTCGTTAATTCTTCTTATGATGAAGGACGCTGATCCTCCCCCTGGTGAAA
TCAAAGCTACAAAACTCTCCAAGTTGTCATTTGGTGAGGGAACACAAAAG
ATGCTAAAAAAACTTCATCCTTTGAAAACAAGAGGTGTTAAAACATCTGA
AAGTGTACGGCAGGATGAAAGGCCTCCTTTACCAAAACAtcctttgaaaa
ttgaaaatgttcaaattgAAACTGAGAAAAAAGTTCAGCCAACACAGGTT
CTCAAGGAACCTATAGCTGACAAACAAATGGATCTGAAGGAACCTAAGGA
GAAGCCTTGTTATCACATACATACTTTCTACTACCCATGGTATGGTAACC
CCAAGTTTGATAAAGAATACATACATTGGAACCACCAGCTGTTACCACAC
TGGAACCCACAGGTGGCAAAGCATTATCCAAAAGGTGTACACCAGCCACC
CGATGATATCGGTAGTGATTTCTTCCCTAAGTTAGGAGCGTACAGTTCAC
GTGATCCGCATGTTATTCTTAGCCATATGCAACAACTATCTTCTGCAAAC
ATTGGTGTTGTCATTGTGTCTTATTATCCACCCACTCAAGGTGATGACAA
TGGAAAAGACTGGCAAAATGTTTTCCCAATCTTGTTAAAGACTGCCAATG
ATTATGGAATCAAGGTTGGCTTCCATATTGAGCCGTATAAGAATCGAAAT
CAAAACACAGTGAAGGATGATCTTATACATATTATTGATACCTATTCACA
TTATCCAGCGTTTTTCAGGTATGACTATAACGGTAAATCTCTTCCCATGA
TTTATATTTACGATTCTTACCACACTAAACCTGACGAATGGAGTCAAGTT
CTTTGGCCCAATGGGAAAAACTCTGTCCGAGGTACCAAGTATGATGCTTT
TGTCATCGGTTTATGTGTTAAGGAGAGTGACTTGCGAGAATTGAGACGTG
GAGGATTCGATGGTTTTTATACATATTTCGCAGCAAACGGTTTCACCTAT
GGATCATCCAGAAGAAACTGGCAAAATTTGCATGATTTTGCGAAGCGATT
TAACATGATTTTTATCCCCAGTGTTGGTCCTGGGTACGTGGACACCAGAA
TCAGACCGTGGAACGGTGAAAACACAAGGAACCGTTTGAAAGGTACTTAT
TACAAAGACTCGTGGAAAACTGCTTTGAAGTTTCAGCCAAGAGTCATTTC
GATCACTTCTTTCAACGAATGGCACGAGGGAACACAAATTGAGAGGGCCA
TACCTCACANCCCCCTGGTGAAATCAAAGCTACAAAACTCTCCAAGTTGT
CATTTGGTGAGGGAACACAAAAGATGCTAAAAAAACTTCATCCTTTGAAA
ACAAGAGGTGTTAAAACATCTGAAAGTGTACGGCAGGATGAAAGGCCTCC
TTTACCAAAACAtcctttgaaaattgaaaatgttcaaattgAAACTGAGA
AAAAAGTTCAGCCAACACAGGTTCTCAAGGAACCTATAGCTGACAAACAA
ATGGATCTGAAGGAACCTAAGGAGAAGCCTTGTTATCACATACATACTTT
CTACTACCCATGGTATGGTAACCCCAAGTTTGATAAAGAATACATACATT
GGAACCACCAGCTGTTACCACACTGGAACCCACAGGTGGCAAAGCATTAT
CCAAAAGGTGTACACCAGCCACCCGATGATATCGGTAGTGATTTCTTCCC
TAAGTTAGGAGCGTACAGTTCACGTGATCCGCATGTTATTCTTAGCCATA
TGCAACAACTATCTTCTGCAAACATTGGTGTTGTCATTGTGTCTTATTAT
CCACCCACTCAAGGTGATGACAATGGAAAAGACTGGCAAAATGTTTTCCC
AATCTTGTTAAAGACTGCCAATGATTATGGAATCAAGGTCGGCTTCCATA
TTGAGCCGTATAAGAATCGAAATCAAAACACAGTGAAGGATGATCTTATA
CATATTATTGATACCTATTCACATTATCCAGCGTTTTTCAGGTATGACTA
TAACGGTAAATCTCTTCCCATGATTTATATTTACGATTCTTACCACACTA
AACCTGACGAATGGAGTCAAGTTCTTTGGCCCAATGGGAAAAACTCTGTC
CGAGGTACCAAGTATGATGCTTTTGTCATCGGTTTATGTGTTAAGGAGAG
TGACTTGCGAGAATTGAGACGTGGAGGATTCGATGGTTTTTATACATATT
TCGCAGCAAACGGTTTCACCTATGGATCATCCAGAAGAAACTGGCAAAAT
TTGCATGATTTTGCGAAGCGATTTAACATGATTTTTATCCCCAGTGTTGG
TCCTGGGTACGTGGACACCAGAATCAGACCGTGGAACGGTGAAAACACAA
GGAACCGTTTGAAAGGTACTTATTACAAAGACTCGTGGAAAACTGCTTTG
AAGTTTCAGCCAAGAGTCATTTCGATCACTTCTTTCAACGAATGGCACGA
GGGAACACAAATTGAGAGAGCCATACCTCACATGACAGGTGATTACCACT
ATAAAGACTATGAACCACATTCTTCTGACTATTATCTGGAATTGACCAAA
AAATTCGCCAAGGAGTTCAAACAATGTGCAAATCCAGATTCGGGATTGAG
ATTTTAATTTGTCATTGTTTACTTCATCGGTATAGTTTGAAGTCTGATCT
TTGAAGAAAGCTCAAATAAGTCcttcaaagttttttgattttttttccta
cAGAAAGATCCGATACGGATATTGTATAAGATTCAAATTCTAAATTTCTC
ACCCTAATATAGAAATTTTTGGAAGCCCTACTTTTTTTCAAActccccgt
ttatttggaacctaaaatACTAGTATTGTATGTACGAAAACCTCACCAAT
TCTGCCCTGaatcttatttctcatttcataTATCTCATAATTAATTCTCG
TTCAGTTTTATAGAAAGTTTGTatatttaatgcattttatttATTCTATA
TACGCGTTGtgaagttttattttgtttttaactaaTTAATAGAgcatatt
ttttgaagaaagggTTAAAGTATAACAG
Run BLAST on NCBI

transcript from alignment at sc0000211:284920..297058-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015473 ID=TCONS_00015473|Name=TCONS_00015473|organism=Clytia hemisphaerica|type=transcript|length=12139bp|location=Sequence derived from alignment at sc0000211:284920..297058- (Clytia hemisphaerica)
CAGCGAGGAGCCAGCGATGATGTACAACATGCTTCAATGATTAAGAATGG
TAGGTATATCTTTTTATGGCTGGGGACTTCAATTCCATTGTATTGTATTC
AAGCCAGACAATTCAGTGGGGATGGAAGAAATATATTTACAAAGCACAAT
ATTTAGCACGCCGAGTCCATTATCTTTTCTCACATGCCCAATATTTTTCA
TATTGATTGGTAAGTAAGTAAGTAAGTAAGTATTTATTTACCATTTAACA
CTACAAAAAAAGATACAAGTGATGTAATGCACAAAAAAATATATGGAGGG
AGACCGCCTTATAGTCTAGCTAATCAAAAAGATGCGGCCACCTTGGATGA
GACTGTGTCCAAATAAATGGTTTATTATCCGTTCATTGCTAAAGTATTTC
TCGTTTTCAAACATAATTCCAATTTATAAGCTCATAAATCTGGTTTCTTG
GTAGTTTTTTATTCAAAAGTCTTTTTTATTTTGTGACGTAACGTCAAAAA
GAAGATGGTCAATTCCAACAATTGTCATGAACTCGTTGTATGACGTCAAT
TTTTGCCTCCATGGAAGCTAAATATTCTAAAATATTGGACAGCAAATGCC
GCTATTTATGCGCGTCGGATAATAATCTGCAATAATTTGCATTGAGGATT
TGCTTTATAAAAAGGGACTAATGTTTTTATGATTATTTTTTTCCATACTG
TATATCTGTTTTTTTTTCAGTGGGGACAAAGATTAGGGTGTAATAGTCCG
GAGGGGGTACTAGGGTTGCGAGCCCACAGGGGTGGCGCCCAACTTTTGAC
CCTTCGACCCTTACCGGGACTAAAAAGGAGAAAACAAAGGAAAATTTTGT
GGATTTTACAACCCTTATCGAGAAAAATTTGACCAATATCGATCTTTCCA
GGGGTAAAAAAAGTTGAAATTTTCCTATTTTTCCAACCCTTAGTGGGACA
TTCCATTTGCCTATGCCCCCCGGTATTAGAGGGTATAATTTTCCACTGGG
TACGATATTTTTGCCAATTTTTCCACTGGAAAGGAGTTCCAGTGGGTCGT
CTGTGCGATGGGGCGGGTGCTAGGATATTCTTTAAAATAGTAGGATGAAT
TTAATGCTATCATGGGGGGGTTTGTACGTTTACGGTGTGACGGGATTGGC
CCTTTTTTAGTACGGTATTATTACGGGATTTGACGAAAAAAGAGACGAGA
AAACGGTATTTTAAAATCAGGCAGTGACGGTATTCAGGTACACTTTTGCC
CTGTACAAGCCGGTGTGACGGTGTTATTATTTTTTCAATTTTCGGGATTA
CAGGATTCAGCAAAAATTTTGACGGGAAAACGGTATTTCGAATCCCTTCA
AACCCCCCCCCTATCATGACAGCGTAACTTAGATATTTTATACTCTACTG
TAATCAGTATATATAGACTTAAACTTGTATATCAAGATTACGAGATTTCG
AGTATGGGCCGATTTTACTTAGTTTTCAGTGGTTTCATTTTCAATTTCAA
GCCAATATCTTAGCAACCGAGAGCTCGTCCATAGTTACAGGGAATTGAGC
AAAAAAACAAACATAGGAAGTTTTCCAAATCCCCTACAGTATTTCAATTA
AAACCAATAAAAAATGAAACTTTTCCATGTTTCTCTTTTTTCCACCAATT
CTTCAAAATGAAAATGTTTAAGATTTAAAGTTCTTCTTTTATTCAATGAT
TTTTTACGGCACTTTGTTGACAATCTAACTCTCCCATCAAATTCCCGCTT
TCTTCAGTAAATTGAAGATGAGAAAAAACCTAAGCCTTAGAATCACAGAT
TGAAAAAAAATTATGAAGGGTGGGATTTTACAGCCGCCTGTCGTGCAAGG
CACTGAGAGGCCACAGGTGCCAAAAAGAAGGGCCATTTGAATGCAGCAAT
CTCATTGGTGGAAATTTTATAAACGGCTGCACTGCAAAGGAGCGCCAGGA
AGCAATCAGTAGAAGAGACCACTTTCGTTTTTGTTGCAGATTTCGATATA
AACTTCTCTCAGTCAGGGATTACTTGTCAATGTGTTGTGTCAACTTGTCA
ACATTGTATTGAAAGATAAAAGAGGTAAGACTAGCCTAGTTTCTAATCCT
GATATGGGAGTTTAAGTTTAGACTGCTAATTTGGTTAGCTACAAAGCGAA
ATCACATTCATTTTTGATTGAGGATGATTTTTTTGTGTCAATCTTTGGTA
AAATCATCATTAGTTGTCAAAATTTTGCCTAATAATCATATTAAAAAATA
TTCCATTTTTTGAAATATGGGAAAGACAAAATTTCCTTATTTTAATTCAT
ATGAAATAATGTGTCTGGTATGAAACGGGAGCACTTATGTAAAAATAAAT
CTCTTTAAATAGTGATTGGAAAATAGTTTTATTTTATTTTTGGCGTGTGG
AAAACAGTGCTTTTTAATGATTTTCGAAACTTTTAAACTTTATTTATTTT
TGCCTCACTACACCAGAAAAAATTCTCAGACCAGAAAAATTGTACTCAAG
AAAAATGTTACTCAAGAAAAATGTTGACATAATTTTTCTCAAAAATGTTT
ACAGATCACATGGGTTTTATTTTTGTTCTTGAAATTAGGTAACTTTGTCT
ACCGTTTTTCTCAACATTTCTCGCAACTCTTGAATAATTGAGGCAAATAC
AGTATCCCACTTTTTGAGTTTATAACACCTTCTTTTAGGGCCTGTAGAGC
CAGATTGAAACAATTTGATCAACATTTGATCTTTGTTAGTAGGTTAACAC
CTTTCGACAAAAATAAAATTCCTAAAATGCTCAAAAGCTGAGTAATAATG
GAGGCTTAAATTTGTCAAAAAATGAGTTTTGTGCCATATCTAACCCTCCA
TTATGGAAAGTGAGATCAAGGTCACATAGGTTTTTTTGGATTTTTTTACT
GTGAGTACTTTCAGAAAATCAAAAAACCCATATCGTCGCATGAGAAATAA
AGAGACTTGTCTCCAATTTTTCAAAAAATGAGACAATGATTGATCCATAT
TCTTCAGAAAATATTCTTGGAGATAAACGGACCTAAATCCATGAGGTTTG
ACTTTTTGGCCTTAAATTTGGATACTATCTCTATTTTTTTAAATGGATTG
CAGATTTGAACAAATTGTATAAAAGACAACCCTAAATCCAAAGTAAAAAA
ACTTAAATCCATTTTTTATATGTAAAGTAATAGGTAACAAAATTCACAAT
TTTGAGAAGTAAAAAGATTTGTCTCCATTTTCTGGCGATAACTCTTTTTA
TTTCTAAATTTTTAAATGCTAATATCTCAACACATGGAAAATGGAGACAA
GTCTCTTCATTTCTCATGTAACGATATGACCTTAGTTGCAACTTGAAATA
TTTTCTCTCAAAGCCAAGACTTTTACACTTGACAAAAATACTTCAACCAG
CCCTCAAGCTGCCGTTATGGATTTTTGGGATCGAAAATTTTAGTGTTTTT
TATTATTGTCTGCTAAATATCCAAAAGTAAATGCAAACTAAATTTCATAC
TACCAAAATTGTCCAAAACTGCCTGGTTCTTAGAGCTTAGGATGTTTTGA
AAAAGGTATGAATCTAACATTCCTTTTACGAATTAGGCTGGGCTTAAAAA
ATTGTTGGTTTGCTGTCACCCGACCCTAGATTTTAGAGGTGGGTCGGTCG
GTCGGAATTTTTTTTTATTTTGGCGATTTATGAAATTTTTGTCCGTGGAA
GGGTTAACAGTTTGTTTACATTTAGGTAATTTTGAATAAAAAACAGAAGT
GCTAGCAGGGAATTTACGATTCTTATGCTTGCAAGATACGAGTTTTGATT
TTTTATTGTTTGAAGTTTTTGAAGGAAAAAAATCTTTAAAATGGCAATAA
AATTTTTTGGGTCGGCAGGTTTCGAGGTAGGGTCGGTCAAGTGACGGCAA
ACCAACAATTTTTTAAGTCCAGCCTTATGCCTTGAAAATATCTAGATCAG
TTTGTTACAAATACAAGCTATGTGAAAACTCTATTTTCATTTCTATTTGG
TTGACTTGCAGGAGGCTTTGAGGGCTATTTTCGCAATCATAGACGCTTTC
AATGAACGCCCCATTAGCACCTTGGACTGACTACCCAATTCCCCTCACAT
GGCATGGGTTGACCCGGGCGAAGGTTTAAAGACATAAAGCTACTTACTGT
AAATGGCTAAAATTAATCGCAAAAAACCTTATAGAGAGGAATTGTAACTT
ATGATAAGCTAGGTAAGAAAAATATGAAATAAAAGACAAGGGCTTCCAGA
AACTTTCTTTTTTTCGTTAATTAGAGCCTTTAGATACATCTGCATTGAAA
TTGGTGGGTTGAGTTTCCCTTTAAATGTTTTGTAGGCTCAGAATTGTGAT
TGACATTTTCATGTTCAGCCCATTTTATGGCAATACTTCTCTTTGTTTCA
CTGTTATAATTTTGTTCGCATGAATATACTCCCACATAAATTTGGCATGT
AACGTGGGGATTCTTTCGAAATTTAACTTTCTCAGGTCTCCAAACAATAA
AACAAACTAGCCGGTACCCGGCGTCGCACGCCGGTTAAGCTGTAGCTGAA
CGCACTAAAAGTCCTTTGGATGTTGAAGCTGGCTTAAAAAAAGCGATCAA
ATAAAAAAAAGAAATCTGTACAACGTTTAACTCTAACCTTCCCCGGGTGT
CTTATCTTTTAACCATATTTGGATCGTTTACTGCCCTCCCGAGACATAAA
GCCCTAGCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCAGG
TAGTTATTTTTCTCGCTTCGCTCGCGTTAAATATGCCGTCCAGTTTAAAT
GACAATTTTTCAGGAAAAAGTGGGAAGGTCACAAAGAATAGTGCAACCAT
TTGTTTTTTATCAGATCAAAGAAAAAATAAGACAATTTAAAGTTGCTTTT
TTAAAGGGGGGGTTTCACGTTTGACGGAGGAGCGGAATCGGCCCTTTTTT
CGGACAGAGTGGCGGAATTTGGCGAAAATTTAGACGGAATTACGGAAATT
GGGTTCTCTGACGGAGACGGAAAATCAGACAATTTTAGTGCGGAAAAACG
GAATTTAGCAAAAAAAATTGCGGAATTTCGAAATTGTTAAAAGATATTCC
AAATTTGTGGAATTTTCAACAAAAATATTGAATTTCAAAGGAATTTTCGG
TGACGGAATTTTGGTTCAATTTAAGACGGTTTGACGGAAATTGGAGAAAA
AATTGGCGGAATTGCGGAATCAGGTACCCCCTGAAACCCCCCCCCCTTTT
AAACCCTTGGCATAATTTTTCGAATTTGAACATATAGTAGAGGGAATTTT
GTAAAATCGCTTGACTGTTTTGTTAGAAGCACTTGTTATACATTTTTGGA
AAGCTAAGGGGTAGGGGAATCGAAATTACTATGTTTCCAATTTTTTTTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCGATTCCCCTACCCCTTAGCTTTCCAAAAATGT
ATAACAAGTGCTTCTAACAAAACAGTCAAGCGATTCCAAAAAATCGAACA
AAATTCCCCCTACTAATAAAAAATGACAGACTAAACGAAGACTTGAATAT
TTTTATAAGAAGAAAGAGGTAAACTAATTTTTTCTTATGCTTGATATCGC
CCTTTGAATGCTGGTTGTTGTCCACAAACTTTTTGATTTTAATGTTTTGA
TTTACTTTTGAAATGTTCTTTTCTATGAAATGAAATTGTTTTGTTTTGAA
AAGAATTCGAATGTCATTTATACGATCGTTAAATACATTCGAAAACATTT
AAAACAAAAGAAGAGAGAAAAAGACAACTCTGGGCAGAAATTAAAATTAC
TAAAAATGTAGATGGGCCTTAAATTTCAAAACAAAGGCTGAATAAAGTCT
AAACAAAGCTCTATCCGATCTTTTACAAATGGCGCGAATCCAATGGAACA
AATTTGTGGAGCAAGAGACTAAAAGTCATAATTTTAAAACACAAACAAAG
CGAAAACGAAAGTGGTGACACACAGACACACAAAGCACCGCTATTAATAT
ATAGATAAAAATTTAATAATAATTATTATTGAGTTGATGGAATCTTTGAG
GAACTTTTTTGGGGCATTTTTGTTGTTTTCACAGAATGGAATCCAATTTT
GATTGTCTTTCAGGTCAATATCAGATTTTGGATTTCTTGGGTTGTTTTTC
TTGTCAGAAAATTGTGTAAAAATAAACAGTCGAAAAGTCGAACAGTCGAA
ATATTTTTTTTAAACGTGCACCTGTGTTTTTTGCTAGTGTTCATAGAAAA
ATCCAAGTATTTTGGAATGTTGACATGAATATTTCTTTATTTTTTATTTT
TTTAACTTTATTCTTTACTCTACCTTTTGCTTTTCAGAAAAAAAATTATA
AAAAACCATGGAAGGCATTGGAGCCAAAGGATTGAGAACAAAGTTAATTG
TAAATTATTTACCACAGTCTATGACTGATCTTGAATTCAAGAGCTTGTTT
GCAACTATTGGTCCTGTAGAGAGTTATAAAATATTAAGAGATACAGCCAC
TAATTACAGTTTTGGGTATGGCTTCATTGATTTTCAAAAGCCAGAGAGTG
CTGACAGGGCCATTGCTGATTTAAACGGACATAAAATTGCCAACAAAACT
CTACGAGTAGCTTTTTCAAAACCTCAAGGAGCCAGTAAAAATATCAATCT
TTTTGTTCAAGGTCTTGGCCATCGAACAGATGAAGAAATACTTCAAAATT
TGTTCAGTCCTTATGGAGAAATTGTTAATGTTAAAGTTGTTAGGGATGCT
GGTAATAATTCAAGAGGGTTTGGTTTTGTTTTATTCAAAGATAAGTCTCA
AGCAGACGCAGCTATCAGAGCATTGCAAGGTCACTGTGATGGGTATGGTA
TGGACCTGCAGGTAACTTTATATCATTTGAGGCATTGTTTAGATTGTACT
TTGTTTTTCTTTATCTTTTATTAAAATTGACCATATATATGTAAGTATAC
ATGCAAAAATGATTATGCTAATTTTCCCAATAGGGAATTTTAAAAGTGTT
TAAAAAATTAATATTTTTTAGATATTTATCGATTTCGTCCTGCTACTATC
TCCTTTTCCTGTTGGCCAACAGCTGTTTTTTCATCAACAGTAAATTTATT
TTAAAAAGACATAAAATCAGAAACTTTACTCACTTTTATTCCACATGTTA
AGTAGATCATACAACCAACAAACATAGTTAAAAAGAGTGCTAAAATAAGA
TACATACCACTTTATATTAATTACTATTTTGAACACCTTTTATTTTTGTG
CATGTTTTCTGTGCAGAAAATTATTGAGGGATTAAGGTAAAAGTATTTGT
TGTTAAAAGTTCTTTGTTTCCTTTATAGATAAAATATGCCAAAGAATCTT
CAGAGCAACAGAGAACCCATCAAAGGTACAAAGAGTTTGTAAGATCAAGT
TACCAACCAGTCCAACCTGTCACAGTGAATTATAATGGGGATTATGCAAC
AGTTGTCCCTGTCGGTAATGCTCATCAAATCAGTTATCCAACAAACTCTT
ATGGTGGAGGGTATTCACCAGTTGAATACCAAAAACCTCCAAGAGGTAGA
GGTATGGTTGCCACAAGGTTCAATCCTATTGCGAGGCCTGTTTCAAATCC
TGGTCATAATGCAGGAATGTCAATGGGAATGGGAGGAGGCCTTAATGAAG
GTGCTCCGAATGTTGTTTTCGCATACAACATAGGTCCAAATGCCACTGAG
GGAGACATGTATGCACTTTTCTCAAAATATGGTCGGATCAATAAGGTCGA
TGTTGTCGCAGGGAAAGGTTATGGTTTTGTGCACATGCCTGTTTTTCATG
AAGCAAACGAAGCAGTGAGGGCGTTGAATGGTGCATTTTATAACGGAAAA
AGTCTCCAAGTGTCAATTAAAAGGCGTTGATCATTAGGATTTTAGTGGCT
TCTACAGAGTGTGGCTCATCTCAAGTGCATAAAAATGCTTTCCTTTTTTG
AGTCATTTGTTGTACTTTGGTAAGTACTGAGAAAAAACCTTCTGATATTT
TTATCATTCATTATTTTTAACGTTATGATCTGTAAATATTTTTTTGTTCA
TATTTTGATCCTTCACCAATGACTTTTTTTTTTAATCAACAGGATTTTTC
TGATTTTAGGGCTATTTTGACCATTGATCACTACTCTGTATGATTTTTTT
GCTAGTTTTTTTCTATTTTTTTCTTCGATTTTATTGTTTTTTCTTGTAGT
TTTTTTGCTTTGATTTCTTGATGGAAGAATTTTGAAATTTTGTCGTTTTA
TTTTATTTTTTCTTTCCATTTTGATTTTGTTTGTGTTACATTTTGAAACT
TCGTTTACTATGGCTTTTAAAATGTTATTTCAATTCTTTTATTGAAAATT
GAAATTCCTTGTCATTTTTTTACTACAATGCATTCCGTTCTCTCTTTTCA
GGCTTAATTAAGATTATTTAAAATGGCTAGAACTATACATTTTGTGTCAT
GGCTTACCGGACGTTTATTGAAGAGCTTCAAATTGGTGATTGTTGCATCC
GTCATTTTAATGTCGTTAATTCTTCTTATGATGAAGGACGCTGATCCTCC
CCCTGGTGAAATCAAAGCTACAAAACTCTCCAAGTTGTCATTTGGTGAGG
GAACACAAAAGATGCTAAAAAAACTTCATCCTTTGAAAACAAGAGGTGTT
AAAACATCTGAAAGTGTACGGCAGGATGAAAGGCCTCCTTTACCAAAACA
TCCTTTGAAAATTGAAAATGTTCAAATTGAAACTGAGAAAAAAGTTCAGC
CAACACAGGTTCTCAAGGAACCTATAGCTGACAAACAAATGGATCTGAAG
GAACCTAAGGAGAAGCCTTGTTATCACATACATACTTTCTACTACCCATG
GTATGGTAACCCCAAGTTTGATAAAGAATACATACATTGGAACCACCAGC
TGTTACCACACTGGAACCCACAGGTGGCAAAGCATTATCCAAAAGGTGTA
CACCAGCCACCCGATGATATCGGTAGTGATTTCTTCCCTAAGTTAGGAGC
GTACAGTTCACGTGATCCGCATGTTATTCTTAGCCATATGCAACAACTAT
CTTCTGCAAACATTGGTGTTGTCATTGTGTCTTATTATCCACCCACTCAA
GGTGATGACAATGGAAAAGACTGGCAAAATGTTTTCCCAATCTTGTTAAA
GACTGCCAATGATTATGGAATCAAGGTTGGCTTCCATATTGAGCCGTATA
AGAATCGAAATCAAAACACAGTGAAGGATGATCTTATACATATTATTGAT
ACCTATTCACATTATCCAGCGTTTTTCAGGTATGACTATAACGGTAAATC
TCTTCCCATGATTTATATTTACGATTCTTACCACACTAAACCTGACGAAT
GGAGTCAAGTTCTTTGGCCCAATGGGAAAAACTCTGTCCGAGGTACCAAG
TATGATGCTTTTGTCATCGGTTTATGTGTTAAGGAGAGTGACTTGCGAGA
ATTGAGACGTGGAGGATTCGATGGTTTTTATACATATTTCGCAGCAAACG
GTTTCACCTATGGATCATCCAGAAGAAACTGGCAAAATTTGCATGATTTT
GCGAAGCGATTTAACATGATTTTTATCCCCAGTGTTGGTCCTGGGTACGT
GGACACCAGAATCAGACCGTGGAACGGTGAAAACACAAGGAACCGTTTGA
AAGGTACTTATTACAAAGACTCGTGGAAAACTGCTTTGAAGTTTCAGCCA
AGAGTCATTTCGATCACTTCTTTCAACGAATGGCACGAGGGAACACAAAT
TGAGAGGGCCATACCTCACANCCCCCTGGTGAAATCAAAGCTACAAAACT
CTCCAAGTTGTCATTTGGTGAGGGAACACAAAAGATGCTAAAAAAACTTC
ATCCTTTGAAAACAAGAGGTGTTAAAACATCTGAAAGTGTACGGCAGGAT
GAAAGGCCTCCTTTACCAAAACATCCTTTGAAAATTGAAAATGTTCAAAT
TGAAACTGAGAAAAAAGTTCAGCCAACACAGGTTCTCAAGGAACCTATAG
CTGACAAACAAATGGATCTGAAGGAACCTAAGGAGAAGCCTTGTTATCAC
ATACATACTTTCTACTACCCATGGTATGGTAACCCCAAGTTTGATAAAGA
ATACATACATTGGAACCACCAGCTGTTACCACACTGGAACCCACAGGTGG
CAAAGCATTATCCAAAAGGTGTACACCAGCCACCCGATGATATCGGTAGT
GATTTCTTCCCTAAGTTAGGAGCGTACAGTTCACGTGATCCGCATGTTAT
TCTTAGCCATATGCAACAACTATCTTCTGCAAACATTGGTGTTGTCATTG
TGTCTTATTATCCACCCACTCAAGGTGATGACAATGGAAAAGACTGGCAA
AATGTTTTCCCAATCTTGTTAAAGACTGCCAATGATTATGGAATCAAGGT
CGGCTTCCATATTGAGCCGTATAAGAATCGAAATCAAAACACAGTGAAGG
ATGATCTTATACATATTATTGATACCTATTCACATTATCCAGCGTTTTTC
AGGTATGACTATAACGGTAAATCTCTTCCCATGATTTATATTTACGATTC
TTACCACACTAAACCTGACGAATGGAGTCAAGTTCTTTGGCCCAATGGGA
AAAACTCTGTCCGAGGTACCAAGTATGATGCTTTTGTCATCGGTTTATGT
GTTAAGGAGAGTGACTTGCGAGAATTGAGACGTGGAGGATTCGATGGTTT
TTATACATATTTCGCAGCAAACGGTTTCACCTATGGATCATCCAGAAGAA
ACTGGCAAAATTTGCATGATTTTGCGAAGCGATTTAACATGATTTTTATC
CCCAGTGTTGGTCCTGGGTACGTGGACACCAGAATCAGACCGTGGAACGG
TGAAAACACAAGGAACCGTTTGAAAGGTACTTATTACAAAGACTCGTGGA
AAACTGCTTTGAAGTTTCAGCCAAGAGTCATTTCGATCACTTCTTTCAAC
GAATGGCACGAGGGAACACAAATTGAGAGAGCCATACCTCACATGACAGG
TGATTACCACTATAAAGACTATGAACCACATTCTTCTGACTATTATCTGG
AATTGACCAAAAAATTCGCCAAGGAGTTCAAACAATGTGCAAATCCAGAT
TCGGGATTGAGATTTTAATTTGTCATTGTTTACTTCATCGGTATAGTTTG
AAGTCTGATCTTTGAAGAAAGCTCAAATAAGTCCTTCAAAGTTTTTTGAT
TTTTTTTCCTACAGAAAGATCCGATACGGATATTGTATAAGATTCAAATT
CTAAATTTCTCACCCTAATATAGAAATTTTTGGAAGCCCTACTTTTTTTC
AAACTCCCCGTTTATTTGGAACCTAAAATACTAGTATTGTATGTACGAAA
ACCTCACCAATTCTGCCCTGAATCTTATTTCTCATTTCATATATCTCATA
ATTAATTCTCGTTCAGTTTTATAGAAAGTTTGTATATTTAATGCATTTTA
TTTATTCTATATACGCGTTGTGAAGTTTTATTTTGTTTTTAACTAATTAA
TAGAGCATATTTTTTGAAGAAAGGGTTAAAGTATAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008635XLOC_008635Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015473-exon-sc0000211-1575043694:297010..297058TCONS_00015473-exon-sc0000211-1575043694:297010..297058Clytia hemisphaericaexon
TCONS_00015473-exon-sc0000211-1575043694:289598..289797TCONS_00015473-exon-sc0000211-1575043694:289598..289797Clytia hemisphaericaexon
TCONS_00015473-exon-sc0000211-1575043694:288490..289130TCONS_00015473-exon-sc0000211-1575043694:288490..289130Clytia hemisphaericaexon
TCONS_00015473-exon-sc0000211-1575043694:284920..288057TCONS_00015473-exon-sc0000211-1575043694:284920..288057Clytia hemisphaericaexon
TCONS_00015473-exon-sc0000211-1510915933:297010..297058TCONS_00015473-exon-sc0000211-1510915933:297010..297058Clytia hemisphaericaexon
TCONS_00015473-exon-sc0000211-1510915933:289598..289797TCONS_00015473-exon-sc0000211-1510915933:289598..289797Clytia hemisphaericaexon
TCONS_00015473-exon-sc0000211-1510915933:288490..289130TCONS_00015473-exon-sc0000211-1510915933:288490..289130Clytia hemisphaericaexon
TCONS_00015473-exon-sc0000211-1510915933:284920..288057TCONS_00015473-exon-sc0000211-1510915933:284920..288057Clytia hemisphaericaexon
TCONS_00015473-exon-sc0000211-1491911889:297010..297058TCONS_00015473-exon-sc0000211-1491911889:297010..297058Clytia hemisphaericaexon
TCONS_00015473-exon-sc0000211-1491911889:289598..289797TCONS_00015473-exon-sc0000211-1491911889:289598..289797Clytia hemisphaericaexon
TCONS_00015473-exon-sc0000211-1491911889:288490..289130TCONS_00015473-exon-sc0000211-1491911889:288490..289130Clytia hemisphaericaexon
TCONS_00015473-exon-sc0000211-1491911889:284920..288057TCONS_00015473-exon-sc0000211-1491911889:284920..288057Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000211supercontigsc0000211:284920..297058 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.51524	1.24621	0.507339	0.313381	1.83529	1.01539	1.12273	1.04042	0.61115	0.814903	0.739125	0.702406	0.594335	0.851313	0.904403	0.770948	1.31182	1.20812	0.546866	0.576382	0.834519	1.08209	1.67233	1.19815	2.81135	1.7123	0.586921	0	0.938737	0.722809
Blast
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BLAST of TCONS_00015473 vs. Swiss-Prot (Human)
Match: MANEA (Glycoprotein endo-alpha-1,2-mannosidase OS=Homo sapiens GN=MANEA PE=1 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 9.997e-133
Identity = 196/387 (50.65%), Postives = 274/387 (70.80%), Query Frame = 2 
Query: 2420 KIENVQIETE-KKVQPTQVLKEPIADKQMDLKEPKEKPCYHIHTFYYPWYGNPKFDKEYIHWNHQLLPHWNPQVAKHYPKGVHQPPDDIGSDFFPKLGAYSSRDPHVILSHMQQLSSANIGVVIVSYYPPTQGDDNGKDWQNVFPILLKTANDYGIKVGFHIEPYKNRNQNTVKDDLIHIIDTYSHYPAFFRYDY-NGKSLPMIYIYDSYHTKPDEWSQVLWPNGKNSVRGTKYDAFVIGLCVKESDLRELRRGGFDGFYTYFAANGFTYGSSRRNWQNLHDFAKRFNMIFIPSVGPGYVDTRIRPWNGENTRNRLKGTYYKDSWKTALKFQPRVISITSFNEWHEGTQIERAIPHMTGDYHYKDYEPHSSDYYLELTKKFAKEFKQ 3574
            K + +  ET  K ++  ++  +P    +++L E      Y +H FYY WYGNP+FD +YIHWNH +L HW+P++AK+YP+G H PPDDIGS F+P+LG+YSSRDP VI +HM+Q+ SA+IGV+ +S+YPP   D+NG+   N+ P +L  A+ Y +KV FHIEPY NR+   +  ++ +IID Y ++PAF+RY    G +LPM Y+YDSY TKP++W+ +L  +G  S+R + YD   I L V+E    ++ + GFDG YTYFA NGFTYGSS +NW +L  F  ++N+IFIPSVGPGY+DT IRPWN +NTRNR+ G YY+     AL+ +P +ISITSFNEWHEGTQIE+A+P  T +  Y DY PH    YLELT+K+++++ +
Sbjct:   63 KSDRINSETNTKNLKSVEITMKPSKASELNLDELPPLNNY-LHVFYYSWYGNPQFDGKYIHWNHPVLEHWDPRIAKNYPQGRHNPPDDIGSSFYPELGSYSSRDPSVIETHMRQMRSASIGVLALSWYPPDVNDENGEPTDNLVPTILDKAHKYNLKVTFHIEPYSNRDDQNMYKNVKYIIDKYGNHPAFYRYKTKTGNALPMFYVYDSYITKPEKWANLLTTSGSRSIRNSPYDGLFIALLVEEKHKYDILQSGFDGIYTYFATNGFTYGSSHQNWASLKLFCDKYNLIFIPSVGPGYIDTSIRPWNTQNTRNRINGKYYEIGLSAALQTRPSLISITSFNEWHEGTQIEKAVPKRTSNTVYLDYRPHKPGLYLELTRKWSEKYSK 448

HSP 2 Score: 396.356 bits (1017), Expect = 4.226e-124
Identity = 184/355 (51.83%), Postives = 254/355 (71.55%), Query Frame = 3 
Query: 1197 KIENVQIETE-KKVQPTQVLKEPIADKQMDLKEPKEKPCYHIHTFYYPWYGNPKFDKEYIHWNHQLLPHWNPQVAKHYPKGVHQPPDDIGSDFFPKLGAYSSRDPHVILSHMQQLSSANIGVVIVSYYPPTQGDDNGKDWQNVFPILLKTANDYGIKVGFHIEPYKNRNQNTVKDDLIHIIDTYSHYPAFFRYDY-NGKSLPMIYIYDSYHTKPDEWSQVLWPNGKNSVRGTKYDAFVIGLCVKESDLRELRRGGFDGFYTYFAANGFTYGSSRRNWQNLHDFAKRFNMIFIPSVGPGYVDTRIRPWNGENTRNRLKGTYYKDSWKTALKFQPRVISITSFNEWHEGTQIERAIP 2255
            K + +  ET  K ++  ++  +P    +++L E      Y +H FYY WYGNP+FD +YIHWNH +L HW+P++AK+YP+G H PPDDIGS F+P+LG+YSSRDP VI +HM+Q+ SA+IGV+ +S+YPP   D+NG+   N+ P +L  A+ Y +KV FHIEPY NR+   +  ++ +IID Y ++PAF+RY    G +LPM Y+YDSY TKP++W+ +L  +G  S+R + YD   I L V+E    ++ + GFDG YTYFA NGFTYGSS +NW +L  F  ++N+IFIPSVGPGY+DT IRPWN +NTRNR+ G YY+     AL+ +P +ISITSFNEWHEGTQIE+A+P
Sbjct:   63 KSDRINSETNTKNLKSVEITMKPSKASELNLDELPPLNNY-LHVFYYSWYGNPQFDGKYIHWNHPVLEHWDPRIAKNYPQGRHNPPDDIGSSFYPELGSYSSRDPSVIETHMRQMRSASIGVLALSWYPPDVNDENGEPTDNLVPTILDKAHKYNLKVTFHIEPYSNRDDQNMYKNVKYIIDKYGNHPAFYRYKTKTGNALPMFYVYDSYITKPEKWANLLTTSGSRSIRNSPYDGLFIALLVEEKHKYDILQSGFDGIYTYFATNGFTYGSSHQNWASLKLFCDKYNLIFIPSVGPGYIDTSIRPWNTQNTRNRINGKYYEIGLSAALQTRPSLISITSFNEWHEGTQIEKAVP 416
The following BLAST results are available for this feature:
BLAST of TCONS_00015473 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MANEA9.997e-13350.65Glycoprotein endo-alpha-1,2-mannosidase OS=Homo sa... [more]
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