TCONS_00015457 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015457
Unique NameTCONS_00015457
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3433

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015457 ID=TCONS_00015457|Name=TCONS_00015457|organism=Clytia hemisphaerica|type=transcript|length=3433bp
GTAAGACAATGAAATAATGATAATTAGATGGCTTCTCTTGTTTGCTCTTC
TTTGAGTGAGAATGGAGGAGATTTTTCTCGTTCGTGTGTAAGCATCGTGC
ATTGGCTCATGTTTCCCTCGTCTTGTTCACAAGTATTTTTGTAAGACGTC
ATTGGGAAAACCATCAACTAAAAGCTATGTGTATTTTAAGTGTACTTTAG
GCATTATATTAAATTTGTGTAAGGAGTTATATTAATACTCGGCATGGGAT
GAAGCTATACGCATCACATCAAGAGtaggcaaaatatttttttatattta
cagaGTTTCAAATGTTCTAATATCAGCTTGATGGAGCaaacaaagaagaa
gaaatcaaGAGATGCAGCCAGGCAGAGGAGAGGGCAGCAAAATGACGAGT
TTAGTGAGTTGGCTGCCCAACTACCCTTAACTTTACCACCAAGTGAGAAG
CTAGACCGTCTGTGTGCGATGAGACTATCTAACAGCTTTATCAAAATCAA
ACATGTTCTACAGCAAATCAAAGACACCAACTTGATGGACAAGGAGTTTA
CGGATAACTTGTTCAACGCTCACATCCAGAATGCTTTAGGAGGATTCATC
TTCGTATTATCAGAGGACGGACAAGTTTTGTACATTTCTCCAAATGTCTC
TGAGAACCTTGGTCTGCAGCAGTTGGATATTACTGGCAACAGTGCTTACA
AGTATGTCCATCCATGTGATCAAGAGAATCTGGCAAAACAACTTGGTGGA
CAAGTCCCCTTGGAAGATATGGAGATTTTTGATGGTCTTTATTGTTCTGA
TACTTCCAGTTATGTTAAGAATCCAAAACAAGCGTCGTGCGCAGAATTGG
AGAGCACACCACATCGATCATTTTCGTTGAGAATGAAATCAACACTGACA
AGTCGTGGTAAAAGTGTCAACATCAATGCTTCAATCTATCGGGTTGTACA
CTGCGTTGGAACTATTCAGACGTACCGAACAAAGCTGGGAACATCCAACG
GTGCCATGACCCGCTGTCTATTGGCCATCGGAAGTCCCTTGTTATCCAGC
GAGAGCTTCGAAGTACCGGCTGATGGACAAACTTTCGTCACCAAACATTC
TTTGGATTTAAAAGTGACAGAAGCTGAAGACTTGGCTTCTGACTTATTGG
GTTACAAATGTCGGGCGATGGTGAACACTTCGTGGTATCTGTATTCACAC
ATGTGCGATACCAAAGTCATCAAAGAGTGCCATGAGAGCGCTTTGAAGAA
GGGCCAAGCGGTGAGTGGATATTATCGCGTCTTGTTGAAAGATGGTGGAT
GGATCTGGATGCAAACCAAAGCCAATGTGGTCTACCAATCATCCACTGGA
CAACCACAGTTCATTAGTTGTGTACATTATGTCATCAGTGGTATGGAGCT
TGGTGAAGAAATCCTTTCGATTGAACAACTTTCCACTTTCAAACTGAATC
AAAAGAAACGACAGCAATCAACCAAGAGAGAGGCTCCAACAACAACCTTC
AAGAAGTTCTCCAAATCTGTCATCCACAAGAAAGAAGTCGCTCCAGTCCC
TTTCAAAGCCATTCCATGCGAACAAATACCGGAAGCCATCTTTTCCGAAA
CCGATCTTCCTGAAGATCCAGATATGCCCGGATTGGAATTCTTGGATGTC
GAAGAACAACTGCAATCATTCCAACCGGAATTGGACAGCAGATCGCCGTT
CATTCCCGGACCTTTCTCTGATTATGATTTGAAATCACGTGACATCAACA
CGCTGTTGGCGGATATTGATGAAAATGAGCTGATTGATCGTGCTCCGTAT
ATTCCACCACCCTGCATTGACAAGATCGTGTCTTTTGATGACCTATCCTT
GCCAGATCTGACAGATAATTATCAAGATGCTCTCCAAGATTCTCCACCAC
TTCAAGAAGAGATGGCCGGAAACACTGCTGCTTTGATGGACCCTGTTGAT
TTCAACGGACAGATGTTCGACTACGGAAATGCCAAAGTTCCGGCCCACTT
GTTGAAAAAGTTTATGCCTATGATGAGTGGTGGTGCGAAGAATGATTTCG
CGTGAAGTTTTAAATGCAACACAGAAACAACATTATTTTAAATGGGAACG
TATTTTAAGTGTGATTGACAAAAGGACCATGAACCCCATTGATTGAGATG
AtgcaaaaacattttcattttcgtttattgaAGTAGCAGGTGCTCTCAAT
TGTTTTTTAATCCATATTTAGTTCggcatttttattttatttttttgatt
ttagtttAAGGCGTTCTACTTAAAATTCAGAATTTGGAATAggcaatatt
tgaaaaatgtaataTATTTTGTCATGCAGTATGAATCTGTCAAATCAGAG
ATCCACACACTTTGGGACGCCCATCCAGATAATCCCACTACACCTTTTTT
ACAACTTTGCATTTCATTTATTGGACCCATACACACCATCCACCCGACAT
TTTTTTACCTGAACGCTTTTGTAGTATAtttcattcttttatttttaaga
tataTAGTCTATAACACGATAAAACAATTTCAGGGTGTTTACGGGGTATT
TATCTCTTGAAAATAAACCCTTCAGAATCTTGAAAATTGCTAATTTTCGG
GGAGAAACCTTGGAACTCCCCTGAAAACATTTAATACCTTGGAGATTTCC
TTTTAAAACTTCAATACCTTCTGTTAGAAGTTCtctgaaaaccttgaaaa
gcacgAGCTTTGTACCATGTACTTGTCTTGTTTTGGCTTAAGTCATTACA
GCGTTTATCTACAAAGGTTTTCTTGCTCGCTTTGCCCGGAACCAACTGTT
TTGCAATAAGAAATATCTACCATTTTCATAATTCTTAATATTGAGAGACC
TTCAACAAAAAGATTGGtcaaacggctaaaaaacactTGAAAACCCATCT
CGTCAAAAATGTCTGAAAGTGGGGAAAAATTCCGTAGATACCCCGAAATC
GCAGTCGATTTAAGCGCTTATCAAAAACCTCATAGACGAAATTGGCTTGA
GGAGTGTATATGCTTAGTAGCTGGAAGTTTGAGACAAGGGCTctatagaa
aatgaaatttcGCCAAAATACAATGTTTTGCGATCGTGCATAtcttttca
ttcagtatattaaACTATATCGTCGTCCACATGACttaaggttcaatctc
aaaataagtgtcttggaaaattggGAAGCTTTCAATTCTGTGCTGCCTtt
ggcctttttgtcatataaaaacattgattattcctctacatgaaaaaagg
gcaatctcaatctcaaagatgaccacaagagtaaaactttaaattttgta
aggtactaattttgagatgtaacctttagtcatgtgaacGACGATATCCG
CCTTAGTAATGTCTTTATAACAAtgtaatgagattttttttctttagttg
GTGCAAGAattttattctttaaaaatcttcaaG
Run BLAST on NCBI

transcript from alignment at sc0000211:73847..81508-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015457 ID=TCONS_00015457|Name=TCONS_00015457|organism=Clytia hemisphaerica|type=transcript|length=7662bp|location=Sequence derived from alignment at sc0000211:73847..81508- (Clytia hemisphaerica)
GTAAGACAATGAAATAATGATAATTAGATGGCTTCTCTTGTTTGCTCTTC
TTTGAGTGAGAATGGAGGAGATTTTTCTCGTTCGTGTGTAAGCATCGTGC
ATTGGCTCATGTTTCCCTCGTCTTGTTCACAAGTATTTTTGTAAGACGTC
ATTGGGAAAACCATCAACTAAAAGCTATGTGTATTTTAAGTGTACTTTAG
GCATTATATTAAATTTGTGTAAGGAGTTATATTAATACTCGGCATGGGAT
GAAGCTATACGCATCACATCAAGAGTAGGCAAAATATTTTTTTATATTTA
CAGAGTTTCAAATGTTCTAATATCAGCTTGATGGAGCAAACAAAGAAGAA
GAAATCAAGAGATGCAGCCAGGCAGAGGAGAGGGCAGCAAAATGACGAGT
TTAGTGAGTTGGCTGCCCAACTACCCTTAACTTTACCACCAAGTGAGAAG
CTAGACCGTCTGTGTGCGATGAGACTATCTAACAGCTTTATCAAAATCAA
ACATGTTCTACAGCAAATCAAAGGTACACTTTCTTTCATCATGTTTGTGT
TGACCTCTGTTTAAAGGTGTAACAAGGGTGGTTTTTGCAATTGAGAAATC
TGGAAGTCTTAAAGCTAGAAAGATATTTCGATTATATATCAATAACTGAC
TCCGAAATGATTTCTTTTCCTTTTTCAAACCTTTTATTTATAGAGAATAA
AAAATAAACTGTTAATATATTTTTTTTAAACCAAATTATGCAATTCTCGA
AGCCTTCATTAAATGACGGTCGTTTATTCACCATAATGTTGTCATAATAT
CAAAAGAAAATTCGCTAAACCGTGAATAAATTACGATATGTAATTCTGCT
GTCTTAACCTCGCATTTTACTTTCCCATTGGAATCAATCGTCTGACTACA
CGCTTTTATATAAGAATAGTGTTTTTCCATTTTATCATGAATATTCTTAC
CTTTTTGAGAAAAATCATTCTCAAATATTCTTATGGTATTCTTAGGCTAG
GATCCAAACCCAGCCTAAATCTAGCATGCGACATGTAACTAATTTCATAA
TCTTCTACGGCGATTTTTCCAAAAGATCCTCCTCAATATTCCTTCACCCA
ATCCGCATGATTTGTTCGCGCTATTTTTATTCCTCATTCTTTTCTCACAG
ACACCAACTTGATGGACAAGGAGTTTACGGATAACTTGTTCAACGCTCAC
ATCCAGAATGCTTTAGGAGGATTCATCTTCGTATTATCAGAGGACGGACA
AGTTTTGTACATTTCTCCAAATGTCTCTGAGAACCTTGGTCTGCAGCAGG
TAAGGGTACAAATCCCCTGGATTTTAATGTTTTGTTTTGACTACCTCCAA
TAATTTGTTAAAATGTTTATCTGAGGGGAAACTTTGTTGATTGATGATAT
TTTTTTAGACACATACACATTCGTTCCTCTCTCTCTTGTTATCTTTTTGT
AAGAGGTCTGTCTTTCCGATCTATTTTCACCCCACACACGTTTTTTATAA
GAACAAACTATATAAGAACATAAGGCTTCGATGGCTAAAATATTAAAACA
AGTTAAGAACATTTTTATACTTAAAAACTCAAAAACTTAAGAACATCTGA
CTCTGAATCTTTGTTATGCTTTTGGAATTTTTCGCTTTTCCTGACAACAA
TTATCTAATCATTATCCAATTCTTCATGATGCATTTTTTGTCAAAGTGAT
TACCGCTCGAGATGTGCATAACATATCTCAGATATCCCTGAGCTTCGACA
CGTTTCTCTTTTGCTCTAATTAAAATAGAGTTTATATAGATATTTGTTCG
AGTTAAGGAAACTTCGAGTTATAGAGAATGTGCTGTTTTAATACATGATA
AACGTTGAGTTAAATTAAACCCCTTTAAATTATTTCAACCGAAAATCATG
ATTACAAGTTTGAGTAAAAAAAAACAATGCTTTGGACAATTTCGACATCA
AAGCATTACACTTCACCCTTTTTATAAGAGCATAAAAAATTTGCCTTCGG
ATTTTCTTAACTTTTTGTTGAGTTTTAAAAATGCTCTTTCCAACGAAATT
GGGTGTCCGCAAAGTATTCGCAATGCCTTAAAATGTTCTAAACCATGTTC
TTAAATAGTTTGTTCTTGTAAAAAACGTGTACTTGATCTAGGAATACAAA
TAAGAGAGAAATGGTTTCAATCTTCCGATGACCTAGATCATTAAAAGTCG
AAGTGCTCCCTTATGAAATTTTTCTGATGTCTCGTTGCAAATGTACTAAT
TCGAGATAAATGCAAAAGACAATCCTTGCATGAATTGTAAAACCTCCTTG
ATGACGTCATTATACGATTATTTCTTTCCCTGAAATGTAATTGCACCTAA
CCGTAATCGGATTTTCATAGAAACGATGACATCATCACCCTTTTACGAGG
AAAGATTGAGTAGGCATGTGGATCAAAGTGGATTAAAACATCTAAGAGGC
TCCTTTCCCTTTGGATTAGTATGATCTCTCTTCCCTTACCGATACTCTTG
ATCACGTGTCTTTCTTTGATTTGAACTTATCCACCTTCTCATATCACATG
TCAAACTTTTTCATTAGATAGGAATTATAGACCAACAAAAAGTGAAAAAG
CCCTTTTTTACTGCTCAAATTAATTCTTAATGTGATGACAAACGACTTAA
GCAGGGGAGATCTCATTTTCATCTTTTGAAACTCTTCTCTTTTTGCAGTT
GGATATTACTGGCAACAGTGCTTACAAGTATGTCCATCCATGTGATCAAG
AGAATCTGGCAAAACAACTTGGTGGACAAGTCCCCTTGGAAGATATGGAG
ATTTTTGATGGTCTTTATTGTTCTGATACTTCCAGTTATGTTAAGAATCC
AAAACAAGGTTCGTGAACACATCTATCAATGAACCGAAAACATTCGCTTC
CTTAATTCGGAAGGGCCCAAGTCCAGGTACCTACCCCCCCCCCCTATCCC
AGTTCAAAAAAACCTTTGATTGTTATTTCCTCAAAATCGCGCAAATGGAC
TGAGGCCTCTTTGGAATTACGTTGGCGATGGGCTATCTAATTATCCATAC
CATCATCAATGACTTACCATAGAGTGCCAGACACGAGAATACTTTAGTGC
AACGACCTCGATTTAGTAGTAAACCACTTTAAGAACTGGAGTGATTTCAG
TTTTGTTGCGATTTGTAATATAGTAGCAAAGCTGTTTTTGTGTGTGTGCT
CTGTTAGGGCAGGTTATGGGGATTATTTTGAACAGCCCTAAAATAACAAA
AACTTAACTTTTTCTGAAAGCGGTGTACATATTTTGTGCATTGTTTGATA
CTAGTACTCTTTATTTTTCGTTCTTTATTGAAAGAGAAGAATTGCTTTAT
ATTTAGACAAAACCGGCCAAGCAAACATCGAAACACTTTTTACACTTGGA
GGGAATGAGGAAAAATAATTTTTTTAATGACTAATTAGATTTCAAATAGT
GTCATGCTGAGGACCACTTAATTTGGCTACGTCACGTGCAAAATAAACCA
ATGACGCATTACCATTGGGGCTTTCTACAGATTGACTCCATCTCCCCAAC
GATCACTGCCGGATTTAATTTTCCTAAAATAACACCTTAAATAATAGTAT
ATTCATGGTATGCACCATTGCAATGTCTTCCATTCCACCCAATAGCTGAT
TGGTTGAAAGTGACGTATTGACTGATTTTACGTCACTTACAACCAATGAG
CTATTGGTTCCGTGATGTAATGTCAGAAGACATTGCAGTGGTGCATATCA
TACATTACTGATTTCTTTTCAGCGTCGTGCGCAGAATTGGAGAGCACACC
ACATCGATCATTTTCGTTGAGAATGAAATCAACACTGACAAGTCGTGGTA
AAAGTGTCAACATCAATGCTTCAATCTATCGGGTAACTTAATATCTCTTC
TGTCTCAAATATATTCAGAATAATCTCTTTTCTTCTGGATTGTTTGTCAT
TTTAAGATACGCGCTTCTTTATGCAAGATCCAAAAATGTTTGTTGGGACT
AGGGCTCCTGTTTTTCTTTTTGTGGTACTTTGAGATTTTAAAATTGTTTT
TTTTCTTATTTCAGAGGCAAATTCAAAGTGTTTATAGGCAGCTTCATATT
ATTTTGACCCTTTATAAGATTAAATTACAGTCATTCCTGGCTCAGTTTTG
TTCTTAAATTGTTCTTATTTTTGACTTATTTAAGCCACATTGTTTATATA
AAATTGTTCTCATAAATAGTGTTCATTCTTCAGTTTCTTTTGTCTTGTCT
TTCCTCCCTTTGAACCATCACAAATTGTTGAGGTGCCAAATAAAAATCAT
CCAGTTGTAGAAATTAAATCAAAATTTGAGCTAGAGTGTTCTGAAAAACT
GGTCAAAATGCACTCCATTGTCTGGAGAATTGAACTTGCTATCTTACAAC
GTTTCTCGTTCATCAGGTTGTACACTGCGTTGGAACTATTCAGACGTACC
GAACAAAGCTGGGAACATCCAACGGTGCCATGACCCGCTGTCTATTGGCC
ATCGGAAGTCCCTTGTTATCCAGCGAGAGCTTCGAAGTACCGGCTGATGG
ACAAACTTTCGTCACCAAACATTCTTTGGATTTAAAAGTGACAGAAGCTG
AAGACTTGTGAGTGGCTTTCCTCTGATTTTAGATTTTTCTATAATTCGAT
CTATTTCTCAGTCCCCGTTGATGAATACCTTATACAAATACTTTCTATGA
TTCGAATCCCTCTGTAATTCGAACAAATAAGATTCCCCGATCGAATTCGA
ATTAGCGAGAGCCAACTTTATAAATGTTGATCTTTGGTGTGGCCTAAAAA
TGAAACATAATTTATAAAAAGAGTTGAGGAACAGAAGTCTAAAAACAGAA
ATTACAAAAATAGAATGATCTTTCGTATCACCCTGTATACCTGAAGGAAA
ATTTCACAAGAAAATAACTTCACTGAAACATGACATATGATAATTTTCTA
CTTTTCTTGTTCAGGGCTTCTGACTTATTGGGTTACAAATGTCGGGCGAT
GGTGAACACTTCGTGGTATCTGTATTCACACATGTGCGATACCAAAGTCA
TCAAAGAGTGCCATGAGAGCGCTTTGAAGAAGGGCCAAGCGGTGAGTGGA
TATTATCGCGTCTTGTTGAAAGATGGTGGATGGATCTGGATGCAAACCAA
AGCCAATGTGGTCTACCAATCATCCACTGGACAACCACAGTTCATTAGTT
GTGTACATTATGTCATCAGGTACTTATACCCTCTCAAGGGGTTCTCCGCA
TAGTATGTACGCAAGAATTTTCCAATTTTTGGTACCAAAGAACAAAAGAA
ATAACTTCATTTAAACAATAGACGTATGCTTCTTCTAAACACTCCTCTCC
CCCTTCACTGTGTACGTACTACTTGGATGGCCCCCAATGTATTACACCAA
ACAACAAGAAACTTTTTACTATTGGTGAAATAATGCAACATCTCATCAAT
TGCCTTTATCATGCATTTCACTGTATTTGTCTGTTCGGTGGTCTTTTTCA
GATTCGATACAGTATGCCTGTAGAAATGGTTTGATTGAAACAACCTTAGA
GATGACATAAATAAAACAGGTCAGATGACACTATCATTTCACGAAATTAT
TTCTTTTTACATTACAGTGGTATGGAGCTTGGTGAAGAAATCCTTTCGAT
TGAACAACTTTCCACTTTCAAACTGAATCAAAAGAAACGACAGCAATCAA
CCAAGAGAGAGGCTCCAACAACAACCTTCAAGAAGTTCTCCAAATCTGTC
ATCCACAAGAAAGAAGTCGCTCCAGTCCCTTTCAAAGCCATTCCATGCGA
ACAAATACCGGAAGCCATCTTTTCCGAAACCGATCTTCCTGAAGATCCAG
ATATGCCCGGATTGGAATTCTTGGATGTCGAAGAACAACTGCAATCATTC
CAACCGGAATTGGACAGCAGATCGCCGTTCATTCCCGGACCTTTCTCTGA
TTATGATTTGAAATCACGTGACATCAACACGCTGTTGGCGGATATTGATG
AAAATGAGCTGATTGATCGTGCTCCGTATATTCCACCACCCTGCATTGAC
AAGATCGTGTCTTTTGATGACCTATCCTTGCCAGATCTGACAGATAATTA
TCAAGATGCTCTCCAAGATTCTCCACCACTTCAAGAAGAGATGGCCGGAA
ACACTGCTGCTTTGATGGACCCTGTTGATTTCAACGGACAGATGTTCGAC
TACGGAAATGCCAAAGTTCCGGCCCACTTGTTGAAAAAGTTTATGCCTAT
GATGAGTGGTGGTGCGAAGAATGATTTCGCGTGAAGTTTTAAATGCAACA
CAGAAACAACATTATTTTAAATGGGAACGTATTTTAAGTGTGATTGACAA
AAGGACCATGAACCCCATTGATTGAGATGATGCAAAAACATTTTCATTTT
CGTTTATTGAAGTAGCAGGTGCTCTCAATTGTTTTTTAATCCATATTTAG
TTCGGCATTTTTATTTTATTTTTTTGATTTTAGTTTAAGGCGTTCTACTT
AAAATTCAGAATTTGGAATAGGCAATATTTGAAAAATGTAATATATTTTG
TCATGCAGTATGAATCTGTCAAATCAGAGATCCACACACTTTGGGACGCC
CATCCAGATAATCCCACTACACCTTTTTTACAACTTTGCATTTCATTTAT
TGGACCCATACACACCATCCACCCGACATTTTTTTACCTGAACGCTTTTG
TAGTATATTTCATTCTTTTATTTTTAAGATATATAGTCTATAACACGATA
AAACAATTTCAGGGTGTTTACGGGGTATTTATCTCTTGAAAATAAACCCT
TCAGAATCTTGAAAATTGCTAATTTTCGGGGAGAAACCTTGGAACTCCCC
TGAAAACATTTAATACCTTGGAGATTTCCTTTTAAAACTTCAATACCTTC
TGTTAGAAGTTCTCTGAAAACCTTGAAAAGCACGAGCTTTGTACCATGTA
CTTGTCTTGTTTTGGCTTAAGTCATTACAGCGTTTATCTACAAAGGTTTT
CTTGCTCGCTTTGCCCGGAACCAACTGTTTTGCAATAAGAAATATCTACC
ATTTTCATAATTCTTAATATTGAGAGACCTTCAACAAAAAGATTGGTCAA
ACGGCTAAAAAACACTTGAAAACCCATCTCGTCAAAAATGTCTGAAAGTG
GGGAAAAATTCCGTAGATACCCCGAAATCGCAGTCGATTTAAGCGCTTAT
CAAAAACCTCATAGACGAAATTGGCTTGAGGAGTGTATATGCTTAGTAGC
TGGAAGTTTGAGACAAGGGCTCTATAGAAAATGAAATTTCGCCAAAATAC
AATGTTTTGCGATCGTGCATATCTTTTCATTCAGTATATTAAACTATATC
GTCGTCCACATGACTTAAGGTTCAATCTCAAAATAAGTGTCTTGGAAAAT
TGGGAAGCTTTCAATTCTGTGCTGCCTTTGGCCTTTTTGTCATATAAAAA
CATTGATTATTCCTCTACATGAAAAAAGGGCAATCTCAATCTCAAAGATG
ACCACAAGAGTAAAACTTTAAATTTTGTAAGGTACTAATTTTGAGATGTA
ACCTTTAGTCATGTGAACGACGATATCCGCCTTAGTAATGTCTTTATAAC
AATGTAATGAGATTTTTTTTCTTTAGTTGGTGCAAGAATTTTATTCTTTA
AAAATCTTCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008629XLOC_008629Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015457-exon-sc0000211-1575043694:80986..81508TCONS_00015457-exon-sc0000211-1575043694:80986..81508Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1575043694:80210..80358TCONS_00015457-exon-sc0000211-1575043694:80210..80358Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1575043694:78651..78810TCONS_00015457-exon-sc0000211-1575043694:78651..78810Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1575043694:77627..77736TCONS_00015457-exon-sc0000211-1575043694:77627..77736Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1575043694:76902..77092TCONS_00015457-exon-sc0000211-1575043694:76902..77092Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1575043694:76290..76544TCONS_00015457-exon-sc0000211-1575043694:76290..76544Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1575043694:73847..75891TCONS_00015457-exon-sc0000211-1575043694:73847..75891Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1510915933:80986..81508TCONS_00015457-exon-sc0000211-1510915933:80986..81508Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1510915933:80210..80358TCONS_00015457-exon-sc0000211-1510915933:80210..80358Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1510915933:78651..78810TCONS_00015457-exon-sc0000211-1510915933:78651..78810Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1510915933:77627..77736TCONS_00015457-exon-sc0000211-1510915933:77627..77736Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1510915933:76902..77092TCONS_00015457-exon-sc0000211-1510915933:76902..77092Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1510915933:76290..76544TCONS_00015457-exon-sc0000211-1510915933:76290..76544Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1510915933:73847..75891TCONS_00015457-exon-sc0000211-1510915933:73847..75891Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1491911889:80986..81508TCONS_00015457-exon-sc0000211-1491911889:80986..81508Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1491911889:80210..80358TCONS_00015457-exon-sc0000211-1491911889:80210..80358Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1491911889:78651..78810TCONS_00015457-exon-sc0000211-1491911889:78651..78810Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1491911889:77627..77736TCONS_00015457-exon-sc0000211-1491911889:77627..77736Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1491911889:76902..77092TCONS_00015457-exon-sc0000211-1491911889:76902..77092Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1491911889:76290..76544TCONS_00015457-exon-sc0000211-1491911889:76290..76544Clytia hemisphaericaexon
TCONS_00015457-exon-sc0000211-1491911889:73847..75891TCONS_00015457-exon-sc0000211-1491911889:73847..75891Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000211supercontigsc0000211:73847..81508 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.2851	17.527	35.2648	37.6684	129.444	96.1576	128.886	147.066	124.426	141.996	119.783	119.362	145.795	151.125	115.356	143.557	71.5965	76.5334	94.3982	134.464	46.4778	45.5632	36.9032	41.793	58.6361	55.7827	75.9722	73.8321	55.4692	49.0959
Blast
[Close]
BLAST of TCONS_00015457 vs. Swiss-Prot (Human)
Match: HIF1A (Hypoxia-inducible factor 1-alpha OS=Homo sapiens GN=HIF1A PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 2.037e-71
Identity = 136/372 (36.56%), Postives = 217/372 (58.33%), Query Frame = 1 
Query:  337 QTKKKKSRDAARQRRGQQNDEFSELAAQLPLTLPPSEKLDRLCAMRLSNSFIKIKHVLQQIKDTNLMDKEFTDNL---FNAHIQNALGGFIFVLSEDGQVLYISPNVSENLGLQQLDITGNSAYKYVHPCDQENLAKQLGGQVPLEDMEIFDGLYCSDTSSYVKNPKQASCAELESTPHRSFSLRMKSTLTSRGKSVNINASIYRVVHCVGTIQTYRT-----KLGTSNGAMTRCLLAIGSPLLSSESFEVPADGQTFVTKHSLDLKVTEAEDLASDLLGYKCRAMVNTSWYLYSHMCDTKVIKECHESALKKGQAVSGYYRVLLKDGGWIWMQTKANVVYQSSTGQPQFISCVHYVISGMELGEEILSIEQ 1428
            + +K+KSRDAAR RR ++++ F ELA QLPL    S  LD+   MRL+ S+++++ +L      +  D +  D++    N     AL GF+ VL++DG ++YIS NV++ +GL Q ++TG+S + + HPCD E + + L  +         +GL        VK  K       E    RSF LRMK TLTSRG+++NI ++ ++V+HC G I  Y T     + G     MT CL+ I  P+    + E+P D +TF+++HSLD+K +  ++  ++L+GY+   ++  S Y Y H  D+  + + H     KGQ  +G YR+L K GG++W++T+A V+Y +   QPQ I CV+YV+SG+   + I S++Q
Sbjct:   16 ERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVMRLTISYLRVRKLL------DAGDLDIEDDMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKYMGLTQFELTGHSVFDFTHPCDHEEMREMLTHR---------NGL--------VKKGK-------EQNTQRSFFLRMKCTLTSRGRTMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPPMT-CLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQ 356
The following BLAST results are available for this feature:
BLAST of TCONS_00015457 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HIF1A2.037e-7136.56Hypoxia-inducible factor 1-alpha OS=Homo sapiens G... [more]
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