TCONS_00015430 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015430
Unique NameTCONS_00015430
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4125

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015430 ID=TCONS_00015430|Name=TCONS_00015430|organism=Clytia hemisphaerica|type=transcript|length=4125bp
aacNAGATTTTGTTGTATGTATCTGATGGAAATGCGCAAGGAGTGCAAGA
TCTACTAAGAGTTGCTTTAAACCAACCATCTCTTGTTGGAACAACAACAA
ATTTAAGTGACATCAAGGATGGAGAAGCTAAGCTTGTTGGAGAAATTCAA
GGTACAGAGGGAGGACATACTATTATTTCAGTTCCTGTTAGTAGCATTGC
AAGTGGCCTGGGTCCAACTGCCGAGGGAGGAATAATTCAAACAGATCATT
CGGAACACCAAGTTGTACAAGTTCAAATTCAGCAAAGTGATCCTTCTACT
ATAGACACCAAAACGCAATTGTTTCAACTTGCAGATTTAACTCATAATCT
AAATGCAGACGAAGTTGAGCAAGTTACTGCTCAGGTTGGTGTTGTTCATC
ATGGTGTTGAACTTGATGCAACAGAAGTTTTAAAATCAGAAGCTGATGCT
TTGATGGGTGACTTTATTATTGCAAATGTGGATGCtgctgaaaatgaaaa
gattCCAGGAGAGCTGAATATTGGCGATTCATTTTACTGCCTTGAAGATT
TGGAAGAATCATTACGACtctatgaagaaaaaaatgggaTAAAGCTTTAT
AAACGCGATGTCAGATCACTGGAGGCCTTGCTTAAAAGATCTTTGAAATT
GCAAAAGTTAGACAAGATAAATGAACGGTTGAAGTATGGGCAACTTCTCT
ATTGTTGTGTCTATGGTGGTAAAAGAAAAGCGCAGAAAATTGCTTGTATG
GATGAAAGTGGGCTTGCAAGATACACAGACTGTAAGATGTTTATCCGGTT
TGCTATTTCTGACGACGGCATGAAGTTGGTTGTCaatggaaaatttgaaa
ctCACAACCATGTGGAGGTTGTAACAAACGAGCAAGAACCAGAAGCACAA
TATTTCAGCAACACCGGAAATGCATCAGAGGTTCGTTTAGGCGCTGGTTT
CGTTGATCTTGAAGAACTTTATAAAGCAATCAATAAATACGAAACAGATA
ATCATGTTCATTTGTGGAGAAGAGACGGAAGGACAGTGGAAGCACTCGCT
AAAAGGGCACCGGGAACAGCGAGAAAAATCATGGAAACTAACCCAGGATT
ACGATTCGCAGAATTAAGATTTTGTTGTAGCTATGGTGGAAGACAATCTG
CAGAAGAGCGAAAAGATAAAAAGAATCCTCAAAACACTTTCAAGCAAGGA
TGCGAGATGCACATTCGTTTCGGAGTATCAGAGGACGGTTCACAACTGGT
CGTCAAATCCATGTCGGAAGAACACAATCACGAAATTAACGAGGAAACGA
TCGTGAAAGAAGCCTTACACCCAGATCTTTGTGTTTACGTTTCCAAATTG
GTCTGGCAGGATCTCCACATCTCTATCGATGACGTCAAAGCCAAACTGGA
AGATTACGTGCTCAGCGTCATGTTCAAAGGACAACAGCCGCCCCCACGAA
CACGACGTCAATATTTCCCGTCTAAAAAGCAAGTTCGTTATTTCATGGCC
AAAGCGAAGACCTCATTGAACATTTCACCTGAAGCCCAACAGAAGTTGGA
GTCGTTGATGGAGCGATTAAAAGAAGCACGATCGGACGAGAAAATGGTGT
CCAATTTTCACGTTCAAAACGTTATGAGCGGCTTCGATTTGAACAATGAA
GAAAGCATGGAAGAAGACGCAGCATCGCAATCCCTTGGTGGTTTGAACGA
ACAGAACGCCAAATTGTTGTTCTGTCACCAGACCCCGCAGCAACAACGTC
TCATGCGACGCTACAACACGCAAGTCATTATGACGCAGATATCCGACCTC
CATTCTAAGATTCCATTTCCCTTGTTTTGTTTATACGTGCAAACGAATGT
AGACTTTCAATTGGTGGGCGAATTCATTTGTCAAGCGAACGACCACATCA
TGATCGAGGAAGGCTTGCAGACCATCAAAGAATGGAACCCTGGGTGGAAT
CCCAAATTCGTGGTCGTCGATTTTGAGGACCAACAGATTACAGCTGTCGA
AAACGCTTTTCAAGGAGCGTTTGCTTTAGTATCAGATGCGTCTCGCGAAA
AAGCTTGGCATGAATGGCTCGATATGGAATCCAACGGTGTGGTCGAATTC
AAAGAGGATGTCATGAAATATCTAGACGCTATCGCTTTTTCATACTCCGA
AGAAACACTCAACAAAGCGGCGCGAGAACTTGAAGAAAGTGACGTTTGGA
AAATGTCCGACAAAATGAGAAATTGGTTTCAACTGAATTGGTTAGCGCAA
GCCAAGCGTTGGGTAGCAGGGTATCGACCAGATGATTACTTGATGGCCAT
TCACAATGACCGAACATTGAGCGATGAACTGAAGATGTTCAAGAGCATCA
AACTGGCTAACAAATCAGCACCACTTAACGATCTCATCCAACAATTGATC
GAGCATATTGTTCCAGTCTCCAAGAAACAGTACGAGCTGCTGAACAAGGA
CTCTTTCCGACTTCAAAACGAGTTGTACTATATCTACCCTGACATTCCAA
ACTATTTATCTAATCGACCAGGAAAACTAACCAAACACATTTACGAACGT
TTGAAAATAGCCAGCACTAGGAACTATTACATCACGGAAATCCATCCAGG
TATATTTTCAGTGCAAGGTTGCGAGGAGCCTGACGATCAACTACACACCA
TTTCGTACGGTGACACCACGAGTTATCCTTCTTGTGATTGTGAGGACTGG
CAACGTTTTAAATTACCATGCGTTCATTTGGCCGCCATCTTCAATTCTTA
CCCTGATTGGACATGGGACATGATGAGTGTTCCATACCGCACCAATCCCA
TCTTCCAAGCTGATTGGTCGGTTGTTTCGCAAGACATTCGAACGGACGCT
CCCGGTCTTCTCATTGACGTTGGCACGCAAACGACGGGAGCTACTTTGCT
GCCTGCTTACACGCCAGAGTTTTCGTTGACCAGGATGAACGACTCCCGTC
GACCAGCCGAAACACCGCAAGTATTAGCCAATCAATGTCGTGGATTACTT
CAACAAATCAGTAAACTGCAACTCGCGCACCACACCCGTGATAGCTTGTA
TAGGTTACGCTCAGAACTCAAAGAACTCGTTTCCATATTTTCGACAGCAC
CTAAGACGAAAGTGGTTTTCCCTATCTCGTCTATTCCCTTATCTAATAAA
AGTCGTAAACAGTCCGGTGCACAAACCGTTTTTGAACAGTACAATGTCAA
GTTGGTGACACCCAAGCAAGTAGCATTGAGCGGTAAAGTAAGTGAGACGA
CGACCATTCATACCACGGAAGCGGTCGTTTCGTCTCACCACCACCAACAC
CAAACACAACAAGAGATGGAGTCGGACGGTGACGAGGTAGACGGAATGTA
CATTTCCACTGTCAGTGAAGAACAGATTATCGAAGACCAGACAACAGAAA
CACTTGCTCACATCCCTGCAAACACCACTTCCACTACTTCAACAACGACT
CGCAAACGTGTTCAAAGCCCGTCACCTTTCTTTAAACAACAACCCTCGGA
AAAGAAAACACGCTTAATGACGGAAGACGAGATTTTGGCCGCCTCTCAGA
GTATCGCAGTGAAAACAACCGACCCGACGGAAAATGTTCTCAATGCAACG
GAGATGCAATTTCCAGCCAATGCAACTCTCTCTACGGTTATTGATGGTCA
AACCATCAATATATCTTTAGACCAAGTAGCAGCTGCAATGAACAATGCGA
AAATGGCCACCAACGCCGTCGAAGAAGCTGGAGACGGTGGCCACTCGCAA
GAAATCTTGACTTTCACAACGAACTCGTCAGCCGATATTTCGGACGAAAG
TGGTGCGCACGTGGTCGAGAATTTGGTGGTGGCTGAGGATGCGGGGATGG
TGGTAGCTGAGGaaacagaaaatgaaaatgaaactaTTAGTCAGCAggat
caaataaaaactgaTGACGAATCTGTGAAATGATTTCTttcgcaaatttt
ttatttcattccaCAATTTTTTTATCCAGATTATGTATCGTAGTATCTAG
AGATTTTTTGACTATTTATATTTGGAGACgtttaatatttgttttacTGT
GAAATACTGTCATTAAATTGATCCCATCGATCCCGTAATTTCTTTAATAA
GAATTTTTGCTTTACCCAAATGTTG
Run BLAST on NCBI

transcript from alignment at sc0000211:246051..262720+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015430 ID=TCONS_00015430|Name=TCONS_00015430|organism=Clytia hemisphaerica|type=transcript|length=16670bp|location=Sequence derived from alignment at sc0000211:246051..262720+ (Clytia hemisphaerica)
aacNAGATTTTGTTGTATGTATCTGATGGAAATGCGCAAGGAGTGCAAGA TCTACTAAGAGTTGCTTTAAACCAACCATCTCTTGTTGGAACAACAACAA ATTTAAGTGACATCAAGGATGGAGAAGCTAAGCTTGTTGGAGAAATTCAA GGTACAGAGGGAGGACATACTATTATTTCAGTTCCTGTTAGTAGCATTGC AAGTGGCCTGGGTCCAACTGCCGAGGGAGGAATAATTCAAACAGATCATT CGGAACACCAAGTTGTACAAGTTCAAATTCAGCAAAGTGATCCTTCTACT ATAGACACCAAAACGCAATTGTTTCAACTTGCAGATTTAACTCATAATCT AAATGCAGACGAAGTTGAGCAAGTTACTGCTCAGGTTGGTGTTGTTCATC ATGGTGTTGAACTTGATGCAACAGAAGTTTTAAAATCAGAAGCTGATGCT TTGATGGGTGACTTTATTATTGCAAATGTGGATGCtgctgaaaatgaaaa gattCCAGGTAAAATTTATTAAGAAGATGTATAATAAGGCGGTCATCTAA AAAATGTTCTATTTGCGTCACCCGCCTGCATcatattttttgctgatttt ccggtgcggagatatCCGGAAAAAAATccgggaaaagcaatttgttctat tactcttaggtgccaaataaacggtcccccccgcttgttaatttttcgaa aattttccaacccccccggaccttattaggacccccccgtttattNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttaa ttttaaagaatattttcagttggctaaaagaagtccccttattttgctcc aaaaagcctgattttagcctatatttaccttatttttgggttttcataag tataatttccaaccccccggcaattaggtccccccccgtttattgaaatt tcaaaaaattttccaacccccccgtttattcgaacccccccgtttatttg gcacctaagagtaaacttaaaaagtatagcttttttctcaattgatTCAG ACAACTTTCTTGAAGTGCTTGGAATAGATCTTTTCAATTGCTAATCAGGA TATCATataagatattttttcaatcagtgatttaGACCTTCCTATaggcc tttttttaaagaggcagccatgttggataattatgtactccagcataaaa acaatgatacagccatgcataattactgtttcatgcattttttaaaaatt atacatggctgtatcattgtttttatgctagagtacataattattcaaca tggctgcctcttgaaaaaaggtctattcttccAATCTCTAACGAAGGGTG TATTTTCAATACCATTAAACAGCTTGTTTCTGAATAATTTCAAAAGAGTT TGTGTTTCAGAGAGCTTGTAAAAGTTGCTAGAAGAAGTAAAGTAAATTTT TTGCAATTTGTTAAGGGGATGGGGATTagcaaaaacatgaaaatttatta attcaaaaaaaagaaataattttgacaaaaattggtTATATACTCATCTT TGCTTAAAAATGAGTGTTTCAACACGAGTCTTTGATTAATAATGTGGAAA CAGGAAAAgctttattttgatgaaaatcgtTTTATAAGTTTTGACAGGAA CTAATATGCttaatgaaatttcattttcagccCCAagctaccgtgagtgg tcctaaatccgacagccctgcttAAATCTGaccccccccaaataactgct atgaaaaaaattgcatgtttacaaacatttcccttccaagttgaacaata aattattgcaaaaactctcgaaacaaaacgtCTAACAAGATGACTTTAAT GTCAAGATGTTGTCAATTAAAATGTGATCagaaaagtgtgagttgtaaaa ataattacctctattattctattattctgaatctgttgctcctgtttaaa acgttaacaattttgtaataaaaaaaattatgttttgtgtaagaagcaat tattgttatttggttcaattggttcagtgtatcaaatctttcaagcttag ttgacactttggtatcttcattgcgtcacagcgaaagatttgtttttatt ttattttgtatctttgaaagaccccatcggatttaggcagggctgtcgga tttaggaccactcacggtatataGTTGTATTCAAACATCGTTAATTTGAC TTAGTTTCATTTTGGCTCTTACTTTTTTATGACTTCATCCACCCTGGGAA AGAAGTGCACTCaacttaagggaagaaattatgacgggaagaaaatttgg tggatttgatagatttttctgaaattcccacggaattaaattttttctgc catctgccaaatttaattcccgcaaaattaatttttttttattttatgtc agatttttcacattttaccCCCTATATCAATGTTTTCGCCCTGATTTCAG AACTTTATTTTTGTTCATTATGAGTTTTCTCAGCTTCAAGctatgcttag cattatgcttattttgAATTAAAGTATATGCAtgtaaacgttatgcttat aaaaagagtctataaacttttataaaaatttgttttgtctggaaaataaa tataaacCTGGCAACAGTACTTATTGAGATTGATGTCATGTACAAAATGT CAATACAAAACATTGCTTgacaatcaaataaaaatatttttggtggaTTA AGCGCCAGCTTGGTTTTGTCTATCcgaagggaagaaattttggatggaag aaaatttggtggaCTTGGTAAAAATCTGCCAAATCAAGTTCATCAAATTC AAGTTCATCatgccatccgccaaattaaacttcttctcttaaggtatttT CAAAGTGGCTGTACCAcaacattttccaaatttttgtcagTCTGACACAA ATGAACAAAAACCAATATTAAAAAAAGGACCCCTGAAAACTGCTTTAAAT GCAAATTTTcttctaaaatataaaatatacagTGTAACTTACAatgaaaa tctgatttttgaaattttcaaattttgggagTAATTTTAGGAGATTCAAT TATCCCGAAAGTATATATCAAATGGTTTTCTTATCTCCTAGGAGAGCTGA ATATTGGCGATTCATTTTACTGCCTTGAAGATTTGGAAGAATCATTACGA CtctatgaagaaaaaaatgggaTAAAGCTTTATAAACGCGATGTCAGATC ACTGGAGGCCTTGCTTAAAAGATCTTTGAAATTGCAAAAGTTAGACAAGA TAAATGAACGGTTGAAGTATGGGCAACTTCTCTATTGTTGTGTCTATGGT GGTAAAAGAAAAGCGCAGAAAATTGCTTGTATGGATGAAAGGTATATATc attgttttagttttttttgcataatattTTGAACCTTTTAAGCTCTTTAT TCGTCGAGATTAATAATGGTAATTTTGCTTCGTTATAGTGGGCTTGCAAG ATACACAGACTGTAAGATGTTTATCCGGTTTGCTATTTCTGACGACGGCA TGAAGTTGGTTGTCaatggaaaatttgaaactCACAACCATGTGGAGGTT TGTTATTTAAAATAATCGAACACATTTTAAGTGTTGTATTTAGCGCATgc ttttcatttatattttgaatTGATATTTTTCTCAGGTTGTAACAAACGAG CAAGAACCAGAAGCACAATATTTCAGCAACACCGGAAATGCATCAGAGGT TCGTTTAGGCGCTGGTTTCGTTGATCTTGAAGAACTTTATAAAGCAATCA ATAAATACGAAACAGATAATCATGTTCATTTGTGGAGAAGAGACGGAAGG ACAGTGGAAGCACTCGCTAAAAGGGCACCGGGAACAGCGAGAAAAATCAT GGAAACTAACCCAGGATTACGATTCGCAGAATTAAGATTTTGTTGTAGCT ATGGTGGAAGACAATCTGCAGAAGAGCGAAAAGATAAAAAGAATCCTCAA AAGTATGTTCTTTTTTCCCTCGACACATATCAAAGATGCAAACGCTGTCT CTCCTTTCTCCAAAATTGCTTAACATGTAAATTTTCTTtgcctttgtttt gattttctccgTTGCCGTCGAAAAAGAATGGCGCGGGCGTCGGCTCCGGT TCCACGTTTTGTTTACATGATCCGGTACCGGTGGGTGGATCgattttatt cgggtctgtaaaattGGCTTGAGTTTGTAAAATTTATTCGAACTTCAAGA TGGCGGCTACTTCTTGAAGAAAAAACGCAAAGTATTTATTCTTTCGTCGT TTTCAATGtagatttgttttttttgggcCGGAGAATTACAGCATCAAGGT AAGCTTTATTTTTCACTTTGCTTTATGTTTATTTCAATGCCCCAAAGTTT GAAGTCAAATGATGTAGAGTGGAAATTTGCTCGTTACAATTTAGAAACGA GATTATTTTGCCCTCTACGAATCAAACTCGAGCAGCggctactttcactt tcgttttttgtttgttttgattttgaatattGGAGTTTTTCACCAATCTT TCCATCAATATCTAGTAGTATCTAGTACACAATAATCTTctcaatagaca gctccagccTTTAAGGCCTTTTATTCTTGGTCTATAGGCGCTGCTATAGT AGGGAGGTTGGTCGatatttcaaactcattttcaaaaTGCCAAACCAAGT TTTAATGAAAAGCCCTTATCCTCAGAAAAAAATGCATGAGGCGAAGGGTC AGTTATCTTTTAACTTTTAGTAGTTTTTCAGATATTCCGTTTTGAAGTtc caattttttgaagatttaaaaatttgtgCGGGAAGTTTTGGCCGTGAGTG TTTTTCCGTAGTGCGTGCCATAGAGATGGGGCACACTATACCATTAACTT TCTCTTAATGCaactatcaaaacttttcaaagagcATCCCATCAGCACCA CATTGAACTACAAACTACGCGCAATTTCCCTCATGAGTTGACCCTGCCTG GCAAAGATTTGTTAATTGCTAAAGTAAACTGCTGCGAGTGGAAAGCGAAC CGCATTGTGAAAATAAGACCTCATGCCTTTTTCCGGTATTGCTTGATTCA CTTGATTTTCACATTCGGAAAACTAAAGAAACTTTACTTCATCAAGATTT GCAgcattgaccaaaatttcatgcaATTTCTCTGGCAGGCTCCTTGAAAA TTAACATCCTCAATAATAGTCATGCACAGCCTAATATTTTgcaaacaaaa gcaaaaattttgttatttttttcatagaatgtATGCTAGACCAGCGCCTT CTATAaggtactctcgggtgcctaataaacatacagaccaaaataaacgt acaggggagATAAtgaaattggaattaataaacgtatatacaggctgaaa taaacaTACAGGCAAGAAatcagaaccaaaataaataaacgtacaggcta aaATAAACATAAGAGAAAAATCtaccaattttttaaaagtagaACATCCA GGTTGAAACGACTGACTTAAGTATATATAAGTATATCTCTAATAGATCAA TGAAAAGTACTAAATAACCAAAACGTTTAAATTTACTCGTGTAACACTCG AAATCTCCCACAATGTAATTAACGGCCTTTCTACATATCTTActttaaca aaaaataacaaattttttccaGTATGAATTGGGCGATATTggttgaaaat aaataaacgcaCAGGagcagggggggggtcggtagtaaaatctcagacat aatgacgtttactacggtggtggtgtgacgaataatcaaaaaaaattttt actacccaggttagttaaatactaaaatgggtggtatttatgtgttaaat gttgaaaaaattttactacctgggtagttaaaactggtaaaattagcaaa tttagctatttttgtaattcttttaattttctgaatgacttttctgaaaa aaatctgaaaatttttataacttgaaaatattttctgttggaaagttgtt ggctgcaaacaaaaaattctcgagattttttgtcaatataaaaaagactt taattctaagggcaaaacattaatttttgcacaaagtgaaaaatgtgtca cagaaataatcatttttagcttttttgtaaaatcagtgcgaaaagcaacc aaaaaataggtggtctttatgacaaattgtcccaaaaacttttactacca gggtagtaaaatacctcttccaagagtctgggtggtggtatgtaaaaatt cataaaaatccttttactactcatatatgtctgagattttactaccgacc ccccctgaCAGGAGGGAATAcataaacgtacaggcgggaaaattcttcag aataaatAAATACAGGTTGTAATAAGGTGTgtacaggcgggaaatttgGC ACATGAAATATAAACGTAGTGAATTCTGTCACTTCaaagggcacccctta gatcaggccagaaagagtggcgccctcccctacctttgggtagatagctg ttgaaagaggagccttcaggtcgcctccgactgcggtcacagacttactt acttactttaaaCGCTTAGGGTGCTACAAATTTTGCAGCAAATCTCTAAT TGTTATTCAGGCTACATGAAATGCTGTAAAGTAGACCTACACCGTGAGAG GCCGTAAATCCAATGTATCTGACAACACTAACAGTTCTCCAAGTCATTGG GATCTGTACagccccaagatgtgacccctACCCTAAGATGTTTTAACCGT TTGCCTCAGGATGTGACCGCACTTGCCCTAAGATGCGATCCTAAATAGCT GCCCTAAGATATGAGCCACTTACCGCTAGATGTGACCCCAAAAAAATCAg tttctggtgaatgtgctggTGATGTTGATGGTTTTGGCAAATTCACTGGT GATGTTGATGGTTTTGGCAAATCTGCTcttggaattgatggttctggtga atgtgctggTGATGTTGATGGTTTTGGCAAATTCACTGGTGATGTTGATG GTTTTGGCAAATCTGCTcttggaattgatggttctggtgaatgtggtggt ggagttgatggttctggtgaatctgctggtggatttgatggttctggtga atctgctgGTGGATTTGAAGGTTTTGGCAAATCTGCTGAtgaagttgatg gttctggCAAATGTGGTGGTGGAGTTTATAGTTCTGGTGAATCAGCTTGA GGAATTGAAGTTTCTTGGGAATCTGAGACATGAGCTGCGTTTTTAACGTT TGCCCTATGTTTAAATTATCAGGTCTTCAAAAAAGTTACGGCAACTCGAA AGTACCTTTCCaaattaatcaaaattaaattgGGCTATATTTAATATGTG TATAGACATAATTTTTAATATGTGaagatatttttcgaaaataacaaTAA AGTTAACCTGTCATTGTTCAGGTGAAAATTCTTTTCCTTTCTACGCATTC TGGAAAGACAAAGCTTTTTTCTAGTTTAATTTTAAAACCTCTACAAAACG AGTTTTCCTTATCTGGTCAcataaaattcatgaaaatgaatgaatgatcG ATACAATGGCTAGTTAGCTTCTAGTGAGGTCTGTACTGAGAAATAATACC TGGGGTCAGGTAGCTagcagattcaccagaaccaatAACTCACTTTAATT TACAACTGATTTTTTCTTCGGTCACATCTTAGAGCAATTGGCTCACATTT TAGAGCAGCGCTTTGGGGTCACATTTTAGGGCGAGTGGGGTCACATGTTG GGGCAAACAGGTCACATCTTAGGGCAGGGGTCACGTCTTAGGGCTTTGca gggtctttcaaagatacatgctgaaataaaaacataccaTTCACTGTGAC ACAGCGACTAGGTACCAAAGTGTcgtccaatgtgaaaaagcaatgctttt ttttcaaagggccggtgggggtggaataagaatgtcatgggtggaaaatt tttgaaaaatcaattagCATTGATTAGGAGGACTGCTATTTTTCCTTGAT TGTTTTTTAAACATTAGAATTCTTTTTCTGGCAGTAGTTTTTTGGCCATC AGAATTTATGAAGTTGTGTCTGATTTGGATCTAGCATGATCATTAGTTGG TTGTTAAGCCTGAGAAAATCTCTGTGTAAGTGATTTCTACCTCAGTATGA TTAAGTGTGTGGAGATCGATTCATCAGGTTACTATTATATAGCTAGCTTA TTGTAAGTCTATAATGTTTTTTCCAATAAGAATCACAGCTACAATAGTAT AATTGTCGTTAATAAAAGGTCTATTTACATCAAAATATGATAAGTAAGGT TCCTTAACCCTTTGACTTGCTTGGTGAGATCTATTCTCCTGTACCAATGA CAAACGTCAATATGACCTTCATGGTTGAGTGAGATATCGCCATGTTGTTT TTAGACAATTAAAAcctattttaaaaacttcatgGTTCTAACCCTCTTCC TCGAAACATCAAGGTGACATCAAAATATTTATCCAAAATGTTTCAGTATG GGAAGATAATAAAGATTTGTCATACATATATTTGTAGGAATTTTTAGGGG TGGACAGTTCTACCCCTTCGCCGATTGTGAACCCCCTGAAAATGCTTATT TGTGACCAGTTTGTGTTTCAGTTTGGATGGCTCTTCTTCgatatacctta aaggaagaaattttggcggaaagaaaatttggtggatttggcggatttgg ccagaactcgccaaattaagttcccgccaaaatttcttttttcagccatc cgccaaattaaacttttggaaaatatgatctcttttaatagtagggggaa ttttgttcgattttttggaatcgcttgactgttttgttagaagcacttgt tatacatttttggaaagctaaggggtaggggaatcgaNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNaaagtttagaaacatgtaagaaa catttaaggctcaaaaggccgatttcttaagaaacattgaggctgcttgg gaaaactagtttcttaaaaaaacaaaacgtgtACATCTTTTTCTCACATT ATttcttattgtatttttttgggTTACCTTTTGCGTTGGCCACAACACTG AAAGTGTTTACTTGTTATTAGTTATAAAGCTAATATTTGTGATTCTTTAG ATGGATGCTGCCTTTGAAGCTATGAAAATTCGAATGAACAAAATTTNatt agctcgagaaaacggagacctgttgtatatttttggaaagctctcaaaat aataagattagagatatattgcaagtatatataggtgatttctgtaccta actcgagatattaacccttgaaaaccgtgtttttcagccagaaacagcta ttttgtccagtttttgcgctttttgaagctcaatatttCGTAATGAGTAA TTAGCTTAGTTGGTTCggaattttttgcagaaagatgcgtattcgcaatt tcccaaaacatggccgagttcgaatTTTGAGGTTGAggtttttccggttg aaaatgccggaaatcgccgtttttgcagattttcattggattttttttct atatttctatgtttttcacacaaaaacagtattgataacaatgctcacca tcaagcatgattcaattgtcaatataactgatttttgcgaccagaacttt ctatttatttttttccctacccccttccctctccccccatcaacattcaa tgatgaatttattgcgttatgcattttcgcaaaacgctagattttttgac agatttttttcatttttctcctcgcattgatatctaactttcatcatcag gtaggtccattcagcatctagcttgtttcatCTTTTATATATAGAGATAT TCATCTTTTCGGAAACAAAAATGTTGATCGACATGATTCttctatacacg ttttttttttcttaagaaacacacttttaagaaacatgaggctcagaatg cctaaaaactaagaaacatctaagaaacatgctgaggctgagaatgagaa aatagcaNTGAAGCTATGAAAATTCGAATGAACAAAATTTCGATGGACAA CCCTCAAGAGAGCGAGGAGACGGTCATTGATAGCGGTGTGGTGGCGGCAA TCCAAAATGAATGTGTGCCTATTGAAGCTGACCTGGtagaatttgagttt ttacCAGAACTCTCAGAGGAGGTGGCAACAGAGGAACGACCTATCAAAAT TGCTGACTACATTGCTTTCAGGTCGTACGATTTGTTTAATGAAACATTCA AAGgttatcaaaaatcttcgaTGGCGGCTTTCTGTACAGCAGCCAACTCA AGAAATTTTAGCCAATGTAGTAAGTATACTTTTGTATTTACAACGATATC TTTCTTATTTCAACCCTGAACTGATCTCTCACTGATTCAATTATTGAAAG ACCTTTAGCTGGTGAAGTGAACGGTTTTATTCTGCGTTATGAAATAATTA TCACTCTGATCCTTAAACTTTGTTTTAATTCTTTTATCCAACAGCCACAC TGAAGGAAATCCTTGACGAACCAAAGAAGGAGAAATTAGAAAAAGGTACC GGATGTGGATATCCATTCATTCGATGGGAAGTCGGTACTGGAGAACTCCC TATACCTTTTCTAGGCTTCCCTTTCATTATTGTTGGCAACTCAAGATATA TGTGCAGTCAAGGGAAGGACATCAACGTCTCTACTAAAGACAAAGTGCGC CAAAAGAGACTGTCAATGGGTGAAACTGTATACACTAGAAATTTAGCAAG ACCGACAAAAAAGATGGGATGCCCAGTTCGAATGGTCTGCAAGAAACTGT TTGTTTTTCCAGACTTTATCATCAACAAAGACACCAGAAAGAATCGTACC AGCATTTCTGCTAAGCTCAGGAAATGTTTTGACGAATACTCTAAAGCTGT AGAAGAAGGGAATTGCCCTGCTGACCAAAACCTCGGTTACTTGTTGTACG TCACCAAGTTTCCAAAACCGAACAATCATCAGTTCCATTTGGAATTCTCC AACACTCTGAATGTAAACAACGAAAACACAAATGAGGACCAGGAGCATGA AGATTGCCAAAAACTTTGTATGGGCGCGAAATTTGATACTGTCAAAGATA TGGAGTCAGCTTTGCGCAAATACAAAATGGACAATAACACTCGTCTCTAT TCTGATATCAAAGAAGTAGTTTTGTTAGAGCCGAAGGGACCCTTAATCTA TAAATCAATCACATACAAATGTATGCACGTGGTCTCTGTTCCTCATAAGA AGAAAAAGAACAGGCGGTAAGCTGGCTCAATCTTCTACGGATTGCCTTTC GGAATGATGCTGTGGTTAATGTTGCTGCGTGGAACGAAACCATCTTTTGC GCCCGCGAATAATCGAGAACGGCAACGGAGAAAACTGTCTTTTTCTTAAG TGTTTATTCTAAAGTTATTGATGTATGTTAATCACATAAAAATGTGATCT CTTActattttttcatttgtaaaCTTTCCTGTTCACTTTTGCAGCACTTT CAAGCAAGGATGCGAGATGCACATTCGTTTCGGAGTATCAGAGGACGGTT CACAACTGGTCGTCAAATCCATGTCGGAAGAACACAATCACGAAATTAAC GAGGTAAGTCAAGTCAAGTTGTTCTTAAACGTTCAGAATTTAGAAATACt ccttggtcaaaattttgaacgCGAAACTAGAAGTATTCGCCAAACGAAAG TATAATGTACTCAAATTAAAGCATGTCGATGTCCTAACCGTTcgtaaggg aactaatttttcaCGAGAactaatttgagaaaatttggaCGAAACTCATC AAGTCACCATAACAATTTCTCTGCGAGATTTGANAAGAAAATTTGGACGA AACTCGTCAAGTCACCATAACAATTTCTCTGcgagatttgattaaaaaaa ttcctcCAAATGAATTTCAAAAGATATCTCTTCCGTAATTATTGATTAAT GACCTCTCATTCTCTTTTCTTTATTATCTTGAGCGTtagatgtttttttc ttcttcatctacAGGAAACGATCGTGAAAGAAGCCTTACACCCAGATCTT TGTGTTTACGTTTCCAAATTGGTCTGGCAGGATCTCCACATCTCTATCGA TGACGTCAAAGCCAAACTGGAAGATTACGTGCTCAGCGTCATGTTCAAAG GTTAGTTCGCTCAACTGCTGTTTGCAAAGCCACATTCCGAATATATCTAT TCGCTGACTATTCTTACTCCCAAATTGCTTTTCCAATTGCGAGTGTTCGG TTATGTTAAAGGTTATTTTGTCAGTCTACCACATTGTCTAccagtacaca tttttttatattgatattTATTATATACTTAAAGGACAACAGCCGCCCCC ACGAACACGACGTCAATATTTCCCGTCTAAAAAGCAAGTTCGTTATTTCA TGGCCAAAGCGAAGACCTCATTGAACATTTCACCTGAAGCCCAACAGAAG TTGGAGTCGTTGATGGAGCGATTAAAAGAAGCACGATCGGACGAGAAAAT GGTGTCCAATTTTCACGTTCAAAACGTTATGAGCGGCTTCGATTTGAACA ATGAAGAAAGCATGGAAGAAGACGCAGCATCGCAATCCCTTGGTGGTTTG AACGAACAGAACGCCAAATTGTTGTTCTGTCACCAGACCCCGCAGCAACA ACGTCTCATGCGACGCTACAACACGCAAGTCATTATGACGCAGATATCCG ACCTCCATTCTAAGATTCCATTTCCCTTGTTTTGTTTATACGTGCAAACG AATGTAGACTTTCAATTGGTGGGCGAATTCATTTGTCAAGCGAACGACCA CATCATGATCGAGGAAGGCTTGCAGACCATCAAAGAATGGAACCCTGGGT GGAATCCCAAATTCGTGGTCGTCGATTTTGAGGACCAACAGATTACAGCT GTCGAAAACGCTTTTCAAGGTAACTAACTCATTTATGGATtaccattttt atttcataAGTCTAGCGTAAATAAAAGTGAATTCCTTGATTGATGATCCA AATTTGAACCTTTTTTTAGGAGCGTTTGCTTTAGTATCAGATGCGTCTCG CGAAAAAGCTTGGCATGAATGGCTCGATATGGAATCCAACGGTGTGGTCG AATTCAAAGAGGATGTCATGAAATATCTAGACGCTATCGCTTTTTCATAC TCCGAAGAAACACTCAACAAAGCGGCGCGAGAACTTGAAGNATTTTGTCA GTCTACCACATTGTCTAccagtacacatttttttatattgatattTATTA TATACTTAAAGGACAACAGCCGCCCCCACGAACACGACGTCAATATTTCC CGTCTAAAAAGCAAGTTCGTTATTTCATGGCCAAAGCGAAGACCTCATTG AACATTTCACCTGAAGCCCAACAGAAGTTGGAGTCGTTGATGGAGCGATT AAAAGAAGCACGATCGGACGAGAAAATGGTGTCCAATTTTCACGTTCAAA ACGTTATGAGCGGCTTCGATTTGAACAATGAAGAAAGCATGGAAGAAGAC GCAGCATCGCAATCCCTTGGTGGTTTGAACGAACAGAACGCCAAATTGTT GTTCTGTCACCAGACCCCGCAGCAACAACGTCTCATGCGACGCTACAACA CGCAAGTCATTATGACGCAGATATCCGACCTCCATTCTAAGATTCCATTT CCCTTGTTTTGTTTATACGTGCAAACGAATGTAGACTTTCAATTGGTGGG CGAATTCATTTGTCAAGCGAACGACCACATCATGATCGAGGAAGGCTTGC AGACCATCAAAGAATGGAACCCTGGGTGGAATCCCAAATTCGTGGTCGTC GATTTTGAGGACCAACAGATTACAGCTGTCGAAAACGCTTTTCAAGGTAA CTAACTCATTTATGGATtaccatttttatttcataAGTCTAGCGTAAATA AAAGTGAATTCCTTGATTGATGATCCAAATTTGAACCTTTTTTTAGGAGC GTTTGCTTTAGTATCAGATGCGTCTCGCGAAAAAGCTTGGCATGAATGGC TCGATATGGAATCCAACGGTGTGGTCGAATTCAAAGAGGATGTCATGAAA TATCTAGACGCTATCGCTTTTTCATACTCCGAAGAAACACTCAACAAAGC GGCGCGAGAACTTGAAGAAAGTGACGTTTGGAAAATGTCCGACAAAATGA GAAATTGGTTTCAACTGAATTGGTTAGCGCAAGCCAAGGTATGACTCCTA CATCTTTCCATCAAacaatttctcttttgtttAAGGCCTCTCGTTTGAGA AGTTGCCAAAAATTACCCACCCAGTGTTAGTGAGGGGTGTAAATGTTGTA AGTAAAGGTGTTAGCACGACGGACCTCGCCATACGCTCATTGACCGCGTC ATTGCTACCCTCAATAAGGACGTTACAATGTAAGAACACTCTTTTTGATC TAGTTCAAGGCGCataataatcgcttgtggtttctATTAAGTGtcattag ggaaattccctctTTTACTGAGATATGAtttttgtgattattttttttct cagagtaattttttaaataatattttacaCATCAATTGAACAAACGGAAT TGCATTTTTCGGAACCTTTTTACAGCGTTGGGTAGCAGGGTATCGACCAG ATGATTACTTGATGGCCATTCACAATGACCGAACATTGAGCGATGAACTG AAGATGTTCAAGAGCATCAAACTGGCTAACAAATCAGCACCACTTAACGA TCTCATCCAACAATTGATCGAGCATATTGTTCCAGTCTCCAAGAAACAGT AAAAAGCTCTCCTTCGCTTCTTCGAATCTTCCTATTTTCCGATTTGACta cctttttataagaacacactTTGTAAGAAAGTTAAGGAATGTCCTAAGAA TATTCCCCAAACCTATTTATTCTGTCGACAAATTTTTTTAGAGTCCACTG AGTAGACCAATAGCATCATGGGTTTTCTTCtaattttctaatattttata aatttaggaATTGCCAATTTTATTCAATTGTTGTGTGCTCTTCTGACTTC CGTTTCCAAATATTTCTTTCACAGGTACGAGCTGCTGAACAAGGACTCTT TCCGACTTCAAAACGAGTTGTACTATATCTACCCTGACATTCCAAACTAT TTATCTAATCGACCAGGAAAACTAACCAAACACATTTACGAACGTTTGAA AATAGCCAGCACTAGGAACTATTACATCACGGAAATCCATCCAGGTATAT TTTCAGTGCAAGGTTGCGAGGAGCCTGACGATCAACTACACACCATTTCG TACGGTGACACCACGAGTTATCCTTCTTGTGATTGTGAGGACTGGCAACG TTTTAAATTACCATGCGTTCATTTGGCCGCCATCTTCAATTCTTACCCTG ATTGGACATGGGACATGATGAGTGTTCCATACCGCACCAATCCCATCTTC CAAGCTGATTGGTCGGTTGTTTCGCAAGACATTCGAACGGACGCTCCCGG TCTTCTCATTGACGTTGGCACGCAAACGACGGGAGCTACTTTGCTGCCTG CTTACACGCCAGAGTTTTCGTTGACCAGGATGAACGACTCCCGTCGACCA GCCGAAACACCGCAAGTATTAGCCAATCAATGTCGTGGATTACTTCAACA AATCAGTAAACTGCAACTCGCGCACCACACCCGTGATAGCTTGTATAGGT TACGCTCAGAACTCAAAGAACTCGTTTCCATATTTTCGACAGCACCTAAG ACGAAAGTGGTTTTCCCTATCTCGTCTATTCCCTTATCTAATAAAAGTCG TAAACAGTCCGGTGCACAAACCGTTTTTGAACAGTACAATGTCAAGTTGG TGACACCCAAGCAAGTAGCATTGAGCGGTAAAGTAAGTGAGACGACGACC ATTCATACCACGGAAGCGGTCGTTTCGTCTCACCACCACCAACACCAAAC ACAACAAGAGATGGAGTCGGACGGTGACGAGGTAGACGGAATGTACATTT CCACTGTCAGTGAAGAACAGATTATCGAAGACCAGACAACAGAAACACTT GCTCACATCCCTGCAAACACCACTTCCACTACTTCAACAACGACTCGCAA ACGTGTTCAAAGCCCGTCACCTTTCTTTAAACAACAACCCTCGGAAAAGA AAACACGCTTAATGACGGAAGACGAGATTTTGGCCGCCTCTCAGAGTATC GCAGTGAAAACAACCGACCCGACGGAAAATGTTCTCAATGCAACGGAGAT GCAATTTCCAGCCAATGCAACTCTCTCTACGGTTATTGATGGTCAAACCA TCAATATATCTTTAGACCAAGTAGCAGCTGCAATGAACAATGCGAAAATG GCCACCAACGCCGTCGAAGAAGCTGGAGACGGTGGCCACTCGCAAGAAAT CTTGACTTTCACAACGAACTCGTCAGCCGATATTTCGGACGAAAGTGGTG CGCACGTGGTCGAGAATTTGGTGGTGGCTGAGGATGCGGGGATGGTGGTA GCTGAGGaaacagaaaatgaaaatgaaactaTTAGTCAGCAggatcaaat aaaaactgaTGACGAATCTGTGAAATGATTTCTttcgcaaattttttatt tcattccaCAATTTTTTTATCCAGATTATGTATCGTAGTATCTAGAGATT TTTTGACTATTTATATTTGGAGACgtttaatatttgttttacTGTGAAAT ACTGTCATTAAATTGATCCCATCGATCCCGTAATTTCTTTAATAAGAATT TTTGCTTTACCCAAATGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008619XLOC_008619Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015430-exon-sc0000211-1491911889:246051..246558TCONS_00015430-exon-sc0000211-1491911889:246051..246558Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1510915933:246051..246558TCONS_00015430-exon-sc0000211-1510915933:246051..246558Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1575043694:246051..246558TCONS_00015430-exon-sc0000211-1575043694:246051..246558Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1491911889:249142..249391TCONS_00015430-exon-sc0000211-1491911889:249142..249391Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1510915933:249142..249391TCONS_00015430-exon-sc0000211-1510915933:249142..249391Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1575043694:249142..249391TCONS_00015430-exon-sc0000211-1575043694:249142..249391Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1491911889:249489..249597TCONS_00015430-exon-sc0000211-1491911889:249489..249597Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1510915933:249489..249597TCONS_00015430-exon-sc0000211-1510915933:249489..249597Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1575043694:249489..249597TCONS_00015430-exon-sc0000211-1575043694:249489..249597Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1491911889:249686..250002TCONS_00015430-exon-sc0000211-1491911889:249686..250002Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1510915933:249686..250002TCONS_00015430-exon-sc0000211-1510915933:249686..250002Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1575043694:249686..250002TCONS_00015430-exon-sc0000211-1575043694:249686..250002Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1491911889:257495..257603TCONS_00015430-exon-sc0000211-1491911889:257495..257603Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1510915933:257495..257603TCONS_00015430-exon-sc0000211-1510915933:257495..257603Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1575043694:257495..257603TCONS_00015430-exon-sc0000211-1575043694:257495..257603Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1491911889:258015..258150TCONS_00015430-exon-sc0000211-1491911889:258015..258150Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1510915933:258015..258150TCONS_00015430-exon-sc0000211-1510915933:258015..258150Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1575043694:258015..258150TCONS_00015430-exon-sc0000211-1575043694:258015..258150Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1491911889:258335..258919TCONS_00015430-exon-sc0000211-1491911889:258335..258919Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1510915933:258335..258919TCONS_00015430-exon-sc0000211-1510915933:258335..258919Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1575043694:258335..258919TCONS_00015430-exon-sc0000211-1575043694:258335..258919Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1491911889:259947..260188TCONS_00015430-exon-sc0000211-1491911889:259947..260188Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1510915933:259947..260188TCONS_00015430-exon-sc0000211-1510915933:259947..260188Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1575043694:259947..260188TCONS_00015430-exon-sc0000211-1575043694:259947..260188Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1491911889:260576..260748TCONS_00015430-exon-sc0000211-1491911889:260576..260748Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1510915933:260576..260748TCONS_00015430-exon-sc0000211-1510915933:260576..260748Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1575043694:260576..260748TCONS_00015430-exon-sc0000211-1575043694:260576..260748Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1491911889:261025..262720TCONS_00015430-exon-sc0000211-1491911889:261025..262720Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1510915933:261025..262720TCONS_00015430-exon-sc0000211-1510915933:261025..262720Clytia hemisphaericaexon
TCONS_00015430-exon-sc0000211-1575043694:261025..262720TCONS_00015430-exon-sc0000211-1575043694:261025..262720Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000211supercontigsc0000211:246051..262720 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.2679 9.35664 2.20287 0.218394 10.3313 11.5437 3.2116 4.83054 6.43692 1.27776 5.51472 3.45579 3.70954 0.714766 3.80501 1.79258 5.46216 7.0165 1.97923 1.22561 5.50415 5.23248 19.2419 7.48228 3.44097 3.83843 1.59619 0.94319 14.7505 8.16652
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015430 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top