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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015330 ID=TCONS_00015330|Name=TCONS_00015330|organism=Clytia hemisphaerica|type=transcript|length=3004bp
tgcctgtttttctgtttttttagaattaatatccaaagtcagaaaatcct
CTTGCAATCAAAGGTAAAATATTAGGGGTAatgtatgaaaatattttctt
tttagtttaGGTTACAAAATATAACAATGGATCATTTTCTAAATGAAGCA
AAACGTCTGGTACAGCGGTTACAACACCATGACAATGCAgttgatatttt
gattggtgaaacaacaaatcttcaaaataaattgaTTGCTATGAGACAAT
ATAAAGATGAAGTTGTTAAAATGAATCAATCTGCAAACCATCGACCGAAA
AGTACACTGATTCTTGGCAGTCAGCTTGAGAATCAAAGAATACAGAGCCT
AGAACAGGAAAACCGAGAATTGAGCATTTCACTTGCAGAACATCAATCTG
CACTTGAGTTGATTATGAATAAGTACAGAGAGCAAGTGGTGGTAATGATT
AAAGCAAATGGAACAAACTTGGCTCTGTCGCCAAGCTTTAGTCAACCAAG
TGAAAAAGAACGCCAATTGAATGAACAGATTGCTGAAATGGCATATGTGA
TGAGACAATCCGCTTCCATTGATGAAAATCATGCTGCTAAAGAAATTGAA
ACCATACGTAGCCTTCAAGTAGAGAACGACAACTTACGACAACTCCTACA
AATTAGTGGTCAAAGTTTGAAACAGAGCAATAATGAAACTCCACCTAATG
ATTCAGCTATTTCTTCACAAAGTTCCTTAGCAACTCAACCACCAGTCCCA
AAAATATCTCAAATGCAACATCAGTCAATTGAAGAGGTTGATACAAAAGA
CAGTGGAATTTACGACGAAGAATATTCTCCAAATTTTGACTTATTTaaaa
agggaaagaaaaggAAACCTTTGAATACATCAAGACATGTTGATAAATTG
GAAAACCTTTTTAAGATGCCTTCAACTTTACATAAATCGCCAGCCCCGAC
TGAAATTGATATTCTTGAAAacagttttgataaaaattctaCCAATGTGA
AACTTGAGAAGGAAACTGAAAACCAATTAGAGGATTTGGATCAAACAGAT
CATCAAGAGGAAAAACAACATCAAATGTACACAGTAGAAGCACTCATTGA
GAATAACATATCTGATAAAGATGATGAAGACTTACAATTAACAAACGGAC
atttggaagaaaatttattgattgatgATTTGGACGCTTTACTTGAGCAG
GAGTTTGATGATGCGGATTTCGATTCAGAACCTTCAGAATCTCATGAATC
AAACTTGAACAATGATTTTAAAGATGTcattttaaataattccttCCAAA
AGAAAACAGATAGCTCTTCAAAATACAAAACACAGTTAGATGAAAGTGAT
GCattgaaatttttggatgaTGCGTTGGATTCTTCTGAAGAATCTGATAA
TGACGACAATAACAAAGAATTGTGTGCTGACACTATAAGTCTGAAGgaaa
ataacaattcaaaagtACATCATGAAGAAAACTCTATATCTGATACTCAT
TCAACCTTGTTGAAGGAGGAAGCAGCAGAAGCTCCAGATGAGATGGATGT
TCTTGATTTTCTGGATAACTTCGATAAAGAAATTGAGGATGATGATTGTA
GTGAGACACAATCTGAAGCAGAATCTGAGGTTACGATAATTGACACGAAT
CAGGAGGATGACACAATGGCATTGTTTGATTCTGTTCTGGAGGATGACGA
TTCTCCACTCAGCGAGGATGAAGGGAATGACTGAAGTGTATCTGAAAAAT
TAAACCATTGAGAAGTATAATTGTTGTGTATGCGTTGCTTCACAGTATGT
GCCAGCAAGAGATAAAAactgaaaataaaaacaacaaacatcATGGAGGT
CGACAAAGATGATTTCCTGGAGTTGGGAGTTCAAGAGAATGATTTGATTG
ATGATATTGAAATGTCAGATGACGAACTGAATGTCGAATTGGAAATGCTG
AATAAGCAAGAAAATGTTAAGTGGGAGATCAAAGCAGAAATTAAGACGGA
GGAAGGGGAGTATgcagaaaatcaaaatgaatttaaaacagaAATAAAGA
CAGAATTTGCAGAATGTGTCAAACATGAATCTGCAGAATGTGTCAAACAT
GAATCTGCAGAATGTGTCAAACATGAATCAGATCAGCAAGACGATAAATA
TGCTAcaaacaagaaaataataaaagtaAGACCCTCTTCACCTTCcacaa
aaacaataaacaataaTAACAGACCCAAACAAAGGAACAGGGACGATTAT
GGGGACATTCAACTTGACAAGAAACGATTGTATAAGCCTTTATATGTTGA
TAAAAACACTGACCCTGTTGTGGTGGGCCGAGAAATTTCATATCGTTTAC
AGGAAAAGAAATCGAACTTGATCAAAAATGTTGTAAGAGTAATCGGTATT
TCAATGTCGGTGGAAGTATTTCAAGAAACAAAGAAGATAGTGAAATCAGG
TGGATTAAAAACAGATGATGGTCAGCGCAAACGTTCCCCTGGTGGAACAT
ATCTTTACATTCTCAAGAATCGAGGATACGCCTCAACTAcacaaatgaaa
gaaatttttaaagttgAGAATGAACGGCACAAAGAGAAACGCAAATATAa
agcacaaaaattaaaaaatcatcaaaggAAATCAATCAAAGTGGAAAAGC
AGGATGAAAAGCCCAAAGCGAAAGTGGAAGAATGAATAATTGGTTATTTT
GAAATCATCTCAATGAGTACCCAAACTTTTCACCGCCCTGATCTAGACCA
AATAATATTCGGCTCATAGCATATTTTCtgcattctttttcaaatgaCCA
CCTATACAATAAATAAGTAAAGCCCTCGGTTGTTTAGACCCAATTTAATA
GTTATCCCTTACTATAAGATGGGTTTAAAATTTAGTtatcttttttaagt
tttaattagtttttgtaattattatacaGTTCAGTAGAGTTTTTTTACAA
TTGACAAGAAATAAACTATTTGTTGCAGCTTAATGAAGCtgcttttactt
tttt Run BLAST on NCBI protein sequence of TCONS_00015330-protein >TCONS_00015330-protein ID=TCONS_00015330-protein|Name=TCONS_00015330-protein|organism=Clytia hemisphaerica|type=polypeptide|length=535bp
MDHFLNEAKRLVQRLQHHDNAVDILIGETTNLQNKLIAMRQYKDEVVKMN
QSANHRPKSTLILGSQLENQRIQSLEQENRELSISLAEHQSALELIMNKY
REQVVVMIKANGTNLALSPSFSQPSEKERQLNEQIAEMAYVMRQSASIDE
NHAAKEIETIRSLQVENDNLRQLLQISGQSLKQSNNETPPNDSAISSQSS
LATQPPVPKISQMQHQSIEEVDTKDSGIYDEEYSPNFDLFKKGKKRKPLN
TSRHVDKLENLFKMPSTLHKSPAPTEIDILENSFDKNSTNVKLEKETENQ
LEDLDQTDHQEEKQHQMYTVEALIENNISDKDDEDLQLTNGHLEENLLID
DLDALLEQEFDDADFDSEPSESHESNLNNDFKDVILNNSFQKKTDSSSKY
KTQLDESDALKFLDDALDSSEESDNDDNNKELCADTISLKENNNSKVHHE
ENSISDTHSTLLKEEAAEAPDEMDVLDFLDNFDKEIEDDDCSETQSEAES
EVTIIDTNQEDDTMALFDSVLEDDDSPLSEDEGND Run BLAST on NCBI transcript from alignment at sc0000210:387310..392970+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015330 ID=TCONS_00015330|Name=TCONS_00015330|organism=Clytia hemisphaerica|type=transcript|length=5661bp|location=Sequence derived from alignment at sc0000210:387310..392970+ (Clytia hemisphaerica)
tgcctgtttttctgtttttttagaattaatatccaaagtcagaaaatcct
CTTGCAATCAAAGGTAAAATATTAGGGGTAatgtatgaaaatattttctt
tttagtttaGGTTACAAAATATAACAATGGATCATTTTCTAAATGAAGCA
AAACGTCTGGTACAGCGGTTACAACACCATGACAATGCAgttgatatttt
gattggtgaaacaacaaatcttcaaaataaattgaTTGCTATGAGACAAT
ATAAAGATGAAGTTGTTAAAATGAATCAATCTGCAAACCATCGACCGAAA
AGTACACTGATTCTTGGCAGTCAGCTTGAGAATCAAAGAATACAGAGCCT
AGAACAGGAAAACCGAGAATTGAGCATTTCACTTGCAGAACATCAATCTG
CACTTGAGTTGATTATGAATAAGTACAGAGAGCAAGTGGTGGTAATGATT
AAAGCAAATGGAACAAACTTGGCTCTGTCGCCAAGCTTTAGTCAACCAAG
TGAAAAAGAACGCCAATTGAATGAACAGATTGCTGAAATGGCATATGTGA
TGAGACAATCCGCTTCCATTGATGAAAATCATGCTGCTAAAGAAATTGAA
ACCATACGTAGCCTTCAAGTAGAGAACGACAACTTACGACAACTCCTACA
AATTAGTGGTCAAAGTTTGAAACAGAGCAATAATGAAACTCCACCTAATG
ATTCAGCTATTTCTTCACAAAGTTCCTTAGCAACTCAACCACCAGTCCCA
AAAATATCTCAAATGCAACATCAGTCAATTGAAGAGGTTGATACAAAAGA
CAGTGGAATTTACGACGAAGAATATTCTCCAAATTTTGACTTATTTaaaa
agggaaagaaaaggAAACCTTTGAATACATCAAGACATGTTGATAAATTG
GAAAACCTTTTTAAGATGCCTTCAACTTTACATAAATCGCCAGCCCCGAC
TGAAATTGATATTCTTGAAAacagttttgataaaaattctaCCAATGTGA
AACTTGAGAAGGAAACTGAAAACCAATTAGAGGATTTGGATCAAACAGAT
CATCAAGAGGAAAAACAACATCAAATGTACACAGTAGAAGCACTCATTGA
GAATAACATATCTGATAAAGATGATGAAGACTTACAATTAACAAACGGAC
atttggaagaaaatttattgattgatgATTTGGACGCTTTACTTGAGCAG
GAGTTTGATGATGCGGATTTCGATTCAGAACCTTCAGAATCTCATGAATC
AAACTTGAACAATGATTTTAAAGATGTcattttaaataattccttCCAAA
AGAAAACAGATAGCTCTTCAAAATACAAAACACAGTTAGATGAAAGTGAT
GCattgaaatttttggatgaTGCGTTGGATTCTTCTGAAGAATCTGATAA
TGACGACAATAACAAAGAATTGTGTGCTGACACTATAAGTCTGAAGgaaa
ataacaattcaaaagtACATCATGAAGAAAACTCTATATCTGATACTCAT
TCAACCTTGTTGAAGGAGGAAGCAGCAGAAGCTCCAGATGAGATGGATGT
TCTTGATTTTCTGGATAACTTCGATAAAGAAATTGAGGATGATGATTGTA
GTGAGACACAATCTGAAGCAGAATCTGAGGTTACGATAATTGACACGAAT
CAGGAGGATGACACAATGGCATTGTTTGATTCTGTTCTGGAGGATGACGA
TTCTCCACTCAGCGAGGATGAAGGGAATGACTGAAGTGTATCTGAAAAAT
TAAACCATTGAGAAGTATAATTGTTGTGTATGCGTTGCTTCACAGTATGT
GCCAGCAAGAGATAAAAGTACGTAGTAATAAGAACATGAGGTTCATACAT
TCTATTAAAGATTTCATTAAACAGATGGTTTTATTATTGAATGGAAAACT
GATTGGAAAtgtaaagacttttttaaggggcactattttatttttctctt
ctaaaTTCCATATGTTTTCTGGAACTTTTTTTaagagaaaatataatttt
gaaaatatgtgaCCCTTCCAGTCTGCTATTCTACCTTTGTTGTTTGAAAG
TGTTGAAATTGAAATCTGTTAAAACTAAATATTGCTACTAAGAATCTATA
TTATCTTgatgcatttaaaaaattataGTTTTCTAATGAAAATGTTCCAG
CTAGACAGAGGCTTGATAAAggaacaaaataaattttgtgtTATTTCTTT
CTAATTCTGAACTCTCCGCCCAGATTCACAGAAGGTTGTTGACAACACTG
AAAGTAATGTGAGAAgagatattattattattaattataaTAATTTTAAT
TGATTATGTAAATAAAGTGTTCcttattatttcttttctacATTTTTCTT
AGGTTTCAATTGCATAAAATTTATGACATATTTAGgattttttcttatat
tttatttCGCCTTAGTTTAGTTTTTGAATGAATTATTATGATAATGTTTT
CCTAATCCGATTGATGAACATTTCTAAAGTAATATCCTCGTAATGCTTTC
CAGCATCCATGTAGAACTTGTGTTTACAAAAAGTGGAAAGAAAAGTTGCT
GCTGTGATATAATTTTAATATGCTTTTGTTTCACTAGTTGTTGTTTTAAG
TGCTGGTTTTAGTCAATTTCTCACACGAAGAATGTCTCCAGAAGCAACAA
AAGTTGTTTCTGAATCTATAAAGTCCATAAGGTTTACCATCAAATTTCAA
TCCAGTAAGATatatgattttgtttttataatatgattgttttttccaaa
atatttataATTATAACATATAAAAAGGTCAGAGAAAAACGAAGAGAGTT
TATTTTCTTACATTATAATTGTCTTTTAGAATTTATCTGGTaaagtatta
ttattattactgtTAATGTTATTTTTCATTATGGTAGACCAGATATTTTG
TGTAGAAGGACTGTTAGGAATTTTAAATGCAATTTTTATTGATCATCGAT
TTTGTTTTGAGGCTGTGACAAGATTTTCGTAGTAATAATGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNATATTATTATAATTAATTATAATAATTTTAATTGATTAT
GTAAATAAAGTGTTCcttattatttcttttctacATTTTTCTTAGGTTTC
AATTGCATAAAATTTATGACATATTTAGgattttttcttatattttattt
CGCCTTAGTTTAGTTTTTGAATGAATTATTATGATAATGTTTTCCTAATC
CGATTGATGAACATTTCTAAAGTAATATCCTCGTAATGCTTTCCAGCATC
CATGTAGAACTTGTGTTTACAAAAAGTGGAAAGAAAAGTTGCTGCTGTGA
TATAATTTTAATATGCTTTTGTTTCACTAGTTGTTGTTTTAAGTGCTGGT
TTTAGTCAATTTCTCACACGAAGAATGTCTCCAGAAGCAACAAAAGTTGT
TTCTGAATCTATAAAGTCCATAAGGTTTACCATCAAATTTCAATCCAGTA
AGATANTGTCTCCAGAAGCAACAAAAGTTGTTTCTGAATCTATAAAGTCC
ATAAGGTTTACCATCAAATTTCAATCTAGTAAGATatatgattttgtttt
tataatatgattgttttttccaaaatatttataATTATAACATATAAAAA
GGTCAGAGAAAAACGAAGAGAGTTTATTTTCTTACATTATAATtgtcttt
tagaatttttctggtaaagtattattattattactgtTAATGTTATTTTT
CATTATGGTAGACCAGATATTTTGTGTAGAAGGACTGTTAGGAATTTTAA
ATGCAATTTTTATTGATCATCGATTTTGTTTTGAGGCTGTGACAAGATTT
TCGTAGTAAGAATGGTGTGCAGTGAATAGTGTGTCATAAAGATTAAATTT
TGAGTCCCATACATTAATATTTGTAAGCTGTAACTTTTTGTTCTTGAAAG
TTTTAGGGTCAGCGTGAATGTGTAAAAGGgctttggttgcgtgaatgtgt
gaattgaaaaaacttgcgtgaacttGAAAATCTGCTTTTTGATTGTGTGA
ATCTGTGCTATTTTTTGTGTAAATATTAcaactttctccttttttcaCCA
ATTATGAGCAAATTTTGGTTCTGCTGTGGGGGCCGCTAAATTGCAAAGTT
CCTACAGTTCTTTGTAACATAATGTATCAATATGATTTTGAATGTagaaa
taaattttattgtttgcAATTTTCTCTTCGTTGTTGTTGTAAAATTCTTT
CTGGTAAAATCTCCTGGATTCTACAAACTAAAAATGAATCAAACAAGCTG
TTAAAAAAAGTCAACTCCTATTAAGAAGATCTTTTTCTCTCatctttttt
gtgattttataaAGCTCTGTAAATTGtctatttcatttatttcaatTCCT
TTCTTCTGTTTGTTTATTTCACagactgaaaataaaaacaacaaacatcA
TGGAGGTCGACAAAGATGATTTCCTGGAGTTGGGAGTTCAAGAGAATGAT
TTGATTGATGATATTGAAATGTCAGATGACGAACTGAATGTCGAATTGGA
AATGCTGAATAAGCAAGAAAATGTTAAGTGGGAGATCAAAGCAGAAATTA
AGACGGAGGAAGGGGAGTATgcagaaaatcaaaatgaatttaaaacagaA
ATAAAGACAGAATTTGCAGAATGTGTCAAACATGAATCTGCAGAATGTGT
CAAACATGAATCTGCAGAATGTGTCAAACATGAATCAGATCAGCAAGACG
ATAAATATGCTAcaaacaagaaaataataaaagtaAGACCCTCTTCACCT
TCcacaaaaacaataaacaataaTAACAGACCCAAACAAAGGAACAGGGA
CGATTATGGGGACATTCAACTTGACAAGAAACGATTGTATAAGCCTTTAT
ATGTTGATAAAAACACTGACCCTGTTGTGGTGGGCCGAGAAATTTCATAT
CGTTTACAGGAAAAGAAATCGAACTTGATCAAAAATGTTGTAAGAGTAAT
CGGTATTTCAATGTCGGTGGAAGTATTTCAAGAAACAAAGAAGATAGTGA
AATCAGGTGGATTAAAAACAGATGATGGTCAGCGCAAACGTTCCCCTGGT
GGAACATATCTTTACATTCTCAAGAATCGAGGATACGCCTCAACTAcaca
aatgaaagaaatttttaaagttgAGAATGAACGGCACAAAGAGAAACGCA
AATATAaagcacaaaaattaaaaaatcatcaaaggAAATCAATCAAAGTG
GAAAAGCAGGATGAAAAGCCCAAAGCGAAAGTGGAAGAATGAATAATTGG
TTATTTTGAAATCATCTCAATGAGTACCCAAACTTTTCACCGCCCTGATC
TAGACCAAATAATATTCGGCTCATAGCATATTTTCtgcattctttttcaa
atgaCCACCTATACAATAAATAAGTAAAGCCCTCGGTTGTTTAGACCCAA
TTTAATAGTTATCCCTTACTATAAGATGGGTTTAAAATTTAGTtatcttt
tttaagttttaattagtttttgtaattattatacaGTTCAGTAGAGTTTT
TTTACAATTGACAAGAAATAAACTATTTGTTGCAGCTTAATGAAGCtgct
tttactttttt Coding sequence (CDS) from alignment at sc0000210:387310..392970+ >TCONS_00015330 ID=TCONS_00015330|Name=TCONS_00015330|organism=Clytia hemisphaerica|type=CDS|length=1608bp|location=Sequence derived from alignment at sc0000210:387310..392970+ (Clytia hemisphaerica)
ATGGATCATTTTCTAAATGAAGCAAAACGTCTGGTACAGCGGTTACAACA
CCATGACAATGCAgttgatattttgattggtgaaacaacaaatcttcaaa
ataaattgaTTGCTATGAGACAATATAAAGATGAAGTTGTTAAAATGAAT
CAATCTGCAAACCATCGACCGAAAAGTACACTGATTCTTGGCAGTCAGCT
TGAGAATCAAAGAATACAGAGCCTAGAACAGGAAAACCGAGAATTGAGCA
TTTCACTTGCAGAACATCAATCTGCACTTGAGTTGATTATGAATAAGTAC
AGAGAGCAAGTGGTGGTAATGATTAAAGCAAATGGAACAAACTTGGCTCT
GTCGCCAAGCTTTAGTCAACCAAGTGAAAAAGAACGCCAATTGAATGAAC
AGATTGCTGAAATGGCATATGTGATGAGACAATCCGCTTCCATTGATGAA
AATCATGCTGCTAAAGAAATTGAAACCATACGTAGCCTTCAAGTAGAGAA
CGACAACTTACGACAACTCCTACAAATTAGTGGTCAAAGTTTGAAACAGA
GCAATAATGAAACTCCACCTAATGATTCAGCTATTTCTTCACAAAGTTCC
TTAGCAACTCAACCACCAGTCCCAAAAATATCTCAAATGCAACATCAGTC
AATTGAAGAGGTTGATACAAAAGACAGTGGAATTTACGACGAAGAATATT
CTCCAAATTTTGACTTATTTaaaaagggaaagaaaaggAAACCTTTGAAT
ACATCAAGACATGTTGATAAATTGGAAAACCTTTTTAAGATGCCTTCAAC
TTTACATAAATCGCCAGCCCCGACTGAAATTGATATTCTTGAAAacagtt
ttgataaaaattctaCCAATGTGAAACTTGAGAAGGAAACTGAAAACCAA
TTAGAGGATTTGGATCAAACAGATCATCAAGAGGAAAAACAACATCAAAT
GTACACAGTAGAAGCACTCATTGAGAATAACATATCTGATAAAGATGATG
AAGACTTACAATTAACAAACGGACatttggaagaaaatttattgattgat
gATTTGGACGCTTTACTTGAGCAGGAGTTTGATGATGCGGATTTCGATTC
AGAACCTTCAGAATCTCATGAATCAAACTTGAACAATGATTTTAAAGATG
TcattttaaataattccttCCAAAAGAAAACAGATAGCTCTTCAAAATAC
AAAACACAGTTAGATGAAAGTGATGCattgaaatttttggatgaTGCGTT
GGATTCTTCTGAAGAATCTGATAATGACGACAATAACAAAGAATTGTGTG
CTGACACTATAAGTCTGAAGgaaaataacaattcaaaagtACATCATGAA
GAAAACTCTATATCTGATACTCATTCAACCTTGTTGAAGGAGGAAGCAGC
AGAAGCTCCAGATGAGATGGATGTTCTTGATTTTCTGGATAACTTCGATA
AAGAAATTGAGGATGATGATTGTAGTGAGACACAATCTGAAGCAGAATCT
GAGGTTACGATAATTGACACGAATCAGGAGGATGACACAATGGCATTGTT
TGATTCTGTTCTGGAGGATGACGATTCTCCACTCAGCGAGGATGAAGGGA
ATGACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015330-exon-sc0000210-1491911889:387310..389126 | TCONS_00015330-exon-sc0000210-1491911889:387310..389126 | Clytia hemisphaerica | exon |
| TCONS_00015330-exon-sc0000210-1510915933:387310..389126 | TCONS_00015330-exon-sc0000210-1510915933:387310..389126 | Clytia hemisphaerica | exon |
| TCONS_00015330-exon-sc0000210-1575043694:387310..389126 | TCONS_00015330-exon-sc0000210-1575043694:387310..389126 | Clytia hemisphaerica | exon |
| TCONS_00015330-exon-sc0000210-1491911889:391784..392970 | TCONS_00015330-exon-sc0000210-1491911889:391784..392970 | Clytia hemisphaerica | exon |
| TCONS_00015330-exon-sc0000210-1510915933:391784..392970 | TCONS_00015330-exon-sc0000210-1510915933:391784..392970 | Clytia hemisphaerica | exon |
| TCONS_00015330-exon-sc0000210-1575043694:391784..392970 | TCONS_00015330-exon-sc0000210-1575043694:391784..392970 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000210 | supercontig | sc0000210:387310..392970 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR008555 | SIKE |
Blast
BLAST of TCONS_00015330 vs. Swiss-Prot (Human)
Match: FGOP2 (FGFR1 oncogene partner 2 OS=Homo sapiens GN=FGFR1OP2 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.417e-36 Identity = 93/248 (37.50%), Postives = 141/248 (56.85%), Query Frame = 1
Query: 118 NITMDHFLNEAKRLVQRLQHHDNAVDILIGETTNLQNKLIAMRQYKDEVVKMNQSANHRPKSTLILGSQLENQRIQSLEQENRELSISLAEHQSALELIMNKYREQVVVMIKAN-----GTNLALSPSFS-------------------------QPSEKERQLN----------EQIAEMAYVMRQSASIDENHAAKEIETIRSLQVENDNLRQLLQISGQS---LKQSNNETPPNDSAISSQSSLA 732
+ T++ L +AK LV+RL+ HD+A + LI +TT L ++ AM+QY++E+ ++N+ A HRP+STL++G Q EN++I+ L+QEN+EL SL EHQSALELIM+KYREQ+ ++ A+ G + L S Q + R L +QI EMA VMR++ IDE KE E I L+ EN LR++LQI+ +S L++ + + SA+ + S L+
Sbjct: 2 SCTIEKALADAKALVERLRDHDDAAESLIEQTTALNKRVEAMKQYQEEIQELNEVARHRPRSTLVMGIQQENRQIRELQQENKELRTSLEEHQSALELIMSKYREQMFRLLMASKKDDPGIIMKLKEQHSKIDMVHRNKSEGFFLDASRHILEAPQHGLERRHLEANQNELQAHVDQITEMAAVMRKAIEIDEQQGCKEQERIFQLEQENKGLREILQITRESFLNLRKDDASESTSLSALVTNSDLS 249
The following BLAST results are available for this feature:
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