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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015224 ID=TCONS_00015224|Name=TCONS_00015224|organism=Clytia hemisphaerica|type=transcript|length=3433bp
TTTTAGATTACAAAATAAAACAGGAtttctaaaagaaaataaaaaatatt
aaaataaaaataacaacaacaaaatgcCACACGATCGAAAACCAGGACCT
AGAAGAAAAAAGTTGGTAATTTCGTTTGATGATAAAAACAGAAGtgaatA
TTTGACTGGGTTTCAAAAGCGAAAACAGCAACGAAGATTAAAAGCACAAA
ATGATATTGAGAAAAAGTTGAAGCAAAAAGTCCGAGATGAAAGGAATAAG
ATGGTGCTGATGAATTAACCAAGGACCAAGAGGATACAGTCAGTCAATCA
GCTACAGAAAAAGTCGAATTTGAAAACCACGAAGTCTTTGTCAATACTGA
TCTAAATTTTGCTGATAGTGGATTTCTCATTGAAAACACACAGGAGCGAG
AAGAAGAGAACTCTGAGCAACAACAAGCTGAAGATCAACAAGAAGTTGAA
ACTGCCCAATCAAAGAAGAAGGACAATAAGAGAAAGATAGTAAATGAAAG
AATTGGAAagcagaaaaagaagaaaacacgAAAGGTTTGAACAAGCACAG
AAATGATAATGAAAATCATCATCTTTTGATGGTTTGGTTGGCATCCTGGT
TTCAGATCTGGATCTTCAGAAAATCAATTCCTTGAAAGATTATGATTGGG
TACATGCATCCAGATCCGAAAGAAAATCTCTCTTGAATTATAGTGTTCCA
TTGTGTATGGTTCAGCCACTGGCCCTCTAACATACCCTTGAAACGCTAAT
GGTGCCACTACTCGATGTGGATGAAAAGATTGTTTTAATagaaaatttca
tcgaatagaccttatcgaagagatttttctaaaaaagcgatgtattgtgg
gattgtttcgggggggggttacaatagaaatctcttaggaattcctcgag
ggaattctattgtaatacccccgaaacaatccaaccatgcatcgctgttt
taaaaaaatcaaaaactccgataaggtctattatcgACGTATAAAGAACT
AGCTTACAATTGCGacacattttttcatgctgGCACAAACTTAacttata
ttattattattacagtCATTTCTCTCTANtttagaaaaatcaaaaactcc
gataagatctattataGATTAACCTATATCCAGCAGTGCTACTATTAGGG
TACTCTACTTTTCTCAAAGATATGGATATAGCTTTGTCAAGGGTTTGTAA
ATGTCGTTGGGTTCCGCTGATATTGTCAGTATTGAAAATAGAACCAAAAC
AATAACCAAACCCATGGAAAAGGGATAATTTCCTGTGGCAACAGGAAGAA
ATATAATGTAGTGGTGCGATGGAATACTCGTTTAACAGACATGCATGTAT
ATTACTTTTGGACTTTGGTTTTCGGTACCGTAGCAAAGACACATCCAGTT
TTCTTTGGTGCTCCCTTCGTATGTAAATAATTTAAGGGTACATGCACAca
atagcaaaactgcttcgctcatgtatattctaAACGATTTGCTAAATGTA
ACTAAATGACAATATAGGAATACTTGAAGGTTGCATAAGTTTTGGGGAAA
TCTTGATCATACTCTtgttttaaaaaagagaaattatGTCATGGTTTCTG
CCTACCATCTTagtccccccttaaaatgcaattttcccCTTATCAATTTA
TCCCCCCTTAGAATTGTAAACTAAAATTAGTGCCCCTTAGACGGAATTGT
CACCCAGATAACATAATTCTTTCCAACCTGTAAAACTAGCTATCAAGGAG
TTTTTAAACTATTTGAGGCGATCTTTTTGCACTGTTTTGCTATTTATAAT
TCATTCCATGTTGAAAAACAtgagaaattttggaaaattagaAACAATCC
CCTTGAGGGTTTGGAAAGGTCAAAGTACCCTTTATGAAACTCCCTCCTTA
TTTTGAAAATCCCCCTTAATTTTTAAAGGcattttttcccccccccccca
ccttattttaaggggggagCAGAAACCATGATTGTCTGGAATCGTTTTCT
GCAATCTTTTGAATGCTCTTTTGAAAATCCCCCTTAATTTTTAAAGGcat
tttttccccccccccccaccttattttaaggggggagCAGAAACCATGAT
TGTCTGGAATCGTTTTCTGCAATCTTTTGAATGCTCTTTTGAAAATCCCC
CTTAATTTTTAAAGGcattttttccccccccccccaccttattttaaggg
gggagCAGAAACCATGATTGTCTGGAATCGTTTTCTGCAATCTTTTGAAT
GCTCTTTTGAAAATCCCCCTTAATTTTTAAAGGcattttttccccccccc
cccaccttattttaaggggggagCAGAAACCATGATTGTCTGGAATCGTT
TTCTGCAATCTTTTGAATGCTCTTTTGAAAATCCCCCTTAATTTTTAAAG
GcattttttccccccccccccaccttattttaaggggggagCAGAAACCA
TGATTGTCTGGAATCGTTTTCTGCAATCTTTTGAATGCTCTTTTGAAAAT
CCCCCTTAATTTTTAAAGGcattttttccccccccccccaccttatttta
aggggggagCAGAAACCATGATTGTCTGGAATCGTTTTCTGCAatctttt
gaatgctaaaaataatATGTATCCAcgtattttaaaagttttcgatgcaa
tttttttaaataaatagcGTTGCTATGACAATATTTGtagtatttatttt
tcaagCAATTACTGATGTAAAACCATTTGGTGTAGCTCTTCATGATAttc
accattgcaatgtcttctaacattacatcacggacccaataactgattgg
ttgaaagtgacgtaaaatcagccaatacgtcactttcaaccaatcagctg
ttgtgtccgtggaagacattgcaatggtgcatatcatgaatttacaATAT
TGATCAGCTTTTGAGGTTGAATAGAACATCATAGGTATCTTCCATATAGT
TTATGTATCCGAGGAGGACGGTATagagcaaagttgacatgtctccaaaa
tcaccgtccactttgctcgacgacggtaaaaacaccaagataccgtcgtc
tgtttaggtgagcaaaggcgatatagagccgtacatcaactatcgacttt
gttttgtatcatttcacttaccgtcgccctcgatatcctccgttacataa
actcggtattgatAAGCTTTTGAGGTTGAATAGAACATCATAGGTATCTT
CCATATCTTTATTGTTAACTAACTTCTAGTTTTGATCATTATATTCTTTC
TCTTCTATACTTCATACGCTAGCTATTATTTTTTTGTAGTTGGAAAGATA
GAAAAAGTTTTGCAGTGGTGGTAAGGGATAATGGTATATTTATTTAGCTT
TATTATTTTCTACATTCAAATAATGTTTCTATGATAAAGATTTTTCATCA
GAATACCTGCTGAACCTTTTTCTGAAGGATGTG Run BLAST on NCBI transcript from alignment at sc0000205:201858..208149- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015224 ID=TCONS_00015224|Name=TCONS_00015224|organism=Clytia hemisphaerica|type=transcript|length=6292bp|location=Sequence derived from alignment at sc0000205:201858..208149- (Clytia hemisphaerica)
TTTTAGATTACAAAATAAAACAGGATTTCTAAAAGAAAATAAAAAATATT
AAAATAAAAATAACAACAACAAAATGCCACACGATCGAAAACCAGGACCT
AGAAGAAAAAAGTTGGTAATTTCGTTTGATGATAAAAACAGAAGGTACAA
AATTTATACTTTTTCCTTGTATGTTATATAAATTTGAAGCCATTTTTTCA
AGTTTGAATTTTAAAAACAATCAAGTGATATGTTTCAGTGTTATCACCAT
TCTCAAGTTTATTTTTTATAAGAGCTTGGAGATGGTTGTTACACCGATAT
CGCTTGATTGTTTTTGAATTTTAAGCTTATACCTTTTCGATTAAATTTGT
ATTTTTCGATGTTTGTGTGCATGCTTTTTTTATAAGAACACGAAAACGCT
GAAAATTGGTCCAAACCTAAGAAAAAATTAAAGACAAGCTGAGCCCCAGA
TTTCATAAATTGCTAAGACAGTACTGATGTTAACAGATTTTTAAGCAAAG
AAACTGAGCGTATTAAGAATAGCGCCAGAAACATGAGCCAGAAAATTCAA
AAAAAAAAACAACAGTCCTGTCTGAGACAAAACGTACTGGTTCTTATGAA
TGAAAGCGATGAATTTGGAGAAGAATTTGAGAAGAACATCAGTTGTTGTA
GAAGTTGATAGGAATAATCAAGAGACTTTTCAATGAAACTTTTATACTAC
GGCTAACATTGACTAAAAGAGTACGAAAGAGATTCCGAATAGTGAATTCA
TTATCATAATCTTGATCAGAAAATTGACAACGAATTGATGTTTGATAAAA
TATCTATATTTCGAGCATAACTTCACTCATCTTTCAGGATTGTAAAATGT
AAAATTACAAAGTTGCTACTTATGTGCTCTTTCGTACTCTTTTATTTGAA
GTTATCAGCTGGTAATGGTTTTTGAACATTGACTAATTAGTCAGTGAATG
TATTTAACTGCCACCTTTGTTCAGACCATAATAATTTGATTTTTTTTTCA
GTGAATATTTGACTGGGTTTCAAAAGCGAAAACAGCAACGAAGATTAAAA
GCACAAAATGATATTGAGAAAAAGTTGAAGCAAAAAGTCCGAGATGAAAG
GAATAAGGTAAATTTTATATCTGCAGAATTTAATTAGTAAATACTACATT
ATTCACACATAACAATGGTCTTTTTCTATCTCACCATGGATAATCCTACC
TTTTTGGGGGAAATTAGTTAAATTAAACAAAAAATCTTCACAATGACCTT
CCTAGGATCCAAATCCGTCCTAAATTTGACATGTTTATACATCAAACAAA
AAGTTGGCCTATATCTTTATTGCTAAATAAATTTTCCACCTGAAACATTT
TACCATCAAGCAAAAGTTGGCCTATATCTCTATTGCTCAATAAATTTTCC
ACTTGAAACATTTTACCATCAAGATATGTTTCATATTTTTACATTGTAAT
TGCTTTTGAAATAGGTTTTTTGTAATTTTGCTTTATTAAAACATCCATCT
TTTCTAGAAACGTAAAGCCATGAAAGAAAAAGCAGAAGAAATCTTATCGG
GTGTTTGTAAGTTTTAGAAGATTTTTCAATTTCAACCATTCAGGTTTCAT
TGTTGATGTTGCTGTTGTCTCCTTTCTGGATTATTTCCTTAATATTAAGG
CGTTATCTTAACGTTTGATTTGATGGAAATGNCTCTCTATTCTGGATTAT
TTCATTAATATGAAAGGCCGGTCTCCACTTTTACTAACACTTTTTAATTT
TTTTCAACCGTTACGTCAGATCGCGCCAATGGAGTTGCTTCATTTTTCTT
TTGACCAATAGAGTGGAAGCTTTGCTCGAAAAAGTGCGATTTCAGCGCGC
GCAAGTGGAGACCGGCCTTAAAGCAATGACTCATCTAAACTTATAATTTG
ATGGAAACGCAGTGAACATTATAGCTTTAATAATCACCATATAAAGGTTG
TTTATTCGATACTATGCCAGTACCAACACTGCAAATATGTATCTGATACT
CAAATAAGCATCCCCTAGTCTAACTGAACTTGAAAAATTACTTGAACTGT
ATTGCTCCAGGCTTTGCTATTCAAGCTCTGGTTTAGGCGCCCTGGGCGGT
CCACTTTTCAGCCTGCTTATTTTAATTATGAGTCAAAGTGCAGTCAATGC
ATTTTCCTCTTTTAAACTCAATGTAATGACTTCTACCAATACTTTTCAGG
CGAAAATTTCAACTGTCAAGTTTCTGCAAACTTTTTACCTACTCTAACAG
AAAGTTTGACCTCTAAACTAGAGCTAAGGAGTAGTTGGAATGCTCTATCA
CTATCGTCAACATGAAAAATGGTTCAGAGTTTTCTATATATTCCTCGTCT
AAAGACTCGGAAAATATGAAGAAAAATTTGAACTCGAAAAATATATCCCA
TAATATGGGTACTTCTGGTACCATGCGATAACTATTAGACGGCCAAATGC
GATATTTTTAATGGGAAAAGAAATCTAATCCTAAAACAAAATAATCACAC
CAAAACATCGTAAAAGGGCTAGTTTAGTTGACTGAAAAATATTTTCTACT
CAAATCAAGTGTACACAGAGAAATTCGACATCATCTAACTTTGTTCGCAA
TTCGACGACTTGTCTGTACACAAACCCAATATCTACGGCAAATTTCAAAA
TTCACTACGCTACGATAATCGTGAGATACACTCTGGTACAGAGTATTCGA
CGACATGACTCTTCTTATTGTTATTCAACTTCCATTTCTTCAGATGGTGC
TGATGAATTAACCAAGGACCAAGAGGATACAGTCAGTCAATCAGCTACAG
AAAAAGTCGAATTTGAAAACCACGAAGTCTTTGTCAATACTGATCTAAAT
TTTGCTGATAGTGGATTTCTCATTGAAAACACACAGGTTTAGTTTGCAGC
TTACTTTTACTTTGGTACTTTGAGACATGACCTTTGGTAAAGGTGAAAAT
CTGTTAGGACAATCATATCAAAGACAAATCTCTGTATCAATGGTATATTT
GGCAACAGCCCTTCGTTTTAAGAAACTCTTAAAGGTTGAAAAATAAGATA
CTAAGATGAGTAACCAACGATTTAAAGTTGGACAATAGTTTTCGATAATT
TGATTGATTATCATTTTCAAGTCTAAAAACGATCACGAATCAAAGCACGC
TAAAATATTTAAAAGATTAAAATCTACAACCATACAGTAAGTAAAAAGCA
TGAAGATTAAGAATGAAAGAAGATGATAAATGTGTTTTATTATTCATTTA
AGGAGCGAGAAGAAGAGAACTCTGAGCAACAACAAGCTGAAGATCAACAA
GAAGTTGAAACTGCCCAATCAAAGAAGAAGGACAATAAGAGAAAGATAGT
AAATGAAAGAATTGGAAAGCAGAAAAAGAAGAAAACACGAAAGGTTTGAA
CAAGCACAGAAATGATAATGAAAATCATCATCTTTTGATGGTTTGGTTGG
CATCCTGGTTTCAGATCTGGATCTTCAGAAAATCAATTCCTTGAAAGATT
ATGATTGGGTACATGCATCCAGATCCGAAAGAAAATCTCTCTTGAATTAT
AGTGTTCCATTGTGTATGGTTCAGCCACTGGCCCTCTAACATACCCTTGA
AACGCTAATGGTGCCACTACTCGATGTGGATGAAAAGATTGTTTTAATAG
AAAATTTCATCGAATAGACCTTATCGAAGAGATTTTTCTAAAAAAGCGAT
GTATTGTGGGATTGTTTCGGGGGGGGGTTACAATAGAAATCTCTTAGGAA
TTCCTCGAGGGAATTCTATTGTAATACCCCCGAAACAATCCAACCATGCA
TCGCTGTTTTAAAAAAATCAAAAACTCCGATAAGGTCTATTATCGACGTA
TAAAGAACTAGCTTACAATTGCGACACATTTTTTCATGCTGGCACAAACT
TAACTTATATTATTATTATTACAGTCATTTCTCTCTANTTTAGAAAAATC
AAAAACTCCGATAAGATCTATTATAGATTAACCTATATCCAGCAGTGCTA
CTATTAGGGTACTCTACTTTTCTCAAAGATATGGATATAGCTTTGTCAAG
GGTTTGTAAATGTCGTTGGGTTCCGCTGATATTGTCAGTATTGAAAATAG
AACCAAAACAATAACCAAACCCATGGAAAAGGGATAATTTCCTGTGGCAA
CAGGAAGAAATATAATGTAGTGGTGCGATGGAATACTCGTTTAACAGACA
TGCATGTATATTACTTTTGGACTTTGGTTTTCGGTACCGTAGCAAAGACA
CATCCAGTTTTCTTTGGTGCTCCCTTCGTATGTAAATAATTTAAGGGTAC
ATGCACACAATAGCAAAACTGCTTCGCTCATGTATATTCTAAACGATTTG
CTAAATGTAACTAAATGACAATATAGGAATACTTGAAGGTTGCATAAGTT
TTGGGGAAATCTTGATCATACTCTTGTTTTAAAAAAGAGAAATTATGTCA
TGGTTTCTGCCTACCATCTTAGTCCCCCCTTAAAATGCAATTTTCCCCTT
ATCAATTTATCCCCCCTTAGAATTGTAAACTAAAATTAGTGCCCCTTAGA
CGGAATTGTCACCCAGATAACATAATTCTTTCCAACCTGTAAAACTAGCT
ATCAAGGAGTTTTTAAACTATTTGAGGCGATCTTTTTGCACTGTTTTGCT
ATTTATAATTCATTCCATGTTGAAAAACATGAGAAATTTTGGAAAATTAG
AAACAATCCCCTTGAGGGTTTGGAAAGGTCAAAGTACCCTTTATGAAACT
CCCTCCTTATTTTGAAAATCCCCCTTAATTTTTAAAGGCATTTTTTCCCC
CCCCCCCCACCTTATTTTAAGGGGGGAGCAGAAACCATGATTGTCTGGAA
TCGTTTTCTGCAATCTTTTGAATGCTCTTTTGAAAATCCCCCTTAATTTT
TAAAGGCATTTTTTCCCCCCCCCCCCACCTTATTTTAAGGGGGGAGCAGA
AACCATGATTGTCTGGAATCGTTTTCTGCAATCTTTTGAATGCTCTTTTG
AAAATCCCCCTTAATTTTTAAAGGCATTTTTTCCCCCCCCCCCCACCTTA
TTTTAAGGGGGGAGCAGAAACCATGATTGTCTGGAATCGTTTTCTGCAAT
CTTTTGAATGCTCTTTTGAAAATCCCCCTTAATTTTTAAAGGCATTTTTT
CCCCCCCCCCCCACCTTATTTTAAGGGGGGAGCAGAAACCATGATTGTCT
GGAATCGTTTTCTGCAATCTTTTGAATGCTCTTTTGAAAATCCCCCTTAA
TTTTTAAAGGCATTTTTTCCCCCCCCCCCCACCTTATTTTAAGGGGGGAG
CAGAAACCATGATTGTCTGGAATCGTTTTCTGCAATCTTTTGAATGCTCT
TTTGAAAATCCCCCTTAATTTTTAAAGGCATTTTTTCCCCCCCCCCCCAC
CTTATTTTAAGGGGGGAGCAGAAACCATGATTGTCTGGAATCGTTTTCTG
CAATCTTTTGAATGCTAAAAATAATATGTATCCACGTATTTTAAAAGTTT
TCGATGCAATTTTTTTAAATAAATAGCGTTGCTATGACAATATTTGTAGT
ATTTATTTTTCAAGCAATTACTGATGTAAAACCATTTGGTGTAGCTCTTC
ATGATATTCACCATTGCAATGTCTTCTAACATTACATCACGGACCCAATA
ACTGATTGGTTGAAAGTGACGTAAAATCAGCCAATACGTCACTTTCAACC
AATCAGCTGTTGTGTCCGTGGAAGACATTGCAATGGTGCATATCATGAAT
TTACAATATTGATCAGCTTTTGAGGTTGAATAGAACATCATAGGTATCTT
CCATATAGTTTATGTATCCGAGGAGGACGGTATAGAGCAAAGTTGACATG
TCTCCAAAATCACCGTCCACTTTGCTCGACGACGGTAAAAACACCAAGAT
ACCGTCGTCTGTTTAGGTGAGCAAAGGCGATATAGAGCCGTACATCAACT
ATCGACTTTGTTTTGTATCATTTCACTTACCGTCGCCCTCGATATCCTCC
GTTACATAAACTCGGTATTGATAAGCTTTTGAGGTTGAATAGAACATCAT
AGGTATCTTCCATATCTTTATTGTTAACTAACTTCTAGTTTTGATCATTA
TATTCTTTCTCTTCTATACTTCATACGCTAGCTATTATTTTTTTGTAGTT
GGAAAGATAGAAAAAGTTTTGCAGTGGTGGTAAGGGATAATGGTATATTT
ATTTAGCTTTATTATTTTCTACATTCAAATAATGTTTCTATGATAAAGAT
TTTTCATCAGAATACCTGCTGAACCTTTTTCTGAAGGATGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015224-exon-sc0000205-1575043694:208006..208149 | TCONS_00015224-exon-sc0000205-1575043694:208006..208149 | Clytia hemisphaerica | exon |
| TCONS_00015224-exon-sc0000205-1575043694:207043..207148 | TCONS_00015224-exon-sc0000205-1575043694:207043..207148 | Clytia hemisphaerica | exon |
| TCONS_00015224-exon-sc0000205-1575043694:205264..205406 | TCONS_00015224-exon-sc0000205-1575043694:205264..205406 | Clytia hemisphaerica | exon |
| TCONS_00015224-exon-sc0000205-1575043694:201858..204897 | TCONS_00015224-exon-sc0000205-1575043694:201858..204897 | Clytia hemisphaerica | exon |
| TCONS_00015224-exon-sc0000205-1510915933:208006..208149 | TCONS_00015224-exon-sc0000205-1510915933:208006..208149 | Clytia hemisphaerica | exon |
| TCONS_00015224-exon-sc0000205-1510915933:207043..207148 | TCONS_00015224-exon-sc0000205-1510915933:207043..207148 | Clytia hemisphaerica | exon |
| TCONS_00015224-exon-sc0000205-1510915933:205264..205406 | TCONS_00015224-exon-sc0000205-1510915933:205264..205406 | Clytia hemisphaerica | exon |
| TCONS_00015224-exon-sc0000205-1510915933:201858..204897 | TCONS_00015224-exon-sc0000205-1510915933:201858..204897 | Clytia hemisphaerica | exon |
| TCONS_00015224-exon-sc0000205-1491911889:208006..208149 | TCONS_00015224-exon-sc0000205-1491911889:208006..208149 | Clytia hemisphaerica | exon |
| TCONS_00015224-exon-sc0000205-1491911889:207043..207148 | TCONS_00015224-exon-sc0000205-1491911889:207043..207148 | Clytia hemisphaerica | exon |
| TCONS_00015224-exon-sc0000205-1491911889:205264..205406 | TCONS_00015224-exon-sc0000205-1491911889:205264..205406 | Clytia hemisphaerica | exon |
| TCONS_00015224-exon-sc0000205-1491911889:201858..204897 | TCONS_00015224-exon-sc0000205-1491911889:201858..204897 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000205 | supercontig | sc0000205:201858..208149 - |
Blast
The following BLAST results are available for this feature:
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