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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015109 ID=TCONS_00015109|Name=TCONS_00015109|organism=Clytia hemisphaerica|type=transcript|length=1102bp
gtgaaatttgaaaaactgtAATAATTGTTACTTGTATTTCCGATTTGAGG
CAtttgaaaaaagtaatttgGTAAAATAATCTAATAATCTTTCTAAAAAA
GTAAAACCTGGACTTAAAAGATTTTCGTTTTCAATATACGTTGAAACAAT
GTACTTTGCCAACCTCTTGCCCGTGTATCCCATGCTTTATTACTTTTACT
TATGAACGCCAGAGATTATTATCTGGATTTaacagtaagcataaaaaaaa
gccaataatacgcagggaacgaggttggtacTGCTTGGCAACCATGTGAA
CACTAAAACATACCCAGGGTACTGTTCTCGCAACCATGTGAACACTAAAA
CATACCCAGAGTACTGTTCTCGCTCATCTCTTTCGCCTCATCTTCTCTTT
TCTTATATACAGCCAACaaatgtttcttttgtttcggTAACTCGCTATCC
CACACCAAACAATACCCAtccaaattttctttattaTCTTTTTGAACAGT
ATAAGGACTTGACCAGGGCCAGAATCCCTGACCAGAGGTGACCACGGATT
GAGAGCCACCACCGAGTCGTGGACACACTGTGATTGATCGAACCGTGGAT
TTACTTCTTGAAATAATGTTCAAAGGTTctacattttttgttttgtttgt
atcAAGAATGATAACGTGTCCGCTTTCCGTGCCAATCCAGATATTAGAGC
TCTCCACGATTGCCATGCTTATAGGGCGGCAGTCACGAGGCGTTAGGGTT
GCGTATTCTTTCTGTAAAATCTCATGGCAGTCAATTACATCTGTGATGCA
GGTAGAAATAAACAATTTGGATGTTTCGTACACTTTGATTTGGTGGTCTT
CACGACACGTCACAAAAACACGTTTCTTTGTGACGGTTAACGCGGACACT
ATGTTGGGGGCTTTTGATCCGACATTTATTTGACGTACAACACGGCCAGA
ATCCATACGTAATTCTAAAAGCGATTGCCCGTAACCACATAATAAGGTAT
TTCCGAGTGTAGCTAGACATGCGATTGGTCCTTTTGGGATTTCGGCATCA
ATCTTGATGGGAGCGTTGGAGGCGTTGTAAGGGTTTTCACGATCGTAATC
TA Run BLAST on NCBI transcript from alignment at sc0000204:279812..280955+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015109 ID=TCONS_00015109|Name=TCONS_00015109|organism=Clytia hemisphaerica|type=transcript|length=1144bp|location=Sequence derived from alignment at sc0000204:279812..280955+ (Clytia hemisphaerica)
gtgaaatttgaaaaactgtAATAATTGTTACTTGTATTTCCGATTTGAGG
CAtttgaaaaaagtaatttgGTAAAATAATCTAATAATCTTTCTAAAAAA
GTAAAACCTGGACTTAAAAGATTTTCGTTTTCAATATACGTTGAAACAAT
GTACTTTGCCAACCTCTTGCCCGTGTATCCCATGCTTTATTACTTTTACT
TATGAACGCCAGAGATTATTATCTGGATTTaacagtaagcataaaaaaaa
gccaataatacgcagggaacgaggttggtacTGCTTGGCAACCATGTGAA
CACTAAAACATACCCAGGGTACTGTTCTCGCAACCATGTGAACACTAAAA
CATACCCAGGGTACTGTTCTCGCAACCATGTGAACACTAAAACATACCCA
GAGTACTGTTCTCGCTCATCTCTTTCGCCTCATCTTCTCTTTTCTTATAT
ACAGCCAACaaatgtttcttttgtttcggTAACTCGCTATCCCACACCAA
ACAATACCCAtccaaattttctttattaTCTTTTTGAACAGTATAAGGAC
TTGACCAGGGCCAGAATCCCTGACCAGAGGTGACCACGGATTGAGAGCCA
CCACCGAGTCGTGGACACACTGTGATTGATCGAACCGTGGATTTACTTCT
TGAAATAATGTTCAAAGGTTctacattttttgttttgtttgtatcAAGAA
TGATAACGTGTCCGCTTTCCGTGCCAATCCAGATATTAGAGCTCTCCACG
ATTGCCATGCTTATAGGGCGGCAGTCACGAGGCGTTAGGGTTGCGTATTC
TTTCTGTAAAATCTCATGGCAGTCAATTACATCTGTGATGCAGGTAGAAA
TAAACAATTTGGATGTTTCGTACACTTTGATTTGGTGGTCTTCACGACAC
GTCACAAAAACACGTTTCTTTGTGACGGTTAACGCGGACACTATGTTGGG
GGCTTTTGATCCGACATTTATTTGACGTACAACACGGCCAGAATCCATAC
GTAATTCTAAAAGCGATTGCCCGTAACCACATAATAAGGTATTTCCGAGT
GTAGCTAGACATGCGATTGGTCCTTTTGGGATTTCGGCATCAATCTTGAT
GGGAGCGTTGGAGGCGTTGTAAGGGTTTTCACGATCGTAATCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015109-exon-sc0000204-1491911889:279812..280106 | TCONS_00015109-exon-sc0000204-1491911889:279812..280106 | Clytia hemisphaerica | exon |
| TCONS_00015109-exon-sc0000204-1510915933:279812..280106 | TCONS_00015109-exon-sc0000204-1510915933:279812..280106 | Clytia hemisphaerica | exon |
| TCONS_00015109-exon-sc0000204-1575043694:279812..280106 | TCONS_00015109-exon-sc0000204-1575043694:279812..280106 | Clytia hemisphaerica | exon |
| TCONS_00015109-exon-sc0000204-1491911889:280149..280955 | TCONS_00015109-exon-sc0000204-1491911889:280149..280955 | Clytia hemisphaerica | exon |
| TCONS_00015109-exon-sc0000204-1510915933:280149..280955 | TCONS_00015109-exon-sc0000204-1510915933:280149..280955 | Clytia hemisphaerica | exon |
| TCONS_00015109-exon-sc0000204-1575043694:280149..280955 | TCONS_00015109-exon-sc0000204-1575043694:280149..280955 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000204 | supercontig | sc0000204:279812..280955 + |
Blast
The following BLAST results are available for this feature:
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